"sequence_id","alias","species","description","type" "AT1G01190","CYP78A8","Arabidopsis thaliana","cytochrome P450, family 78, subfamily A, polypeptide 8","protein_coding" "AT1G01200","RABA3","Arabidopsis thaliana","RAB GTPase homolog A3","protein_coding" "AT1G01220","AtFKGP","Arabidopsis thaliana","L-fucokinase/GDP-L-fucose pyrophosphorylase","protein_coding" "AT1G01280","CYP703A2","Arabidopsis thaliana","cytochrome P450, family 703, subfamily A, polypeptide 2","protein_coding" "AT1G01340","ATCNGC10","Arabidopsis thaliana","cyclic nucleotide gated channel 10","protein_coding" "AT1G01360","RCAR1","Arabidopsis thaliana","regulatory component of ABA receptor 1","protein_coding" "AT1G01600","CYP86A4","Arabidopsis thaliana","cytochrome P450, family 86, subfamily A, polypeptide 4","protein_coding" "AT1G01710","No alias","Arabidopsis thaliana","Acyl-CoA thioesterase family protein","protein_coding" "AT1G01910","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT1G02130","ATRAB1B","Arabidopsis thaliana","RAS 5","protein_coding" "AT1G02280","PPI1","Arabidopsis thaliana","translocon at the outer envelope membrane of chloroplasts 33","protein_coding" "AT1G02430","ATARFD1B","Arabidopsis thaliana","ADP-ribosylation factor D1B","protein_coding" "AT1G02440","ARFD1A","Arabidopsis thaliana","ADP-ribosylation factor D1A","protein_coding" "AT1G02670","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT1G03030","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT1G03070","No alias","Arabidopsis thaliana","Bax inhibitor-1 family protein","protein_coding" "AT1G03110","AtTRM82","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G03830","No alias","Arabidopsis thaliana","guanylate-binding family protein","protein_coding" "AT1G04140","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein","protein_coding" "AT1G04510","MAC3A","Arabidopsis thaliana","MOS4-associated complex 3A","protein_coding" "AT1G05120","No alias","Arabidopsis thaliana","Helicase protein with RING/U-box domain","protein_coding" "AT1G05160","ATKAO1","Arabidopsis thaliana","cytochrome P450, family 88, subfamily A, polypeptide 3","protein_coding" "AT1G05810","ARA-1","Arabidopsis thaliana","RAB GTPase homolog A5E","protein_coding" "AT1G05910","No alias","Arabidopsis thaliana","cell division cycle protein 48-related / CDC48-related","protein_coding" "AT1G06400","ATRABA1A","Arabidopsis thaliana","Ras-related small GTP-binding family protein","protein_coding" "AT1G06840","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G07190","No alias","Arabidopsis thaliana","BEST Arabidopsis thaliana protein match is: lon protease 1 (TAIR:AT5G26860.1); Has 106 Blast hits to 106 proteins in 47 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi - 11; Plants - 56; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).","protein_coding" "AT1G07200","No alias","Arabidopsis thaliana","Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT1G07410","RABA2b","Arabidopsis thaliana","RAB GTPase homolog A2B","protein_coding" "AT1G07650","No alias","Arabidopsis thaliana","Leucine-rich repeat transmembrane protein kinase","protein_coding" "AT1G08130","ATLIG1","Arabidopsis thaliana","DNA ligase 1","protein_coding" "AT1G08190","ATVPS41","Arabidopsis thaliana","vacuolar protein sorting 41","protein_coding" "AT1G08410","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT1G08600","CHR20","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT1G09180","ATSAR1","Arabidopsis thaliana","secretion-associated RAS super family 1","protein_coding" "AT1G09620","No alias","Arabidopsis thaliana","ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases","protein_coding" "AT1G09630","ATRABA2A","Arabidopsis thaliana","RAB GTPase 11C","protein_coding" "AT1G09970","LRR XI-23","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT1G10580","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G10630","ATARFA1F","Arabidopsis thaliana","ADP-ribosylation factor A1F","protein_coding" "AT1G10850","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G11100","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "AT1G11160","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G11600","CYP77B1","Arabidopsis thaliana","cytochrome P450, family 77, subfamily B, polypeptide 1","protein_coding" "AT1G11610","CYP71A18","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 18","protein_coding" "AT1G11680","CYP51G1","Arabidopsis thaliana","CYTOCHROME P450 51G1","protein_coding" "AT1G11930","No alias","Arabidopsis thaliana","Predicted pyridoxal phosphate-dependent enzyme, YBL036C type","protein_coding" "AT1G12220","RPS5","Arabidopsis thaliana","Disease resistance protein (CC-NBS-LRR class) family","protein_coding" "AT1G12420","ACR8","Arabidopsis thaliana","ACT domain repeat 8","protein_coding" "AT1G12460","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G12740","CYP87A2","Arabidopsis thaliana","cytochrome P450, family 87, subfamily A, polypeptide 2","protein_coding" "AT1G12805","No alias","Arabidopsis thaliana","nucleotide binding","protein_coding" "AT1G12910","LWD1","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G13080","CYP71B2","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 2","protein_coding" "AT1G13090","CYP71B28","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 28","protein_coding" "AT1G13100","CYP71B29","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 29","protein_coding" "AT1G13110","CYP71B7","Arabidopsis thaliana","cytochrome P450, family 71 subfamily B, polypeptide 7","protein_coding" "AT1G13140","CYP86C3","Arabidopsis thaliana","cytochrome P450, family 86, subfamily C, polypeptide 3","protein_coding" "AT1G13150","CYP86C4","Arabidopsis thaliana","cytochrome P450, family 86, subfamily C, polypeptide 4","protein_coding" "AT1G13710","KLU","Arabidopsis thaliana","cytochrome P450, family 78, subfamily A, polypeptide 5","protein_coding" "AT1G13870","DRL1","Arabidopsis thaliana","calmodulin binding;purine nucleotide binding","protein_coding" "AT1G14000","VIK","Arabidopsis thaliana","VH1-interacting kinase","protein_coding" "AT1G14390","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G14610","VALRS","Arabidopsis thaliana","valyl-tRNA synthetase / valine--tRNA ligase (VALRS)","protein_coding" "AT1G14830","DRP1C","Arabidopsis thaliana","DYNAMIN-like 1C","protein_coding" "AT1G15310","SRP54-1","Arabidopsis thaliana","signal recognition particle 54 kDa subunit","protein_coding" "AT1G15340","MBD10","Arabidopsis thaliana","methyl-CPG-binding domain 10","protein_coding" "AT1G15440","PWP2","Arabidopsis thaliana","periodic tryptophan protein 2","protein_coding" "AT1G15470","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G15850","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G15990","CNGC7","Arabidopsis thaliana","cyclic nucleotide gated channel 7","protein_coding" "AT1G16400","CYP79F2","Arabidopsis thaliana","cytochrome P450, family 79, subfamily F, polypeptide 2","protein_coding" "AT1G16920","ATRABA1B","Arabidopsis thaliana","RAB GTPase homolog A1B","protein_coding" "AT1G17060","SOB7","Arabidopsis thaliana","cytochrome p450 72c1","protein_coding" "AT1G17290","AlaAT1","Arabidopsis thaliana","alanine aminotransferas","protein_coding" "AT1G17410","No alias","Arabidopsis thaliana","Nucleoside diphosphate kinase family protein","protein_coding" "AT1G17470","ATDRG","Arabidopsis thaliana","developmentally regulated G-protein 1","protein_coding" "AT1G17720","ATB BETA","Arabidopsis thaliana","Protein phosphatase 2A, regulatory subunit PR55","protein_coding" "AT1G17750","PEPR2","Arabidopsis thaliana","PEP1 receptor 2","protein_coding" "AT1G18080","ATARCA","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G18130","No alias","Arabidopsis thaliana","Class II aaRS and biotin synthetases superfamily protein","protein_coding" "AT1G18200","AtRABA6b","Arabidopsis thaliana","RAB GTPase homolog A6B","protein_coding" "AT1G18830","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G19630","CYP722A1","Arabidopsis thaliana","cytochrome P450, family 722, subfamily A, polypeptide 1","protein_coding" "AT1G19750","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G19780","ATCNGC8","Arabidopsis thaliana","cyclic nucleotide gated channel 8","protein_coding" "AT1G20090","ATRAC4","Arabidopsis thaliana","RHO-related protein from plants 2","protein_coding" "AT1G20540","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G20560","AAE1","Arabidopsis thaliana","acyl activating enzyme 1","protein_coding" "AT1G21650","SECA2","Arabidopsis thaliana","Preprotein translocase SecA family protein","protein_coding" "AT1G22300","GRF10","Arabidopsis thaliana","general regulatory factor 10","protein_coding" "AT1G22310","ATMBD8","Arabidopsis thaliana","methyl-CPG-binding domain 8","protein_coding" "AT1G22740","ATRABG3B","Arabidopsis thaliana","RAB GTPase homolog G3B","protein_coding" "AT1G23490","ATARF1","Arabidopsis thaliana","ADP-ribosylation factor 1","protein_coding" "AT1G24130","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G24290","No alias","Arabidopsis thaliana","AAA-type ATPase family protein","protein_coding" "AT1G24530","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G24540","CYP86C1","Arabidopsis thaliana","cytochrome P450, family 86, subfamily C, polypeptide 1","protein_coding" "AT1G25320","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G26190","No alias","Arabidopsis thaliana","Phosphoribulokinase / Uridine kinase family","protein_coding" "AT1G27190","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G27470","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT1G27840","ATCSA-1","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G27880","No alias","Arabidopsis thaliana","DEAD/DEAH box RNA helicase family protein","protein_coding" "AT1G28350","No alias","Arabidopsis thaliana","Nucleotidylyl transferase superfamily protein","protein_coding" "AT1G28430","CYP705A24","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 24","protein_coding" "AT1G28440","HSL1","Arabidopsis thaliana","HAESA-like 1","protein_coding" "AT1G28550","RABA1i","Arabidopsis thaliana","RAB GTPase homolog A1I","protein_coding" "AT1G29320","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G29750","RKF1","Arabidopsis thaliana","receptor-like kinase in flowers 1","protein_coding" "AT1G29870","No alias","Arabidopsis thaliana","tRNA synthetase class II (G, H, P and S) family protein","protein_coding" "AT1G29900","CARB","Arabidopsis thaliana","carbamoyl phosphate synthetase B","protein_coding" "AT1G30520","AAE14","Arabidopsis thaliana","acyl-activating enzyme 14","protein_coding" "AT1G30960","No alias","Arabidopsis thaliana","GTP-binding family protein","protein_coding" "AT1G31420","FEI1","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G31800","LUT5","Arabidopsis thaliana","cytochrome P450, family 97, subfamily A, polypeptide 3","protein_coding" "AT1G31812","ACBP6","Arabidopsis thaliana","acyl-CoA-binding protein 6","protein_coding" "AT1G32060","PRK","Arabidopsis thaliana","phosphoribulokinase","protein_coding" "AT1G33390","FAS4","Arabidopsis thaliana","RNA helicase family protein","protein_coding" "AT1G33720","CYP76C6","Arabidopsis thaliana","cytochrome P450, family 76, subfamily C, polypeptide 6","protein_coding" "AT1G33730","CYP76C5","Arabidopsis thaliana","cytochrome P450, family 76, subfamily C, polypeptide 5","protein_coding" "AT1G34110","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT1G34540","CYP94D1","Arabidopsis thaliana","cytochrome P450, family 94, subfamily D, polypeptide 1","protein_coding" "AT1G34760","RHS5","Arabidopsis thaliana","general regulatory factor 11","protein_coding" "AT1G35710","No alias","Arabidopsis thaliana","Protein kinase family protein with leucine-rich repeat domain","protein_coding" "AT1G35720","ATOXY5","Arabidopsis thaliana","annexin 1","protein_coding" "AT1G43890","ATRAB18","Arabidopsis thaliana","RAB GTPASE HOMOLOG B18","protein_coding" "AT1G43910","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT1G44900","MCM2","Arabidopsis thaliana","minichromosome maintenance (MCM2/3/5) family protein","protein_coding" "AT1G45332","No alias","Arabidopsis thaliana","Translation elongation factor EFG/EF2 protein","protein_coding" "AT1G47610","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G47620","CYP96A8","Arabidopsis thaliana","cytochrome P450, family 96, subfamily A, polypeptide 8","protein_coding" "AT1G47840","HXK3","Arabidopsis thaliana","hexokinase 3","protein_coding" "AT1G48030","mtLPD1","Arabidopsis thaliana","mitochondrial lipoamide dehydrogenase 1","protein_coding" "AT1G48310","CHA18","Arabidopsis thaliana","chromatin remodeling factor18","protein_coding" "AT1G48480","RKL1","Arabidopsis thaliana","receptor-like kinase 1","protein_coding" "AT1G48605","ATHAL3B","Arabidopsis thaliana","Flavoprotein","protein_coding" "AT1G48630","RACK1B_AT","Arabidopsis thaliana","receptor for activated C kinase 1B","protein_coding" "AT1G48650","No alias","Arabidopsis thaliana","DEA(D/H)-box RNA helicase family protein","protein_coding" "AT1G48900","No alias","Arabidopsis thaliana","Signal recognition particle, SRP54 subunit protein","protein_coding" "AT1G48970","No alias","Arabidopsis thaliana","NagB/RpiA/CoA transferase-like superfamily protein","protein_coding" "AT1G49250","No alias","Arabidopsis thaliana","ATP-dependent DNA ligase","protein_coding" "AT1G49270","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT1G49300","ATRAB7","Arabidopsis thaliana","RAB GTPase homolog G3E","protein_coding" "AT1G49450","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G49540","AtELP2","Arabidopsis thaliana","elongator protein 2","protein_coding" "AT1G49880","Erv1","Arabidopsis thaliana","Erv1/Alr family protein","protein_coding" "AT1G49910","BUB3.2","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G50410","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "AT1G50460","HKL1","Arabidopsis thaliana","hexokinase-like 1","protein_coding" "AT1G50480","THFS","Arabidopsis thaliana","10-formyltetrahydrofolate synthetase","protein_coding" "AT1G50520","CYP705A27","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 27","protein_coding" "AT1G50560","CYP705A25","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 25","protein_coding" "AT1G50610","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G50920","No alias","Arabidopsis thaliana","Nucleolar GTP-binding protein","protein_coding" "AT1G51390","NFU5","Arabidopsis thaliana","NFU domain protein 5","protein_coding" "AT1G51690","B ALPHA","Arabidopsis thaliana","protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform","protein_coding" "AT1G51830","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G51980","No alias","Arabidopsis thaliana","Insulinase (Peptidase family M16) protein","protein_coding" "AT1G52280","AtRABG3d","Arabidopsis thaliana","RAB GTPase homolog G3D","protein_coding" "AT1G52290","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT1G52730","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G52920","GPCR","Arabidopsis thaliana","G protein coupled receptor","protein_coding" "AT1G52980","No alias","Arabidopsis thaliana","GTP-binding family protein","protein_coding" "AT1G53140","DRP5A","Arabidopsis thaliana","Dynamin related protein 5A","protein_coding" "AT1G53420","No alias","Arabidopsis thaliana","Leucine-rich repeat transmembrane protein kinase","protein_coding" "AT1G53520","No alias","Arabidopsis thaliana","Chalcone-flavanone isomerase family protein","protein_coding" "AT1G53730","SRF6","Arabidopsis thaliana","STRUBBELIG-receptor family 6","protein_coding" "AT1G53880","No alias","Arabidopsis thaliana","Eukaryotic translation initiation factor 2B (eIF-2B) family protein","protein_coding" "AT1G53900","No alias","Arabidopsis thaliana","Eukaryotic translation initiation factor 2B (eIF-2B) family protein","protein_coding" "AT1G55810","UKL3","Arabidopsis thaliana","uridine kinase-like 3","protein_coding" "AT1G55940","CYP708A1","Arabidopsis thaliana","cytochrome P450, family 708, subfamily A, polypeptide 1","protein_coding" "AT1G56130","No alias","Arabidopsis thaliana","Leucine-rich repeat transmembrane protein kinase","protein_coding" "AT1G56330","SAR1","Arabidopsis thaliana","secretion-associated RAS 1B","protein_coding" "AT1G57750","MAH1","Arabidopsis thaliana","cytochrome P450, family 96, subfamily A, polypeptide 15","protein_coding" "AT1G57820","VIM1","Arabidopsis thaliana","Zinc finger (C3HC4-type RING finger) family protein","protein_coding" "AT1G58050","No alias","Arabidopsis thaliana","RNA helicase family protein","protein_coding" "AT1G58060","No alias","Arabidopsis thaliana","RNA helicase family protein","protein_coding" "AT1G58260","CYP79C3P","Arabidopsis thaliana","cytochrome p450 79c2","protein_coding" "AT1G60500","DRP4C","Arabidopsis thaliana","Dynamin related protein 4C","protein_coding" "AT1G60530","DRP4A","Arabidopsis thaliana","Dynamin related protein 4A","protein_coding" "AT1G60630","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G61140","EDA16","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "AT1G61210","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G62580","No alias","Arabidopsis thaliana","Flavin-binding monooxygenase family protein","protein_coding" "AT1G62750","ATSCO1/CPEF-G","Arabidopsis thaliana","Translation elongation factor EFG/EF2 protein","protein_coding" "AT1G62950","No alias","Arabidopsis thaliana","leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "AT1G63430","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G63680","MURE","Arabidopsis thaliana","acid-amino acid ligases;ligases;ATP binding;ATP binding;ligases","protein_coding" "AT1G63710","CYP86A7","Arabidopsis thaliana","cytochrome P450, family 86, subfamily A, polypeptide 7","protein_coding" "AT1G63940","MDAR6","Arabidopsis thaliana","monodehydroascorbate reductase 6","protein_coding" "AT1G63990","SPO11-2","Arabidopsis thaliana","sporulation 11-2","protein_coding" "AT1G64210","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G64350","SEH1H","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G64900","CYP89","Arabidopsis thaliana","cytochrome P450, family 89, subfamily A, polypeptide 2","protein_coding" "AT1G64930","CYP89A7","Arabidopsis thaliana","cytochrome P450, family 87, subfamily A, polypeptide 7","protein_coding" "AT1G64940","CYP89A6","Arabidopsis thaliana","cytochrome P450, family 87, subfamily A, polypeptide 6","protein_coding" "AT1G64950","CYP89A5","Arabidopsis thaliana","cytochrome P450, family 89, subfamily A, polypeptide 5","protein_coding" "AT1G64990","GTG1","Arabidopsis thaliana","GPCR-type G protein 1","protein_coding" "AT1G65030","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G65070","No alias","Arabidopsis thaliana","DNA mismatch repair protein MutS, type 2","protein_coding" "AT1G65190","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT1G65340","CYP96A3","Arabidopsis thaliana","cytochrome P450, family 96, subfamily A, polypeptide 3","protein_coding" "AT1G65670","CYP702A1","Arabidopsis thaliana","cytochrome P450, family 702, subfamily A, polypeptide 1","protein_coding" "AT1G66530","No alias","Arabidopsis thaliana","Arginyl-tRNA synthetase, class Ic","protein_coding" "AT1G66540","No alias","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT1G66730","AtLIG6","Arabidopsis thaliana","DNA LIGASE 6","protein_coding" "AT1G66830","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G67110","CYP735A2","Arabidopsis thaliana","cytochrome P450, family 735, subfamily A, polypeptide 2","protein_coding" "AT1G67440","emb1688","Arabidopsis thaliana","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding" "AT1G67510","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G67840","CSK","Arabidopsis thaliana","chloroplast sensor kinase","protein_coding" "AT1G68400","No alias","Arabidopsis thaliana","leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "AT1G69400","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G69500","CYP704B1","Arabidopsis thaliana","cytochrome P450, family 704, subfamily B, polypeptide 1","protein_coding" "AT1G69990","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G70460","RHS10","Arabidopsis thaliana","root hair specific 10","protein_coding" "AT1G70490","ARFA1D","Arabidopsis thaliana","Ras-related small GTP-binding family protein","protein_coding" "AT1G70560","TAA1","Arabidopsis thaliana","tryptophan aminotransferase of Arabidopsis 1","protein_coding" "AT1G71840","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT1G72040","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT1G72180","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT1G72300","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT1G72330","ALAAT2","Arabidopsis thaliana","alanine aminotransferase 2","protein_coding" "AT1G72340","No alias","Arabidopsis thaliana","NagB/RpiA/CoA transferase-like superfamily protein","protein_coding" "AT1G72460","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G72660","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT1G72960","No alias","Arabidopsis thaliana","Root hair defective 3 GTP-binding protein (RHD3)","protein_coding" "AT1G72970","EDA17","Arabidopsis thaliana","Glucose-methanol-choline (GMC) oxidoreductase family protein","protein_coding" "AT1G73080","PEPR1","Arabidopsis thaliana","PEP1 receptor 1","protein_coding" "AT1G73340","No alias","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT1G73640","RABA6a","Arabidopsis thaliana","RAB GTPase homolog A6A","protein_coding" "AT1G73720","SMU1","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT1G73980","No alias","Arabidopsis thaliana","Phosphoribulokinase / Uridine kinase family","protein_coding" "AT1G74110","CYP78A10","Arabidopsis thaliana","cytochrome P450, family 78, subfamily A, polypeptide 10","protein_coding" "AT1G74230","GR-RBP5","Arabidopsis thaliana","glycine-rich RNA-binding protein 5","protein_coding" "AT1G74260","PUR4","Arabidopsis thaliana","purine biosynthesis 4","protein_coding" "AT1G74310","ATHSP101","Arabidopsis thaliana","heat shock protein 101","protein_coding" "AT1G74330","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT1G74360","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G74540","CYP98A8","Arabidopsis thaliana","cytochrome P450, family 98, subfamily A, polypeptide 8","protein_coding" "AT1G74550","CYP98A9","Arabidopsis thaliana","cytochrome P450, family 98, subfamily A, polypeptide 9","protein_coding" "AT1G75130","CYP721A1","Arabidopsis thaliana","cytochrome P450, family 721, subfamily A, polypeptide 1","protein_coding" "AT1G75330","OTC","Arabidopsis thaliana","ornithine carbamoyltransferase","protein_coding" "AT1G75640","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT1G75820","FLO5","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT1G75840","ATROP4","Arabidopsis thaliana","RAC-like GTP binding protein 5","protein_coding" "AT1G76260","DWA2","Arabidopsis thaliana","DWD (DDB1-binding WD40 protein) hypersensitive to ABA 2","protein_coding" "AT1G76990","ACR3","Arabidopsis thaliana","ACT domain repeat 3","protein_coding" "AT1G78490","CYP708A3","Arabidopsis thaliana","cytochrome P450, family 708, subfamily A, polypeptide 3","protein_coding" "AT1G78900","VHA-A","Arabidopsis thaliana","vacuolar ATP synthase subunit A","protein_coding" "AT1G78980","SRF5","Arabidopsis thaliana","STRUBBELIG-receptor family 5","protein_coding" "AT1G79370","CYP79C1","Arabidopsis thaliana","cytochrome P450, family 79, subfamily C, polypeptide 1","protein_coding" "AT1G79440","ALDH5F1","Arabidopsis thaliana","aldehyde dehydrogenase 5F1","protein_coding" "AT1G79620","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT1G79930","HSP91","Arabidopsis thaliana","heat shock protein 91","protein_coding" "AT1G80670","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT1G80710","DRS1","Arabidopsis thaliana","DROUGHT SENSITIVE 1","protein_coding" "AT2G01130","No alias","Arabidopsis thaliana","DEA(D/H)-box RNA helicase family protein","protein_coding" "AT2G01210","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G01330","No alias","Arabidopsis thaliana","nucleotide binding","protein_coding" "AT2G01460","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT2G01470","STL2P","Arabidopsis thaliana","SEC12P-like 2 protein","protein_coding" "AT2G01950","BRL2","Arabidopsis thaliana","BRI1-like 2","protein_coding" "AT2G02090","CHA19","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding" "AT2G02220","ATPSKR1","Arabidopsis thaliana","phytosulfokin receptor 1","protein_coding" "AT2G02580","CYP71B9","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 9","protein_coding" "AT2G02780","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G03730","ACR5","Arabidopsis thaliana","ACT domain repeat 5","protein_coding" "AT2G04030","EMB1956","Arabidopsis thaliana","Chaperone protein htpG family protein","protein_coding" "AT2G04450","ATNUDT6","Arabidopsis thaliana","nudix hydrolase homolog 6","protein_coding" "AT2G05180","CYP705A6","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 6","protein_coding" "AT2G05710","ACO3","Arabidopsis thaliana","aconitase 3","protein_coding" "AT2G05720","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G05830","No alias","Arabidopsis thaliana","NagB/RpiA/CoA transferase-like superfamily protein","protein_coding" "AT2G07040","PRK2A","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G07690","MCM5","Arabidopsis thaliana","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding" "AT2G10450","No alias","Arabidopsis thaliana","14-3-3 family protein","protein_coding" "AT2G12190","No alias","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT2G13370","CHR5","Arabidopsis thaliana","chromatin remodeling 5","protein_coding" "AT2G13560","NAD-ME1","Arabidopsis thaliana","NAD-dependent malic enzyme 1","protein_coding" "AT2G13800","ATSERK5","Arabidopsis thaliana","somatic embryogenesis receptor-like kinase 5","protein_coding" "AT2G14050","MCM9","Arabidopsis thaliana","minichromosome maintenance 9","protein_coding" "AT2G14100","CYP705A13","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 13","protein_coding" "AT2G14120","DRP3B","Arabidopsis thaliana","dynamin related protein","protein_coding" "AT2G14750","APK1","Arabidopsis thaliana","APS kinase","protein_coding" "AT2G15300","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G15310","ATARFB1A","Arabidopsis thaliana","ADP-ribosylation factor B1A","protein_coding" "AT2G16060","HB1","Arabidopsis thaliana","hemoglobin 1","protein_coding" "AT2G16250","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G16390","DMS1","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding" "AT2G16405","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G16440","MCM4","Arabidopsis thaliana","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding" "AT2G17800","ATRAC1","Arabidopsis thaliana","Arabidopsis RAC-like 1","protein_coding" "AT2G18190","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT2G18193","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT2G18390","HAL","Arabidopsis thaliana","ADP-ribosylation factor family protein","protein_coding" "AT2G18470","PERK4","Arabidopsis thaliana","roline-rich extensin-like receptor kinase 4","protein_coding" "AT2G18760","CHR8","Arabidopsis thaliana","chromatin remodeling 8","protein_coding" "AT2G18900","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G19430","AtTHO6","Arabidopsis thaliana","DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1","protein_coding" "AT2G19540","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein","protein_coding" "AT2G19860","ATHXK2","Arabidopsis thaliana","hexokinase 2","protein_coding" "AT2G20330","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G20420","No alias","Arabidopsis thaliana","ATP citrate lyase (ACL) family protein","protein_coding" "AT2G21450","CHR34","Arabidopsis thaliana","chromatin remodeling 34","protein_coding" "AT2G21880","ATRABG2","Arabidopsis thaliana","RAB GTPase homolog 7A","protein_coding" "AT2G21910","CYP96A5","Arabidopsis thaliana","cytochrome P450, family 96, subfamily A, polypeptide 5","protein_coding" "AT2G22040","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G22290","RABH1d","Arabidopsis thaliana","RAB GTPase homolog H1D","protein_coding" "AT2G22330","CYP79B3","Arabidopsis thaliana","cytochrome P450, family 79, subfamily B, polypeptide 3","protein_coding" "AT2G22740","SDG23","Arabidopsis thaliana","SU(VAR)3-9 homolog 6","protein_coding" "AT2G23180","CYP96A1","Arabidopsis thaliana","cytochrome P450, family 96, subfamily A, polypeptide 1","protein_coding" "AT2G23190","CYP81D7","Arabidopsis thaliana","cytochrome P450, family 81, subfamily D, polypeptide 7","protein_coding" "AT2G23220","CYP81D6","Arabidopsis thaliana","cytochrome P450, family 81, subfamily D, polypeptide 6","protein_coding" "AT2G23300","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G24130","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT2G24180","CYP71B6","Arabidopsis thaliana","cytochrome p450 71b6","protein_coding" "AT2G24230","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G24610","ATCNGC14","Arabidopsis thaliana","cyclic nucleotide-gated channel 14","protein_coding" "AT2G25140","CLPB4","Arabidopsis thaliana","casein lytic proteinase B4","protein_coding" "AT2G25160","CYP82F1","Arabidopsis thaliana","cytochrome P450, family 82, subfamily F, polypeptide 1","protein_coding" "AT2G25600","AKT6","Arabidopsis thaliana","Shaker pollen inward K+ channel","protein_coding" "AT2G25790","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT2G25840","OVA4","Arabidopsis thaliana","Nucleotidylyl transferase superfamily protein","protein_coding" "AT2G26060","emb1345","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G26080","AtGLDP2","Arabidopsis thaliana","glycine decarboxylase P-protein 2","protein_coding" "AT2G26170","CYP711A1","Arabidopsis thaliana","cytochrome P450, family 711, subfamily A, polypeptide 1","protein_coding" "AT2G26280","CID7","Arabidopsis thaliana","CTC-interacting domain 7","protein_coding" "AT2G26300","ATGPA1","Arabidopsis thaliana","G protein alpha subunit 1","protein_coding" "AT2G26310","No alias","Arabidopsis thaliana","Chalcone-flavanone isomerase family protein","protein_coding" "AT2G26490","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G26650","ATAKT1","Arabidopsis thaliana","K+ transporter 1","protein_coding" "AT2G26700","PID2","Arabidopsis thaliana","AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein","protein_coding" "AT2G26710","CYP72B1","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT2G26730","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G27000","CYP705A8","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 8","protein_coding" "AT2G27010","CYP705A9","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 9","protein_coding" "AT2G27060","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G27170","TTN7","Arabidopsis thaliana","Structural maintenance of chromosomes (SMC) family protein","protein_coding" "AT2G27200","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT2G27490","ATCOAE","Arabidopsis thaliana","dephospho-CoA kinase family","protein_coding" "AT2G27600","VPS4","Arabidopsis thaliana","AAA-type ATPase family protein","protein_coding" "AT2G27690","CYP94C1","Arabidopsis thaliana","cytochrome P450, family 94, subfamily C, polypeptide 1","protein_coding" "AT2G27860","AXS1","Arabidopsis thaliana","UDP-D-apiose/UDP-D-xylose synthase 1","protein_coding" "AT2G28260","CNGC15","Arabidopsis thaliana","cyclic nucleotide-gated channel 15","protein_coding" "AT2G28850","CYP710A3","Arabidopsis thaliana","cytochrome P450, family 710, subfamily A, polypeptide 3","protein_coding" "AT2G28860","CYP710A4","Arabidopsis thaliana","cytochrome P450, family 710, subfamily A, polypeptide 4","protein_coding" "AT2G28970","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G29090","CYP707A2","Arabidopsis thaliana","cytochrome P450, family 707, subfamily A, polypeptide 2","protein_coding" "AT2G30050","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT2G30750","CYP71A12","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 12","protein_coding" "AT2G30770","CYP71A13","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 13","protein_coding" "AT2G30800","HVT1","Arabidopsis thaliana","helicase in vascular tissue and tapetum","protein_coding" "AT2G30910","ARPC1A","Arabidopsis thaliana","actin-related protein C1A","protein_coding" "AT2G31060","No alias","Arabidopsis thaliana","elongation factor family protein","protein_coding" "AT2G31170","SYCO ARATH","Arabidopsis thaliana","Cysteinyl-tRNA synthetase, class Ia family protein","protein_coding" "AT2G31300","ARPC1B","Arabidopsis thaliana","actin-related protein C1B","protein_coding" "AT2G31680","AtRABA5d","Arabidopsis thaliana","RAB GTPase homolog A5D","protein_coding" "AT2G31880","SOBIR1","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G32440","KAO2","Arabidopsis thaliana","ent-kaurenoic acid hydroxylase 2","protein_coding" "AT2G32800","AP4.3A","Arabidopsis thaliana","protein kinase family protein","protein_coding" "AT2G32850","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT2G33170","No alias","Arabidopsis thaliana","Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "AT2G33210","HSP60-2","Arabidopsis thaliana","heat shock protein 60-2","protein_coding" "AT2G33340","MAC3B","Arabidopsis thaliana","MOS4-associated complex 3B","protein_coding" "AT2G33840","No alias","Arabidopsis thaliana","Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial","protein_coding" "AT2G33870","ArRABA1h","Arabidopsis thaliana","RAB GTPase homolog A1H","protein_coding" "AT2G34260","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT2G34470","PSKF109","Arabidopsis thaliana","urease accessory protein G","protein_coding" "AT2G34490","CYP710A2","Arabidopsis thaliana","cytochrome P450, family 710, subfamily A, polypeptide 2","protein_coding" "AT2G34500","CYP710A1","Arabidopsis thaliana","cytochrome P450, family 710, subfamily A, polypeptide 1","protein_coding" "AT2G34560","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT2G35120","No alias","Arabidopsis thaliana","Single hybrid motif superfamily protein","protein_coding" "AT2G35920","No alias","Arabidopsis thaliana","RNA helicase family protein","protein_coding" "AT2G36570","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G37160","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G37760","No alias","Arabidopsis thaliana","NAD(P)-linked oxidoreductase superfamily protein","protein_coding" "AT2G37770","No alias","Arabidopsis thaliana","NAD(P)-linked oxidoreductase superfamily protein","protein_coding" "AT2G38840","No alias","Arabidopsis thaliana","Guanylate-binding family protein","protein_coding" "AT2G39730","RCA","Arabidopsis thaliana","rubisco activase","protein_coding" "AT2G40360","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G41500","EMB2776","Arabidopsis thaliana","WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related","protein_coding" "AT2G41540","GPDHC1","Arabidopsis thaliana","6-phosphogluconate dehydrogenase family protein","protein_coding" "AT2G41670","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT2G41820","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G42250","CYP712A1","Arabidopsis thaliana","cytochrome P450, family 712, subfamily A, polypeptide 1","protein_coding" "AT2G42290","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G42850","CYP718","Arabidopsis thaliana","cytochrome P450, family 718","protein_coding" "AT2G43130","ATRABA5C","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT2G43770","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G44070","No alias","Arabidopsis thaliana","NagB/RpiA/CoA transferase-like superfamily protein","protein_coding" "AT2G44350","CSY4","Arabidopsis thaliana","Citrate synthase family protein","protein_coding" "AT2G44590","DL1D","Arabidopsis thaliana","DYNAMIN-like 1D","protein_coding" "AT2G44610","RAB6A","Arabidopsis thaliana","Ras-related small GTP-binding family protein","protein_coding" "AT2G44690","ARAC9","Arabidopsis thaliana","Arabidopsis RAC-like 9","protein_coding" "AT2G44890","CYP704A1","Arabidopsis thaliana","cytochrome P450, family 704, subfamily A, polypeptide 1","protein_coding" "AT2G44980","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding" "AT2G45280","RAD51C","Arabidopsis thaliana","RAS associated with diabetes protein 51C","protein_coding" "AT2G45340","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT2G45490","AtAUR3","Arabidopsis thaliana","ataurora3","protein_coding" "AT2G45500","No alias","Arabidopsis thaliana","AAA-type ATPase family protein","protein_coding" "AT2G45510","CYP704A2","Arabidopsis thaliana","cytochrome P450, family 704, subfamily A, polypeptide 2","protein_coding" "AT2G45540","No alias","Arabidopsis thaliana","WD-40 repeat family protein / beige-related","protein_coding" "AT2G45550","CYP76C4","Arabidopsis thaliana","cytochrome P450, family 76, subfamily C, polypeptide 4","protein_coding" "AT2G45570","CYP76C2","Arabidopsis thaliana","cytochrome P450, family 76, subfamily C, polypeptide 2","protein_coding" "AT2G45580","CYP76C3","Arabidopsis thaliana","cytochrome P450, family 76, subfamily C, polypeptide 3","protein_coding" "AT2G45590","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT2G45770","FRD4","Arabidopsis thaliana","signal recognition particle receptor protein, chloroplast (FTSY)","protein_coding" "AT2G45970","LCR","Arabidopsis thaliana","cytochrome P450, family 86, subfamily A, polypeptide 8","protein_coding" "AT2G46020","CHA2","Arabidopsis thaliana","transcription regulatory protein SNF2, putative","protein_coding" "AT2G46280","TRIP-1","Arabidopsis thaliana","TGF-beta receptor interacting protein 1","protein_coding" "AT2G46290","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G46370","JAR1","Arabidopsis thaliana","Auxin-responsive GH3 family protein","protein_coding" "AT2G46430","ATCNGC3","Arabidopsis thaliana","cyclic nucleotide gated channel 3","protein_coding" "AT2G46440","CNGC11","Arabidopsis thaliana","cyclic nucleotide-gated channels","protein_coding" "AT2G46450","ATCNGC12","Arabidopsis thaliana","cyclic nucleotide-gated channel 12","protein_coding" "AT2G46560","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT2G46620","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT2G46660","CYP78A6","Arabidopsis thaliana","cytochrome P450, family 78, subfamily A, polypeptide 6","protein_coding" "AT2G46950","CYP709B2","Arabidopsis thaliana","cytochrome P450, family 709, subfamily B, polypeptide 2","protein_coding" "AT2G46960","CYP709B1","Arabidopsis thaliana","cytochrome P450, family 709, subfamily B, polypeptide 1","protein_coding" "AT2G47170","ARF1A1C","Arabidopsis thaliana","Ras-related small GTP-binding family protein","protein_coding" "AT2G47410","No alias","Arabidopsis thaliana","WD40/YVTN repeat-like-containing domain;Bromodomain","protein_coding" "AT2G47790","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT2G47990","EDA13","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT3G01340","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G01460","ATMBD9","Arabidopsis thaliana","methyl-CPG-binding domain 9","protein_coding" "AT3G01640","ATGLCAK","Arabidopsis thaliana","glucuronokinase G","protein_coding" "AT3G01900","CYP94B2","Arabidopsis thaliana","cytochrome P450, family 94, subfamily B, polypeptide 2","protein_coding" "AT3G01990","ACR6","Arabidopsis thaliana","ACT domain repeat 6","protein_coding" "AT3G02065","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G02130","CLI1","Arabidopsis thaliana","receptor-like protein kinase 2","protein_coding" "AT3G02660","emb2768","Arabidopsis thaliana","Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial","protein_coding" "AT3G02850","SKOR","Arabidopsis thaliana","STELAR K+ outward rectifier","protein_coding" "AT3G02880","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G03120","ATARFB1C","Arabidopsis thaliana","ADP-ribosylation factor B1C","protein_coding" "AT3G03470","CYP89A9","Arabidopsis thaliana","cytochrome P450, family 87, subfamily A, polypeptide 9","protein_coding" "AT3G03770","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G03900","APK3","Arabidopsis thaliana","adenosine-5'-phosphosulfate (APS) kinase 3","protein_coding" "AT3G04600","No alias","Arabidopsis thaliana","Nucleotidylyl transferase superfamily protein","protein_coding" "AT3G05090","LRS1","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G05120","ATGID1A","Arabidopsis thaliana","alpha/beta-Hydrolases superfamily protein","protein_coding" "AT3G05420","ACBP4","Arabidopsis thaliana","acyl-CoA binding protein 4","protein_coding" "AT3G05780","LON3","Arabidopsis thaliana","lon protease 3","protein_coding" "AT3G05790","LON4","Arabidopsis thaliana","lon protease 4","protein_coding" "AT3G06010","ATCHR12","Arabidopsis thaliana","Homeotic gene regulator","protein_coding" "AT3G06480","No alias","Arabidopsis thaliana","DEAD box RNA helicase family protein","protein_coding" "AT3G06483","PDK","Arabidopsis thaliana","pyruvate dehydrogenase kinase","protein_coding" "AT3G06580","GALK","Arabidopsis thaliana","Mevalonate/galactokinase family protein","protein_coding" "AT3G06880","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G07040","RPM1","Arabidopsis thaliana","NB-ARC domain-containing disease resistance protein","protein_coding" "AT3G07050","No alias","Arabidopsis thaliana","GTP-binding family protein","protein_coding" "AT3G07300","No alias","Arabidopsis thaliana","NagB/RpiA/CoA transferase-like superfamily protein","protein_coding" "AT3G07410","AtRABA5b","Arabidopsis thaliana","RAB GTPase homolog A5B","protein_coding" "AT3G07770","Hsp89.1","Arabidopsis thaliana","HEAT SHOCK PROTEIN 89.1","protein_coding" "AT3G08680","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G08850","RAPTOR1","Arabidopsis thaliana","HEAT repeat ;WD domain, G-beta repeat protein protein","protein_coding" "AT3G09080","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G09660","MCM8","Arabidopsis thaliana","minichromosome maintenance 8","protein_coding" "AT3G09900","ATRABE1E","Arabidopsis thaliana","RAB GTPase homolog E1E","protein_coding" "AT3G09910","ATRAB18C","Arabidopsis thaliana","RAB GTPase homolog C2B","protein_coding" "AT3G10270","GYRB1","Arabidopsis thaliana","DNA GYRASE B1","protein_coding" "AT3G10350","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G10530","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G10560","UNE9","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT3G10570","CYP77A6","Arabidopsis thaliana","cytochrome P450, family 77, subfamily A, polypeptide 6","protein_coding" "AT3G10690","GYRA","Arabidopsis thaliana","DNA GYRASE A","protein_coding" "AT3G10700","GalAK","Arabidopsis thaliana","galacturonic acid kinase","protein_coding" "AT3G11710","ATKRS-1","Arabidopsis thaliana","lysyl-tRNA synthetase 1","protein_coding" "AT3G11730","ATFP8","Arabidopsis thaliana","Ras-related small GTP-binding family protein","protein_coding" "AT3G12080","emb2738","Arabidopsis thaliana","GTP-binding family protein","protein_coding" "AT3G12160","RABA4D","Arabidopsis thaliana","RAB GTPase homolog A4D","protein_coding" "AT3G12580","ATHSP70","Arabidopsis thaliana","heat shock protein 70","protein_coding" "AT3G12610","DRT100","Arabidopsis thaliana","Leucine-rich repeat (LRR) family protein","protein_coding" "AT3G12810","SRCAP","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein","protein_coding" "AT3G13065","SRF4","Arabidopsis thaliana","STRUBBELIG-receptor family 4","protein_coding" "AT3G13170","ATSPO11-1","Arabidopsis thaliana","Spo11/DNA topoisomerase VI, subunit A protein","protein_coding" "AT3G13290","VCR","Arabidopsis thaliana","varicose-related","protein_coding" "AT3G13300","VCS","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G13490","OVA5","Arabidopsis thaliana","Lysyl-tRNA synthetase, class II","protein_coding" "AT3G13730","CYP90D1","Arabidopsis thaliana","cytochrome P450, family 90, subfamily D, polypeptide 1","protein_coding" "AT3G13870","RHD3","Arabidopsis thaliana","Root hair defective 3 GTP-binding protein (RHD3)","protein_coding" "AT3G14350","SRF7","Arabidopsis thaliana","STRUBBELIG-receptor family 7","protein_coding" "AT3G14610","CYP72A7","Arabidopsis thaliana","cytochrome P450, family 72, subfamily A, polypeptide 7","protein_coding" "AT3G14620","CYP72A8","Arabidopsis thaliana","cytochrome P450, family 72, subfamily A, polypeptide 8","protein_coding" "AT3G14630","CYP72A9","Arabidopsis thaliana","cytochrome P450, family 72, subfamily A, polypeptide 9","protein_coding" "AT3G14640","CYP72A10","Arabidopsis thaliana","cytochrome P450, family 72, subfamily A, polypeptide 10","protein_coding" "AT3G14650","CYP72A11","Arabidopsis thaliana","cytochrome P450, family 72, subfamily A, polypeptide 11","protein_coding" "AT3G14660","CYP72A13","Arabidopsis thaliana","cytochrome P450, family 72, subfamily A, polypeptide 13","protein_coding" "AT3G14680","CYP72A14","Arabidopsis thaliana","cytochrome P450, family 72, subfamily A, polypeptide 14","protein_coding" "AT3G14690","CYP72A15","Arabidopsis thaliana","cytochrome P450, family 72, subfamily A, polypeptide 15","protein_coding" "AT3G14840","No alias","Arabidopsis thaliana","Leucine-rich repeat transmembrane protein kinase","protein_coding" "AT3G15060","AtRABA1g","Arabidopsis thaliana","RAB GTPase homolog A1G","protein_coding" "AT3G15610","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G15790","MBD11","Arabidopsis thaliana","methyl-CPG-binding domain 11","protein_coding" "AT3G16100","ATRABG3C","Arabidopsis thaliana","RAB GTPase homolog G3C","protein_coding" "AT3G16170","No alias","Arabidopsis thaliana","AMP-dependent synthetase and ligase family protein","protein_coding" "AT3G16600","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "AT3G16650","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G16910","ACN1","Arabidopsis thaliana","acyl-activating enzyme 7","protein_coding" "AT3G17240","mtLPD2","Arabidopsis thaliana","lipoamide dehydrogenase 2","protein_coding" "AT3G17690","CNGC19","Arabidopsis thaliana","cyclic nucleotide gated channel 19","protein_coding" "AT3G17700","ATCNGC20","Arabidopsis thaliana","cyclic nucleotide-binding transporter 1","protein_coding" "AT3G17840","RLK902","Arabidopsis thaliana","receptor-like kinase 902","protein_coding" "AT3G18030","HAL3A","Arabidopsis thaliana","HAL3-like protein A","protein_coding" "AT3G18060","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT3G18130","RACK1C_AT","Arabidopsis thaliana","receptor for activated C kinase 1C","protein_coding" "AT3G18140","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G18524","ATMSH2","Arabidopsis thaliana","MUTS homolog 2","protein_coding" "AT3G18810","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT3G18820","ATRAB7B","Arabidopsis thaliana","RAB GTPase homolog G3F","protein_coding" "AT3G18860","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT3G18950","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G19210","ATRAD54","Arabidopsis thaliana","homolog of RAD54","protein_coding" "AT3G19270","CYP707A4","Arabidopsis thaliana","cytochrome P450, family 707, subfamily A, polypeptide 4","protein_coding" "AT3G19590","BUB3.1","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G19700","IKU2","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G20010","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "AT3G20040","HKL2","Arabidopsis thaliana","Hexokinase","protein_coding" "AT3G20080","CYP705A15","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 15","protein_coding" "AT3G20090","CYP705A18","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 18","protein_coding" "AT3G20100","CYP705A19","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 19","protein_coding" "AT3G20110","CYP705A20","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 20","protein_coding" "AT3G20120","CYP705A21","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 21","protein_coding" "AT3G20130","CYP705A22","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 22","protein_coding" "AT3G20140","CYP705A23","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 23","protein_coding" "AT3G20190","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G20330","PYRB","Arabidopsis thaliana","PYRIMIDINE B","protein_coding" "AT3G20475","MSH5","Arabidopsis thaliana","MUTS-homologue 5","protein_coding" "AT3G20740","FIE1","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G20940","CYP705A30","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 30","protein_coding" "AT3G20950","CYP705A32","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 32","protein_coding" "AT3G20960","CYP705A33","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 33","protein_coding" "AT3G21060","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G21540","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT3G22880","ARLIM15","Arabidopsis thaliana","DNA repair (Rad51) family protein","protein_coding" "AT3G22950","ARFC1","Arabidopsis thaliana","ADP-ribosylation factor C1","protein_coding" "AT3G23890","TOPII","Arabidopsis thaliana","topoisomerase II","protein_coding" "AT3G23990","HSP60","Arabidopsis thaliana","heat shock protein 60","protein_coding" "AT3G24240","No alias","Arabidopsis thaliana","Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "AT3G24320","CHM","Arabidopsis thaliana","MUTL protein homolog 1","protein_coding" "AT3G24340","chr40","Arabidopsis thaliana","chromatin remodeling 40","protein_coding" "AT3G24495","MSH7","Arabidopsis thaliana","MUTS homolog 7","protein_coding" "AT3G24550","PERK1","Arabidopsis thaliana","proline extensin-like receptor kinase 1","protein_coding" "AT3G24660","TMKL1","Arabidopsis thaliana","transmembrane kinase-like 1","protein_coding" "AT3G25180","CYP82G1","Arabidopsis thaliana","cytochrome P450, family 82, subfamily G, polypeptide 1","protein_coding" "AT3G25840","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT3G26125","CYP86C2","Arabidopsis thaliana","cytochrome P450, family 86, subfamily C, polypeptide 2","protein_coding" "AT3G26150","CYP71B16","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 16","protein_coding" "AT3G26160","CYP71B17","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 17","protein_coding" "AT3G26170","CYP71B19","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 19","protein_coding" "AT3G26180","CYP71B20","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 20","protein_coding" "AT3G26190","CYP71B21","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 21","protein_coding" "AT3G26200","CYP71B22","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 22","protein_coding" "AT3G26210","CYP71B23","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 23","protein_coding" "AT3G26220","CYP71B3","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 3","protein_coding" "AT3G26230","CYP71B24","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 24","protein_coding" "AT3G26270","CYP71B25","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 25","protein_coding" "AT3G26280","CYP71B4","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 4","protein_coding" "AT3G26290","CYP71B26","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 26","protein_coding" "AT3G26300","CYP71B34","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 34","protein_coding" "AT3G26310","CYP71B35","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 35","protein_coding" "AT3G26320","CYP71B36","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 36","protein_coding" "AT3G26330","CYP71B37","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 37","protein_coding" "AT3G26420","ATRZ-1A","Arabidopsis thaliana","RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain","protein_coding" "AT3G26480","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein","protein_coding" "AT3G26560","No alias","Arabidopsis thaliana","ATP-dependent RNA helicase, putative","protein_coding" "AT3G26640","LWD2","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G26830","CYP71B15","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT3G27190","UKL2","Arabidopsis thaliana","uridine kinase-like 2","protein_coding" "AT3G27440","UKL5","Arabidopsis thaliana","uridine kinase-like 5","protein_coding" "AT3G27640","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G27730","RCK","Arabidopsis thaliana","ATP binding;ATP-dependent helicases;DNA helicases","protein_coding" "AT3G28040","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT3G28450","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G28520","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G28540","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G28570","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G28580","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G28600","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G28610","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G28740","CYP81D1","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT3G29800","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G30180","CYP85A2","Arabidopsis thaliana","brassinosteroid-6-oxidase 2","protein_coding" "AT3G30290","CYP702A8","Arabidopsis thaliana","cytochrome P450, family 702, subfamily A, polypeptide 8","protein_coding" "AT3G33530","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein","protein_coding" "AT3G42660","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT3G42670","CLSY","Arabidopsis thaliana","chromatin remodeling 38","protein_coding" "AT3G42850","No alias","Arabidopsis thaliana","Mevalonate/galactokinase family protein","protein_coding" "AT3G42880","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G44250","CYP71B38","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 38","protein_coding" "AT3G44530","HIRA","Arabidopsis thaliana","homolog of histone chaperone HIRA","protein_coding" "AT3G44740","No alias","Arabidopsis thaliana","Class II aaRS and biotin synthetases superfamily protein","protein_coding" "AT3G44970","No alias","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT3G45300","ATIVD","Arabidopsis thaliana","isovaleryl-CoA-dehydrogenase","protein_coding" "AT3G45450","No alias","Arabidopsis thaliana","Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G45620","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G45770","No alias","Arabidopsis thaliana","Polyketide synthase, enoylreductase family protein","protein_coding" "AT3G45780","RPT1","Arabidopsis thaliana","phototropin 1","protein_coding" "AT3G46060","ATRABE1C","Arabidopsis thaliana","RAB GTPase homolog 8A","protein_coding" "AT3G46370","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G46580","MBD05","Arabidopsis thaliana","methyl-CPG-binding domain protein 5","protein_coding" "AT3G46830","RAB-A2C","Arabidopsis thaliana","RAB GTPase homolog A2C","protein_coding" "AT3G47090","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G47110","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G47450","ATNOA1","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G47570","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G47580","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G48000","ALDH2","Arabidopsis thaliana","aldehyde dehydrogenase 2B4","protein_coding" "AT3G48010","ATCNGC16","Arabidopsis thaliana","cyclic nucleotide-gated channel 16","protein_coding" "AT3G48040","ATRAC8","Arabidopsis thaliana","RHO-related protein from plants 10","protein_coding" "AT3G48270","CYP71A26","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 26","protein_coding" "AT3G48280","CYP71A25","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 25","protein_coding" "AT3G48290","CYP71A24","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 24","protein_coding" "AT3G48300","CYP71A23","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 23","protein_coding" "AT3G48310","CYP71A22","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 22","protein_coding" "AT3G48320","CYP71A21","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 21","protein_coding" "AT3G48520","CYP94B3","Arabidopsis thaliana","cytochrome P450, family 94, subfamily B, polypeptide 3","protein_coding" "AT3G48870","HSP93-III","Arabidopsis thaliana","Clp ATPase","protein_coding" "AT3G48990","No alias","Arabidopsis thaliana","AMP-dependent synthetase and ligase family protein","protein_coding" "AT3G49180","RID3","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G49240","emb1796","Arabidopsis thaliana","Pentatricopeptide repeat (PPR) superfamily protein","protein_coding" "AT3G49400","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G49660","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G49670","BAM2","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT3G49860","ATARLA1B","Arabidopsis thaliana","ADP-ribosylation factor-like A1B","protein_coding" "AT3G49870","ARLA1C","Arabidopsis thaliana","ADP-ribosylation factor-like A1C","protein_coding" "AT3G50230","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G50390","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G50590","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G50930","BCS1","Arabidopsis thaliana","cytochrome BC1 synthesis","protein_coding" "AT3G50940","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G51300","ATRAC11","Arabidopsis thaliana","RHO-related protein from plants 1","protein_coding" "AT3G51740","IMK2","Arabidopsis thaliana","inflorescence meristem receptor-like kinase 2","protein_coding" "AT3G51930","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G52190","PHF1","Arabidopsis thaliana","phosphate transporter traffic facilitator1","protein_coding" "AT3G52200","LTA3","Arabidopsis thaliana","Dihydrolipoamide acetyltransferase, long form protein","protein_coding" "AT3G52570","No alias","Arabidopsis thaliana","alpha/beta-Hydrolases superfamily protein","protein_coding" "AT3G52970","CYP76G1","Arabidopsis thaliana","cytochrome P450, family 76, subfamily G, polypeptide 1","protein_coding" "AT3G53130","CYP97C1","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT3G53230","No alias","Arabidopsis thaliana","ATPase, AAA-type, CDC48 protein","protein_coding" "AT3G53280","CYP71B5","Arabidopsis thaliana","cytochrome p450 71b5","protein_coding" "AT3G53290","CYP71B30P","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 30 pseudogene","protein_coding" "AT3G53300","CYP71B31","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 31","protein_coding" "AT3G53305","CYP71B32","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 32","protein_coding" "AT3G53390","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT3G53590","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G53610","ATRAB8","Arabidopsis thaliana","RAB GTPase homolog 8","protein_coding" "AT3G54280","BTAF1","Arabidopsis thaliana","DNA binding;ATP binding;nucleic acid binding;binding;helicases;ATP binding;DNA binding;helicases","protein_coding" "AT3G54660","GR","Arabidopsis thaliana","glutathione reductase","protein_coding" "AT3G54670","TTN8","Arabidopsis thaliana","Structural maintenance of chromosomes (SMC) family protein","protein_coding" "AT3G54840","ATRABF1","Arabidopsis thaliana","Ras-related small GTP-binding family protein","protein_coding" "AT3G55010","ATPURM","Arabidopsis thaliana","phosphoribosylformylglycinamidine cyclo-ligase, chloroplast / phosphoribosyl-aminoimidazole synthetase / AIR synthase (PUR5)","protein_coding" "AT3G55400","OVA1","Arabidopsis thaliana","methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS)","protein_coding" "AT3G56100","IMK3","Arabidopsis thaliana","meristematic receptor-like kinase","protein_coding" "AT3G56300","No alias","Arabidopsis thaliana","Cysteinyl-tRNA synthetase, class Ia family protein","protein_coding" "AT3G56370","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G56630","CYP94D2","Arabidopsis thaliana","cytochrome P450, family 94, subfamily D, polypeptide 2","protein_coding" "AT3G57180","BPG2","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT3G57300","ATINO80","Arabidopsis thaliana","INO80 ortholog","protein_coding" "AT3G57560","NAGK","Arabidopsis thaliana","N-acetyl-l-glutamate kinase","protein_coding" "AT3G57640","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT3G57760","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT3G57830","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT3G58140","No alias","Arabidopsis thaliana","phenylalanyl-tRNA synthetase class IIc family protein","protein_coding" "AT3G59410","GCN2","Arabidopsis thaliana","protein kinase family protein","protein_coding" "AT3G59760","ATCS-C","Arabidopsis thaliana","O-acetylserine (thiol) lyase isoform C","protein_coding" "AT3G60190","EDR3","Arabidopsis thaliana","DYNAMIN-like 1E","protein_coding" "AT3G61040","CYP76C7","Arabidopsis thaliana","cytochrome P450, family 76, subfamily C, polypeptide 7","protein_coding" "AT3G61760","ADL1B","Arabidopsis thaliana","DYNAMIN-like 1B","protein_coding" "AT3G61880","CYP78A9","Arabidopsis thaliana","cytochrome p450 78a9","protein_coding" "AT3G62120","No alias","Arabidopsis thaliana","Class II aaRS and biotin synthetases superfamily protein","protein_coding" "AT3G62290","ARFA1E","Arabidopsis thaliana","ADP-ribosylation factor A1E","protein_coding" "AT3G62980","TIR1","Arabidopsis thaliana","F-box/RNI-like superfamily protein","protein_coding" "AT3G63030","MBD4","Arabidopsis thaliana","methyl-CPG-binding domain 4","protein_coding" "AT3G63170","No alias","Arabidopsis thaliana","Chalcone-flavanone isomerase family protein","protein_coding" "AT3G63310","BIL4","Arabidopsis thaliana","Bax inhibitor-1 family protein","protein_coding" "AT3G63420","ATAGG1","Arabidopsis thaliana","Ggamma-subunit 1","protein_coding" "AT4G00090","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G00360","ATT1","Arabidopsis thaliana","cytochrome P450, family 86, subfamily A, polypeptide 2","protein_coding" "AT4G00416","MBD3","Arabidopsis thaliana","methyl-CPG-binding domain 3","protein_coding" "AT4G00570","NAD-ME2","Arabidopsis thaliana","NAD-dependent malic enzyme 2","protein_coding" "AT4G00960","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT4G01010","ATCNGC13","Arabidopsis thaliana","cyclic nucleotide-gated channel 13","protein_coding" "AT4G01020","No alias","Arabidopsis thaliana","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding" "AT4G01800","SECA1","Arabidopsis thaliana","Albino or Glassy Yellow 1","protein_coding" "AT4G01860","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein","protein_coding" "AT4G01900","GLB1","Arabidopsis thaliana","GLNB1 homolog","protein_coding" "AT4G02060","MCM7","Arabidopsis thaliana","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding" "AT4G02080","SAR2","Arabidopsis thaliana","secretion-associated RAS super family 2","protein_coding" "AT4G02460","PMS1","Arabidopsis thaliana","DNA mismatch repair protein, putative","protein_coding" "AT4G02482","No alias","Arabidopsis thaliana","chloroplast outer envelope GTP-binding protein, putative","protein_coding" "AT4G02690","No alias","Arabidopsis thaliana","Bax inhibitor-1 family protein","protein_coding" "AT4G02730","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G02790","No alias","Arabidopsis thaliana","GTP-binding family protein","protein_coding" "AT4G02930","No alias","Arabidopsis thaliana","GTP binding Elongation factor Tu family protein","protein_coding" "AT4G03020","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT4G03390","SRF3","Arabidopsis thaliana","STRUBBELIG-receptor family 3","protein_coding" "AT4G04350","EMB2369","Arabidopsis thaliana","tRNA synthetase class I (I, L, M and V) family protein","protein_coding" "AT4G04940","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT4G05410","YAO","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G07410","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein","protein_coding" "AT4G07524","No alias","Arabidopsis thaliana","Ras-related small GTP-binding family protein","protein_coding" "AT4G08190","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT4G08920","HY4","Arabidopsis thaliana","cryptochrome 1","protein_coding" "AT4G09320","NDPK1","Arabidopsis thaliana","Nucleoside diphosphate kinase family protein","protein_coding" "AT4G09720","ATRABG3A","Arabidopsis thaliana","RAB GTPase homolog G3A","protein_coding" "AT4G10320","No alias","Arabidopsis thaliana","tRNA synthetase class I (I, L, M and V) family protein","protein_coding" "AT4G10620","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT4G10650","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT4G11010","NDPK3","Arabidopsis thaliana","nucleoside diphosphate kinase 3","protein_coding" "AT4G11270","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G12060","No alias","Arabidopsis thaliana","Double Clp-N motif protein","protein_coding" "AT4G12300","CYP706A4","Arabidopsis thaliana","cytochrome P450, family 706, subfamily A, polypeptide 4","protein_coding" "AT4G12310","CYP706A5","Arabidopsis thaliana","cytochrome P450, family 706, subfamily A, polypeptide 5","protein_coding" "AT4G12320","CYP706A6","Arabidopsis thaliana","cytochrome P450, family 706, subfamily A, polypeptide 6","protein_coding" "AT4G12330","CYP706A7","Arabidopsis thaliana","cytochrome P450, family 706, subfamily A, polypeptide 7","protein_coding" "AT4G12720","NUDT7","Arabidopsis thaliana","MutT/nudix family protein","protein_coding" "AT4G12790","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT4G13290","CYP71A19","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 19","protein_coding" "AT4G13310","CYP71A20","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 20","protein_coding" "AT4G13350","NIG","Arabidopsis thaliana","NSP (nuclear shuttle protein)-interacting GTPase","protein_coding" "AT4G13770","CYP83A1","Arabidopsis thaliana","cytochrome P450, family 83, subfamily A, polypeptide 1","protein_coding" "AT4G13850","GRP2","Arabidopsis thaliana","glycine-rich RNA-binding protein 2","protein_coding" "AT4G14350","No alias","Arabidopsis thaliana","AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein","protein_coding" "AT4G14730","No alias","Arabidopsis thaliana","Bax inhibitor-1 family protein","protein_coding" "AT4G15110","CYP97B3","Arabidopsis thaliana","cytochrome P450, family 97, subfamily B, polypeptide 3","protein_coding" "AT4G15300","CYP702A2","Arabidopsis thaliana","cytochrome P450, family 702, subfamily A, polypeptide 2","protein_coding" "AT4G15330","CYP705A1","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 1","protein_coding" "AT4G15350","CYP705A2","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 2","protein_coding" "AT4G15360","CYP705A3","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 3","protein_coding" "AT4G15380","CYP705A4","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 4","protein_coding" "AT4G15900","PRL1","Arabidopsis thaliana","pleiotropic regulatory locus 1","protein_coding" "AT4G16130","ATISA1","Arabidopsis thaliana","arabinose kinase","protein_coding" "AT4G16566","HINT4","Arabidopsis thaliana","histidine triad nucleotide-binding 4","protein_coding" "AT4G16890","SNC1","Arabidopsis thaliana","disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "AT4G16950","RPP5","Arabidopsis thaliana","Disease resistance protein (TIR-NBS-LRR class) family","protein_coding" "AT4G17160","RABB1a","Arabidopsis thaliana","RAB GTPase homolog B1A","protein_coding" "AT4G17170","RAB2A","Arabidopsis thaliana","RAB GTPase homolog B1C","protein_coding" "AT4G17380","ATMSH4","Arabidopsis thaliana","MUTS-like protein 4","protein_coding" "AT4G17530","RAB1C","Arabidopsis thaliana","RAB GTPase homolog 1C","protein_coding" "AT4G17870","PYR1","Arabidopsis thaliana","Polyketide cyclase/dehydrase and lipid transport superfamily protein","protein_coding" "AT4G18290","KAT2","Arabidopsis thaliana","potassium channel in Arabidopsis thaliana 2","protein_coding" "AT4G18430","AtRABA1e","Arabidopsis thaliana","RAB GTPase homolog A1E","protein_coding" "AT4G18640","MRH1","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT4G18800","ATHSGBP","Arabidopsis thaliana","RAB GTPase homolog A1D","protein_coding" "AT4G18900","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G18905","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G19230","CYP707A1","Arabidopsis thaliana","cytochrome P450, family 707, subfamily A, polypeptide 1","protein_coding" "AT4G19640","RABF2B","Arabidopsis thaliana","Ras-related small GTP-binding family protein","protein_coding" "AT4G19660","NPR4","Arabidopsis thaliana","NPR1-like protein 4","protein_coding" "AT4G20140","GSO1","Arabidopsis thaliana","Leucine-rich repeat transmembrane protein kinase","protein_coding" "AT4G20240","CYP71A27","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 27","protein_coding" "AT4G20270","BAM3","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT4G21130","EMB2271","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G21520","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G21530","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G21800","QQT2","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT4G22200","AKT3","Arabidopsis thaliana","potassium transport 2/3","protein_coding" "AT4G22690","CYP706A1","Arabidopsis thaliana","cytochrome P450, family 706, subfamily A, polypeptide 1","protein_coding" "AT4G22710","CYP706A2","Arabidopsis thaliana","cytochrome P450, family 706, subfamily A, polypeptide 2","protein_coding" "AT4G22730","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT4G22745","MBD1","Arabidopsis thaliana","methyl-CPG-binding domain 1","protein_coding" "AT4G22780","ACR7","Arabidopsis thaliana","ACT domain repeat 7","protein_coding" "AT4G23240","CRK16","Arabidopsis thaliana","cysteine-rich RLK (RECEPTOR-like protein kinase) 16","protein_coding" "AT4G23270","CRK19","Arabidopsis thaliana","cysteine-rich RLK (RECEPTOR-like protein kinase) 19","protein_coding" "AT4G23740","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT4G23900","No alias","Arabidopsis thaliana","Nucleoside diphosphate kinase family protein","protein_coding" "AT4G24190","AtHsp90.7","Arabidopsis thaliana","Chaperone protein htpG family protein","protein_coding" "AT4G24230","ACBP3","Arabidopsis thaliana","acyl-CoA-binding domain 3","protein_coding" "AT4G24280","cpHsc70-1","Arabidopsis thaliana","chloroplast heat shock protein 70-1","protein_coding" "AT4G24830","No alias","Arabidopsis thaliana","arginosuccinate synthase family","protein_coding" "AT4G25120","SRS2","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT4G25370","No alias","Arabidopsis thaliana","Double Clp-N motif protein","protein_coding" "AT4G25434","ATNUDT10","Arabidopsis thaliana","nudix hydrolase homolog 10","protein_coding" "AT4G26300","emb1027","Arabidopsis thaliana","Arginyl-tRNA synthetase, class Ic","protein_coding" "AT4G26510","UKL4","Arabidopsis thaliana","uridine kinase-like 4","protein_coding" "AT4G26860","No alias","Arabidopsis thaliana","Predicted pyridoxal phosphate-dependent enzyme, YBL036C type","protein_coding" "AT4G27630","GTG2","Arabidopsis thaliana","GPCR-type G protein 2","protein_coding" "AT4G27710","CYP709B3","Arabidopsis thaliana","cytochrome P450, family 709, subfamily B, polypeptide 3","protein_coding" "AT4G27780","ACBP2","Arabidopsis thaliana","acyl-CoA binding protein 2","protein_coding" "AT4G28450","No alias","Arabidopsis thaliana","nucleotide binding;protein binding","protein_coding" "AT4G28490","HAE","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT4G28650","No alias","Arabidopsis thaliana","Leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "AT4G28950","ARAC7","Arabidopsis thaliana","RHO-related protein from plants 9","protein_coding" "AT4G29130","ATHXK1","Arabidopsis thaliana","hexokinase 1","protein_coding" "AT4G29380","No alias","Arabidopsis thaliana","protein kinase family protein / WD-40 repeat family protein","protein_coding" "AT4G29830","VIP3","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G29860","TAN","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G29990","No alias","Arabidopsis thaliana","Leucine-rich repeat transmembrane protein kinase protein","protein_coding" "AT4G30250","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT4G30360","ATCNGC17","Arabidopsis thaliana","cyclic nucleotide-gated channel 17","protein_coding" "AT4G30560","ATCNGC9","Arabidopsis thaliana","cyclic nucleotide gated channel 9","protein_coding" "AT4G30600","No alias","Arabidopsis thaliana","signal recognition particle receptor alpha subunit family protein","protein_coding" "AT4G31160","DCAF1","Arabidopsis thaliana","DDB1-CUL4 associated factor 1","protein_coding" "AT4G31180","No alias","Arabidopsis thaliana","Class II aminoacyl-tRNA and biotin synthetases superfamily protein","protein_coding" "AT4G31250","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT4G31500","CYP83B1","Arabidopsis thaliana","cytochrome P450, family 83, subfamily B, polypeptide 1","protein_coding" "AT4G31940","CYP82C4","Arabidopsis thaliana","cytochrome P450, family 82, subfamily C, polypeptide 4","protein_coding" "AT4G31950","CYP82C3","Arabidopsis thaliana","cytochrome P450, family 82, subfamily C, polypeptide 3","protein_coding" "AT4G31970","CYP82C2","Arabidopsis thaliana","cytochrome P450, family 82, subfamily C, polypeptide 2","protein_coding" "AT4G32170","CYP96A2","Arabidopsis thaliana","cytochrome P450, family 96, subfamily A, polypeptide 2","protein_coding" "AT4G32500","KT5","Arabidopsis thaliana","K+ transporter 5","protein_coding" "AT4G32650","AtLKT1","Arabidopsis thaliana","potassium channel in Arabidopsis thaliana 3","protein_coding" "AT4G32990","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G33650","DRP3A","Arabidopsis thaliana","dynamin-related protein 3A","protein_coding" "AT4G33760","No alias","Arabidopsis thaliana","tRNA synthetase class II (D, K and N) family protein","protein_coding" "AT4G34200","EDA9","Arabidopsis thaliana","D-3-phosphoglycerate dehydrogenase","protein_coding" "AT4G34220","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT4G34280","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT4G34380","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G34460","AGB1","Arabidopsis thaliana","GTP binding protein beta 1","protein_coding" "AT4G35020","ARAC3","Arabidopsis thaliana","RAC-like 3","protein_coding" "AT4G35030","No alias","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT4G35140","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G35370","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G35520","ATMLH3","Arabidopsis thaliana","MUTL protein homolog 3","protein_coding" "AT4G35740","RecQl3","Arabidopsis thaliana","DEAD/DEAH box RNA helicase family protein","protein_coding" "AT4G35860","ATRABB1B","Arabidopsis thaliana","GTP-binding 2","protein_coding" "AT4G35950","RAC2","Arabidopsis thaliana","RAC-like 6","protein_coding" "AT4G36180","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT4G36270","No alias","Arabidopsis thaliana","ATP binding","protein_coding" "AT4G36280","No alias","Arabidopsis thaliana","Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein","protein_coding" "AT4G36290","CRT1","Arabidopsis thaliana","compromised recognition of TCV 1","protein_coding" "AT4G36380","ROT3","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT4G36760","ATAPP1","Arabidopsis thaliana","aminopeptidase P1","protein_coding" "AT4G37250","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT4G37310","CYP81H1","Arabidopsis thaliana","cytochrome P450, family 81, subfamily H, polypeptide 1","protein_coding" "AT4G37320","CYP81D5","Arabidopsis thaliana","cytochrome P450, family 81, subfamily D, polypeptide 5","protein_coding" "AT4G37330","CYP81D4","Arabidopsis thaliana","cytochrome P450, family 81, subfamily D, polypeptide 4","protein_coding" "AT4G37340","CYP81D3","Arabidopsis thaliana","cytochrome P450, family 81, subfamily D, polypeptide 3","protein_coding" "AT4G37360","CYP81D2","Arabidopsis thaliana","cytochrome P450, family 81, subfamily D, polypeptide 2","protein_coding" "AT4G37370","CYP81D8","Arabidopsis thaliana","cytochrome P450, family 81, subfamily D, polypeptide 8","protein_coding" "AT4G37400","CYP81F3","Arabidopsis thaliana","cytochrome P450, family 81, subfamily F, polypeptide 3","protein_coding" "AT4G37410","CYP81F4","Arabidopsis thaliana","cytochrome P450, family 81, subfamily F, polypeptide 4","protein_coding" "AT4G37430","CYP91A2","Arabidopsis thaliana","cytochrome P450, family 91, subfamily A, polypeptide 2","protein_coding" "AT4G37840","HKL3","Arabidopsis thaliana","hexokinase-like 3","protein_coding" "AT4G37870","PEPCK","Arabidopsis thaliana","phosphoenolpyruvate carboxykinase 1","protein_coding" "AT4G37910","mtHsc70-1","Arabidopsis thaliana","mitochondrial heat shock protein 70-1","protein_coding" "AT4G38480","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT4G39270","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT4G39280","No alias","Arabidopsis thaliana","phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative","protein_coding" "AT4G39480","CYP96A9","Arabidopsis thaliana","cytochrome P450, family 96, subfamily A, polypeptide 9","protein_coding" "AT4G39500","CYP96A11","Arabidopsis thaliana","cytochrome P450, family 96, subfamily A, polypeptide 11","protein_coding" "AT4G39510","CYP96A12","Arabidopsis thaliana","cytochrome P450, family 96, subfamily A, polypeptide 12","protein_coding" "AT4G39520","No alias","Arabidopsis thaliana","GTP-binding protein-related","protein_coding" "AT4G39890","AtRABH1c","Arabidopsis thaliana","RAB GTPase homolog H1C","protein_coding" "AT4G39940","AKN2","Arabidopsis thaliana","APS-kinase 2","protein_coding" "AT4G39950","CYP79B2","Arabidopsis thaliana","cytochrome P450, family 79, subfamily B, polypeptide 2","protein_coding" "AT4G39990","ATRABA4B","Arabidopsis thaliana","RAB GTPase homolog A4B","protein_coding" "AT5G01770","RAPTOR1A","Arabidopsis thaliana","HEAT repeat ;WD domain, G-beta repeat protein protein","protein_coding" "AT5G01890","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT5G01950","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G02820","BIN5","Arabidopsis thaliana","Spo11/DNA topoisomerase VI, subunit A protein","protein_coding" "AT5G02900","CYP96A13","Arabidopsis thaliana","cytochrome P450, family 96, subfamily A, polypeptide 13","protein_coding" "AT5G03290","IDH-V","Arabidopsis thaliana","isocitrate dehydrogenase V","protein_coding" "AT5G03520","ATRABE1D","Arabidopsis thaliana","RAB GTPase homolog 8C","protein_coding" "AT5G03530","ATRAB ALPHA","Arabidopsis thaliana","RAB GTPase homolog C2A","protein_coding" "AT5G03940","54CP","Arabidopsis thaliana","chloroplast signal recognition particle 54 kDa subunit","protein_coding" "AT5G04110","GYRB3","Arabidopsis thaliana","DNA GYRASE B3","protein_coding" "AT5G04130","GYRB2","Arabidopsis thaliana","DNA GYRASE B2","protein_coding" "AT5G04290","SPT5L","Arabidopsis thaliana","kow domain-containing transcription factor 1","protein_coding" "AT5G04330","No alias","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT5G04630","CYP77A9","Arabidopsis thaliana","cytochrome P450, family 77, subfamily A, polypeptide 9","protein_coding" "AT5G04660","CYP77A4","Arabidopsis thaliana","cytochrome P450, family 77, subfamily A, polypeptide 4","protein_coding" "AT5G04895","No alias","Arabidopsis thaliana","DEA(D/H)-box RNA helicase family protein","protein_coding" "AT5G05000","OEP34","Arabidopsis thaliana","translocon at the outer envelope membrane of chloroplasts 34","protein_coding" "AT5G05130","No alias","Arabidopsis thaliana","DNA/RNA helicase protein","protein_coding" "AT5G05160","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G05260","CYP79A2","Arabidopsis thaliana","cytochrome p450 79a2","protein_coding" "AT5G05440","RCAR8","Arabidopsis thaliana","Polyketide cyclase/dehydrase and lipid transport superfamily protein","protein_coding" "AT5G05570","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT5G05690","CYP90A","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT5G05970","NEDD1","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G06580","No alias","Arabidopsis thaliana","FAD-linked oxidases family protein","protein_coding" "AT5G06820","SRF2","Arabidopsis thaliana","STRUBBELIG-receptor family 2","protein_coding" "AT5G06900","CYP93D1","Arabidopsis thaliana","cytochrome P450, family 93, subfamily D, polypeptide 1","protein_coding" "AT5G06905","CYP712A2","Arabidopsis thaliana","cytochrome P450, family 712, subfamily A, polypeptide 2","protein_coding" "AT5G07440","GDH2","Arabidopsis thaliana","glutamate dehydrogenase 2","protein_coding" "AT5G07660","SMC6A","Arabidopsis thaliana","structural maintenance of chromosomes 6A","protein_coding" "AT5G07810","No alias","Arabidopsis thaliana","SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein","protein_coding" "AT5G07990","CYP75B1","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT5G08250","No alias","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT5G08560","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT5G08650","No alias","Arabidopsis thaliana","Small GTP-binding protein","protein_coding" "AT5G08670","No alias","Arabidopsis thaliana","ATP synthase alpha/beta family protein","protein_coding" "AT5G09590","HSC70-5","Arabidopsis thaliana","mitochondrial HSO70 2","protein_coding" "AT5G09970","CYP78A7","Arabidopsis thaliana","cytochrome P450, family 78, subfamily A, polypeptide 7","protein_coding" "AT5G10020","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT5G10260","AtRABH1e","Arabidopsis thaliana","RAB GTPase homolog H1E","protein_coding" "AT5G10370","No alias","Arabidopsis thaliana","helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related","protein_coding" "AT5G10600","CYP81K2","Arabidopsis thaliana","cytochrome P450, family 81, subfamily K, polypeptide 2","protein_coding" "AT5G10610","CYP81K1","Arabidopsis thaliana","cytochrome P450, family 81, subfamily K, polypeptide 1","protein_coding" "AT5G10880","No alias","Arabidopsis thaliana","tRNA synthetase-related / tRNA ligase-related","protein_coding" "AT5G10940","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT5G11240","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT5G13650","No alias","Arabidopsis thaliana","elongation factor family protein","protein_coding" "AT5G13700","APAO","Arabidopsis thaliana","polyamine oxidase 1","protein_coding" "AT5G13960","SDG33","Arabidopsis thaliana","SU(VAR)3-9 homolog 4","protein_coding" "AT5G14050","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G14210","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G14400","CYP724A1","Arabidopsis thaliana","cytochrome P450, family 724, subfamily A, polypeptide 1","protein_coding" "AT5G14470","No alias","Arabidopsis thaliana","GHMP kinase family protein","protein_coding" "AT5G14530","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G14610","No alias","Arabidopsis thaliana","DEAD box RNA helicase family protein","protein_coding" "AT5G14670","ATARFA1B","Arabidopsis thaliana","ADP-ribosylation factor A1B","protein_coding" "AT5G14870","CNGC18","Arabidopsis thaliana","cyclic nucleotide-gated channel 18","protein_coding" "AT5G15410","DND1","Arabidopsis thaliana","Cyclic nucleotide-regulated ion channel family protein","protein_coding" "AT5G15450","CLPB3","Arabidopsis thaliana","casein lytic proteinase B3","protein_coding" "AT5G15530","CAC1-B","Arabidopsis thaliana","biotin carboxyl carrier protein 2","protein_coding" "AT5G15550","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G15920","SMC5","Arabidopsis thaliana","structural maintenance of chromosomes 5","protein_coding" "AT5G16050","GF14 UPSILON","Arabidopsis thaliana","general regulatory factor 5","protein_coding" "AT5G16390","BCCP1","Arabidopsis thaliana","chloroplastic acetylcoenzyme A carboxylase 1","protein_coding" "AT5G16590","LRR1","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G16715","EMB2247","Arabidopsis thaliana","ATP binding;valine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases","protein_coding" "AT5G16750","TOZ","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein","protein_coding" "AT5G17060","ATARFB1B","Arabidopsis thaliana","ADP-ribosylation factor B1B","protein_coding" "AT5G17730","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT5G17740","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT5G17750","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT5G17760","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT5G18170","GDH1","Arabidopsis thaliana","glutamate dehydrogenase 1","protein_coding" "AT5G19310","No alias","Arabidopsis thaliana","Homeotic gene regulator","protein_coding" "AT5G19720","No alias","Arabidopsis thaliana","Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain","protein_coding" "AT5G19920","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G20010","RAN1","Arabidopsis thaliana","RAS-related nuclear protein-1","protein_coding" "AT5G20020","RAN2","Arabidopsis thaliana","RAS-related GTP-binding nuclear protein 2","protein_coding" "AT5G20040","IPT9","Arabidopsis thaliana","isopentenyltransferase 9","protein_coding" "AT5G20420","CHR42","Arabidopsis thaliana","chromatin remodeling 42","protein_coding" "AT5G20480","EFR","Arabidopsis thaliana","EF-TU receptor","protein_coding" "AT5G20690","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G21326","No alias","Arabidopsis thaliana","Ca2+regulated serine-threonine protein kinase family protein","protein_coding" "AT5G22010","RFC1","Arabidopsis thaliana","replication factor C1","protein_coding" "AT5G22370","EMB1705","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT5G22750","RAD5","Arabidopsis thaliana","DNA/RNA helicase protein","protein_coding" "AT5G23190","CYP86B1","Arabidopsis thaliana","cytochrome P450, family 86, subfamily B, polypeptide 1","protein_coding" "AT5G23430","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G23730","RUP2","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G24100","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G24520","ATTTG1","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G24850","CRY3","Arabidopsis thaliana","cryptochrome 3","protein_coding" "AT5G24900","CYP714A2","Arabidopsis thaliana","cytochrome P450, family 714, subfamily A, polypeptide 2","protein_coding" "AT5G24910","CYP714A1","Arabidopsis thaliana","cytochrome P450, family 714, subfamily A, polypeptide 1","protein_coding" "AT5G24950","CYP71A15","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 15","protein_coding" "AT5G24960","CYP71A14","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 14","protein_coding" "AT5G25120","CYP71B11","Arabidopsis thaliana","ytochrome p450, family 71, subfamily B, polypeptide 11","protein_coding" "AT5G25130","CYP71B12","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 12","protein_coding" "AT5G25140","CYP71B13","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 13","protein_coding" "AT5G25150","TAF5","Arabidopsis thaliana","TBP-associated factor 5","protein_coding" "AT5G25180","CYP71B14","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 14","protein_coding" "AT5G25900","GA3","Arabidopsis thaliana","GA requiring 3","protein_coding" "AT5G26742","emb1138","Arabidopsis thaliana","DEAD box RNA helicase (RH3)","protein_coding" "AT5G26860","LON_ARA_ARA","Arabidopsis thaliana","lon protease 1","protein_coding" "AT5G27630","ACBP5","Arabidopsis thaliana","acyl-CoA binding protein 5","protein_coding" "AT5G27945","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G28840","GME","Arabidopsis thaliana","GDP-D-mannose 3',5'-epimerase","protein_coding" "AT5G35390","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G35715","CYP71B8","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 8","protein_coding" "AT5G35930","No alias","Arabidopsis thaliana","AMP-dependent synthetase and ligase family protein","protein_coding" "AT5G36110","CYP716A1","Arabidopsis thaliana","cytochrome P450, family 716, subfamily A, polypeptide 1","protein_coding" "AT5G36130","No alias","Arabidopsis thaliana","Cytochrome P450 superfamily protein","protein_coding" "AT5G36220","CYP81D1","Arabidopsis thaliana","cytochrome p450 81d1","protein_coding" "AT5G37450","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G37500","GORK","Arabidopsis thaliana","gated outwardly-rectifying K+ channel","protein_coding" "AT5G37680","ARLA1A","Arabidopsis thaliana","ADP-ribosylation factor-like A1A","protein_coding" "AT5G38450","CYP735A1","Arabidopsis thaliana","cytochrome P450, family 735, subfamily A, polypeptide 1","protein_coding" "AT5G38480","RCI1","Arabidopsis thaliana","general regulatory factor 3","protein_coding" "AT5G38640","No alias","Arabidopsis thaliana","NagB/RpiA/CoA transferase-like superfamily protein","protein_coding" "AT5G38830","No alias","Arabidopsis thaliana","Cysteinyl-tRNA synthetase, class Ia family protein","protein_coding" "AT5G38970","BR6OX","Arabidopsis thaliana","brassinosteroid-6-oxidase 1","protein_coding" "AT5G39550","VIM3","Arabidopsis thaliana","Zinc finger (C3HC4-type RING finger) family protein","protein_coding" "AT5G39620","AtRABG1","Arabidopsis thaliana","RAB GTPase homolog G1","protein_coding" "AT5G39900","No alias","Arabidopsis thaliana","Small GTP-binding protein","protein_coding" "AT5G39960","No alias","Arabidopsis thaliana","GTP binding;GTP binding","protein_coding" "AT5G40000","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT5G40010","AATP1","Arabidopsis thaliana","AAA-ATPase 1","protein_coding" "AT5G40870","UK/UPRT1","Arabidopsis thaliana","uridine kinase/uracil phosphoribosyltransferase 1","protein_coding" "AT5G41180","No alias","Arabidopsis thaliana","leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "AT5G42080","AG68","Arabidopsis thaliana","dynamin-like protein","protein_coding" "AT5G42580","CYP705A12","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 12","protein_coding" "AT5G42590","CYP71A16","Arabidopsis thaliana","cytochrome P450, family 71, subfamily A, polypeptide 16","protein_coding" "AT5G42650","CYP74A","Arabidopsis thaliana","allene oxide synthase","protein_coding" "AT5G43020","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G43470","HRT","Arabidopsis thaliana","Disease resistance protein (CC-NBS-LRR class) family","protein_coding" "AT5G43530","No alias","Arabidopsis thaliana","Helicase protein with RING/U-box domain","protein_coding" "AT5G43920","No alias","Arabidopsis thaliana","transducin family protein / WD-40 repeat family protein","protein_coding" "AT5G43930","No alias","Arabidopsis thaliana","Transducin family protein / WD-40 repeat family protein","protein_coding" "AT5G44620","CYP706A3","Arabidopsis thaliana","cytochrome P450, family 706, subfamily A, polypeptide 3","protein_coding" "AT5G44635","MCM6","Arabidopsis thaliana","minichromosome maintenance (MCM2/3/5) family protein","protein_coding" "AT5G44700","GSO2","Arabidopsis thaliana","Leucine-rich repeat transmembrane protein kinase","protein_coding" "AT5G44800","PKR1","Arabidopsis thaliana","chromatin remodeling 4","protein_coding" "AT5G45110","ATNPR3","Arabidopsis thaliana","NPR1-like protein 3","protein_coding" "AT5G45130","RAB5A","Arabidopsis thaliana","RAB homolog 1","protein_coding" "AT5G45160","No alias","Arabidopsis thaliana","Root hair defective 3 GTP-binding protein (RHD3)","protein_coding" "AT5G45340","CYP707A3","Arabidopsis thaliana","cytochrome P450, family 707, subfamily A, polypeptide 3","protein_coding" "AT5G45750","RABA1c","Arabidopsis thaliana","RAB GTPase homolog A1C","protein_coding" "AT5G45760","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G45780","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G45800","MEE62","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G45840","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G45970","ARAC2","Arabidopsis thaliana","RAC-like 2","protein_coding" "AT5G46025","No alias","Arabidopsis thaliana","Ras-related small GTP-binding family protein","protein_coding" "AT5G46070","No alias","Arabidopsis thaliana","Guanylate-binding family protein","protein_coding" "AT5G46240","KAT1","Arabidopsis thaliana","potassium channel in Arabidopsis thaliana 1","protein_coding" "AT5G46280","MCM3","Arabidopsis thaliana","Minichromosome maintenance (MCM2/3/5) family protein","protein_coding" "AT5G46330","FLS2","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT5G46790","PYL1","Arabidopsis thaliana","PYR1-like 1","protein_coding" "AT5G47040","LON2","Arabidopsis thaliana","lon protease 2","protein_coding" "AT5G47200","ATRAB1A","Arabidopsis thaliana","RAB GTPase homolog 1A","protein_coding" "AT5G47520","AtRABA5a","Arabidopsis thaliana","RAB GTPase homolog A5A","protein_coding" "AT5G47650","ATNUDX2","Arabidopsis thaliana","nudix hydrolase homolog 2","protein_coding" "AT5G47960","ATRABA4C","Arabidopsis thaliana","RAB GTPase homolog A4C","protein_coding" "AT5G47990","CYP705A5","Arabidopsis thaliana","cytochrome P450, family 705, subfamily A, polypeptide 5","protein_coding" "AT5G48000","THAH1","Arabidopsis thaliana","cytochrome P450, family 708, subfamily A, polypeptide 2","protein_coding" "AT5G48485","DIR1","Arabidopsis thaliana","Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein","protein_coding" "AT5G48600","ATCAP-C","Arabidopsis thaliana","structural maintenance of chromosome 3","protein_coding" "AT5G48940","No alias","Arabidopsis thaliana","Leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "AT5G49030","OVA2","Arabidopsis thaliana","tRNA synthetase class I (I, L, M and V) family protein","protein_coding" "AT5G49430","No alias","Arabidopsis thaliana","WD40/YVTN repeat-like-containing domain;Bromodomain","protein_coding" "AT5G49500","No alias","Arabidopsis thaliana","Signal recognition particle, SRP54 subunit protein","protein_coding" "AT5G49770","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G49780","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G50120","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G50230","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G50550","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G50650","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G50780","No alias","Arabidopsis thaliana","Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein","protein_coding" "AT5G50920","HSP93-V","Arabidopsis thaliana","CLPC homologue 1","protein_coding" "AT5G50960","ATNBP35","Arabidopsis thaliana","nucleotide binding protein 35","protein_coding" "AT5G51070","SAG15","Arabidopsis thaliana","Clp ATPase","protein_coding" "AT5G51350","No alias","Arabidopsis thaliana","Leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "AT5G51560","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G51900","No alias","Arabidopsis thaliana","Cytochrome P450 family protein","protein_coding" "AT5G52210","ATGB1","Arabidopsis thaliana","GTP-binding protein 1","protein_coding" "AT5G52230","MBD13","Arabidopsis thaliana","methyl-CPG-binding domain protein 13","protein_coding" "AT5G52250","RUP1","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G52320","CYP96A4","Arabidopsis thaliana","cytochrome P450, family 96, subfamily A, polypeptide 4","protein_coding" "AT5G52400","CYP715A1","Arabidopsis thaliana","cytochrome P450, family 715, subfamily A, polypeptide 1","protein_coding" "AT5G52520","OVA6","Arabidopsis thaliana","Class II aaRS and biotin synthetases superfamily protein","protein_coding" "AT5G52820","No alias","Arabidopsis thaliana","WD-40 repeat family protein / notchless protein, putative","protein_coding" "AT5G53130","ATCNGC1","Arabidopsis thaliana","cyclic nucleotide gated channel 1","protein_coding" "AT5G53320","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G53470","ACBP1","Arabidopsis thaliana","acyl-CoA binding protein 1","protein_coding" "AT5G53580","No alias","Arabidopsis thaliana","NAD(P)-linked oxidoreductase superfamily protein","protein_coding" "AT5G53890","PSKR2","Arabidopsis thaliana","phytosylfokine-alpha receptor 2","protein_coding" "AT5G54090","No alias","Arabidopsis thaliana","DNA mismatch repair protein MutS, type 2","protein_coding" "AT5G54250","DND2","Arabidopsis thaliana","cyclic nucleotide-gated cation channel 4","protein_coding" "AT5G54500","FQR1","Arabidopsis thaliana","flavodoxin-like quinone reductase 1","protein_coding" "AT5G54590","CRLK1","Arabidopsis thaliana","Protein kinase superfamily protein","protein_coding" "AT5G54840","SGP1","Arabidopsis thaliana","Ras-related small GTP-binding family protein","protein_coding" "AT5G55080","RAN4","Arabidopsis thaliana","ras-related nuclear protein 4","protein_coding" "AT5G55190","RAN3","Arabidopsis thaliana","RAN GTPase 3","protein_coding" "AT5G55200","No alias","Arabidopsis thaliana","Co-chaperone GrpE family protein","protein_coding" "AT5G56000","Hsp81.4","Arabidopsis thaliana","HEAT SHOCK PROTEIN 81.4","protein_coding" "AT5G56010","HSP81-3","Arabidopsis thaliana","heat shock protein 81-3","protein_coding" "AT5G56030","HSP81-2","Arabidopsis thaliana","heat shock protein 81-2","protein_coding" "AT5G56040","No alias","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT5G56130","THO3","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G57220","CYP81F2","Arabidopsis thaliana","cytochrome P450, family 81, subfamily F, polypeptide 2","protein_coding" "AT5G57260","CYP71B10","Arabidopsis thaliana","cytochrome P450, family 71, subfamily B, polypeptide 10","protein_coding" "AT5G57450","XRCC3","Arabidopsis thaliana","homolog of X-ray repair cross complementing 3 (XRCC3)","protein_coding" "AT5G57940","CNGC5","Arabidopsis thaliana","cyclic nucleotide gated channel 5","protein_coding" "AT5G57960","No alias","Arabidopsis thaliana","GTP-binding protein, HflX","protein_coding" "AT5G58140","NPL1","Arabidopsis thaliana","phototropin 2","protein_coding" "AT5G58150","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G58300","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G58720","No alias","Arabidopsis thaliana","smr (Small MutS Related) domain-containing protein","protein_coding" "AT5G58760","DDB2","Arabidopsis thaliana","damaged DNA binding 2","protein_coding" "AT5G58860","CYP86A1","Arabidopsis thaliana","cytochrome P450, family 86, subfamily A, polypeptide 1","protein_coding" "AT5G59150","ATRAB-A2D","Arabidopsis thaliana","RAB GTPase homolog A2D","protein_coding" "AT5G59380","ATMBD6","Arabidopsis thaliana","methyl-CPG-binding domain 6","protein_coding" "AT5G59660","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G59800","ATMBD7","Arabidopsis thaliana","methyl-CPG-binding domain 7","protein_coding" "AT5G59840","No alias","Arabidopsis thaliana","Ras-related small GTP-binding family protein","protein_coding" "AT5G60730","No alias","Arabidopsis thaliana","Anion-transporting ATPase","protein_coding" "AT5G60860","AtRABA1f","Arabidopsis thaliana","RAB GTPase homolog A1F","protein_coding" "AT5G60940","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G61030","GR-RBP3","Arabidopsis thaliana","glycine-rich RNA-binding protein 3","protein_coding" "AT5G61320","CYP89A3","Arabidopsis thaliana","cytochrome P450, family 89, subfamily A, polypeptide 3","protein_coding" "AT5G61460","ATRAD18","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT5G61480","PXY","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G62880","ATRAC10","Arabidopsis thaliana","RAC-like 10","protein_coding" "AT5G63010","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G63310","NDPK2","Arabidopsis thaliana","nucleoside diphosphate kinase 2","protein_coding" "AT5G63410","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G63450","CYP94B1","Arabidopsis thaliana","cytochrome P450, family 94, subfamily B, polypeptide 1","protein_coding" "AT5G63710","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G63930","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G63950","CHR24","Arabidopsis thaliana","chromatin remodeling 24","protein_coding" "AT5G64580","No alias","Arabidopsis thaliana","AAA-type ATPase family protein","protein_coding" "AT5G64630","NFB01","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G64730","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G64990","AtRABH1a","Arabidopsis thaliana","RAB GTPase homolog H1A","protein_coding" "AT5G65270","AtRABA4a","Arabidopsis thaliana","RAB GTPase homolog A4A","protein_coding" "AT5G65690","PEPCK","Arabidopsis thaliana","phosphoenolpyruvate carboxykinase 2","protein_coding" "AT5G65700","BAM1","Arabidopsis thaliana","Leucine-rich receptor-like protein kinase family protein","protein_coding" "AT5G65710","HSL2","Arabidopsis thaliana","HAESA-like 2","protein_coding" "AT5G65720","ATNFS1","Arabidopsis thaliana","nitrogen fixation S (NIFS)-like 1","protein_coding" "AT5G65890","ACR1","Arabidopsis thaliana","ACT domain repeat 1","protein_coding" "AT5G66240","No alias","Arabidopsis thaliana","Transducin/WD40 repeat-like superfamily protein","protein_coding" "AT5G66760","SDH1-1","Arabidopsis thaliana","succinate dehydrogenase 1-1","protein_coding" "AT5G66970","No alias","Arabidopsis thaliana","P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "AT5G67200","No alias","Arabidopsis thaliana","Leucine-rich repeat protein kinase family protein","protein_coding" "AT5G67280","RLK","Arabidopsis thaliana","receptor-like kinase","protein_coding" "AT5G67310","CYP81G1","Arabidopsis thaliana","cytochrome P450, family 81, subfamily G, polypeptide 1","protein_coding" "AT5G67520","APK4","Arabidopsis thaliana","adenosine-5'-phosphosulfate (APS) kinase 4","protein_coding" "AT5G67560","ARLA1D","Arabidopsis thaliana","ADP-ribosylation factor-like A1D","protein_coding" "Cpa|evm.model.tig00000025.1","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000025.27","No alias","Cyanophora paradoxa ","11.8.1.2 lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. long chain base2 (LCB2)","protein_coding" "Cpa|evm.model.tig00000025.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000025.53","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000025.6","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cpa|evm.model.tig00000037.2","No alias","Cyanophora paradoxa ","13.1.7.7 amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal. histidinol phosphate aminotransferase 1 (HPA1)","protein_coding" "Cpa|evm.model.tig00000037.28","No alias","Cyanophora paradoxa ","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "Cpa|evm.model.tig00000037.32","No alias","Cyanophora paradoxa ","29.2.2 protein.synthesis.ribosome biogenesis Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. Arabidopsis thaliana protein kinase 19 (ATPK19)","protein_coding" "Cpa|evm.model.tig00000042.100","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000042.101","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000042.108","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000042.177","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000042.208","No alias","Cyanophora paradoxa ","26.17 misc.dynamin Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. dynamin-related protein 3A (DRP3A)","protein_coding" "Cpa|evm.model.tig00000042.209","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000042.231","No alias","Cyanophora paradoxa ","23.3.2.3 nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase Thymidine kinase","protein_coding" "Cpa|evm.model.tig00000042.268","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000042.30","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure replication factor C 2 (RFC2)","protein_coding" "Cpa|evm.model.tig00000042.5","No alias","Cyanophora paradoxa ","17.3.1.2.99 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other squalene epoxidase 3 (SQE3)","protein_coding" "Cpa|evm.model.tig00000042.57","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000042.88","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000042.99","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000053.14","No alias","Cyanophora paradoxa ","30.3 signalling.calcium unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus recombinant protein is fully active and induced by Ca2+ calmodulin-like domain protein kinase 9 (CDPK9)","protein_coding" "Cpa|evm.model.tig00000053.5","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cpa|evm.model.tig00000056.15","No alias","Cyanophora paradoxa ","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cpa|evm.model.tig00000056.23","No alias","Cyanophora paradoxa ","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cpa|evm.model.tig00000056.26","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI member of Myosin-like proteins myosin-like protein XIG (XIG)","protein_coding" "Cpa|evm.model.tig00000057.107","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. pleiotropic drug resistance 9 (PDR9)","protein_coding" "Cpa|evm.model.tig00000057.108","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 1 (PDR1)","protein_coding" "Cpa|evm.model.tig00000057.124","No alias","Cyanophora paradoxa ","23.1.2.31 nucleotide metabolism.synthesis.purine.GMP synthetase GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative","protein_coding" "Cpa|evm.model.tig00000057.40","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling. VH1-interacting kinase (VIK)","protein_coding" "Cpa|evm.model.tig00000057.55","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cpa|evm.model.tig00000057.60","No alias","Cyanophora paradoxa ","26.17 misc.dynamin Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. dynamin-related protein 3A (DRP3A)","protein_coding" "Cpa|evm.model.tig00000057.66","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ATP-binding cassette A2 (ABCA2)","protein_coding" "Cpa|evm.model.tig00000057.67","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ABC2 homolog 6 (ATH6)","protein_coding" "Cpa|evm.model.tig00000057.72","No alias","Cyanophora paradoxa ","30.3 signalling.calcium Encodes a Ca(2+)-dependent, calmodulin-independent protein kinase that is rapidly induced by drought and high-salt stress but not by low-temperature stress or heat stress. Positive regulator of ABA signaling. Phosphorylates ABA responsive transcription factors ABF1 and ABF4. calcium-dependent protein kinase 2 (CDPK2)","protein_coding" "Cpa|evm.model.tig00000057.93","No alias","Cyanophora paradoxa ","28.2 DNA.repair Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination. POSTMEIOTIC SEGREGATION 1 (PMS1)","protein_coding" "Cpa|evm.model.tig00000058.10","No alias","Cyanophora paradoxa ","13.1.7.9 amino acid metabolism.synthesis.histidine.histidinol dehydrogenase Encodes histidinol dehydrogenase. Up-regulated in response to UV-B. histidinol dehydrogenase (HDH)","protein_coding" "Cpa|evm.model.tig00000073.14","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "Cpa|evm.model.tig00000073.2","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a serine/threonine protein kinase. serine/threonine protein kinase 3 (PK3)","protein_coding" "Cpa|evm.model.tig00000073.24","No alias","Cyanophora paradoxa ","29.3.4.99 protein.targeting.secretory pathway.unspecified signal recognition particle receptor alpha subunit family protein","protein_coding" "Cpa|evm.model.tig00000073.33","No alias","Cyanophora paradoxa ","29.4.1 protein.postranslational modification.kinase encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase SNF1 kinase homolog 10 (KIN10)","protein_coding" "Cpa|evm.model.tig00000073.37","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000073.38","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000076.133","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000076.72","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000076.78","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000093.111","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000093.123","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "Cpa|evm.model.tig00000093.151","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase embryo defective 1138 (emb1138)","protein_coding" "Cpa|evm.model.tig00000093.212","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000093.243","No alias","Cyanophora paradoxa ","33.99 development.unspecified Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably","protein_coding" "Cpa|evm.model.tig00000093.35","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000093.37","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain. CBL-interacting protein kinase 20 (CIPK20)","protein_coding" "Cpa|evm.model.tig00000093.56","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000093.6","No alias","Cyanophora paradoxa ","31.2 cell.division CDK-activating kinase 4 (CAK4)","protein_coding" "Cpa|evm.model.tig00000093.82","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification AGC kinase 1.7 (AGC1.7)","protein_coding" "Cpa|evm.model.tig00000113.111","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000113.14","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000113.17","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes an novel myosin isoform. myosin-like protein XIF (XIF)","protein_coding" "Cpa|evm.model.tig00000113.24","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000113.38","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000113.58","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000114.22","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000114.35","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000114.47","No alias","Cyanophora paradoxa ","33.99 development.unspecified embryo defective 2001 (EMB2001)","protein_coding" "Cpa|evm.model.tig00000128.11","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling factor17 (CHR17)","protein_coding" "Cpa|evm.model.tig00000128.19","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000128.21","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000133.22","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 7 (MRP7)","protein_coding" "Cpa|evm.model.tig00000133.23","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cpa|evm.model.tig00000133.42","No alias","Cyanophora paradoxa ","13.2.4.4 amino acid metabolism.degradation.branched chain group.leucine MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion. MCCA","protein_coding" "Cpa|evm.model.tig00000133.46","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 13 (PGP13)","protein_coding" "Cpa|evm.model.tig00000133.47","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000139.21","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000139.9","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "Cpa|evm.model.tig00000142.22","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1E (ARFA1E)","protein_coding" "Cpa|evm.model.tig00000142.7","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000144.124","No alias","Cyanophora paradoxa ","29.2.4 protein.synthesis.elongation Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants. SNOWY COTYLEDON 1 (SCO1)","protein_coding" "Cpa|evm.model.tig00000144.156","No alias","Cyanophora paradoxa ","29.1 protein.aa activation Nucleotidylyl transferase superfamily protein","protein_coding" "Cpa|evm.model.tig00000144.164","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure MINICHROMOSOME MAINTENANCE 4 (MCM4)","protein_coding" "Cpa|evm.model.tig00000144.174","No alias","Cyanophora paradoxa ","13.1.1.1.4 amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH).","protein_coding" "Cpa|evm.model.tig00000144.180","No alias","Cyanophora paradoxa ","3.8.1 minor CHO metabolism.galactose.galactokinases Encodes a protein with galactose kinase activity. The gene was shown to complement the yeast Æ’gal1 mutant defective in the galactokinase gene GAL1. GALK","protein_coding" "Cpa|evm.model.tig00000144.20","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000144.22","No alias","Cyanophora paradoxa ","29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative","protein_coding" "Cpa|evm.model.tig00000144.55","No alias","Cyanophora paradoxa ","29.2.4 protein.synthesis.elongation Translation elongation factor EFG/EF2 protein","protein_coding" "Cpa|evm.model.tig00000144.56","No alias","Cyanophora paradoxa ","29.2.4 protein.synthesis.elongation Translation elongation factor EFG/EF2 protein","protein_coding" "Cpa|evm.model.tig00000145.13","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling. VH1-interacting kinase (VIK)","protein_coding" "Cpa|evm.model.tig00000145.4","No alias","Cyanophora paradoxa ","31.1 cell.organisation PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1 both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 2 (POK2)","protein_coding" "Cpa|evm.model.tig00000147.25","No alias","Cyanophora paradoxa ","29.4.1 protein.postranslational modification.kinase encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase SNF1 kinase homolog 10 (KIN10)","protein_coding" "Cpa|evm.model.tig00000157.17","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000157.20","No alias","Cyanophora paradoxa ","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cpa|evm.model.tig00000157.60","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000157.69","No alias","Cyanophora paradoxa ","28.2 DNA.repair Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. MUTS-homologue 5 (MSH5)","protein_coding" "Cpa|evm.model.tig00000157.99","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000158.83","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000158.84","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cpa|evm.model.tig00000158.94","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000169.10","No alias","Cyanophora paradoxa ","29.1.3 protein.aa activation.threonine-tRNA ligase Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage. EMBRYO DEFECTIVE 2761 (EMB2761)","protein_coding" "Cpa|evm.model.tig00000169.15","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000169.9","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000180.27","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000189.32","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI member of Myosin-like proteins myosin XI A (XIA)","protein_coding" "Cpa|evm.model.tig00000194.22","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. RAN GTPase 3 (RAN3)","protein_coding" "Cpa|evm.model.tig00000194.25","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1)","protein_coding" "Cpa|evm.model.tig00000194.26","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1)","protein_coding" "Cpa|evm.model.tig00000194.42","No alias","Cyanophora paradoxa ","29.2.2 protein.synthesis.ribosome biogenesis GTP-binding family protein","protein_coding" "Cpa|evm.model.tig00000194.55","No alias","Cyanophora paradoxa ","29.2.4 protein.synthesis.elongation elongation factor family protein","protein_coding" "Cpa|evm.model.tig00000194.56","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000194.57","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 8 (NAP8)","protein_coding" "Cpa|evm.model.tig00000194.63","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000194.80","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins GTP-binding protein-related","protein_coding" "Cpa|evm.model.tig00000194.83","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 5 (GCN5)","protein_coding" "Cpa|evm.model.tig00000203.32","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4)","protein_coding" "Cpa|evm.model.tig00000204.104","No alias","Cyanophora paradoxa ","30.2.22 signalling.receptor kinases.proline extensin like Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00000204.32","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000204.43","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000215.44","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000215.47","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000217.25","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity. SPLAYED (SYD)","protein_coding" "Cpa|evm.model.tig00000219.51","No alias","Cyanophora paradoxa ","29.3.3 protein.targeting.chloroplast Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression. Albino or Glassy Yellow 1 (AGY1)","protein_coding" "Cpa|evm.model.tig00000227.41","No alias","Cyanophora paradoxa ","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000227.47","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000227.8","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 3 (PDR3)","protein_coding" "Cpa|evm.model.tig00000237.15","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000237.42","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000237.45","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000241.10","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast. FUS3-complementing gene 1 (FC1)","protein_coding" "Cpa|evm.model.tig00000241.101","No alias","Cyanophora paradoxa ","28.2 DNA.repair UV damage and heat induce a common stress response in plants that leads to tissue death and reduced chloroplast function. The UVH6 product is suggested to be a negative regulator of this response. ULTRAVIOLET HYPERSENSITIVE 6 (UVH6)","protein_coding" "Cpa|evm.model.tig00000241.107","No alias","Cyanophora paradoxa ","18.4.9 Co-factor and vitamine metabolism.pantothenate.dephospho-CoA kinase (DPCK) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA. ATCOAE","protein_coding" "Cpa|evm.model.tig00000241.138","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling factor18 (CHR18)","protein_coding" "Cpa|evm.model.tig00000241.22","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI member of Myosin-like proteins XIE","protein_coding" "Cpa|evm.model.tig00000241.23","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000241.38","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin. PROLIFERA (PRL)","protein_coding" "Cpa|evm.model.tig00000241.47","No alias","Cyanophora paradoxa ","29.4.1 protein.postranslational modification.kinase Mitogen activated protein kinase kinase kinase-related","protein_coding" "Cpa|evm.model.tig00000241.56","No alias","Cyanophora paradoxa ","31.1 cell.organisation Di-glucose binding protein with Kinesin motor domain","protein_coding" "Cpa|evm.model.tig00000241.70","No alias","Cyanophora paradoxa ","18.2.1 Co-factor and vitamine metabolism.thiamine.thiamine diphosphokinase Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine. thiamin pyrophosphokinase1 (TPK1)","protein_coding" "Cpa|evm.model.tig00000241.80","No alias","Cyanophora paradoxa ","27.3.12 RNA.regulation of transcription.C3H zinc finger family FMN-linked oxidoreductases superfamily protein","protein_coding" "Cpa|evm.model.tig00000246.23","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification yeast YAK1-related gene 1 (YAK1)","protein_coding" "Cpa|evm.model.tig00000248.25","No alias","Cyanophora paradoxa ","13.1.5.1.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase encodes a 3-Phosphoglycerate dehydrogenase D-3-phosphoglycerate dehydrogenase","protein_coding" "Cpa|evm.model.tig00000248.41","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000254.10","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000254.79","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. white-brown complex homolog protein 11 (WBC11)","protein_coding" "Cpa|evm.model.tig00000254.8","No alias","Cyanophora paradoxa ","13.1.2.3.22 amino acid metabolism.synthesis.glutamate family.arginine.arginosuccinate synthase arginosuccinate synthase family","protein_coding" "Cpa|evm.model.tig00000254.86","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000269.102","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 5 (GCN5)","protein_coding" "Cpa|evm.model.tig00000269.106","No alias","Cyanophora paradoxa ","31.1 cell.organisation Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity. kinesin 3 (ATK3)","protein_coding" "Cpa|evm.model.tig00000269.18","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000269.27","No alias","Cyanophora paradoxa ","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cpa|evm.model.tig00000293.10","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000293.19","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000317.8","No alias","Cyanophora paradoxa ","13.1.5.1.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase encodes a 3-Phosphoglycerate dehydrogenase D-3-phosphoglycerate dehydrogenase","protein_coding" "Cpa|evm.model.tig00000319.20","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. protein tyrosine kinase family protein","protein_coding" "Cpa|evm.model.tig00000319.21","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000339.25","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ATRX","protein_coding" "Cpa|evm.model.tig00000339.28","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000342.47","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000342.51","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000342.55","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification yeast YAK1-related gene 1 (YAK1)","protein_coding" "Cpa|evm.model.tig00000344.3","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ARF1A1C","protein_coding" "Cpa|evm.model.tig00000350.17","No alias","Cyanophora paradoxa ","11.1.1.1 lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme acetyl-CoA carboxylase 2 (ACC2) acetyl-CoA carboxylase 2 (ACC2)","protein_coding" "Cpa|evm.model.tig00000350.18","No alias","Cyanophora paradoxa ","11.1.1.1 lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation. acetyl-CoA carboxylase 1 (ACC1)","protein_coding" "Cpa|evm.model.tig00000350.28","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000350.40","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000350.9","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000361.14","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000361.63","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 3 (PDR3)","protein_coding" "Cpa|evm.model.tig00000361.77","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000367.13","No alias","Cyanophora paradoxa ","31.1 cell.organisation Microtubule motor kinesin PAKRP1/Kinesin-12A. Together with PAKRP1L/Kinesin-12B, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast. phragmoplast-associated kinesin-related protein 1 (PAKRP1)","protein_coding" "Cpa|evm.model.tig00000367.45","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner. myosin 2 (MYA2)","protein_coding" "Cpa|evm.model.tig00000367.48","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000378.15","No alias","Cyanophora paradoxa ","29.1.17 protein.aa activation.glutamate-tRNA ligase Glutamyl/glutaminyl-tRNA synthetase, class Ic","protein_coding" "Cpa|evm.model.tig00000378.16","No alias","Cyanophora paradoxa ","29.1.17 protein.aa activation.glutamate-tRNA ligase Glutamyl/glutaminyl-tRNA synthetase, class Ic","protein_coding" "Cpa|evm.model.tig00000378.31","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000383.112","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 5 (GCN5)","protein_coding" "Cpa|evm.model.tig00000383.46","No alias","Cyanophora paradoxa ","29.2.2 protein.synthesis.ribosome biogenesis Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress. The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues. protein-serine kinase 1 (PK1)","protein_coding" "Cpa|evm.model.tig00000383.49","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000383.51","No alias","Cyanophora paradoxa ","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus member of GCN subfamily GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1)","protein_coding" "Cpa|evm.model.tig00000383.57","No alias","Cyanophora paradoxa ","29.2.4 protein.synthesis.elongation Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding" "Cpa|evm.model.tig00000383.60","No alias","Cyanophora paradoxa ","2.2.2.3 major CHO metabolism.degradation.starch.glucan water dikinase Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position. STARCH EXCESS 1 (SEX1)","protein_coding" "Cpa|evm.model.tig00000383.82","No alias","Cyanophora paradoxa ","31.1 cell.organisation Encodes a kinesin-like protein. ZCF125","protein_coding" "Cpa|evm.model.tig00000383.87","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00000385.35","No alias","Cyanophora paradoxa ","11.1.1.1 lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme acetyl-CoA carboxylase 2 (ACC2) acetyl-CoA carboxylase 2 (ACC2)","protein_coding" "Cpa|evm.model.tig00000388.43","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000391.31","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000391.4","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification yeast YAK1-related gene 1 (YAK1)","protein_coding" "Cpa|evm.model.tig00000396.4","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000396.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000396.8","No alias","Cyanophora paradoxa ","30.1 signalling.in sugar and nutrient physiology encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase SNF1 kinase homolog 10 (KIN10)","protein_coding" "Cpa|evm.model.tig00000402.13","No alias","Cyanophora paradoxa ","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "Cpa|evm.model.tig00000402.14","No alias","Cyanophora paradoxa ","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "Cpa|evm.model.tig00000402.19","No alias","Cyanophora paradoxa ","11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases. acyl-CoA-binding protein 6 (ACBP6)","protein_coding" "Cpa|evm.model.tig00000402.37","No alias","Cyanophora paradoxa ","29.1.9 protein.aa activation.valine-tRNA ligase embryo defective 2247 (EMB2247)","protein_coding" "Cpa|evm.model.tig00000402.38","No alias","Cyanophora paradoxa ","29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins. ADP-ribosylation factor C1 (ARFC1)","protein_coding" "Cpa|evm.model.tig00000403.82","No alias","Cyanophora paradoxa ","29.2.2 protein.synthesis.ribosome biogenesis ATPasesnucleotide bindingATP bindingnucleoside-triphosphatasestranscription factor binding","protein_coding" "Cpa|evm.model.tig00000403.92","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2 (TAP2)","protein_coding" "Cpa|evm.model.tig00000404.28","No alias","Cyanophora paradoxa ","30.2.16 signalling.receptor kinases.Catharanthus roseus-like RLK1 Encodes HERCULES1 (HERK1), a receptor kinase regulated by Brassinosteroids and required for cell elongation during vegetative growth. hercules receptor kinase 1 (HERK1)","protein_coding" "Cpa|evm.model.tig00000404.39","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000404.40","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000405.48","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000411.13","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000411.2","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000411.20","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000411.24","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000430.15","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase that negatively regulates the entry into mitosis. WEE1 kinase homolog (WEE1)","protein_coding" "Cpa|evm.model.tig00000430.48","No alias","Cyanophora paradoxa ","31.1 cell.organisation encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches. ZWICHEL (ZWI)","protein_coding" "Cpa|evm.model.tig00000430.63","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000441.12","No alias","Cyanophora paradoxa ","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases DEA(D/H)-box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00000441.21","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling 24 (CHR24)","protein_coding" "Cpa|evm.model.tig00000444.17","No alias","Cyanophora paradoxa ","28.2 DNA.repair recA DNA recombination family protein","protein_coding" "Cpa|evm.model.tig00000448.35","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000451.14","No alias","Cyanophora paradoxa ","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "Cpa|evm.model.tig00000451.15","No alias","Cyanophora paradoxa ","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "Cpa|evm.model.tig00000455.1","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000455.18","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins RAB GTPase homolog 1C (RAB1C)","protein_coding" "Cpa|evm.model.tig00000455.19","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins RAB GTPase homolog 1C (RAB1C)","protein_coding" "Cpa|evm.model.tig00000455.36","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000455.8","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Encodes a protein with similarity to GTPases that is localized to the mitochondrion. Involved in embryogenesis, pollen tube growth and required for mitochondrial development. MIRO-related GTP-ase 1 (MIRO1)","protein_coding" "Cpa|evm.model.tig00000459.102","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000459.55","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000459.90","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 1 (PDR1)","protein_coding" "Cpa|evm.model.tig00000478.13","No alias","Cyanophora paradoxa ","29.1.14 protein.aa activation.glycine-tRNA ligase glycyl-tRNA synthetase / glycine--tRNA ligase","protein_coding" "Cpa|evm.model.tig00000478.36","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00000478.40","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure switch 2 (SWI2)","protein_coding" "Cpa|evm.model.tig00000480.36","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00000480.47","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000480.8","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000489.13","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000489.16","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000489.17","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000489.18","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000489.19","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000492.69","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00000492.71","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00000492.73","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00000492.75","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00000498.100","No alias","Cyanophora paradoxa ","27.3.12 RNA.regulation of transcription.C3H zinc finger family FMN-linked oxidoreductases superfamily protein","protein_coding" "Cpa|evm.model.tig00000498.40","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000498.41","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000498.65","No alias","Cyanophora paradoxa ","5.2 fermentation.PDC pyruvate decarboxylase-2 pyruvate decarboxylase-2 (PDC2)","protein_coding" "Cpa|evm.model.tig00000498.87","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Encodes Ara7. ARA7","protein_coding" "Cpa|evm.model.tig00000498.88","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification yeast YAK1-related gene 1 (YAK1)","protein_coding" "Cpa|evm.model.tig00000498.99","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00000507.34","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification member of MEKK subfamily NPK1-related protein kinase 2 (NP2)","protein_coding" "Cpa|evm.model.tig00000523.20","No alias","Cyanophora paradoxa ","13.2.2.3 amino acid metabolism.degradation.glutamate family.arginine Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism. ornithine-delta-aminotransferase (DELTA-OAT)","protein_coding" "Cpa|evm.model.tig00000523.27","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cpa|evm.model.tig00000523.28","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000525.10","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type AAA-type ATPase - Over 90% homologous to CDC48a cell division cycle 48C (CDC48C)","protein_coding" "Cpa|evm.model.tig00000526.15","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000540.15","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000545.10","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein. AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress. ATCHR12","protein_coding" "Cpa|evm.model.tig00000545.20","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000545.9","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000551.14","No alias","Cyanophora paradoxa ","31.1 cell.organisation encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. FRAGILE FIBER 1 (FRA1)","protein_coding" "Cpa|evm.model.tig00000552.21","No alias","Cyanophora paradoxa ","28.99 DNA.unspecified DEAD/DEAH box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00000553.34","No alias","Cyanophora paradoxa ","25.8 C1-metabolism.tetrahydrofolate synthase Encodes a dihydrofolate synthetase based on yeast complementation experiments. This protein is involved in folate biosynthesis. GLOBULAR ARREST1 (GLA1)","protein_coding" "Cpa|evm.model.tig00000553.40","No alias","Cyanophora paradoxa ","31.1 cell.organisation encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. FRAGILE FIBER 1 (FRA1)","protein_coding" "Cpa|evm.model.tig00000571.26","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ATRX","protein_coding" "Cpa|evm.model.tig00000571.47","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification TCP-1/cpn60 chaperonin family protein","protein_coding" "Cpa|evm.model.tig00000571.48","No alias","Cyanophora paradoxa ","29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins. ADP-ribosylation factor C1 (ARFC1)","protein_coding" "Cpa|evm.model.tig00000572.4","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000572.5","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000581.32","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000601.10","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase family protein with ARM repeat domain","protein_coding" "Cpa|evm.model.tig00000601.6","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a CBL-interacting protein kinase with similarity to SOS2 CBL-interacting protein kinase 9 (CIPK9)","protein_coding" "Cpa|evm.model.tig00000605.2","No alias","Cyanophora paradoxa ","28.2 DNA.repair Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination. homolog of RAD54 (RAD54)","protein_coding" "Cpa|evm.model.tig00000607.15","No alias","Cyanophora paradoxa ","29.1.10 protein.aa activation.methionine-tRNA ligase OVULE ABORTION 1 (OVA1)","protein_coding" "Cpa|evm.model.tig00000615.26","No alias","Cyanophora paradoxa ","28.99 DNA.unspecified Encodes RECQ3, an ATP-dependent helicase. RecQl3","protein_coding" "Cpa|evm.model.tig00000615.38","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality. YODA (YDA)","protein_coding" "Cpa|evm.model.tig00000615.40","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000615.43","No alias","Cyanophora paradoxa ","29.2.2.3.1 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.snoRNPs P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000615.52","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000615.55","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2) structural maintenance of chromosomes 2 (SMC2)","protein_coding" "Cpa|evm.model.tig00000615.68","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes. SGP1","protein_coding" "Cpa|evm.model.tig00000615.79","No alias","Cyanophora paradoxa ","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cpa|evm.model.tig00000615.8","No alias","Cyanophora paradoxa ","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves. aspartate aminotransferase 3 (ASP3)","protein_coding" "Cpa|evm.model.tig00000615.80","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000630.40","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000654.30","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2 (TAP2)","protein_coding" "Cpa|evm.model.tig00000655.27","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000655.28","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000655.31","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000655.32","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Similar to yeast Sen1 (splicing endonuclease 1)helicase protein. Involved in female gametophyte development. MAGATAMA 3 (MAA3)","protein_coding" "Cpa|evm.model.tig00000655.53","No alias","Cyanophora paradoxa ","30.3 signalling.calcium predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. calmodulin-domain protein kinase cdpk isoform 2 (CPK2)","protein_coding" "Cpa|evm.model.tig00000655.63","No alias","Cyanophora paradoxa ","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000655.65","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors DNA/RNA helicase protein","protein_coding" "Cpa|evm.model.tig00000658.2","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000663.14","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000663.21","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ARFA1D","protein_coding" "Cpa|evm.model.tig00000663.24","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000663.66","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000670.31","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000681.7","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000681.8","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cpa|evm.model.tig00000691.35","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein. AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress. ATCHR12","protein_coding" "Cpa|evm.model.tig00000691.8","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00000692.13","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000692.27","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins tRNA modification GTPase, putative","protein_coding" "Cpa|evm.model.tig00000692.51","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cpa|evm.model.tig00000704.23","No alias","Cyanophora paradoxa ","29.5.7 protein.degradation.metalloprotease encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes. FTSH protease 1 (FTSH1)","protein_coding" "Cpa|evm.model.tig00000704.34","No alias","Cyanophora paradoxa ","29.2.2 protein.synthesis.ribosome biogenesis Ribosomal protein S5/Elongation factor G/III/V family protein","protein_coding" "Cpa|evm.model.tig00000711.27","No alias","Cyanophora paradoxa ","13.2.4.4 amino acid metabolism.degradation.branched chain group.leucine Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate. isovaleryl-CoA-dehydrogenase (IVD)","protein_coding" "Cpa|evm.model.tig00000711.41","No alias","Cyanophora paradoxa ","31.2 cell.division member of SMC subfamily structural maintenance of chromosome 3 (SMC3)","protein_coding" "Cpa|evm.model.tig00000711.45","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2 (TAP2)","protein_coding" "Cpa|evm.model.tig00000711.46","No alias","Cyanophora paradoxa ","31.2 cell.division Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. TITAN7 (TTN7)","protein_coding" "Cpa|evm.model.tig00000711.53","No alias","Cyanophora paradoxa ","31.1 cell.organisation Microtubule motor kinesin PAKRP1L/Kinesin-12B. Together with PAKRP1/Kinesin-12A, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast. KINESIN-12B","protein_coding" "Cpa|evm.model.tig00000711.69","No alias","Cyanophora paradoxa ","28.2 DNA.repair Helicase protein with RING/U-box domain","protein_coding" "Cpa|evm.model.tig00000711.7","No alias","Cyanophora paradoxa ","29.1.19 protein.aa activation.arginine-tRNA ligase embryo defective 1027 (emb1027)","protein_coding" "Cpa|evm.model.tig00000711.72","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000718.1","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cpa|evm.model.tig00000718.2","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cpa|evm.model.tig00000718.3","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 8 (MRP8)","protein_coding" "Cpa|evm.model.tig00000718.42","No alias","Cyanophora paradoxa ","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000718.6","No alias","Cyanophora paradoxa ","29.5.11.20 protein.degradation.ubiquitin.proteasom AAA-type ATPase family protein","protein_coding" "Cpa|evm.model.tig00000718.70","No alias","Cyanophora paradoxa ","29.2.2 protein.synthesis.ribosome biogenesis Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. Arabidopsis thaliana protein kinase 19 (ATPK19)","protein_coding" "Cpa|evm.model.tig00000733.15","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ATRX","protein_coding" "Cpa|evm.model.tig00000737.17","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000737.5","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Origin Recognition Complex subunit 1b. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with ORC2 and ORC5. Highly expressed in proliferating cells. Expression levels are independent of light regime. origin of replication complex 1B (ORC1B)","protein_coding" "Cpa|evm.model.tig00000741.30","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000741.4","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 21 (PGP21)","protein_coding" "Cpa|evm.model.tig00000754.29","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins RAB GTPase homolog G3C (RABG3c)","protein_coding" "Cpa|evm.model.tig00000769.1","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cpa|evm.model.tig00000769.22","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000769.47","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000788.20","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000788.32","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000789.12","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cpa|evm.model.tig00000789.15","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. helicasesATP-dependent helicasesnucleic acid bindingATP bindingDNA-directed DNA polymerasesDNA binding","protein_coding" "Cpa|evm.model.tig00000789.26","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000789.37","No alias","Cyanophora paradoxa ","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cpa|evm.model.tig00000789.41","No alias","Cyanophora paradoxa ","28.99 DNA.unspecified DEAD/DEAH box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00000792.2","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000792.27","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure DNA GYRASE B2","protein_coding" "Cpa|evm.model.tig00000792.28","No alias","Cyanophora paradoxa ","29.5.11.20 protein.degradation.ubiquitin.proteasom 26S proteasome AAA-ATPase subunit regulatory particle triple-A ATPase 6A (RPT6A)","protein_coding" "Cpa|evm.model.tig00000792.35","No alias","Cyanophora paradoxa ","29.2.2.2.1 protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases DEA(D/H)-box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00000792.5","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000792.57","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000796.8","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000802.10","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000802.13","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000802.4","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000802.45","No alias","Cyanophora paradoxa ","35.1 not assigned.no ontology Molybdenum cofactor sulfurase family protein","protein_coding" "Cpa|evm.model.tig00000802.67","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes AtCHR12, a SNF2/Brahma-type chromatin-remodeling protein. AtCHR12 mediates temporary growth arrest in Arabidopsis upon perceiving environmental stress. ATCHR12","protein_coding" "Cpa|evm.model.tig00000806.38","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ARFA1D","protein_coding" "Cpa|evm.model.tig00000806.47","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000808.1","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000808.17","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cpa|evm.model.tig00000808.44","No alias","Cyanophora paradoxa ","16.1.2.6 secondary metabolism.isoprenoids.mevalonate pathway.mevalonate diphosphate decarboxylase GHMP kinase family protein","protein_coding" "Cpa|evm.model.tig00000808.46","No alias","Cyanophora paradoxa ","26.17 misc.dynamin Encodes a dynamin related protein. DRPs are self-assembling GTPasse involved in fission and fusion of membranes. DRP3B functions in mitochondrion and peroxisome fission in combination with DRP3A. dynamin related protein (DRP3B)","protein_coding" "Cpa|evm.model.tig00000821.69","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000823.22","No alias","Cyanophora paradoxa ","11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids dihydrosphingosine phosphate lyase (DPL1)","protein_coding" "Cpa|evm.model.tig00000826.15","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000826.18","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000826.20","No alias","Cyanophora paradoxa ","28.2 DNA.repair Helicase protein with RING/U-box domain","protein_coding" "Cpa|evm.model.tig00000828.27","No alias","Cyanophora paradoxa ","13.1.5.1.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase encodes a 3-Phosphoglycerate dehydrogenase D-3-phosphoglycerate dehydrogenase","protein_coding" "Cpa|evm.model.tig00000828.28","No alias","Cyanophora paradoxa ","29.1 protein.aa activation ovule abortion 4 (OVA4)","protein_coding" "Cpa|evm.model.tig00000829.22","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000829.30","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a microtubule-associated kinase-like protein RUNKEL (RUK).","protein_coding" "Cpa|evm.model.tig00000836.12","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000836.8","No alias","Cyanophora paradoxa ","33.99 development.unspecified RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1)","protein_coding" "Cpa|evm.model.tig00000842.11","No alias","Cyanophora paradoxa ","29.2.3 protein.synthesis.initiation Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal. fu-gaeri1 (FUG1)","protein_coding" "Cpa|evm.model.tig00000842.20","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000842.22","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000842.25","No alias","Cyanophora paradoxa ","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cpa|evm.model.tig00000842.57","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000851.16","No alias","Cyanophora paradoxa ","31.1 cell.organisation Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis. TETRASPORE (TES)","protein_coding" "Cpa|evm.model.tig00000852.8","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000857.14","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000857.17","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000857.29","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000863.1","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000863.11","No alias","Cyanophora paradoxa ","31.2 cell.division cyclin-dependent kinase D13 (CDKD13)","protein_coding" "Cpa|evm.model.tig00000863.2","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ROOT GROWTH DEFECTIVE 3 (RGD3)","protein_coding" "Cpa|evm.model.tig00000863.37","No alias","Cyanophora paradoxa ","23.1.2.20 nucleotide metabolism.synthesis.purine.adenylosuccinate synthase encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate) adenylosuccinate synthase (ADSS)","protein_coding" "Cpa|evm.model.tig00000865.27","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure embryo defective 1507 (emb1507)","protein_coding" "Cpa|evm.model.tig00000865.28","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure embryo defective 1507 (emb1507)","protein_coding" "Cpa|evm.model.tig00000865.48","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000865.51","No alias","Cyanophora paradoxa ","29.1.4 protein.aa activation.leucine-tRNA ligase EMBRYO DEFECTIVE 2369 (EMB2369)","protein_coding" "Cpa|evm.model.tig00000880.47","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000880.52","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000880.54","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000882.2","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins A new plant-specific member of the dynamin superfamily defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization. FZO-like (FZL)","protein_coding" "Cpa|evm.model.tig00000882.29","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000889.42","No alias","Cyanophora paradoxa ","26.7 misc.oxidases - copper, flavone etc Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo. FAD-linked oxidases family protein","protein_coding" "Cpa|evm.model.tig00000893.7","No alias","Cyanophora paradoxa ","29.5.5 protein.degradation.serine protease CLP protease regulatory subunit CLPX mRNA, nuclear gene CLP protease regulatory subunit X (CLPX)","protein_coding" "Cpa|evm.model.tig00000900.8","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 3 (PDR3)","protein_coding" "Cpa|evm.model.tig00000903.43","No alias","Cyanophora paradoxa ","20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. CR88","protein_coding" "Cpa|evm.model.tig00000911.11","No alias","Cyanophora paradoxa ","31.1 cell.organisation encodes a novel member of the kinesin superfamily of motor proteins. recessive mutations have reduced number of trichome branches. ZWICHEL (ZWI)","protein_coding" "Cpa|evm.model.tig00000912.22","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Small GTP-binding protein","protein_coding" "Cpa|evm.model.tig00000912.41","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000923.1","No alias","Cyanophora paradoxa ","13.1.6.2 amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "Cpa|evm.model.tig00000923.8","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins GTP-binding protein ATGB2 GTP-binding 2 (GB2)","protein_coding" "Cpa|evm.model.tig00000939.10","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000939.11","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000940.2","No alias","Cyanophora paradoxa ","29.1.5 protein.aa activation.isoleucine-tRNA ligase ovule abortion 2 (OVA2)","protein_coding" "Cpa|evm.model.tig00000944.3","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure DNA GYRASE A (GYRA)","protein_coding" "Cpa|evm.model.tig00000949.17","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000949.18","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000949.19","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Ras-related small GTP-binding family protein","protein_coding" "Cpa|evm.model.tig00000949.23","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 5 (GCN5)","protein_coding" "Cpa|evm.model.tig00000949.3","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification yeast YAK1-related gene 1 (YAK1)","protein_coding" "Cpa|evm.model.tig00000949.46","No alias","Cyanophora paradoxa ","5.2 fermentation.PDC pyruvate decarboxylase-2 pyruvate decarboxylase-2 (PDC2)","protein_coding" "Cpa|evm.model.tig00000949.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000955.1","No alias","Cyanophora paradoxa ","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "Cpa|evm.model.tig00000955.22","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000955.23","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Guanylate-binding family protein","protein_coding" "Cpa|evm.model.tig00000955.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000955.33","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000955.4","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000955.6","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000970.17","No alias","Cyanophora paradoxa ","29.2.3 protein.synthesis.initiation member of eIF4A - eukaryotic initiation factor 4A eif4a-2 (EIF4A-2)","protein_coding" "Cpa|evm.model.tig00000970.30","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Similar to POL2A, DNA polymerase epsilon catalytic subunit. Essential for Arabidopsis growth. Null homozygotes are embryo lethal, partial loss of function alleles show embryo patterning defects such as root pole displacement. Delayed progression through cell cycle results in embryos with smaller numbers of larger cells. TILTED 1 (TIL1)","protein_coding" "Cpa|evm.model.tig00000983.12","No alias","Cyanophora paradoxa ","29.1.22 protein.aa activation.asparagine-tRNA ligase Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis. NS1","protein_coding" "Cpa|evm.model.tig00000983.26","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure chromatin remodeling 5 (CHR5)","protein_coding" "Cpa|evm.model.tig00000983.30","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Ras-related small GTP-binding family protein","protein_coding" "Cpa|evm.model.tig00000984.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000984.9","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000985.5","No alias","Cyanophora paradoxa ","26.17 misc.dynamin Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. dynamin-related protein 3A (DRP3A)","protein_coding" "Cpa|evm.model.tig00000985.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00000989.11","No alias","Cyanophora paradoxa ","29.5.11.20 protein.degradation.ubiquitin.proteasom P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00000989.19","No alias","Cyanophora paradoxa ","29.6 protein.folding embryo defective 1241 (EMB1241)","protein_coding" "Cpa|evm.model.tig00000989.25","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure PICKLE RELATED 2 (PKR2)","protein_coding" "Cpa|evm.model.tig00000989.4","No alias","Cyanophora paradoxa ","20.2.1 stress.abiotic.heat Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. heat shock protein 90.1 (HSP90.1)","protein_coding" "Cpa|evm.model.tig00000989.8","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001001.13","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001001.21","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1)","protein_coding" "Cpa|evm.model.tig00001001.25","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins member of RAB gene family RAB GTPase homolog B1C (RABB1C)","protein_coding" "Cpa|evm.model.tig00001003.22","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00001007.12","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00001017.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001024.2","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 10 (MRP10)","protein_coding" "Cpa|evm.model.tig00001024.28","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. protein tyrosine kinase family protein","protein_coding" "Cpa|evm.model.tig00001027.29","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure plant DEAD box-like RNA helicase. RNA helicase 1 (RH1)","protein_coding" "Cpa|evm.model.tig00001029.10","No alias","Cyanophora paradoxa ","23.1.2.20 nucleotide metabolism.synthesis.purine.adenylosuccinate synthase encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate) adenylosuccinate synthase (ADSS)","protein_coding" "Cpa|evm.model.tig00001029.15","No alias","Cyanophora paradoxa ","23.3.1.3 nucleotide metabolism.salvage.phosphoribosyltransferases.upp Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities. uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1)","protein_coding" "Cpa|evm.model.tig00001029.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001030.1","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00001030.11","No alias","Cyanophora paradoxa ","30.3 signalling.calcium unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus recombinant protein is fully active and induced by Ca2+ calmodulin-like domain protein kinase 9 (CDPK9)","protein_coding" "Cpa|evm.model.tig00001030.25","No alias","Cyanophora paradoxa ","21.2.2 redox.ascorbate and glutathione.glutathione Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol. glutathione synthetase 2 (GSH2)","protein_coding" "Cpa|evm.model.tig00001042.1","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001042.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001049.35","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase DEA(D/H)-box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00001049.7","No alias","Cyanophora paradoxa ","13.1.3.4.2 amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase Encodes second enzyme in the methionine biosynthetic pathway cystathionine beta-lyase (CBL)","protein_coding" "Cpa|evm.model.tig00001065.1","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001065.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001065.37","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001065.5","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001065.8","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001065.9","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001067.30","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001071.15","No alias","Cyanophora paradoxa ","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00001085.1","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00001085.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001085.32","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily GENERAL CONTROL NON-REPRESSIBLE 2 (GCN2)","protein_coding" "Cpa|evm.model.tig00001086.13","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001086.27","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001086.33","No alias","Cyanophora paradoxa ","29.1.7 protein.aa activation.alanine-tRNA ligase A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. EMBRYO DEFECTIVE 1030 (EMB1030)","protein_coding" "Cpa|evm.model.tig00001086.36","No alias","Cyanophora paradoxa ","26.17 misc.dynamin Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. dynamin-related protein 3A (DRP3A)","protein_coding" "Cpa|evm.model.tig00001086.37","No alias","Cyanophora paradoxa ","26.17 misc.dynamin Encodes a dynamin related protein. DRPs are self-assembling GTPasse involved in fission and fusion of membranes. DRP3B functions in mitochondrion and peroxisome fission in combination with DRP3A. dynamin related protein (DRP3B)","protein_coding" "Cpa|evm.model.tig00001086.5","No alias","Cyanophora paradoxa ","12.4 N-metabolism.misc FMN-linked oxidoreductases superfamily protein","protein_coding" "Cpa|evm.model.tig00001086.6","No alias","Cyanophora paradoxa ","29.6 protein.folding unknown function AR192","protein_coding" "Cpa|evm.model.tig00001086.7","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure RNAhelicase-like 8 (RH8)","protein_coding" "Cpa|evm.model.tig00001086.8","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001093.11","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification encodes a SHAGGY-like kinase involved in meristem organization. ATSK12","protein_coding" "Cpa|evm.model.tig00001093.2","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner ADP-ribosylation factor 3 (ARF3)","protein_coding" "Cpa|evm.model.tig00001094.6","No alias","Cyanophora paradoxa ","29.1.11 protein.aa activation.serine-tRNA ligase Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. Seryl-tRNA synthetase (SRS)","protein_coding" "Cpa|evm.model.tig00001095.16","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001098.11","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001107.20","No alias","Cyanophora paradoxa ","1.3.13 PS.calvin cycle.rubisco interacting Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. chaperonin-60alpha (CPN60A)","protein_coding" "Cpa|evm.model.tig00001107.26","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ROOT GROWTH DEFECTIVE 3 (RGD3)","protein_coding" "Cpa|evm.model.tig00001110.8","No alias","Cyanophora paradoxa ","12.4 N-metabolism.misc FMN-linked oxidoreductases superfamily protein","protein_coding" "Cpa|evm.model.tig00001126.7","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001127.30","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001130.5","No alias","Cyanophora paradoxa ","29.1.9 protein.aa activation.valine-tRNA ligase Required for proper proliferation of basal cells. TWIN 2 (TWN2)","protein_coding" "Cpa|evm.model.tig00001130.9","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins A member of ROP GTPase gene family. Arabidopsis RAC-like 9 (ARAC9)","protein_coding" "Cpa|evm.model.tig00001154.2","No alias","Cyanophora paradoxa ","35.1 not assigned.no ontology Oligosaccharyltransferase complex/magnesium transporter family protein","protein_coding" "Cpa|evm.model.tig00001154.22","No alias","Cyanophora paradoxa ","35.2 not assigned.unknown RNA bindingGTP binding","protein_coding" "Cpa|evm.model.tig00001155.2","No alias","Cyanophora paradoxa ","28.99 DNA.unspecified RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding" "Cpa|evm.model.tig00001155.21","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins RAB GTPase homolog B1A (RABB1a)","protein_coding" "Cpa|evm.model.tig00001164.1","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001164.12","No alias","Cyanophora paradoxa ","31.1 cell.organisation Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis. TETRASPORE (TES)","protein_coding" "Cpa|evm.model.tig00001178.3","No alias","Cyanophora paradoxa ","13.1.6.2 amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "Cpa|evm.model.tig00001181.28","No alias","Cyanophora paradoxa ","16.1.2.5 secondary metabolism.isoprenoids.mevalonate pathway.phosphomevalonate kinase GHMP kinase family protein","protein_coding" "Cpa|evm.model.tig00001187.20","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001206.27","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001206.28","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001214.11","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily ATNAP13","protein_coding" "Cpa|evm.model.tig00001214.18","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00001224.1","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001224.10","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001224.16","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001224.22","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase Similar in sequence to DEAD-box RNA helicases. Binds RNA. Involved in drought, salt and cold stress responses. STRESS RESPONSE SUPPRESSOR 2 (STRS2)","protein_coding" "Cpa|evm.model.tig00001224.8","No alias","Cyanophora paradoxa ","28.2 DNA.repair Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7. MUTS homolog 2 (MSH2)","protein_coding" "Cpa|evm.model.tig00001229.16","No alias","Cyanophora paradoxa ","16.1.3 secondary metabolism.isoprenoids.tocopherol biosynthesis Tyrosine transaminase family protein","protein_coding" "Cpa|evm.model.tig00001229.21","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00001229.23","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001234.10","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes. MAP kinase 6 (MPK6)","protein_coding" "Cpa|evm.model.tig00001234.16","No alias","Cyanophora paradoxa ","19.3 tetrapyrrole synthesis.GSA Encodes a protein with homology to glutamate-1-semialdehyde 2,1-aminomutase catalyzing the conversion of glutamate-1-semialdehyde (GSA) into 5-amino levulinate. The expression of this gene was demonstrated to be light-induced.","protein_coding" "Cpa|evm.model.tig00001249.13","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition SALT OVERLY SENSITIVE 2 (SOS2)","protein_coding" "Cpa|evm.model.tig00001249.16","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI member of Myosin-like proteins myosin 1 (ATM1)","protein_coding" "Cpa|evm.model.tig00001249.4","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001250.11","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001254.7","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim. multidrug resistance-associated protein 4 (MRP4)","protein_coding" "Cpa|evm.model.tig00001254.8","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001265.21","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001269.7","No alias","Cyanophora paradoxa ","29.6 protein.folding mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria. heat shock protein 60 (HSP60)","protein_coding" "Cpa|evm.model.tig00001278.14","No alias","Cyanophora paradoxa ","18.2.1 Co-factor and vitamine metabolism.thiamine.thiamine diphosphokinase Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine. thiamin pyrophosphokinase 2 (TPK2)","protein_coding" "Cpa|evm.model.tig00001278.5","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001284.3","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00001292.10","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001292.17","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification casein kinase II catalytic subunit alpha casein kinase alpha 1 (CKA1)","protein_coding" "Cpa|evm.model.tig00001292.5","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling 24 (CHR24)","protein_coding" "Cpa|evm.model.tig00001299.13","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001302.4","No alias","Cyanophora paradoxa ","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00001302.5","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001304.2","No alias","Cyanophora paradoxa ","28.2 DNA.repair Helicase protein with RING/U-box domain","protein_coding" "Cpa|evm.model.tig00001307.3","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules. mitogen-activated protein kinase kinase kinase 7 (MAPKKK7)","protein_coding" "Cpa|evm.model.tig00001310.3","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00001331.9","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase that negatively regulates the entry into mitosis. WEE1 kinase homolog (WEE1)","protein_coding" "Cpa|evm.model.tig00001333.30","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type Necessary for sister chromatid cohesion. Acts in synergy with ETG1. CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)","protein_coding" "Cpa|evm.model.tig00001336.19","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001339.14","No alias","Cyanophora paradoxa ","26.10 misc.cytochrome P450 Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism. P450 reductase 1 (ATR1)","protein_coding" "Cpa|evm.model.tig00001339.19","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases MAP kinase MAP kinase 5 (MPK5)","protein_coding" "Cpa|evm.model.tig00001339.2","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2. CBL-interacting protein kinase 1 (CIPK1)","protein_coding" "Cpa|evm.model.tig00001339.22","No alias","Cyanophora paradoxa ","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles. eukaryotic initiation factor 4A-III (EIF4A-III)","protein_coding" "Cpa|evm.model.tig00001339.3","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00001339.33","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001339.7","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro. mitogen-activated protein kinase 3 (MPK3)","protein_coding" "Cpa|evm.model.tig00001365.11","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001365.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001366.20","No alias","Cyanophora paradoxa ","31.1 cell.organisation PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1 both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 2 (POK2)","protein_coding" "Cpa|evm.model.tig00001368.15","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "Cpa|evm.model.tig00001371.16","No alias","Cyanophora paradoxa ","29.1.1 protein.aa activation.tyrosine-tRNA ligase Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial","protein_coding" "Cpa|evm.model.tig00001371.6","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a CBL-interacting protein kinase with similarity to SOS2 CBL-interacting protein kinase 9 (CIPK9)","protein_coding" "Cpa|evm.model.tig00001371.7","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification encodes a serine-threonine protein kinase whose expression increases in response to abscisic acid, cold, drought, high salt, and wounding conditions. The gene is expressed in developing seeds and seedlings. Lines carrying a T-DNA insertions have reduced germination efficiency and expression of cold, high-salt, and abscisic acid marker genes are altered, but not drought-response markers. CBL-interacting protein kinase 3 (CIPK3)","protein_coding" "Cpa|evm.model.tig00001371.8","No alias","Cyanophora paradoxa ","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cpa|evm.model.tig00001376.12","No alias","Cyanophora paradoxa ","33.99 development.unspecified Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis. MURE","protein_coding" "Cpa|evm.model.tig00001376.20","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure DEAD/DEAH box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00001376.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001388.17","No alias","Cyanophora paradoxa ","29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO DEFECTIVE 2768 (emb2768)","protein_coding" "Cpa|evm.model.tig00001408.10","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins RAB GTPase homolog 1A (RAB1A)","protein_coding" "Cpa|evm.model.tig00001408.23","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001413.2","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001413.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001415.15","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant. RAB6A","protein_coding" "Cpa|evm.model.tig00001416.4","No alias","Cyanophora paradoxa ","20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3 (CLPB3)","protein_coding" "Cpa|evm.model.tig00001416.6","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cpa|evm.model.tig00001416.8","No alias","Cyanophora paradoxa ","29.5.5 protein.degradation.serine protease Encodes a nuclear encoded protein with similarity to Clpa regulatory subunit of CLP protease complex. The protein is localized to the chloroplast stroma. May function redundantly with TIC complex in chloroplast protein import. HSP93-III","protein_coding" "Cpa|evm.model.tig00001424.10","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 14 (NAP14)","protein_coding" "Cpa|evm.model.tig00001424.9","No alias","Cyanophora paradoxa ","25.2 C1-metabolism.formate-tetrahydrofolate ligase 10-formyltetrahydrofolate synthetase (THFS) mRNA, complete","protein_coding" "Cpa|evm.model.tig00001466.1","No alias","Cyanophora paradoxa ","29.1.14 protein.aa activation.glycine-tRNA ligase glycine-tRNA ligase EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1)","protein_coding" "Cpa|evm.model.tig00001467.20","No alias","Cyanophora paradoxa ","13.2.4.4 amino acid metabolism.degradation.branched chain group.leucine MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion. MCCA","protein_coding" "Cpa|evm.model.tig00001467.21","No alias","Cyanophora paradoxa ","18.6.1 Co-factor and vitamine metabolism.biotin.biotin synthase Catalyzes the conversion of dethiobiotin to biotin. BIOTIN AUXOTROPH 2 (BIO2)","protein_coding" "Cpa|evm.model.tig00001467.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001486.3","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a predicted protein kinase based on sequence similarity. putative protein kinase 1 (PPK1)","protein_coding" "Cpa|evm.model.tig00001493.7","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Encodes Ara7. ARA7","protein_coding" "Cpa|evm.model.tig00001497.9","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001537.10","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001545.7","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure EMBRYO DEFECTIVE 2780 (EMB2780)","protein_coding" "Cpa|evm.model.tig00001574.2","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00001576.14","No alias","Cyanophora paradoxa ","29.1.40 protein.aa activation.bifunctional aminoacyl-tRNA synthetase OVULE ABORTION 6 (OVA6)","protein_coding" "Cpa|evm.model.tig00001576.15","No alias","Cyanophora paradoxa ","29.1.40 protein.aa activation.bifunctional aminoacyl-tRNA synthetase OVULE ABORTION 6 (OVA6)","protein_coding" "Cpa|evm.model.tig00001600.13","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases MAP kinase MAP kinase 5 (MPK5)","protein_coding" "Cpa|evm.model.tig00001600.9","No alias","Cyanophora paradoxa ","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the mitochondrion FTSH protease 4 (ftsh4)","protein_coding" "Cpa|evm.model.tig00001628.1","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a protein with similarity to MAPKKKs. May function as a negative regulator of salt tolerance. protein tyrosine kinase family protein","protein_coding" "Cpa|evm.model.tig00001628.8","No alias","Cyanophora paradoxa ","35.2 not assigned.unknown Inositol-pentakisphosphate 2-kinase family protein","protein_coding" "Cpa|evm.model.tig00001718.3","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Encodes the Arabidopsis orthologue of the yeast and mammalian DNA ligase IV. Involved in the repair of DNA damage but, unlike in yeast, not required for T-DNA integration. Interacts with the Arabidopsis homologue of XRCC4. ATLIG4","protein_coding" "Cpa|evm.model.tig00001729.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020510.140","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020510.33","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1)","protein_coding" "Cpa|evm.model.tig00020510.36","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020510.42","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020510.50","No alias","Cyanophora paradoxa ","29.1.6 protein.aa activation.lysine-tRNA ligase lysyl-tRNA synthetase 1 (ATKRS-1)","protein_coding" "Cpa|evm.model.tig00020510.54","No alias","Cyanophora paradoxa ","29.1.6 protein.aa activation.lysine-tRNA ligase lysyl-tRNA synthetase 1 (ATKRS-1)","protein_coding" "Cpa|evm.model.tig00020510.55","No alias","Cyanophora paradoxa ","29.1.6 protein.aa activation.lysine-tRNA ligase lysyl-tRNA synthetase 1 (ATKRS-1)","protein_coding" "Cpa|evm.model.tig00020510.93","No alias","Cyanophora paradoxa ","12.4 N-metabolism.misc FMN-linked oxidoreductases superfamily protein","protein_coding" "Cpa|evm.model.tig00020515.16","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1)","protein_coding" "Cpa|evm.model.tig00020516.21","No alias","Cyanophora paradoxa ","13.1.4.1.1 amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1 (CSR1)","protein_coding" "Cpa|evm.model.tig00020528.14","No alias","Cyanophora paradoxa ","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cpa|evm.model.tig00020528.7","No alias","Cyanophora paradoxa ","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cpa|evm.model.tig00020537.11","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020537.26","No alias","Cyanophora paradoxa ","13.1.3.5.3 amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139. ABERRANT GROWTH AND DEATH 2 (AGD2)","protein_coding" "Cpa|evm.model.tig00020537.33","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020537.34","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020537.52","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cpa|evm.model.tig00020537.55","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors zinc ion bindingDNA bindinghelicasesATP bindingnucleic acid binding","protein_coding" "Cpa|evm.model.tig00020537.78","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020538.11","No alias","Cyanophora paradoxa ","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 24 (CPK24)","protein_coding" "Cpa|evm.model.tig00020538.45","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020538.67","No alias","Cyanophora paradoxa ","29.1.18 protein.aa activation.glutamine-tRNA ligase ovule abortion 9 (OVA9)","protein_coding" "Cpa|evm.model.tig00020538.68","No alias","Cyanophora paradoxa ","29.1.18 protein.aa activation.glutamine-tRNA ligase ovule abortion 9 (OVA9)","protein_coding" "Cpa|evm.model.tig00020539.45","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020539.8","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure EMBRYO DEFECTIVE 2780 (EMB2780)","protein_coding" "Cpa|evm.model.tig00020544.5","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020553.102","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020553.108","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI member of Myosin-like proteins myosin XI A (XIA)","protein_coding" "Cpa|evm.model.tig00020553.131","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020553.140","No alias","Cyanophora paradoxa ","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light. aspartate aminotransferase 2 (ASP2)","protein_coding" "Cpa|evm.model.tig00020553.145","No alias","Cyanophora paradoxa ","31.2 cell.division Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. TITAN8 (TTN8)","protein_coding" "Cpa|evm.model.tig00020553.153","No alias","Cyanophora paradoxa ","11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion. long-chain base1 (LCB1)","protein_coding" "Cpa|evm.model.tig00020553.163","No alias","Cyanophora paradoxa ","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "Cpa|evm.model.tig00020553.190","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim. multidrug resistance-associated protein 4 (MRP4)","protein_coding" "Cpa|evm.model.tig00020553.191","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 12 (MRP12)","protein_coding" "Cpa|evm.model.tig00020553.196","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase DEA(D/H)-box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00020553.198","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020553.279","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020553.37","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020553.56","No alias","Cyanophora paradoxa ","35.1 not assigned.no ontology Encodes a DCAF protein. Mutants are defective in lateral root development and suggest roles for DDB1≠Cul4ñmediated protein degradation in regulating auxin accumulation during lateral root primordium development and lateral root meristem emergence. LATERAL ROOT STIMULATOR 1 (LRS1)","protein_coding" "Cpa|evm.model.tig00020553.60","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020554.148","No alias","Cyanophora paradoxa ","31.1 cell.organisation PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2 both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 1 (POK1)","protein_coding" "Cpa|evm.model.tig00020554.154","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020554.155","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020554.158","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020554.16","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020554.162","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020554.164","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cpa|evm.model.tig00020554.169","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020554.34","No alias","Cyanophora paradoxa ","13.1.3.6.1.10 amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine. aspartate kinase-homoserine dehydrogenase ii (AK-HSDH II)","protein_coding" "Cpa|evm.model.tig00020554.45","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes. MAP kinase 6 (MPK6)","protein_coding" "Cpa|evm.model.tig00020554.68","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020554.71","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020554.77","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function. MINICHROMOSOME MAINTENANCE 2 (MCM2)","protein_coding" "Cpa|evm.model.tig00020556.3","No alias","Cyanophora paradoxa ","28.99 DNA.unspecified RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding" "Cpa|evm.model.tig00020556.31","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020556.80","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ATRX","protein_coding" "Cpa|evm.model.tig00020556.81","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling. VH1-interacting kinase (VIK)","protein_coding" "Cpa|evm.model.tig00020556.90","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cpa|evm.model.tig00020556.91","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020560.11","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification protein kinase family protein / WD-40 repeat family protein","protein_coding" "Cpa|evm.model.tig00020560.7","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification protein kinase family protein / WD-40 repeat family protein","protein_coding" "Cpa|evm.model.tig00020563.13","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020563.156","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020563.175","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase DEA(D/H)-box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00020563.179","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes catalytic subunit of serine/threonine protein phosphatase 2A. It can associate with phytochromes A and B in vitro. Mutant plants display an accelerated flowering phenotype. "flower-specific, phytochrome-associated protein phosphatase 3" (FYPP3)","protein_coding" "Cpa|evm.model.tig00020563.180","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020563.195","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Guanylate-binding family protein","protein_coding" "Cpa|evm.model.tig00020563.7","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition SALT OVERLY SENSITIVE 2 (SOS2)","protein_coding" "Cpa|evm.model.tig00020563.76","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020563.81","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020563.86","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020572.29","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020592.17","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type N-ethylmaleimide sensitive factor N-ethylmaleimide sensitive factor (NSF)","protein_coding" "Cpa|evm.model.tig00020592.34","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020592.4","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020601.1","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020603.19","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020603.43","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020604.24","No alias","Cyanophora paradoxa ","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases DEA(D/H)-box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00020610.106","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020610.121","No alias","Cyanophora paradoxa ","10.1.4 cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD) UDP-glucose 6-dehydrogenase family protein","protein_coding" "Cpa|evm.model.tig00020610.18","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. RAS 5 (RA-5)","protein_coding" "Cpa|evm.model.tig00020610.32","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00020610.46","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cpa|evm.model.tig00020610.57","No alias","Cyanophora paradoxa ","29.1.11 protein.aa activation.serine-tRNA ligase seryl-tRNA synthetase / serine--tRNA ligase","protein_coding" "Cpa|evm.model.tig00020610.70","No alias","Cyanophora paradoxa ","30.3 signalling.calcium encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. calcium-dependent protein kinase 1 (CDPK1)","protein_coding" "Cpa|evm.model.tig00020610.82","No alias","Cyanophora paradoxa ","28.2 DNA.repair Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization. MUTL-homologue 1 (MLH1)","protein_coding" "Cpa|evm.model.tig00020614.2","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020614.25","No alias","Cyanophora paradoxa ","29.1.10 protein.aa activation.methionine-tRNA ligase methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative","protein_coding" "Cpa|evm.model.tig00020614.28","No alias","Cyanophora paradoxa ","29.2.4 protein.synthesis.elongation elongation factor family protein","protein_coding" "Cpa|evm.model.tig00020614.39","No alias","Cyanophora paradoxa ","28.2 DNA.repair Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination. homolog of RAD54 (RAD54)","protein_coding" "Cpa|evm.model.tig00020614.45","No alias","Cyanophora paradoxa ","5.2 fermentation.PDC Thiamine pyrophosphate dependent pyruvate decarboxylase family protein","protein_coding" "Cpa|evm.model.tig00020614.46","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ATP binding cassette subfamily A4 (ABCA4)","protein_coding" "Cpa|evm.model.tig00020614.56","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020614.58","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes a member of the type XI myosin protein family involved in root hair elongation. myosin XI B (XIB)","protein_coding" "Cpa|evm.model.tig00020614.60","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020614.7","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro. MAP kinase kinase 6 (MKK6)","protein_coding" "Cpa|evm.model.tig00020616.46","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020629.132","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020629.149","No alias","Cyanophora paradoxa ","28.2 DNA.repair DNA mismatch repair protein MutS, type 2","protein_coding" "Cpa|evm.model.tig00020629.17","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020629.42","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases MAP kinase kinase7. Member of plant mitogen-activated protein kinase kinase group D. Negative regulator of polar auxin transport. Overexpression leads to activation of basal and systemic acquired resistance. MAP kinase kinase 7 (MKK7)","protein_coding" "Cpa|evm.model.tig00020629.43","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020629.98","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 3 (GCN3)","protein_coding" "Cpa|evm.model.tig00020660.20","No alias","Cyanophora paradoxa ","35.1 not assigned.no ontology FMN-linked oxidoreductases superfamily protein","protein_coding" "Cpa|evm.model.tig00020675.1","No alias","Cyanophora paradoxa ","29.1.10 protein.aa activation.methionine-tRNA ligase OVULE ABORTION 1 (OVA1)","protein_coding" "Cpa|evm.model.tig00020675.30","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure DNA helicase required for interference-sensitive meiotic crossover events. ROCK-N-ROLLERS (RCK)","protein_coding" "Cpa|evm.model.tig00020675.8","No alias","Cyanophora paradoxa ","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 1 (OPR1)","protein_coding" "Cpa|evm.model.tig00020684.10","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020684.12","No alias","Cyanophora paradoxa ","31.1 cell.organisation Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner. kinesin 4 (ATK4)","protein_coding" "Cpa|evm.model.tig00020684.2","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020684.32","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020684.38","No alias","Cyanophora paradoxa ","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020684.47","No alias","Cyanophora paradoxa ","35.1 not assigned.no ontology Galactose oxidase/kelch repeat superfamily protein","protein_coding" "Cpa|evm.model.tig00020684.64","No alias","Cyanophora paradoxa ","27.1 RNA.processing P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020684.9","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020685.16","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020685.19","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020703.19","No alias","Cyanophora paradoxa ","29.1.7 protein.aa activation.alanine-tRNA ligase Alanyl-tRNA synthetase (ALATS)","protein_coding" "Cpa|evm.model.tig00020703.23","No alias","Cyanophora paradoxa ","29.1.16 protein.aa activation.cysteine-tRNA ligase SYCO ARATH","protein_coding" "Cpa|evm.model.tig00020703.3","No alias","Cyanophora paradoxa ","35.2 not assigned.unknown GTP-binding protein, HflX","protein_coding" "Cpa|evm.model.tig00020704.42","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020704.54","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00020710.10","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. Members of this family are known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ARF1A1C","protein_coding" "Cpa|evm.model.tig00020710.32","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Half-molecule ABC transporter ATM2. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. ABC transporter of the mitochondrion 2 (ATM2)","protein_coding" "Cpa|evm.model.tig00020710.56","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors zinc ion bindingDNA bindinghelicasesATP bindingnucleic acid binding","protein_coding" "Cpa|evm.model.tig00020713.11","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase DEA(D/H)-box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00020713.13","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020723.108","No alias","Cyanophora paradoxa ","27.1 RNA.processing RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding" "Cpa|evm.model.tig00020723.34","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020723.5","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 11 (MRP11)","protein_coding" "Cpa|evm.model.tig00020725.10","No alias","Cyanophora paradoxa ","31.1 cell.organisation encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. FRAGILE FIBER 1 (FRA1)","protein_coding" "Cpa|evm.model.tig00020725.9","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020734.19","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020734.25","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase DEAD-box protein required for efficient group II intron splicing in mitochondria. putative mitochondrial RNA helicase 2 (PMH2)","protein_coding" "Cpa|evm.model.tig00020746.18","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure minichromosome maintenance 8 (MCM8)","protein_coding" "Cpa|evm.model.tig00020780.10","No alias","Cyanophora paradoxa ","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "Cpa|evm.model.tig00020780.16","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis. EMBRYO DEFECTIVE 269 (EMB269)","protein_coding" "Cpa|evm.model.tig00020780.18","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020780.28","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins embryo defective 2738 (emb2738)","protein_coding" "Cpa|evm.model.tig00020780.68","No alias","Cyanophora paradoxa ","30.1 signalling.in sugar and nutrient physiology encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1. SNF1 kinase homolog 11 (KIN11)","protein_coding" "Cpa|evm.model.tig00020800.22","No alias","Cyanophora paradoxa ","33.99 development.unspecified Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. INCOMPLETE ROOT HAIR ELONGATION (IRE)","protein_coding" "Cpa|evm.model.tig00020800.31","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2. STN8","protein_coding" "Cpa|evm.model.tig00020800.32","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Helicase protein with RING/U-box domain","protein_coding" "Cpa|evm.model.tig00020800.5","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020801.37","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020801.45","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020801.51","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020806.12","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020806.13","No alias","Cyanophora paradoxa ","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "Cpa|evm.model.tig00020812.7","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00020816.32","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes an novel myosin isoform. myosin-like protein XIF (XIF)","protein_coding" "Cpa|evm.model.tig00020816.75","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020816.76","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020825.19","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure chromatin remodeling 5 (CHR5)","protein_coding" "Cpa|evm.model.tig00020830.109","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Helicase protein with RING/U-box domain","protein_coding" "Cpa|evm.model.tig00020830.123","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification SNF1-related protein kinase 1.3 (SnRK1.3)","protein_coding" "Cpa|evm.model.tig00020830.28","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020830.40","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020830.66","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2. MAP kinase kinase 2 (MKK2)","protein_coding" "Cpa|evm.model.tig00020848.17","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. MAP kinase 4 (MPK4)","protein_coding" "Cpa|evm.model.tig00020848.20","No alias","Cyanophora paradoxa ","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases DEA(D/H)-box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00020848.27","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cpa|evm.model.tig00020848.31","No alias","Cyanophora paradoxa ","28.99 DNA.unspecified Encodes RECQ3, an ATP-dependent helicase. RecQl3","protein_coding" "Cpa|evm.model.tig00020848.32","No alias","Cyanophora paradoxa ","18 Co-factor and vitamine metabolism Pyridoxamine 5'-phosphate oxidase family protein","protein_coding" "Cpa|evm.model.tig00020848.37","No alias","Cyanophora paradoxa ","10.1.4 cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD) UDP-glucose 6-dehydrogenase family protein","protein_coding" "Cpa|evm.model.tig00020848.53","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020848.66","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors SNF2 domain-containing protein / helicase domain-containing protein","protein_coding" "Cpa|evm.model.tig00020848.72","No alias","Cyanophora paradoxa ","31.1 cell.organisation Microtubule motor kinesin PAKRP1/Kinesin-12A. Together with PAKRP1L/Kinesin-12B, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast. phragmoplast-associated kinesin-related protein 1 (PAKRP1)","protein_coding" "Cpa|evm.model.tig00020848.73","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020848.91","No alias","Cyanophora paradoxa ","1.3.13 PS.calvin cycle.rubisco interacting Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. rubisco activase (RCA)","protein_coding" "Cpa|evm.model.tig00020852.5","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020875.12","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins RAB GTPase homolog A5B (RABA5b)","protein_coding" "Cpa|evm.model.tig00020875.19","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020878.24","No alias","Cyanophora paradoxa ","12.4 N-metabolism.misc Aldolase-type TIM barrel family protein","protein_coding" "Cpa|evm.model.tig00020878.28","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020892.22","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 7 (PDR7)","protein_coding" "Cpa|evm.model.tig00020902.2","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 1 (PDR1)","protein_coding" "Cpa|evm.model.tig00020902.41","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication ROOT HAIRLESS 2 (RHL2)","protein_coding" "Cpa|evm.model.tig00020902.5","No alias","Cyanophora paradoxa ","17.5.1.1 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7)","protein_coding" "Cpa|evm.model.tig00020903.17","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020903.26","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00020903.27","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00020903.30","No alias","Cyanophora paradoxa ","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cpa|evm.model.tig00020903.32","No alias","Cyanophora paradoxa ","29.2.3 protein.synthesis.initiation Translation initiation factor 2, small GTP-binding protein","protein_coding" "Cpa|evm.model.tig00020903.59","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020904.113","No alias","Cyanophora paradoxa ","26.17 misc.dynamin Dynamin related protein 4C (DRP4C)","protein_coding" "Cpa|evm.model.tig00020904.145","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020904.22","No alias","Cyanophora paradoxa ","1.3.12 PS.calvin cycle.PRK phosphoribulokinase (PRK)","protein_coding" "Cpa|evm.model.tig00020904.29","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ATP-binding cassette 14 (ABCG14)","protein_coding" "Cpa|evm.model.tig00020904.57","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020904.65","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020904.69","No alias","Cyanophora paradoxa ","29.2.4 protein.synthesis.elongation Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS. MATERNAL EFFECT EMBRYO ARREST 5 (MEE5)","protein_coding" "Cpa|evm.model.tig00020904.85","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020904.92","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020909.20","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020909.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020909.37","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020911.44","No alias","Cyanophora paradoxa ","29.3.3 protein.targeting.chloroplast chloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids. CPFTSY","protein_coding" "Cpa|evm.model.tig00020911.67","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type Encodes a SKD1 (Suppressor of K+ Transport Growth Defect1) homolog. Localized to the cytoplasm and to multivesicular endosomes. Involved in multivesicular endosome function.","protein_coding" "Cpa|evm.model.tig00020912.101","No alias","Cyanophora paradoxa ","1.3.12 PS.calvin cycle.PRK phosphoribulokinase (PRK)","protein_coding" "Cpa|evm.model.tig00020912.22","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00020912.86","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ATRX","protein_coding" "Cpa|evm.model.tig00020912.93","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13. TOUSLED (TSL)","protein_coding" "Cpa|evm.model.tig00020918.5","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure MINICHROMOSOME MAINTENANCE 6 (MCM6)","protein_coding" "Cpa|evm.model.tig00020927.10","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cpa|evm.model.tig00020927.39","No alias","Cyanophora paradoxa ","35.1 not assigned.no ontology Encodes a (D)-2-hydroxyglutarate dehydrogenase. FAD-linked oxidases family protein","protein_coding" "Cpa|evm.model.tig00020930.14","No alias","Cyanophora paradoxa ","29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase class IIc family protein","protein_coding" "Cpa|evm.model.tig00020930.20","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020930.23","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020938.7","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020941.28","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 10 (MRP10)","protein_coding" "Cpa|evm.model.tig00020941.30","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020941.34","No alias","Cyanophora paradoxa ","7.1.3 OPP.oxidative PP.6-phosphogluconate dehydrogenase Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH).","protein_coding" "Cpa|evm.model.tig00020943.2","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020943.23","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins RAB GTPase homolog H1E (RABH1e)","protein_coding" "Cpa|evm.model.tig00020943.67","No alias","Cyanophora paradoxa ","26.10 misc.cytochrome P450 Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism. P450 reductase 1 (ATR1)","protein_coding" "Cpa|evm.model.tig00020943.69","No alias","Cyanophora paradoxa ","1.3.13 PS.calvin cycle.rubisco interacting Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. chaperonin-60alpha (CPN60A)","protein_coding" "Cpa|evm.model.tig00020943.85","No alias","Cyanophora paradoxa ","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00020943.88","No alias","Cyanophora paradoxa ","35.1 not assigned.no ontology initiator tRNA phosphoribosyl transferase family protein","protein_coding" "Cpa|evm.model.tig00020943.95","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 14 (PGP14)","protein_coding" "Cpa|evm.model.tig00020944.17","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020944.23","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020951.43","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI member of Myosin-like proteins myosin XI D (XID)","protein_coding" "Cpa|evm.model.tig00020952.7","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 2 (PGP2)","protein_coding" "Cpa|evm.model.tig00020960.24","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure chromatin remodeling 5 (CHR5)","protein_coding" "Cpa|evm.model.tig00020960.30","No alias","Cyanophora paradoxa ","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "Cpa|evm.model.tig00020960.32","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020960.58","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification casein kinase I-like 12 (ckl12)","protein_coding" "Cpa|evm.model.tig00020960.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020961.149","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020961.3","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2 (TAP2)","protein_coding" "Cpa|evm.model.tig00020961.39","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cpa|evm.model.tig00020961.67","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020961.68","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020961.97","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins RAB GTPase homolog A1E (RABA1e)","protein_coding" "Cpa|evm.model.tig00020964.24","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020964.9","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. non-intrinsic ABC protein 11 (NAP11)","protein_coding" "Cpa|evm.model.tig00020965.23","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00020995.14","No alias","Cyanophora paradoxa ","19.99 tetrapyrrole synthesis.unspecified Flavodoxin family protein","protein_coding" "Cpa|evm.model.tig00020996.22","No alias","Cyanophora paradoxa ","20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3 (CLPB3)","protein_coding" "Cpa|evm.model.tig00020999.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021012.34","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase DEAD-box protein abstrakt, putative","protein_coding" "Cpa|evm.model.tig00021012.40","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling factor18 (CHR18)","protein_coding" "Cpa|evm.model.tig00021014.10","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021015.16","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1)","protein_coding" "Cpa|evm.model.tig00021017.16","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021017.27","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021017.28","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021017.29","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure replication factor C1 (RFC1)","protein_coding" "Cpa|evm.model.tig00021017.32","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases Protein kinase superfamily protein","protein_coding" "Cpa|evm.model.tig00021017.40","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a CBL-interacting protein kinase with similarity to SOS2 CBL-interacting protein kinase 9 (CIPK9)","protein_coding" "Cpa|evm.model.tig00021017.8","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021035.28","No alias","Cyanophora paradoxa ","29.2.2 protein.synthesis.ribosome biogenesis Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress. The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues. protein-serine kinase 1 (PK1)","protein_coding" "Cpa|evm.model.tig00021036.17","No alias","Cyanophora paradoxa ","25.10 C1-metabolism.formate dehydrogenase Encodes a NAD-dependent formate dehydrogenase. formate dehydrogenase (FDH)","protein_coding" "Cpa|evm.model.tig00021036.59","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "Cpa|evm.model.tig00021037.30","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021038.67","No alias","Cyanophora paradoxa ","33.99 development.unspecified Transducin/WD40 repeat-like superfamily protein","protein_coding" "Cpa|evm.model.tig00021038.92","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases MAP3K epsilon protein kinase 2 is functionally redundant with MAP3Ke1. Required for pollen development but not essential. mitogen-activated protein kinase kinase kinase 6 (MAPKKK6)","protein_coding" "Cpa|evm.model.tig00021038.94","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins GTP bindingGTP binding","protein_coding" "Cpa|evm.model.tig00021043.14","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021046.12","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021068.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021070.106","No alias","Cyanophora paradoxa ","21.2.1.5 redox.ascorbate and glutathione.ascorbate.L-Galactono-1,4-lactone dehydrogenase L-Galactono-1,4-lactone dehydrogenase, catalyzes the final step of ascorbate biosynthesis "L-galactono-1,4-lactone dehydrogenase" (GLDH)","protein_coding" "Cpa|evm.model.tig00021070.109","No alias","Cyanophora paradoxa ","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene. oxophytodienoate-reductase 3 (OPR3)","protein_coding" "Cpa|evm.model.tig00021070.123","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021070.66","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021070.67","No alias","Cyanophora paradoxa ","31.1 cell.organisation encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. FRAGILE FIBER 1 (FRA1)","protein_coding" "Cpa|evm.model.tig00021073.24","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021073.36","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. non-intrinsic ABC protein 11 (NAP11)","protein_coding" "Cpa|evm.model.tig00021073.63","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021073.64","No alias","Cyanophora paradoxa ","18.4.5 Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK) Encodes a protein with pantothenate kinase activity. pantothenate kinase 2 (PANK2)","protein_coding" "Cpa|evm.model.tig00021098.29","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021105.35","No alias","Cyanophora paradoxa ","28.2 DNA.repair Helicase protein with RING/U-box domain","protein_coding" "Cpa|evm.model.tig00021108.13","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Class XI myosin gene XIC","protein_coding" "Cpa|evm.model.tig00021108.19","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI member of Myosin-like proteins myosin XI A (XIA)","protein_coding" "Cpa|evm.model.tig00021108.24","No alias","Cyanophora paradoxa ","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes an novel myosin isoform. myosin-like protein XIF (XIF)","protein_coding" "Cpa|evm.model.tig00021122.18","No alias","Cyanophora paradoxa ","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases RNA helicase 36 (RH36)","protein_coding" "Cpa|evm.model.tig00021123.14","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification yeast YAK1-related gene 1 (YAK1)","protein_coding" "Cpa|evm.model.tig00021126.10","No alias","Cyanophora paradoxa ","20.2.1 stress.abiotic.heat Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. heat shock protein 90.1 (HSP90.1)","protein_coding" "Cpa|evm.model.tig00021126.11","No alias","Cyanophora paradoxa ","20.2.1 stress.abiotic.heat encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. SHEPHERD (SHD)","protein_coding" "Cpa|evm.model.tig00021126.3","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Half-molecule ABC transporter ATM2. Arabidopsis thaliana has three ATM genes, namely ATM1, ATM2 and ATM3. Only ATM3 has an important function for plant growth. ABC transporter of the mitochondrion 2 (ATM2)","protein_coding" "Cpa|evm.model.tig00021127.11","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021127.111","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. non-intrinsic ABC protein 11 (NAP11)","protein_coding" "Cpa|evm.model.tig00021127.114","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021127.12","No alias","Cyanophora paradoxa ","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021127.121","No alias","Cyanophora paradoxa ","29.5.7 protein.degradation.metalloprotease VAR1","protein_coding" "Cpa|evm.model.tig00021127.122","No alias","Cyanophora paradoxa ","29.5.7 protein.degradation.metalloprotease VAR1","protein_coding" "Cpa|evm.model.tig00021127.125","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021127.129","No alias","Cyanophora paradoxa ","29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1E (ARFA1E)","protein_coding" "Cpa|evm.model.tig00021127.140","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Small GTP-binding protein","protein_coding" "Cpa|evm.model.tig00021127.182","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins ras-related small GTPase RAB GTPASE HOMOLOG B18 (RAB18)","protein_coding" "Cpa|evm.model.tig00021127.26","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021127.40","No alias","Cyanophora paradoxa ","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "Cpa|evm.model.tig00021127.61","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021127.70","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2 (TAP2)","protein_coding" "Cpa|evm.model.tig00021127.82","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import. peroxin 6 (PEX6)","protein_coding" "Cpa|evm.model.tig00021135.19","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins GTP-binding protein, HflX","protein_coding" "Cpa|evm.model.tig00021135.22","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021135.29","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules. mitogen-activated protein kinase kinase kinase 7 (MAPKKK7)","protein_coding" "Cpa|evm.model.tig00021135.32","No alias","Cyanophora paradoxa ","30.6 signalling.MAP kinases MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules. mitogen-activated protein kinase kinase kinase 7 (MAPKKK7)","protein_coding" "Cpa|evm.model.tig00021135.41","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021168.27","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021168.28","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021168.60","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling factor18 (CHR18)","protein_coding" "Cpa|evm.model.tig00021179.32","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "Cpa|evm.model.tig00021179.74","No alias","Cyanophora paradoxa ","29.5.7 protein.degradation.metalloprotease Encodes an FtsH protease that is localized to the chloroplast. AtFtsH6 is involved in the degradation of both Lhcb3 and Lhcb1 during senescence and high-light acclimation. FTSH protease 6 (FTSH6)","protein_coding" "Cpa|evm.model.tig00021179.84","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 1 (PDR1)","protein_coding" "Cpa|evm.model.tig00021234.13","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Phosphorylates serine, threonine, and tyrosine dual specificity kinase 1 (ADK1)","protein_coding" "Cpa|evm.model.tig00021234.5","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones. ECERIFERUM 5 (CER5)","protein_coding" "Cpa|evm.model.tig00021238.16","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021238.17","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase Encodes a predicted protein with 30% identity with MER3/RCK. U5 small nuclear ribonucleoprotein helicase","protein_coding" "Cpa|evm.model.tig00021244.30","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain. cyclin-dependent kinase E1 (CDKE1)","protein_coding" "Cpa|evm.model.tig00021244.31","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain. cyclin-dependent kinase E1 (CDKE1)","protein_coding" "Cpa|evm.model.tig00021246.10","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021246.11","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. helicasesATP-dependent helicasesnucleic acid bindingATP bindingDNA-directed DNA polymerasesDNA binding","protein_coding" "Cpa|evm.model.tig00021246.2","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021254.24","No alias","Cyanophora paradoxa ","29.3.4.99 protein.targeting.secretory pathway.unspecified Signal recognition particle, SRP54 subunit protein","protein_coding" "Cpa|evm.model.tig00021275.24","No alias","Cyanophora paradoxa ","29.5.7 protein.degradation.metalloprotease VAR1","protein_coding" "Cpa|evm.model.tig00021275.25","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature. chromatin-remodeling protein 11 (CHR11)","protein_coding" "Cpa|evm.model.tig00021290.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021293.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021312.23","No alias","Cyanophora paradoxa ","26.17 misc.dynamin Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. dynamin-related protein 3A (DRP3A)","protein_coding" "Cpa|evm.model.tig00021312.24","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021312.29","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021312.36","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 5 (PGP5)","protein_coding" "Cpa|evm.model.tig00021319.26","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021319.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021319.31","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021319.47","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021319.65","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021326.43","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "Cpa|evm.model.tig00021346.2","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata. embryo defective 1586 (EMB1586)","protein_coding" "Cpa|evm.model.tig00021348.36","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021348.49","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021348.64","No alias","Cyanophora paradoxa ","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "Cpa|evm.model.tig00021348.86","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Encodes a GTP-binding GTP-ase. Component of the chloroplast protein import machinery. Required for import of POR B into plastids. Toc33 phosphorylation may not play an important role in vivo. translocon at the outer envelope membrane of chloroplasts 33 (TOC33)","protein_coding" "Cpa|evm.model.tig00021348.92","No alias","Cyanophora paradoxa ","35.2 not assigned.unknown GTP binding","protein_coding" "Cpa|evm.model.tig00021350.16","No alias","Cyanophora paradoxa ","29.6 protein.folding Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1). T-complex protein 1 alpha subunit (TCP-1)","protein_coding" "Cpa|evm.model.tig00021350.23","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure DEAD/DEAH box RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00021350.25","No alias","Cyanophora paradoxa ","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "Cpa|evm.model.tig00021350.32","No alias","Cyanophora paradoxa ","17.5.1.1 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7)","protein_coding" "Cpa|evm.model.tig00021350.37","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021350.41","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021350.9","No alias","Cyanophora paradoxa ","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cpa|evm.model.tig00021352.17","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021352.21","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021352.37","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a CBL-interacting protein kinase with similarity to SOS2 CBL-interacting protein kinase 9 (CIPK9)","protein_coding" "Cpa|evm.model.tig00021352.40","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure MINICHROMOSOME MAINTENANCE 3 (MCM3)","protein_coding" "Cpa|evm.model.tig00021352.57","No alias","Cyanophora paradoxa ","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "Cpa|evm.model.tig00021352.60","No alias","Cyanophora paradoxa ","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "Cpa|evm.model.tig00021352.9","No alias","Cyanophora paradoxa ","23.3.2.2 nucleotide metabolism.salvage.nucleoside kinases.uridine kinase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021357.12","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure embryo defective 1968 (EMB1968)","protein_coding" "Cpa|evm.model.tig00021357.27","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021357.28","No alias","Cyanophora paradoxa ","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus protein serine/threonine kinasesATP bindingcatalytics","protein_coding" "Cpa|evm.model.tig00021357.29","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Protein kinase family protein with ARM repeat domain","protein_coding" "Cpa|evm.model.tig00021357.50","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure minichromosome maintenance 9 (MCM9)","protein_coding" "Cpa|evm.model.tig00021357.51","No alias","Cyanophora paradoxa ","28.99 DNA.unspecified DEAD/DEAH box helicase, putative","protein_coding" "Cpa|evm.model.tig00021365.15","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021365.4","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021365.5","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021373.8","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification high leaf temperature 1 (HT1)","protein_coding" "Cpa|evm.model.tig00021374.41","No alias","Cyanophora paradoxa ","31.1 cell.organisation Encodes a kinesin-like protein that binds microtubules in an ATP-dependent manner. kinesin 4 (ATK4)","protein_coding" "Cpa|evm.model.tig00021428.19","No alias","Cyanophora paradoxa ","29.3.5 protein.targeting.peroxisomes an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals. peroxisome 1 (PEX1)","protein_coding" "Cpa|evm.model.tig00021428.9","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type encodes an FtsH protease that is localized to the mitochondrion FTSH protease 3 (ftsh3)","protein_coding" "Cpa|evm.model.tig00021432.35","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins Nucleolar GTP-binding protein","protein_coding" "Cpa|evm.model.tig00021432.55","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues. topoisomerase II (TOPII)","protein_coding" "Cpa|evm.model.tig00021432.7","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021433.1","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues. topoisomerase II (TOPII)","protein_coding" "Cpa|evm.model.tig00021433.11","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021433.2","No alias","Cyanophora paradoxa ","28.1 DNA.synthesis/chromatin structure Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues. topoisomerase II (TOPII)","protein_coding" "Cpa|evm.model.tig00021433.21","No alias","Cyanophora paradoxa ","26.10 misc.cytochrome P450 Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway. P450 reductase 2 (ATR2)","protein_coding" "Cpa|evm.model.tig00021433.27","No alias","Cyanophora paradoxa ","29.2.3 protein.synthesis.initiation protein synthesis initiation factor eIF2 gamma eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA)","protein_coding" "Cpa|evm.model.tig00021433.40","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021434.18","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 14 (PGP14)","protein_coding" "Cpa|evm.model.tig00021434.23","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021435.4","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021435.45","No alias","Cyanophora paradoxa ","29.2.2 protein.synthesis.ribosome biogenesis Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. Arabidopsis thaliana protein kinase 19 (ATPK19)","protein_coding" "Cpa|evm.model.tig00021435.55","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021439.10","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021462.19","No alias","Cyanophora paradoxa ","31.1 cell.organisation Integrin-linked protein kinase family","protein_coding" "Cpa|evm.model.tig00021463.11","No alias","Cyanophora paradoxa ","31.2 cell.division Encodes a cell division cycle protein, a member of AAA-type ATPases gene family. Expressed throughout the plant in regions of cell division. Within the cell, sub-cellular localization varies depending on the stage of the cell cycle.Mutants in which the expression of CDC48A is altered show defects in cytokinesis, cell expansion and cell differentiation. cell division cycle 48 (CDC48)","protein_coding" "Cpa|evm.model.tig00021463.3","No alias","Cyanophora paradoxa ","29.1.40 protein.aa activation.bifunctional aminoacyl-tRNA synthetase OVULE ABORTION 6 (OVA6)","protein_coding" "Cpa|evm.model.tig00021463.8","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling 8 (CHR8)","protein_coding" "Cpa|evm.model.tig00021464.16","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021464.39","No alias","Cyanophora paradoxa ","29.2.4 protein.synthesis.elongation encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1)","protein_coding" "Cpa|evm.model.tig00021464.5","No alias","Cyanophora paradoxa ","7.1.3 OPP.oxidative PP.6-phosphogluconate dehydrogenase 6-phosphogluconate dehydrogenase family protein","protein_coding" "Cpa|evm.model.tig00021464.53","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins RAB GTPase homolog H1E (RABH1e)","protein_coding" "Cpa|evm.model.tig00021464.55","No alias","Cyanophora paradoxa ","29.3.3 protein.targeting.chloroplast mutant has Yellow first leaves Chloroplast Signal Recognition Particle Subunit chloroplast signal recognition particle 54 kDa subunit (CPSRP54)","protein_coding" "Cpa|evm.model.tig00021464.6","No alias","Cyanophora paradoxa ","7.1.1 OPP.oxidative PP.G6PD Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1 (G6PD1)","protein_coding" "Cpa|evm.model.tig00021489.1","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021489.11","No alias","Cyanophora paradoxa ","29.2.2 protein.synthesis.ribosome biogenesis Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress. The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues. protein-serine kinase 1 (PK1)","protein_coding" "Cpa|evm.model.tig00021489.27","No alias","Cyanophora paradoxa ","21.2.2 redox.ascorbate and glutathione.glutathione Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol. glutathione synthetase 2 (GSH2)","protein_coding" "Cpa|evm.model.tig00021489.28","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021491.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021493.15","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021493.29","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes 3-phosphoinositide-dependent protein kinase that","protein_coding" "Cpa|evm.model.tig00021494.1","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cpa|evm.model.tig00021494.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021517.10","No alias","Cyanophora paradoxa ","27.2 RNA.transcription member of RLI subfamily RNAse l inhibitor protein 2 (RLI2)","protein_coding" "Cpa|evm.model.tig00021517.15","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021518.27","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021521.19","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021525.3","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021535.18","No alias","Cyanophora paradoxa ","29.5.11.20 protein.degradation.ubiquitin.proteasom P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021537.23","No alias","Cyanophora paradoxa ","29.1.3 protein.aa activation.threonine-tRNA ligase Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion. Threonyl-tRNA synthetase","protein_coding" "Cpa|evm.model.tig00021537.61","No alias","Cyanophora paradoxa ","33.99 development.unspecified Encodes a [FeFe]-hydrogenase-like protein named Gollum (for Growth in different Oxygen LeveLs inflUences Morphogenesis). Heterologous expression of Gollum in E. coli indicates that it probably","protein_coding" "Cpa|evm.model.tig00021537.63","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021537.64","No alias","Cyanophora paradoxa ","26.10 misc.cytochrome P450 Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism. P450 reductase 1 (ATR1)","protein_coding" "Cpa|evm.model.tig00021537.65","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1)","protein_coding" "Cpa|evm.model.tig00021537.72","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cpa|evm.model.tig00021579.12","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021579.13","No alias","Cyanophora paradoxa ","25.2 C1-metabolism.formate-tetrahydrofolate ligase 10-formyltetrahydrofolate synthetase (THFS) mRNA, complete","protein_coding" "Cpa|evm.model.tig00021579.18","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021579.20","No alias","Cyanophora paradoxa ","7.1.1 OPP.oxidative PP.G6PD Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1 (G6PD1)","protein_coding" "Cpa|evm.model.tig00021580.3","No alias","Cyanophora paradoxa ","30.5 signalling.G-proteins P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021582.19","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification CBL-interacting protein kinase CBL-interacting protein kinase 4 (CIPK4)","protein_coding" "Cpa|evm.model.tig00021582.20","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021582.39","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cpa|evm.model.tig00021583.8","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021589.16","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.","protein_coding" "Cpa|evm.model.tig00021589.18","No alias","Cyanophora paradoxa ","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 25 (CPK25)","protein_coding" "Cpa|evm.model.tig00021590.1","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021590.18","No alias","Cyanophora paradoxa ","13.1.2.3.4 amino acid metabolism.synthesis.glutamate family.arginine.acetylornithine aminotransferase Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600 WIN2: AT4G31750 WIN3: AT5G13320). HOPW1-1-interacting 1 (WIN1)","protein_coding" "Cpa|evm.model.tig00021590.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021591.13","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021591.16","No alias","Cyanophora paradoxa ","11 lipid metabolism tetraacyldisaccharide 4'-kinase family protein","protein_coding" "Cpa|evm.model.tig00021591.19","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021603.2","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification Encodes a putative serine/threonine kinase It is expressed specifically in pollen and appears to function redundantly with AGC1.7 to regulate polarized growth of pollen tubes. AGC kinase 1.5 (AGC1.5)","protein_coding" "Cpa|evm.model.tig00021603.5","No alias","Cyanophora paradoxa ","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cpa|evm.model.tig00021612.36","No alias","Cyanophora paradoxa ","29.4.1 protein.postranslational modification.kinase encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase SNF1 kinase homolog 10 (KIN10)","protein_coding" "Cpa|evm.model.tig00021612.43","No alias","Cyanophora paradoxa ","18.6.2 Co-factor and vitamine metabolism.biotin.Diaminopelargonic acid aminotransferase and dethiobiotin synthetase Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase. biotin auxotroph 1 (BIO1)","protein_coding" "Cpa|evm.model.tig00021612.5","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021612.58","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021616.10","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021617.22","No alias","Cyanophora paradoxa ","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cpa|evm.model.tig00021621.7","No alias","Cyanophora paradoxa ","26.10 misc.cytochrome P450 Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway. P450 reductase 2 (ATR2)","protein_coding" "Cpa|evm.model.tig00021623.13","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021680.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021741.16","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021745.38","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00021759.1","No alias","Cyanophora paradoxa ","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 9 (PGP9)","protein_coding" "Cpa|evm.model.tig00021760.3","No alias","Cyanophora paradoxa ","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ATRX","protein_coding" "Cpa|evm.model.tig00021795.6","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00022075.25","No alias","Cyanophora paradoxa ","27.1.2 RNA.processing.RNA helicase RNA helicase family protein","protein_coding" "Cpa|evm.model.tig00022075.31","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00022075.32","No alias","Cyanophora paradoxa ","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases hydrolases, acting on acid anhydrides, in phosphorus-containing anhydridesATP-dependent helicasesnucleic acid bindingATP bindingRNA bindinghelicases","protein_coding" "Cpa|evm.model.tig00022075.42","No alias","Cyanophora paradoxa ","29.5.7 protein.degradation.metalloprotease encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes. FTSH protease 1 (FTSH1)","protein_coding" "Cpa|evm.model.tig00022075.46","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00022075.67","No alias","Cyanophora paradoxa ","29.1.4 protein.aa activation.leucine-tRNA ligase ATP bindingleucine-tRNA ligasesaminoacyl-tRNA ligasesnucleotide bindingATP bindingaminoacyl-tRNA ligases","protein_coding" "Cpa|evm.model.tig00022075.68","No alias","Cyanophora paradoxa ","29.1.4 protein.aa activation.leucine-tRNA ligase ATP bindingleucine-tRNA ligasesaminoacyl-tRNA ligasesnucleotide bindingATP bindingaminoacyl-tRNA ligases","protein_coding" "Cpa|evm.model.tig00022075.7","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00022075.88","No alias","Cyanophora paradoxa ","No description available","protein_coding" "Cpa|evm.model.tig00022080.6","No alias","Cyanophora paradoxa ","35.2 not assigned.unknown Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts. NO ASSOCIATED 1 (NOA1)","protein_coding" "Cre01.g001350","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "Cre01.g001678","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre01.g001800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g002550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g003463","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7. MUTS homolog 2 (MSH2)","protein_coding" "Cre01.g003524","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 17 (CPK17)","protein_coding" "Cre01.g005550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g006150","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants. SNOWY COTYLEDON 1 (SCO1)","protein_coding" "Cre01.g008150","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein phosphatase 2C family protein","protein_coding" "Cre01.g008550","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre01.g009250","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues. topoisomerase II (TOPII)","protein_coding" "Cre01.g010000","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes. MAP kinase 6 (MPK6)","protein_coding" "Cre01.g010150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g012950","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g014600","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. casein kinase 1-like protein 2 (CKL2)","protein_coding" "Cre01.g014800","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair DNA mismatch repair protein MutS, type 2","protein_coding" "Cre01.g015250","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure EMBRYO DEFECTIVE 2780 (EMB2780)","protein_coding" "Cre01.g016570","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules. mitogen-activated protein kinase kinase kinase 7 (MAPKKK7)","protein_coding" "Cre01.g019100","No alias","Chlamydomonas reinhardtii","13.1.5.1.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase encodes a 3-Phosphoglycerate dehydrogenase D-3-phosphoglycerate dehydrogenase","protein_coding" "Cre01.g019850","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type encodes an FtsH protease that is localized to the mitochondrion FTSH protease 3 (ftsh3)","protein_coding" "Cre01.g021600","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase RNA HELICASE DRH1 DEAD box RNA helicase 1 (DRH1)","protein_coding" "Cre01.g021850","No alias","Chlamydomonas reinhardtii","28.99 DNA.unspecified DEAD/DEAH box RNA helicase family protein","protein_coding" "Cre01.g022000","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre01.g022350","No alias","Chlamydomonas reinhardtii","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre01.g022500","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g023150","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin. MINICHROMOSOME MAINTENANCE 5 (MCM5)","protein_coding" "Cre01.g023787","No alias","Chlamydomonas reinhardtii","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus member of GCN subfamily GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1)","protein_coding" "Cre01.g024251","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing. ENHANCED SILENCING PHENOTYPE 3 (ESP3)","protein_coding" "Cre01.g026550","No alias","Chlamydomonas reinhardtii","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cre01.g026900","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g027150","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage. EMBRYO DEFECTIVE 25 (EMB25)","protein_coding" "Cre01.g028200","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase DEA(D/H)-box RNA helicase family protein","protein_coding" "Cre01.g028423","No alias","Chlamydomonas reinhardtii","16.4.1 secondary metabolism.N misc.alkaloid-like Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "Cre01.g029500","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g029850","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "Cre01.g029900","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g031300","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 25 (CPK25)","protein_coding" "Cre01.g032700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g033832","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase. RH39 (RH39)","protein_coding" "Cre01.g034050","No alias","Chlamydomonas reinhardtii","16.2 secondary metabolism.phenylpropanoids Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "Cre01.g034900","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification SNF1-related protein kinase 1.3 (SnRK1.3)","protein_coding" "Cre01.g034950","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 4 (GCN4)","protein_coding" "Cre01.g036000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g036050","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization. MUTL-homologue 1 (MLH1)","protein_coding" "Cre01.g036250","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. calmodulin-domain protein kinase cdpk isoform 2 (CPK2)","protein_coding" "Cre01.g036650","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre01.g036700","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre01.g036800","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre01.g036900","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre01.g037100","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification SNF1-related protein kinase 1.3 (SnRK1.3)","protein_coding" "Cre01.g038000","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification GCN2","protein_coding" "Cre01.g038151","No alias","Chlamydomonas reinhardtii","31.2 cell.division cell division cycle protein 48-related / CDC48-related","protein_coding" "Cre01.g038250","No alias","Chlamydomonas reinhardtii","13.2.7 amino acid metabolism.degradation.histidine embryo defective 1075 (emb1075)","protein_coding" "Cre01.g040050","No alias","Chlamydomonas reinhardtii","18.2.1 Co-factor and vitamine metabolism.thiamine.thiamine diphosphokinase Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine. thiamin pyrophosphokinase1 (TPK1)","protein_coding" "Cre01.g040150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g040200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g040350","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair DNA mismatch repair protein MutS, type 2","protein_coding" "Cre01.g040950","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g045600","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g047550","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant. RAB6A","protein_coding" "Cre01.g047850","No alias","Chlamydomonas reinhardtii","16.2 secondary metabolism.phenylpropanoids Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "Cre01.g047950","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins RAB GTPase homolog A3 (RABA3)","protein_coding" "Cre01.g048650","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 17 (CPK17)","protein_coding" "Cre01.g049650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g050150","No alias","Chlamydomonas reinhardtii","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase FMN-linked oxidoreductases superfamily protein","protein_coding" "Cre01.g050950","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g051800","No alias","Chlamydomonas reinhardtii","13.1.6.2 amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "Cre01.g052800","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre01.g052850","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre01.g053000","No alias","Chlamydomonas reinhardtii","11.5.2 lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+) NAD-dependent glycerol-3-phosphate dehydrogenase family protein","protein_coding" "Cre01.g054750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g055457","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre01.g055600","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre01.g058886","No alias","Chlamydomonas reinhardtii","34.5 transport.ammonium P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre01.g064362","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre01.g064727","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre02.g073750","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation Encodes a kinesin-like protein. ZCF125","protein_coding" "Cre02.g074650","No alias","Chlamydomonas reinhardtii","11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport. acyl-CoA binding protein 4 (ACBP4)","protein_coding" "Cre02.g074850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g075350","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g075850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g075900","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g076000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g076250","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants. SNOWY COTYLEDON 1 (SCO1)","protein_coding" "Cre02.g076350","No alias","Chlamydomonas reinhardtii","34.1.1.1 transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit B ATPase, V1 complex, subunit B protein","protein_coding" "Cre02.g076900","No alias","Chlamydomonas reinhardtii","29.2.2 protein.synthesis.ribosome biogenesis Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. Arabidopsis thaliana protein kinase 19 (ATPK19)","protein_coding" "Cre02.g077350","No alias","Chlamydomonas reinhardtii","13.1.7.9 amino acid metabolism.synthesis.histidine.histidinol dehydrogenase Encodes histidinol dehydrogenase. Up-regulated in response to UV-B. histidinol dehydrogenase (HDH)","protein_coding" "Cre02.g077951","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ABC2 homolog 6 (ATH6)","protein_coding" "Cre02.g078100","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g078966","No alias","Chlamydomonas reinhardtii","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the chloroplast FTSH protease 7 (ftsh7)","protein_coding" "Cre02.g079300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g079550","No alias","Chlamydomonas reinhardtii","26.17 misc.dynamin A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.","protein_coding" "Cre02.g079600","No alias","Chlamydomonas reinhardtii","29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase class IIc family protein","protein_coding" "Cre02.g080650","No alias","Chlamydomonas reinhardtii","20.2.1 stress.abiotic.heat encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. SHEPHERD (SHD)","protein_coding" "Cre02.g082200","No alias","Chlamydomonas reinhardtii","13.1.3.6.1.4 amino acid metabolism.synthesis.aspartate family.misc.homoserine.homoserine kinase Encodes a homoserine kinase (HSK) which produces O-phospho-L-homoserine (HserP), a compound at the branching point of methionine and threonine biosynthesis. HSK is found in the stromal fraction of chloroplasts. Mutants are susceptible to downy mildew fungus Hyaloperonospora parasitica.","protein_coding" "Cre02.g082250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g082550","No alias","Chlamydomonas reinhardtii","17.1.1.1.1 hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. ABA DEFICIENT 1 (ABA1)","protein_coding" "Cre02.g082825","No alias","Chlamydomonas reinhardtii","29.1.11 protein.aa activation.serine-tRNA ligase Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. Seryl-tRNA synthetase (SRS)","protein_coding" "Cre02.g082877","No alias","Chlamydomonas reinhardtii","29.1.11 protein.aa activation.serine-tRNA ligase Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. Seryl-tRNA synthetase (SRS)","protein_coding" "Cre02.g083354","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2 (TAP2)","protein_coding" "Cre02.g083450","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g083550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g083600","No alias","Chlamydomonas reinhardtii","35.2 not assigned.unknown GTP binding","protein_coding" "Cre02.g084800","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication ROOT HAIRLESS 2 (RHL2)","protein_coding" "Cre02.g086650","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2) structural maintenance of chromosomes 2 (SMC2)","protein_coding" "Cre02.g087300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g087600","No alias","Chlamydomonas reinhardtii","28.99 DNA.unspecified ETL1","protein_coding" "Cre02.g087750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g087800","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification protein kinase, similar to mammal mixed-lineage kinase and Raf protein kinase ATMRK1","protein_coding" "Cre02.g087850","No alias","Chlamydomonas reinhardtii","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase family protein","protein_coding" "Cre02.g087900","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre02.g089608","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure RAD3-like DNA-binding helicase protein","protein_coding" "Cre02.g090500","No alias","Chlamydomonas reinhardtii","29.2.3 protein.synthesis.initiation DEA(D/H)-box RNA helicase family protein","protein_coding" "Cre02.g090850","No alias","Chlamydomonas reinhardtii","20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3 (CLPB3)","protein_coding" "Cre02.g091400","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g092500","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes. LOW-LEVEL BETA-AMYLASE 1 (LBA1)","protein_coding" "Cre02.g092900","No alias","Chlamydomonas reinhardtii","23.1.2.31 nucleotide metabolism.synthesis.purine.GMP synthetase GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative","protein_coding" "Cre02.g094650","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology GTP-binding protein Obg/CgtA","protein_coding" "Cre02.g095099","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g095100","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g095141","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g095151","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cre02.g095200","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 4 (GCN4)","protein_coding" "Cre02.g095250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g095300","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre02.g095550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g095650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g095750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g096250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g097800","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cre02.g097900","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g098450","No alias","Chlamydomonas reinhardtii","29.2.3 protein.synthesis.initiation protein synthesis initiation factor eIF2 gamma eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA)","protein_coding" "Cre02.g102000","No alias","Chlamydomonas reinhardtii","29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins. ADP-ribosylation factor C1 (ARFC1)","protein_coding" "Cre02.g103250","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cre02.g104201","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre02.g104900","No alias","Chlamydomonas reinhardtii","35.2 not assigned.unknown GTP binding","protein_coding" "Cre02.g107000","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre02.g107350","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g107600","No alias","Chlamydomonas reinhardtii","10.1.30.3 cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP. glucuronokinase G (GLCAK)","protein_coding" "Cre02.g107800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g108700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g108750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g111014","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre02.g111500","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre02.g111550","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre02.g112333","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g112500","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g112550","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 12 (NAP12)","protein_coding" "Cre02.g112850","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "Cre02.g113600","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g114200","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. casein kinase 1-like protein 2 (CKL2)","protein_coding" "Cre02.g114750","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 34 (CPK34)","protein_coding" "Cre02.g116700","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre02.g117150","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre02.g117500","No alias","Chlamydomonas reinhardtii","2.2.1.4 major CHO metabolism.degradation.sucrose.hexokinase Encodes a putative hexokinase. hexokinase 3 (HXK3)","protein_coding" "Cre02.g117900","No alias","Chlamydomonas reinhardtii","27.1 RNA.processing RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding" "Cre02.g118300","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase DEAD/DEAH box RNA helicase PRH75 PRH75","protein_coding" "Cre02.g118850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g120250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g141400","No alias","Chlamydomonas reinhardtii","6.4 gluconeogenesis / glyoxylate cycle.PEPCK Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent). phosphoenolpyruvate carboxykinase 1 (PCK1)","protein_coding" "Cre02.g141606","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g141706","No alias","Chlamydomonas reinhardtii","35.2 not assigned.unknown RNA bindingGTP binding","protein_coding" "Cre02.g141800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g141826","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g141886","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g141926","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g141966","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification protein kinase, similar to mammal mixed-lineage kinase and Raf protein kinase ATMRK1","protein_coding" "Cre02.g142687","No alias","Chlamydomonas reinhardtii","29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1E (ARFA1E)","protein_coding" "Cre02.g143800","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure switch 2 (SWI2)","protein_coding" "Cre02.g144350","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins RAB GTPase homolog B1A (RABB1a)","protein_coding" "Cre02.g145050","No alias","Chlamydomonas reinhardtii","16.1.1.4 secondary metabolism.isoprenoids.non-mevalonate pathway.CMK Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase. 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase (CDPMEK)","protein_coding" "Cre02.g145500","No alias","Chlamydomonas reinhardtii","29.4.1 protein.postranslational modification.kinase Mitogen activated protein kinase kinase kinase-related","protein_coding" "Cre02.g146500","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification yeast YAK1-related gene 1 (YAK1)","protein_coding" "Cre02.g146851","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g147302","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre02.g147850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g143887","No alias","Chlamydomonas reinhardtii","29.1.19 protein.aa activation.arginine-tRNA ligase embryo defective 1027 (emb1027)","protein_coding" "Cre03.g144011","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre03.g144264","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1)","protein_coding" "Cre03.g144464","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre03.g144484","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus recombinant protein is fully active and induced by Ca2+ calmodulin-like domain protein kinase 9 (CDPK9)","protein_coding" "Cre03.g144627","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g144967","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "Cre03.g144987","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g145107","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation Di-glucose binding protein with Kinesin motor domain","protein_coding" "Cre03.g145127","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology Galactose oxidase/kelch repeat superfamily protein","protein_coding" "Cre03.g145727","No alias","Chlamydomonas reinhardtii","29.1.1 protein.aa activation.tyrosine-tRNA ligase Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial","protein_coding" "Cre03.g146507","No alias","Chlamydomonas reinhardtii","11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion. long-chain base1 (LCB1)","protein_coding" "Cre03.g148850","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases member of MEKK subfamily mitogen-activated protein kinase kinase kinase 5 (MAPKKK5)","protein_coding" "Cre03.g148900","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "Cre03.g151300","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre03.g151400","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ATP-binding cassette A1 (ABCA1)","protein_coding" "Cre03.g152000","No alias","Chlamydomonas reinhardtii","17.1.1 hormone metabolism.abscisic acid.synthesis-degradation Encodes molybdenum cofactor sulfurase. Involved in Moco biosynthesis. Involved in the conversion of ABA-aldehyde to ABA, the last step of abscisic acid (ABA) biosynthesis. sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.N terminal domain is similar to bacterial NifS suggesting a common mechanism for sulphur mobilization and transfer. Also involved in protein import into chloroplasts.","protein_coding" "Cre03.g153150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g154250","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification protein kinase, similar to mammal mixed-lineage kinase and Raf protein kinase ATMRK1","protein_coding" "Cre03.g155051","No alias","Chlamydomonas reinhardtii","11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids dihydrosphingosine phosphate lyase (DPL1)","protein_coding" "Cre03.g156150","No alias","Chlamydomonas reinhardtii","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases DEA(D/H)-box RNA helicase family protein","protein_coding" "Cre03.g156650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g156750","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification TCP-1/cpn60 chaperonin family protein","protein_coding" "Cre03.g157200","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre03.g157250","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre03.g158000","No alias","Chlamydomonas reinhardtii","19.3 tetrapyrrole synthesis.GSA glutamate-1-semialdehyde 2,1-aminomutase 2 (GSA2)","protein_coding" "Cre03.g158550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g158750","No alias","Chlamydomonas reinhardtii","27.1 RNA.processing P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre03.g159016","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Protein kinase superfamily protein","protein_coding" "Cre03.g159650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g161800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g162333","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g162701","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Encodes a SWI2/SNF2-like protein in the SNF2 subclass. Homozygous plants with null mutations exhibit premature termination of the meristem and carpelloid structures from the inflorescence meristem. Co-activator of floral homeotic gene expression. Acts with LFY to regulate shoot apical meristem identity. Required for meristem maintenance. Regulates flowering under a non-inductive photoperiod. It promotes the expression of CUC2 during cotyledon boundary formation. Affects reproductive shoot apical meristem function by regulating the expression of WUS. In CHiP experiments SYD binds to WUS promoter. Present as two forms in the nucleus, full-length and truncated, with the latter apparently lacking the C-terminal domain. The ratio of the two forms differs in juvenile and in adult tissues. The C-terminal domain is not required for activity. SPLAYED (SYD)","protein_coding" "Cre03.g164050","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2 both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 1 (POK1)","protein_coding" "Cre03.g164150","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily ATNAP13","protein_coding" "Cre03.g164250","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre03.g164900","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre03.g165000","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Small GTP-binding protein","protein_coding" "Cre03.g165700","No alias","Chlamydomonas reinhardtii","5.2 fermentation.PDC pyruvate decarboxylase-2 pyruvate decarboxylase-2 (PDC2)","protein_coding" "Cre03.g166650","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA helicase family protein","protein_coding" "Cre03.g167150","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "Cre03.g168150","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling. VH1-interacting kinase (VIK)","protein_coding" "Cre03.g168450","No alias","Chlamydomonas reinhardtii","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cre03.g168800","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. FRAGILE FIBER 1 (FRA1)","protein_coding" "Cre03.g168900","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g169100","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Encodes 3-phosphoinositide-dependent protein kinase that","protein_coding" "Cre03.g169300","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cre03.g169500","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification ATMPK8, ATMPK8","protein_coding" "Cre03.g169850","No alias","Chlamydomonas reinhardtii","29.1.16 protein.aa activation.cysteine-tRNA ligase SYCO ARATH","protein_coding" "Cre03.g172250","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins GTP bindingGTP binding","protein_coding" "Cre03.g173400","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Guanylate-binding family protein","protein_coding" "Cre03.g173700","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre03.g174000","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Small GTP-binding protein","protein_coding" "Cre03.g174050","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cre03.g175600","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g176800","No alias","Chlamydomonas reinhardtii","25.8 C1-metabolism.tetrahydrofolate synthase Encodes a dihydrofolate synthetase based on yeast complementation experiments. This protein is involved in folate biosynthesis. GLOBULAR ARREST1 (GLA1)","protein_coding" "Cre03.g177600","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology D-arabinono-1,4-lactone oxidase family protein","protein_coding" "Cre03.g178200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g178650","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure MINICHROMOSOME MAINTENANCE 6 (MCM6)","protein_coding" "Cre03.g178950","No alias","Chlamydomonas reinhardtii","28.99 DNA.unspecified RECQ helicase l1 (RECQI1)","protein_coding" "Cre03.g179300","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure chromatin remodeling 5 (CHR5)","protein_coding" "Cre03.g180300","No alias","Chlamydomonas reinhardtii","26.10 misc.cytochrome P450 Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway. P450 reductase 2 (ATR2)","protein_coding" "Cre03.g181700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g182800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g183350","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling 24 (CHR24)","protein_coding" "Cre03.g184450","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g185300","No alias","Chlamydomonas reinhardtii","10.1.30.2 ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase Similar to galactokinase. arabinose kinase (ARA1)","protein_coding" "Cre03.g187700","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure nucleic acid bindingATP-dependent helicasesATP bindinghelicasesATP-dependent helicases","protein_coding" "Cre03.g188550","No alias","Chlamydomonas reinhardtii","29.2.2.2.1 protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre03.g188750","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase DEAD-box protein required for efficient group II intron splicing in mitochondria. putative mitochondrial RNA helicase 2 (PMH2)","protein_coding" "Cre03.g189000","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination. homolog of RAD54 (RAD54)","protein_coding" "Cre03.g189250","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Encodes a putative GTP-binding protein. Associates with organelles on a pathway from the Golgi to the plasma membrane in interphase. In dividing cells acts at the cell plate. RAB GTPase 11C (RAB11c)","protein_coding" "Cre03.g189400","No alias","Chlamydomonas reinhardtii","29.1.11 protein.aa activation.serine-tRNA ligase seryl-tRNA synthetase / serine--tRNA ligase","protein_coding" "Cre03.g190050","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g191050","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. RAN GTPase 3 (RAN3)","protein_coding" "Cre03.g191350","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g192600","No alias","Chlamydomonas reinhardtii","23.3.2.3 nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase Thymidine kinase","protein_coding" "Cre03.g193800","No alias","Chlamydomonas reinhardtii","29.1.22 protein.aa activation.asparagine-tRNA ligase Encodes a putative cytosolic asparaginyl-tRNA synthetase. SYNC1","protein_coding" "Cre03.g198550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g198750","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure EMBRYO DEFECTIVE 2780 (EMB2780)","protein_coding" "Cre03.g199000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g199050","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification protein serine/threonine phosphatasesprotein kinasescatalyticscAMP-dependent protein kinase regulatorsATP bindingprotein serine/threonine phosphatases","protein_coding" "Cre03.g199350","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling factor18 (CHR18)","protein_coding" "Cre03.g199647","No alias","Chlamydomonas reinhardtii","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles. eukaryotic initiation factor 4A-III (EIF4A-III)","protein_coding" "Cre03.g200095","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre03.g200200","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases member of MAP Kinase mitogen-activated protein kinase 18 (MPK18)","protein_coding" "Cre03.g200600","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis. kinesin 1 (ATK1)","protein_coding" "Cre03.g201100","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "Cre03.g201850","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination. homolog of RAD54 (RAD54)","protein_coding" "Cre03.g202000","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre03.g203500","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g204353","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g205249","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre03.g205950","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification CDPK-related kinase CDPK-related kinase (CRK)","protein_coding" "Cre03.g206202","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre03.g206257","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g206369","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g206650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre03.g208833","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure DEAD/DEAH box RNA helicase family protein","protein_coding" "Cre03.g209393","No alias","Chlamydomonas reinhardtii","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2 (OPR2)","protein_coding" "Cre03.g209505","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre03.g210513","No alias","Chlamydomonas reinhardtii","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2 (OPR2)","protein_coding" "Cre03.g210625","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors DNA repair gene. gamma-radiation hypersensitive (RAD5) involved in stable transformation and T-DNA transfer","protein_coding" "Cre03.g210849","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g211600","No alias","Chlamydomonas reinhardtii","30.1 signalling.in sugar and nutrient physiology encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase SNF1 kinase homolog 10 (KIN10)","protein_coding" "Cre04.g213904","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain. cyclin-dependent kinase E1 (CDKE1)","protein_coding" "Cre04.g214350","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Encodes the putative catalytic subunit of the DNA polymerase alpha. Interacts with genes involved in chromatin-mediated cellular memory. ICU2 genetically interacts with TERMINAL FLOWER2, the ortholog of HETEROCHROMATIN PROTEIN1 of animals and yeasts, and with the Polycomb group (PcG) gene CURLY LEAF. A number of regulatory genes were derepressed in the icu2-1 mutant, including genes associated with flowering time, floral meristem, and floral organ identity. Mutant has curled, involute leaves and causes early flowering.","protein_coding" "Cre04.g216600","No alias","Chlamydomonas reinhardtii","29.5.11.20 protein.degradation.ubiquitin.proteasom 26S proteasome AAA-ATPase subunit regulatory particle triple-A ATPase 6A (RPT6A)","protein_coding" "Cre04.g217850","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. white-brown complex homolog protein 11 (WBC11)","protein_coding" "Cre04.g217923","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g217928","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g217940","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g217943","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g217950","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 24 (CPK24)","protein_coding" "Cre04.g218250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g218750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g218800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g218900","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation AAA-type ATPase family protein / ankyrin repeat family protein","protein_coding" "Cre04.g219000","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation AAA-type ATPase family protein / ankyrin repeat family protein","protein_coding" "Cre04.g220050","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g220700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g220850","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. white-brown complex homolog protein 11 (WBC11)","protein_coding" "Cre04.g221650","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure DNA GYRASE A (GYRA)","protein_coding" "Cre04.g222700","No alias","Chlamydomonas reinhardtii","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus member of GCN subfamily GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1)","protein_coding" "Cre04.g223200","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre04.g223500","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g223850","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure RNAhelicase-like 8 (RH8)","protein_coding" "Cre04.g224400","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 3 (PDR3)","protein_coding" "Cre04.g224683","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g226200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g227000","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination. POSTMEIOTIC SEGREGATION 1 (PMS1)","protein_coding" "Cre04.g228208","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g228300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g228650","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 13 (MRP13)","protein_coding" "Cre04.g228800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g228850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g229000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g229100","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre04.g229300","No alias","Chlamydomonas reinhardtii","1.3.13 PS.calvin cycle.rubisco interacting Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. rubisco activase (RCA)","protein_coding" "Cre04.g229948","No alias","Chlamydomonas reinhardtii","27.3.12 RNA.regulation of transcription.C3H zinc finger family FMN-linked oxidoreductases superfamily protein","protein_coding" "Cre04.g230144","No alias","Chlamydomonas reinhardtii","11.8.1.2 lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. long chain base2 (LCB2)","protein_coding" "Cre04.g230438","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre05.g230803","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein","protein_coding" "Cre05.g232750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre05.g233600","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre05.g233800","No alias","Chlamydomonas reinhardtii","29.1.14 protein.aa activation.glycine-tRNA ligase glycyl-tRNA synthetase / glycine--tRNA ligase","protein_coding" "Cre05.g234400","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 12 (NAP12)","protein_coding" "Cre05.g234639","No alias","Chlamydomonas reinhardtii","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cre05.g234661","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre05.g234663","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre05.g235450","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre05.g235500","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation Kinesin motor family protein","protein_coding" "Cre05.g235750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre05.g236950","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling factor18 (CHR18)","protein_coding" "Cre05.g237200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre05.g238290","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre05.g238322","No alias","Chlamydomonas reinhardtii","29.1 protein.aa activation ovule abortion 4 (OVA4)","protein_coding" "Cre05.g238900","No alias","Chlamydomonas reinhardtii","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre05.g239067","No alias","Chlamydomonas reinhardtii","25.8 C1-metabolism.tetrahydrofolate synthase DHFS-FPGS homolog B (DFB)","protein_coding" "Cre05.g239100","No alias","Chlamydomonas reinhardtii","25.8 C1-metabolism.tetrahydrofolate synthase DHFS-FPGS homolog B (DFB)","protein_coding" "Cre05.g241450","No alias","Chlamydomonas reinhardtii","29.3.3 protein.targeting.chloroplast chloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids. CPFTSY","protein_coding" "Cre05.g245950","No alias","Chlamydomonas reinhardtii","26.17 misc.dynamin Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts. DYNAMIN-like 1C (DL1C)","protein_coding" "Cre05.g246200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g248850","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre06.g249150","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases encodes a mitogen-activated protein kinase kinase mitogen-activated protein kinase kinase 3 (MKK3)","protein_coding" "Cre06.g250300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g250650","No alias","Chlamydomonas reinhardtii","26.17 misc.dynamin Dynamin related protein 4C (DRP4C)","protein_coding" "Cre06.g250850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g250902","No alias","Chlamydomonas reinhardtii","13.1.3.4.12 amino acid metabolism.synthesis.aspartate family.methionine.homocysteine S-methyltransferase HMT-1","protein_coding" "Cre06.g251050","No alias","Chlamydomonas reinhardtii","30.1 signalling.in sugar and nutrient physiology encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1. SNF1 kinase homolog 11 (KIN11)","protein_coding" "Cre06.g251400","No alias","Chlamydomonas reinhardtii","8.2.10 TCA / org transformation.other organic acid transformatons.malic The malic enzyme (EC 1.1.1.40) encoded by AtNADP-ME4 is localized to chloroplasts. The gene is expressed throughout the whole plant and during embryogenesis and germination. A possible involvement in the fatty acid biosynthesis has been proposed.","protein_coding" "Cre06.g251800","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure embryo defective 1968 (EMB1968)","protein_coding" "Cre06.g252200","No alias","Chlamydomonas reinhardtii","29.3.3 protein.targeting.chloroplast Encodes a GTP-binding GTP-ase. Component of the chloroplast protein import machinery. Required for import of POR B into plastids. Toc33 phosphorylation may not play an important role in vivo. translocon at the outer envelope membrane of chloroplasts 33 (TOC33)","protein_coding" "Cre06.g252450","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Encodes a member of the DRG (developmentally regulated G-protein) family. Has GTPase activity.","protein_coding" "Cre06.g256050","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g257950","No alias","Chlamydomonas reinhardtii","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase ASPARTATE AMINOTRANSFERASE 1 aspartate aminotransferase 1 (ASP1)","protein_coding" "Cre06.g258200","No alias","Chlamydomonas reinhardtii","29.6 protein.folding P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre06.g258700","No alias","Chlamydomonas reinhardtii","13.2.4.4 amino acid metabolism.degradation.branched chain group.leucine MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion. MCCA","protein_coding" "Cre06.g259150","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "Cre06.g259200","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "Cre06.g259300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g259550","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre06.g262850","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Encodes a member of the Rab GTPase family of proteins. This protein interacts with the tail region of a myosin XI protein (AT5G43900) in a GTP-dependent manner. It has also been identified as an isoprenylated protein.","protein_coding" "Cre06.g263450","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "Cre06.g265100","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 5 (GCN5)","protein_coding" "Cre06.g266000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g266100","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g266150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g266250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g266450","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g267000","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology transferasesfolic acid binding","protein_coding" "Cre06.g267650","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre06.g268150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g269950","No alias","Chlamydomonas reinhardtii","31.2 cell.division ATPase, AAA-type, CDC48 protein","protein_coding" "Cre06.g270850","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling 8 (CHR8)","protein_coding" "Cre06.g271100","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre06.g273300","No alias","Chlamydomonas reinhardtii","29.1.3 protein.aa activation.threonine-tRNA ligase Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion. Threonyl-tRNA synthetase","protein_coding" "Cre06.g273750","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 3 (NAP3)","protein_coding" "Cre06.g273800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g275450","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g277200","No alias","Chlamydomonas reinhardtii","18.6.2 Co-factor and vitamine metabolism.biotin.Diaminopelargonic acid aminotransferase and dethiobiotin synthetase Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase. biotin auxotroph 1 (BIO1)","protein_coding" "Cre06.g278098","No alias","Chlamydomonas reinhardtii","13.2.4.4 amino acid metabolism.degradation.branched chain group.leucine MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion. MCCA","protein_coding" "Cre06.g278139","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins ras-related small GTPase RAB GTPASE HOMOLOG B18 (RAB18)","protein_coding" "Cre06.g278140","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g278148","No alias","Chlamydomonas reinhardtii","13.1.1.1.4 amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH Glyoxylate reductase located in chloroplasts. glyoxylate reductase 2 (GLYR2)","protein_coding" "Cre06.g278163","No alias","Chlamydomonas reinhardtii","13.1.2.3.4 amino acid metabolism.synthesis.glutamate family.arginine.acetylornithine aminotransferase Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600 WIN2: AT4G31750 WIN3: AT5G13320). HOPW1-1-interacting 1 (WIN1)","protein_coding" "Cre06.g278185","No alias","Chlamydomonas reinhardtii","10.1.4 cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD) UDP-glucose dehydrogenase 1 (UGD1)","protein_coding" "Cre06.g278230","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g278231","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g278243","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g278249","No alias","Chlamydomonas reinhardtii","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.","protein_coding" "Cre06.g278254","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g278265","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g281100","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "Cre06.g281600","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g282600","No alias","Chlamydomonas reinhardtii","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre06.g284700","No alias","Chlamydomonas reinhardtii","13.1.1.3.1 amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase Encodes for alanine aminotransferase (ALAAT1), involved in alanine catabolism during plants recovery from hypoxia alanine aminotransferas (AlaAT1)","protein_coding" "Cre06.g284750","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding" "Cre06.g284800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g287400","No alias","Chlamydomonas reinhardtii","31.2 cell.division CDK-activating kinase 4 (CAK4)","protein_coding" "Cre06.g287450","No alias","Chlamydomonas reinhardtii","31.2 cell.division CDK-activating kinase 4 (CAK4)","protein_coding" "Cre06.g287950","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ATRX","protein_coding" "Cre06.g288700","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology Encodes a (D)-2-hydroxyglutarate dehydrogenase. FAD-linked oxidases family protein","protein_coding" "Cre06.g288908","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g289950","No alias","Chlamydomonas reinhardtii","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases encodes a putative DExH-box RNA helicase that acts redundantly with HEN1, HUA1, and HUA2 in the specification of floral organ identity in the third whorl. hua enhancer 2 (HEN2)","protein_coding" "Cre06.g291150","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase RNA HELICASE DRH1 DEAD box RNA helicase 1 (DRH1)","protein_coding" "Cre06.g291400","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g292700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g295450","No alias","Chlamydomonas reinhardtii","13.2.5.2 amino acid metabolism.degradation.serine-glycine-cysteine group.glycine Encodes hydroxypyruvate reductase. hydroxypyruvate reductase (HPR)","protein_coding" "Cre06.g295700","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure MINICHROMOSOME MAINTENANCE 3 (MCM3)","protein_coding" "Cre06.g296050","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "Cre06.g296200","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 25 (CPK25)","protein_coding" "Cre06.g296550","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "Cre06.g296750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g297016","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g297600","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g297850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g298550","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "Cre06.g298650","No alias","Chlamydomonas reinhardtii","29.2.3 protein.synthesis.initiation eukaryotic translation initiation factor 4A-1 eukaryotic translation initiation factor 4A1 (EIF4A1)","protein_coding" "Cre06.g299200","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre06.g300450","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1) Has 745","protein_coding" "Cre06.g301050","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g302800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g303150","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cre06.g304000","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors zinc ion bindingDNA bindinghelicasesATP bindingnucleic acid binding","protein_coding" "Cre06.g304050","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g306400","No alias","Chlamydomonas reinhardtii","17.5.1.1 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase encodes an aminotransferase that belongs to ACC synthase gene family structurally 1-aminocyclopropane-1-carboxylate synthase 11 (ACS11)","protein_coding" "Cre06.g306850","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4)","protein_coding" "Cre06.g306950","No alias","Chlamydomonas reinhardtii","33.99 development.unspecified Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. INCOMPLETE ROOT HAIR ELONGATION (IRE)","protein_coding" "Cre06.g309100","No alias","Chlamydomonas reinhardtii","29.6 protein.folding mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria. heat shock protein 60 (HSP60)","protein_coding" "Cre06.g310100","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cre06.g310850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre06.g311900","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins encodes a small GTPase involved in membrane trafficking. Gene expression is induced by hydrogen peroxide and lines. Lines overexpressing the gene are more tolerant to high salt and hyperosmotic conditions. RAB GTPase homolog G3E (RABG3E)","protein_coding" "Cre07.g312150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g312250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g313000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g313250","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 5 (PDR5)","protein_coding" "Cre07.g313700","No alias","Chlamydomonas reinhardtii","29.1.17 protein.aa activation.glutamate-tRNA ligase Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. glutamate tRNA synthetase (ERS)","protein_coding" "Cre07.g314400","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Encodes a homolog of the yeast SRS2 (Suppressor of RAD Six-screen mutant 2) helicase. The Arabidopsis SRS2 is a functional 3í- to 5í-helicase. Biochemical studies show that SRS2 disrupts recombinogenic DNA intermediates and facilitates single strand annealing.","protein_coding" "Cre07.g314650","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair recA DNA recombination family protein","protein_coding" "Cre07.g314900","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre07.g315400","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g315550","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology AFG1-like ATPase family protein","protein_coding" "Cre07.g316850","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure MINICHROMOSOME MAINTENANCE 4 (MCM4)","protein_coding" "Cre07.g317300","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Encodes a putative serine/threonine kinase (SIK1). SIK1","protein_coding" "Cre07.g319300","No alias","Chlamydomonas reinhardtii","2.2.2.3 major CHO metabolism.degradation.starch.glucan water dikinase Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position. STARCH EXCESS 1 (SEX1)","protein_coding" "Cre07.g319340","No alias","Chlamydomonas reinhardtii","2.2.2.3 major CHO metabolism.degradation.starch.glucan water dikinase Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position. STARCH EXCESS 1 (SEX1)","protein_coding" "Cre07.g319750","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure plant DEAD box-like RNA helicase. RNA helicase 1 (RH1)","protein_coding" "Cre07.g322300","No alias","Chlamydomonas reinhardtii","28.99 DNA.unspecified RAD3-like DNA-binding helicase protein","protein_coding" "Cre07.g322350","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g323100","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre07.g324550","No alias","Chlamydomonas reinhardtii","13.1.5.1.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase encodes a 3-Phosphoglycerate dehydrogenase D-3-phosphoglycerate dehydrogenase","protein_coding" "Cre07.g325350","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. FRAGILE FIBER 1 (FRA1)","protein_coding" "Cre07.g325700","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D. BRAHMA (BRM)","protein_coding" "Cre07.g325754","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification protein kinase, similar to mammal mixed-lineage kinase and Raf protein kinase ATMRK1","protein_coding" "Cre07.g325759","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre07.g325761","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cre07.g326050","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation ATK5 encodes a kinesin protein involved in microtubule spindle morphogenesis. It acts as a minus-end directed motor as well as a plus-end tracking protein (+TIP). Localizes to mitotic spindle midzones and regions rich in growing plus-ends within phragmoplasts. kinesin 5 (ATK5)","protein_coding" "Cre07.g327079","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g327800","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cre07.g328850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g328900","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 17 (CPK17)","protein_coding" "Cre07.g329700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g329850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g332300","No alias","Chlamydomonas reinhardtii","2.2.2.3 major CHO metabolism.degradation.starch.glucan water dikinase Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position. STARCH EXCESS 1 (SEX1)","protein_coding" "Cre07.g332700","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre07.g334200","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase DEAD-box protein abstrakt, putative","protein_coding" "Cre07.g334950","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g335200","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation elongation factor family protein","protein_coding" "Cre07.g335400","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 5 (GCN5)","protein_coding" "Cre07.g336650","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers MUTL protein homolog 3 (MLH3)","protein_coding" "Cre07.g337150","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure replication factor C 2 (RFC2)","protein_coding" "Cre07.g337300","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre07.g338000","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function. MINICHROMOSOME MAINTENANCE 2 (MCM2)","protein_coding" "Cre07.g339100","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g339104","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "Cre07.g339150","No alias","Chlamydomonas reinhardtii","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cre07.g339700","No alias","Chlamydomonas reinhardtii","29.8 protein.assembly and cofactor ligation Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged FeñS clusters. Expressed in embryos and meristems. non-intrinsic ABC protein 7 (NAP7)","protein_coding" "Cre07.g339850","No alias","Chlamydomonas reinhardtii","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "Cre07.g339900","No alias","Chlamydomonas reinhardtii","29.4.1 protein.postranslational modification.kinase Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre07.g340050","No alias","Chlamydomonas reinhardtii","29.2.2 protein.synthesis.ribosome biogenesis GTP-binding family protein","protein_coding" "Cre07.g340250","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre07.g340300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g341251","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre07.g341600","No alias","Chlamydomonas reinhardtii","29.6 protein.folding embryo defective 1241 (EMB1241)","protein_coding" "Cre07.g341700","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Encodes a predicted protein kinase based on sequence similarity. putative protein kinase 1 (PPK1)","protein_coding" "Cre07.g341850","No alias","Chlamydomonas reinhardtii","29.2.3 protein.synthesis.initiation Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal. fu-gaeri1 (FUG1)","protein_coding" "Cre07.g342150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g343333","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g344400","No alias","Chlamydomonas reinhardtii","13.1.5.1.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase encodes a 3-Phosphoglycerate dehydrogenase D-3-phosphoglycerate dehydrogenase","protein_coding" "Cre07.g344550","No alias","Chlamydomonas reinhardtii","13.1.5.1.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase encodes a 3-Phosphoglycerate dehydrogenase D-3-phosphoglycerate dehydrogenase","protein_coding" "Cre07.g344600","No alias","Chlamydomonas reinhardtii","13.1.5.1.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase embryo sac development arrest 9 (EDA9)","protein_coding" "Cre07.g346550","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Mitogen activated protein kinase kinase kinase-related","protein_coding" "Cre07.g347550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g348450","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 24 (CPK24)","protein_coding" "Cre07.g349300","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata. embryo defective 1586 (EMB1586)","protein_coding" "Cre07.g349520","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g349540","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Protein kinase superfamily protein","protein_coding" "Cre07.g351100","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g351150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g351600","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata. embryo defective 1586 (EMB1586)","protein_coding" "Cre07.g351800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre07.g352350","No alias","Chlamydomonas reinhardtii","29.5.7 protein.degradation.metalloprotease encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes. FTSH protease 1 (FTSH1)","protein_coding" "Cre07.g353000","No alias","Chlamydomonas reinhardtii","31.2 cell.division CDK-activating kinase 4 (CAK4)","protein_coding" "Cre07.g353200","No alias","Chlamydomonas reinhardtii","35.2 not assigned.unknown GTP-binding protein, HflX","protein_coding" "Cre07.g355250","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase that negatively regulates the entry into mitosis. WEE1 kinase homolog (WEE1)","protein_coding" "Cre07.g355400","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre07.g357200","No alias","Chlamydomonas reinhardtii","10.1.4 cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD) UDP-glucose dehydrogenase 1 (UGD1)","protein_coding" "Cre08.g358200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g358563","No alias","Chlamydomonas reinhardtii","27.1 RNA.processing ATP-dependent RNA helicase, putative","protein_coding" "Cre08.g358580","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g359350","No alias","Chlamydomonas reinhardtii","11.1.1.2.4 lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxylase Encodes biotin carboxylase subunit (CAC2). acetyl Co-enzyme a carboxylase biotin carboxylase subunit (CAC2)","protein_coding" "Cre08.g359900","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g360050","No alias","Chlamydomonas reinhardtii","11.1.1.2.4 lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxylase Encodes biotin carboxylase subunit (CAC2). acetyl Co-enzyme a carboxylase biotin carboxylase subunit (CAC2)","protein_coding" "Cre08.g360850","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology AFG1-like ATPase family protein","protein_coding" "Cre08.g368150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g368300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g368600","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g368900","No alias","Chlamydomonas reinhardtii","29.1.7 protein.aa activation.alanine-tRNA ligase A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. EMBRYO DEFECTIVE 1030 (EMB1030)","protein_coding" "Cre08.g369700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g369720","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cre08.g369850","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 13 (MRP13)","protein_coding" "Cre08.g369900","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g370450","No alias","Chlamydomonas reinhardtii","29.6 protein.folding unknown function AR192","protein_coding" "Cre08.g370550","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology Encodes a (D)-2-hydroxyglutarate dehydrogenase. FAD-linked oxidases family protein","protein_coding" "Cre08.g372250","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 5 (GCN5)","protein_coding" "Cre08.g372550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g373050","No alias","Chlamydomonas reinhardtii","11.1.1.1 lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation. acetyl-CoA carboxylase 1 (ACC1)","protein_coding" "Cre08.g373300","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre08.g374200","No alias","Chlamydomonas reinhardtii","31.2 cell.division CDK-activating kinase 4 (CAK4)","protein_coding" "Cre08.g375200","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Encodes a protein with similarity to GTPases that is localized to the mitochondrion. Involved in embryogenesis, pollen tube growth and required for mitochondrial development. MIRO-related GTP-ase 1 (MIRO1)","protein_coding" "Cre08.g376800","No alias","Chlamydomonas reinhardtii","29.2.3 protein.synthesis.initiation Translation initiation factor 2, small GTP-binding protein","protein_coding" "Cre08.g377200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g378150","No alias","Chlamydomonas reinhardtii","7.1.1 OPP.oxidative PP.G6PD Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root. glucose-6-phosphate dehydrogenase 3 (G6PD3)","protein_coding" "Cre08.g378950","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g379850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g380600","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g381950","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification yeast YAK1-related gene 1 (YAK1)","protein_coding" "Cre08.g384200","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Guanylate-binding family protein","protein_coding" "Cre08.g384250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g384390","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. helicasesATP-dependent helicasesnucleic acid bindingATP bindingDNA-directed DNA polymerasesDNA binding","protein_coding" "Cre08.g385000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre08.g385050","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling. MAP kinase 9 (MPK9)","protein_coding" "Cre08.g385650","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre08.g385850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g386700","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation Kinesin-13A localized to entire Golgi stacks. Involved in trichome development. KINESIN-13A","protein_coding" "Cre09.g386750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g386758","No alias","Chlamydomonas reinhardtii","13.1.4.1.1 amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1 (CSR1)","protein_coding" "Cre09.g386900","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins ras-related small GTPase RAB GTPASE HOMOLOG B18 (RAB18)","protein_coding" "Cre09.g387208","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification 3-phosphoinositide-dependent protein kinase","protein_coding" "Cre09.g387319","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g387400","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). recovery protein 3 (REV3)","protein_coding" "Cre09.g387726","No alias","Chlamydomonas reinhardtii","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves. aspartate aminotransferase 3 (ASP3)","protein_coding" "Cre09.g387950","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification PB1 domain-containing protein tyrosine kinase","protein_coding" "Cre09.g388000","No alias","Chlamydomonas reinhardtii","31.2 cell.division cyclin dependent kinase activator CDKD1. Nuclear localization. Involved in cell cycle regulation and cell differentiation. cyclin-dependent kinase D11 (CDKD11)","protein_coding" "Cre09.g388689","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification PB1 domain-containing protein tyrosine kinase","protein_coding" "Cre09.g388700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g388875","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre09.g389089","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology Molybdenum cofactor sulfurase family protein","protein_coding" "Cre09.g389430","No alias","Chlamydomonas reinhardtii","29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative","protein_coding" "Cre09.g390000","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure chromatin remodeling factor17 (CHR17)","protein_coding" "Cre09.g390300","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre09.g390763","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins member of RAB gene family RAB GTPase homolog B1C (RABB1C)","protein_coding" "Cre09.g391245","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre09.g392282","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g393850","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification PB1 domain-containing protein tyrosine kinase","protein_coding" "Cre09.g393950","No alias","Chlamydomonas reinhardtii","31.2 cell.division cell division protein ftsH, putative","protein_coding" "Cre09.g394400","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre09.g395600","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis. EMBRYO DEFECTIVE 269 (EMB269)","protein_coding" "Cre09.g395658","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre09.g395695","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre09.g395806","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g396065","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g396102","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Encodes a serine/threonine protein kinase. serine/threonine protein kinase 3 (PK3)","protein_coding" "Cre09.g397200","No alias","Chlamydomonas reinhardtii","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cre09.g397253","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g397350","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure RAD3-like DNA-binding helicase protein","protein_coding" "Cre09.g397845","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g398550","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type AAA-type ATPase - Over 90% homologous to CDC48a cell division cycle 48C (CDC48C)","protein_coding" "Cre09.g399476","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g400330","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g400550","No alias","Chlamydomonas reinhardtii","35.2 not assigned.unknown Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts. NO ASSOCIATED 1 (NOA1)","protein_coding" "Cre09.g400800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g401182","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium encodes a protein similar to ATPases and binds to calmodulin in vitro. This is a single-copy gene and is expressed in all tissues examined. Cam interacting protein 111 (CIP111)","protein_coding" "Cre09.g401812","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure P-loop containing nucleoside triphosphate hydrolases superfamily protein BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65810.1) Has 5699","protein_coding" "Cre09.g401997","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g402450","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g402478","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g403250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g403650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g403800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g403850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g403950","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g404050","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. CONSTITUTIVE TRIPLE RESPONSE 1 (CTR1)","protein_coding" "Cre09.g404550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g405850","No alias","Chlamydomonas reinhardtii","9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7 (NAD7)","protein_coding" "Cre09.g406200","No alias","Chlamydomonas reinhardtii","29.1.40 protein.aa activation.bifunctional aminoacyl-tRNA synthetase OVULE ABORTION 6 (OVA6)","protein_coding" "Cre09.g408250","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "Cre09.g408464","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g409350","No alias","Chlamydomonas reinhardtii","27.2 RNA.transcription member of RLI subfamily RNAse l inhibitor protein 2 (RLI2)","protein_coding" "Cre09.g410332","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g411525","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre09.g413200","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification encodes a GSK3/shaggy-like protein kinase. Gene expression is induced by NaCl and ABA but not KCl, suggesting that this gene may be involved in response to osmotic stress. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. GSK3/SHAGGY-like protein kinase 1 (GSK1)","protein_coding" "Cre09.g413400","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cre09.g413750","No alias","Chlamydomonas reinhardtii","13.1.2.3.4 amino acid metabolism.synthesis.glutamate family.arginine.acetylornithine aminotransferase Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600 WIN2: AT4G31750 WIN3: AT5G13320). HOPW1-1-interacting 1 (WIN1)","protein_coding" "Cre09.g414050","No alias","Chlamydomonas reinhardtii","33.99 development.unspecified RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1)","protein_coding" "Cre09.g414650","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre09.g415450","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1 both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 2 (POK2)","protein_coding" "Cre09.g416050","No alias","Chlamydomonas reinhardtii","13.1.2.3.22 amino acid metabolism.synthesis.glutamate family.arginine.arginosuccinate synthase arginosuccinate synthase family","protein_coding" "Cre09.g416250","No alias","Chlamydomonas reinhardtii","31.1.1.3.8 cell.organisation.cytoskeleton.Myosin.Class VII member of Myosin-like proteins myosin 1 (ATM1)","protein_coding" "Cre09.g416400","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre09.g416750","No alias","Chlamydomonas reinhardtii","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cre10.g418950","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. FRAGILE FIBER 1 (FRA1)","protein_coding" "Cre10.g419050","No alias","Chlamydomonas reinhardtii","9.9 mitochondrial electron transport / ATP synthesis.F1-ATPase ATPase, F1 complex, alpha subunit protein","protein_coding" "Cre10.g419450","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre10.g420900","No alias","Chlamydomonas reinhardtii","29.2.2.2.1 protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases DEA(D/H)-box RNA helicase family protein","protein_coding" "Cre10.g421600","No alias","Chlamydomonas reinhardtii","29.1.3 protein.aa activation.threonine-tRNA ligase Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage. EMBRYO DEFECTIVE 2761 (EMB2761)","protein_coding" "Cre10.g423400","No alias","Chlamydomonas reinhardtii","27.3.12 RNA.regulation of transcription.C3H zinc finger family FMN-linked oxidoreductases superfamily protein","protein_coding" "Cre10.g424300","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre10.g424700","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Mitogen activated protein kinase kinase kinase-related","protein_coding" "Cre10.g424750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g426152","No alias","Chlamydomonas reinhardtii","13.2.3.4.1 amino acid metabolism.degradation.aspartate family.methionine.methionine gamma-lyase Encodes a functional methionine gamma-lyase, a cytosolic enzyme catalyzes the degradation of methionine into methanethiol, alpha-ketobutyrate and ammonia. The catabolism of excess methionine is important to methionine homeostasis. methionine gamma-lyase (MGL)","protein_coding" "Cre10.g427600","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g427700","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase DEA(D/H)-box RNA helicase family protein","protein_coding" "Cre10.g427750","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre10.g428650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g429100","No alias","Chlamydomonas reinhardtii","29.1.40 protein.aa activation.bifunctional aminoacyl-tRNA synthetase Class II aaRS and biotin synthetases superfamily protein","protein_coding" "Cre10.g429250","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cre10.g430950","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination. homolog of RAD54 (RAD54)","protein_coding" "Cre10.g431950","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre10.g432150","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre10.g432250","No alias","Chlamydomonas reinhardtii","29.4.1 protein.postranslational modification.kinase Encodes a member of the cdc2+ family of protein kinases MHK. Similar to the mak genes of rats. mak encodes a protein kinase that may play a role in spermatogenesis. MHK","protein_coding" "Cre10.g433000","No alias","Chlamydomonas reinhardtii","29.1.14 protein.aa activation.glycine-tRNA ligase glycine-tRNA ligase EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1)","protein_coding" "Cre10.g433100","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis. EMBRYO DEFECTIVE 269 (EMB269)","protein_coding" "Cre10.g434500","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g434900","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo. FAD-linked oxidases family protein","protein_coding" "Cre10.g435750","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre10.g436150","No alias","Chlamydomonas reinhardtii","18.4.9 Co-factor and vitamine metabolism.pantothenate.dephospho-CoA kinase (DPCK) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA. ATCOAE","protein_coding" "Cre10.g436600","No alias","Chlamydomonas reinhardtii","33.99 development.unspecified embryo defective 1688 (emb1688)","protein_coding" "Cre10.g436650","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA helicase family protein","protein_coding" "Cre10.g439000","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "Cre10.g439100","No alias","Chlamydomonas reinhardtii","29.6 protein.folding Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1). T-complex protein 1 alpha subunit (TCP-1)","protein_coding" "Cre10.g439150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g440750","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure DNA GYRASE B2","protein_coding" "Cre10.g442700","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre10.g443000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g443250","No alias","Chlamydomonas reinhardtii","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "Cre10.g443300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g443950","No alias","Chlamydomonas reinhardtii","29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein","protein_coding" "Cre10.g444000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g444150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g445650","No alias","Chlamydomonas reinhardtii","31.2 cell.division Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. TITAN7 (TTN7)","protein_coding" "Cre10.g446250","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import. peroxin 6 (PEX6)","protein_coding" "Cre10.g446400","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre10.g446650","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure DNA helicase required for interference-sensitive meiotic crossover events. ROCK-N-ROLLERS (RCK)","protein_coding" "Cre10.g447500","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre10.g448200","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification A member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.","protein_coding" "Cre10.g449020","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g451450","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre10.g451850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g451950","No alias","Chlamydomonas reinhardtii","13.1.1.3.1 amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway. glutamate:glyoxylate aminotransferase (GGT1)","protein_coding" "Cre10.g455600","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Origin Recognition Complex subunit 1b. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with ORC2 and ORC5. Highly expressed in proliferating cells. Expression levels are independent of light regime. origin of replication complex 1B (ORC1B)","protein_coding" "Cre10.g455850","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin. PROLIFERA (PRL)","protein_coding" "Cre10.g456350","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis. TETRASPORE (TES)","protein_coding" "Cre10.g457700","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium predicted to encode calcium-dependent protein kinase and is localized to the ER. Protein is myristoylated in a cell-free extract. Changing the proposed myristoylated site, G residue in the amino terminal, to A prevented the meristoylation . The G to A mutation decreased AtCPK2 membrane association by approximately 50%. calmodulin-domain protein kinase cdpk isoform 2 (CPK2)","protein_coding" "Cre10.g459500","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Nucleolar GTP-binding protein","protein_coding" "Cre10.g460700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g460800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g461050","No alias","Chlamydomonas reinhardtii","34.1 transport.p- and v-ATPases Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology. vacuolar ATP synthase subunit A (VHA-A)","protein_coding" "Cre10.g461150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g461250","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type N-ethylmaleimide sensitive factor N-ethylmaleimide sensitive factor (NSF)","protein_coding" "Cre10.g462050","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre10.g462200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g462350","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre10.g463026","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g463500","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g463550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre10.g464100","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification NPK1-related protein kinase 1S NPK1-related protein kinase 1 (NP1)","protein_coding" "Cre10.g464550","No alias","Chlamydomonas reinhardtii","29.4.1 protein.postranslational modification.kinase Mitogen activated protein kinase kinase kinase-related","protein_coding" "Cre10.g465550","No alias","Chlamydomonas reinhardtii","29.5.5 protein.degradation.serine protease ATP-dependent Clp protease regulatory subunit EARLY RESPONSIVE TO DEHYDRATION 1 (ERD1)","protein_coding" "Cre10.g465900","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre10.g466350","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467536","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467547","No alias","Chlamydomonas reinhardtii","29.1.17 protein.aa activation.glutamate-tRNA ligase Glutamyl/glutaminyl-tRNA synthetase, class Ic","protein_coding" "Cre11.g467553","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation Translation elongation factor EFG/EF2 protein","protein_coding" "Cre11.g467564","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467568","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Encodes 3-phosphoinositide-dependent protein kinase that","protein_coding" "Cre11.g467575","No alias","Chlamydomonas reinhardtii","20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3 (CLPB3)","protein_coding" "Cre11.g467584","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467585","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467586","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467588","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467589","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467610","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Guanylate-binding family protein","protein_coding" "Cre11.g467617","No alias","Chlamydomonas reinhardtii","7.1.3 OPP.oxidative PP.6-phosphogluconate dehydrogenase Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH).","protein_coding" "Cre11.g467626","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467634","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467636","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467644","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g467781","No alias","Chlamydomonas reinhardtii","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus member of GCN subfamily GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1)","protein_coding" "Cre11.g468300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g474800","No alias","Chlamydomonas reinhardtii","13.2.2.3 amino acid metabolism.degradation.glutamate family.arginine Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism. ornithine-delta-aminotransferase (DELTA-OAT)","protein_coding" "Cre11.g476600","No alias","Chlamydomonas reinhardtii","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "Cre11.g477000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g478128","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 3 (GCN3)","protein_coding" "Cre11.g479300","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Helicase protein with RING/U-box domain","protein_coding" "Cre11.g481000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g481104","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g481400","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13. TOUSLED (TSL)","protein_coding" "Cre11.g482483","No alias","Chlamydomonas reinhardtii","28.99 DNA.unspecified RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding" "Cre11.g482800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre11.g482900","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins ras-related small GTPase RAB GTPASE HOMOLOG B18 (RAB18)","protein_coding" "Cre11.g483000","No alias","Chlamydomonas reinhardtii","29.4.1 protein.postranslational modification.kinase Mitogen activated protein kinase kinase kinase-related","protein_coding" "Cre11.g483100","No alias","Chlamydomonas reinhardtii","29.4.1 protein.postranslational modification.kinase Mitogen activated protein kinase kinase kinase-related","protein_coding" "Cre12.g483650","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2. STN8","protein_coding" "Cre12.g484250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g484800","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre12.g485600","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre12.g485800","No alias","Chlamydomonas reinhardtii","29.5.7 protein.degradation.metalloprotease VAR1","protein_coding" "Cre12.g486250","No alias","Chlamydomonas reinhardtii","29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1E (ARFA1E)","protein_coding" "Cre12.g486350","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g486900","No alias","Chlamydomonas reinhardtii","12.4 N-metabolism.misc FMN-linked oxidoreductases superfamily protein","protein_coding" "Cre12.g487100","No alias","Chlamydomonas reinhardtii","29.1.10 protein.aa activation.methionine-tRNA ligase OVULE ABORTION 1 (OVA1)","protein_coding" "Cre12.g487850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g488400","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "Cre12.g489700","No alias","Chlamydomonas reinhardtii","13.1.2.3.21 amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase ornithine carbamoyltransferase (OTC)","protein_coding" "Cre12.g489800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g490200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g493250","No alias","Chlamydomonas reinhardtii","29.2.2 protein.synthesis.ribosome biogenesis Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress. The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues. protein-serine kinase 1 (PK1)","protein_coding" "Cre12.g493400","No alias","Chlamydomonas reinhardtii","31.2 cell.division member of SMC subfamily structural maintenance of chromosome 3 (SMC3)","protein_coding" "Cre12.g493700","No alias","Chlamydomonas reinhardtii","17.1.1.1.1 hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. ABA DEFICIENT 1 (ABA1)","protein_coding" "Cre12.g494500","No alias","Chlamydomonas reinhardtii","31.2 cell.division CDK-activating kinase 4 (CAK4)","protein_coding" "Cre12.g496150","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1) Has 745","protein_coding" "Cre12.g498600","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "Cre12.g498650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g499500","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g499850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g502350","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro. RECQ helicase L2 (RECQL2)","protein_coding" "Cre12.g503850","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ARFA1D","protein_coding" "Cre12.g504250","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre12.g505200","No alias","Chlamydomonas reinhardtii","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases DEA(D/H)-box RNA helicase family protein","protein_coding" "Cre12.g506851","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g508150","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature. chromatin-remodeling protein 11 (CHR11)","protein_coding" "Cre12.g508900","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. MAP kinase 4 (MPK4)","protein_coding" "Cre12.g509000","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. MAP kinase 4 (MPK4)","protein_coding" "Cre12.g510600","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g510900","No alias","Chlamydomonas reinhardtii","29.5.5 protein.degradation.serine protease Encodes ClpX3, a subunit of the Clp protease complex. ATP-dependent Clp protease","protein_coding" "Cre12.g511850","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification shaggy-like kinase 13 (SK13)","protein_coding" "Cre12.g512400","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g513701","No alias","Chlamydomonas reinhardtii","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases hydrolases, acting on acid anhydrides, in phosphorus-containing anhydridesATP-dependent helicasesnucleic acid bindingATP bindingRNA bindinghelicases","protein_coding" "Cre12.g514200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g514600","No alias","Chlamydomonas reinhardtii","35.2 not assigned.unknown Encodes a PPDK regulatory protein that has both protein kinase and protein phosphatase activities towards PPDK (pyruvate orthophosphate dikinase). PPDK regulatory protein (RP1)","protein_coding" "Cre12.g514650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g514850","No alias","Chlamydomonas reinhardtii","20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. CR88","protein_coding" "Cre12.g516200","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1)","protein_coding" "Cre12.g517400","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Encodes Ara7. ARA7","protein_coding" "Cre12.g517600","No alias","Chlamydomonas reinhardtii","29.4.1.59 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "Cre12.g517900","No alias","Chlamydomonas reinhardtii","29.3.3 protein.targeting.chloroplast Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression. Albino or Glassy Yellow 1 (AGY1)","protein_coding" "Cre12.g518000","No alias","Chlamydomonas reinhardtii","29.3.3 protein.targeting.chloroplast Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression. Albino or Glassy Yellow 1 (AGY1)","protein_coding" "Cre12.g519700","No alias","Chlamydomonas reinhardtii","33.99 development.unspecified embryo defective 2001 (EMB2001)","protein_coding" "Cre12.g519900","No alias","Chlamydomonas reinhardtii","33.99 development.unspecified Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis. MURE","protein_coding" "Cre12.g520150","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase RNA helicase family protein","protein_coding" "Cre12.g521200","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure replication factor C1 (RFC1)","protein_coding" "Cre12.g522350","No alias","Chlamydomonas reinhardtii","29.1 protein.aa activation Nucleotidylyl transferase superfamily protein","protein_coding" "Cre12.g522550","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre12.g522850","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre12.g524650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g524950","No alias","Chlamydomonas reinhardtii","33.99 development.unspecified embryo defective 2001 (EMB2001)","protein_coding" "Cre12.g525400","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification high leaf temperature 1 (HT1)","protein_coding" "Cre12.g525750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g525950","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g526051","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g526150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g526250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g526295","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g526450","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g526559","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g526650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g526850","No alias","Chlamydomonas reinhardtii","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre12.g527000","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 34 (CPK34)","protein_coding" "Cre12.g527100","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "Cre12.g527300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g529550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g530000","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases member of MAP Kinase MAP kinase 19 (MPK19)","protein_coding" "Cre12.g530900","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cre12.g531250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g531900","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g532050","No alias","Chlamydomonas reinhardtii","20.1 stress.biotic U-box domain-containing protein kinase family protein","protein_coding" "Cre12.g532450","No alias","Chlamydomonas reinhardtii","10.1.4 cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD) UDP-glucose 6-dehydrogenase family protein","protein_coding" "Cre12.g533050","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins GTP-binding family protein","protein_coding" "Cre12.g533351","No alias","Chlamydomonas reinhardtii","20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3 (CLPB3)","protein_coding" "Cre12.g535100","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g535900","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner ADP-ribosylation factor 3 (ARF3)","protein_coding" "Cre12.g537100","No alias","Chlamydomonas reinhardtii","29.1.9 protein.aa activation.valine-tRNA ligase Required for proper proliferation of basal cells. TWIN 2 (TWN2)","protein_coding" "Cre12.g537400","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g538200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g538300","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre12.g539100","No alias","Chlamydomonas reinhardtii","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases STRESS RESPONSE SUPPRESSOR 1 (STRS1)","protein_coding" "Cre12.g540200","No alias","Chlamydomonas reinhardtii","27.1 RNA.processing P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre12.g540650","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 3 (PDR3)","protein_coding" "Cre12.g540927","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure minichromosome maintenance 9 (MCM9)","protein_coding" "Cre12.g541300","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "Cre12.g542900","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g543052","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g544400","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Protein kinase superfamily protein","protein_coding" "Cre12.g544550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g545750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g545950","No alias","Chlamydomonas reinhardtii","29.4.1 protein.postranslational modification.kinase Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre12.g546050","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g546100","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre12.g549750","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Phosphorylates serine, threonine, and tyrosine dual specificity kinase 1 (ADK1)","protein_coding" "Cre12.g549800","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification casein kinase II catalytic subunit alpha casein kinase alpha 1 (CKA1)","protein_coding" "Cre12.g550300","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre12.g551250","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases encodes a mitogen-activated kinase involved in innate immunity mitogen-activated protein kinase homolog 2 (MPK2)","protein_coding" "Cre12.g551550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g554051","No alias","Chlamydomonas reinhardtii","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "Cre12.g554800","No alias","Chlamydomonas reinhardtii","1.3.12 PS.calvin cycle.PRK phosphoribulokinase (PRK)","protein_coding" "Cre12.g555800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g556250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g560150","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins RAB GTPase homolog 1A (RAB1A)","protein_coding" "Cre12.g560350","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre12.g560668","No alias","Chlamydomonas reinhardtii","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "Cre12.g561550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre13.g562150","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins GTP-binding protein-related","protein_coding" "Cre13.g563300","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre13.g563733","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro. MAP kinase kinase 6 (MKK6)","protein_coding" "Cre13.g563800","No alias","Chlamydomonas reinhardtii","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes an novel myosin isoform. myosin-like protein XIF (XIF)","protein_coding" "Cre13.g564900","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "Cre13.g564950","No alias","Chlamydomonas reinhardtii","29.2.2 protein.synthesis.ribosome biogenesis Ribosomal protein S5/Elongation factor G/III/V family protein","protein_coding" "Cre13.g565200","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification high leaf temperature 1 (HT1)","protein_coding" "Cre13.g565750","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding" "Cre13.g566000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre13.g566350","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre13.g567100","No alias","Chlamydomonas reinhardtii","21.2.1.5 redox.ascorbate and glutathione.ascorbate.L-Galactono-1,4-lactone dehydrogenase L-Galactono-1,4-lactone dehydrogenase, catalyzes the final step of ascorbate biosynthesis "L-galactono-1,4-lactone dehydrogenase" (GLDH)","protein_coding" "Cre13.g567200","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Protein kinase superfamily protein","protein_coding" "Cre13.g567300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre13.g567550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre13.g568050","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre13.g568400","No alias","Chlamydomonas reinhardtii","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the mitochondrion FTSH protease 4 (ftsh4)","protein_coding" "Cre13.g568450","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre13.g568550","No alias","Chlamydomonas reinhardtii","29.2.2 protein.synthesis.ribosome biogenesis Encodes a protein-serine kinase that phosphorylates ribosomal protein in vitro. Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Involved in translational up-regulation of ribosomal proteins. Phosphorylated by PDK1. Interacts with RAPTOR1, which in turn interacts with TOR. SPK6 activity is affected by osmotic stress, and plants overexpressing S6k1 are hypersensitive to osmotic stress. The gene is expressed in all tissues examined, with highest expression level detected in metabolically active tissues. protein-serine kinase 1 (PK1)","protein_coding" "Cre13.g569200","No alias","Chlamydomonas reinhardtii","29.3.4.99 protein.targeting.secretory pathway.unspecified Signal recognition particle, SRP54 subunit protein","protein_coding" "Cre13.g570250","No alias","Chlamydomonas reinhardtii","30.1 signalling.in sugar and nutrient physiology encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase SNF1 kinase homolog 10 (KIN10)","protein_coding" "Cre13.g571700","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 20 (CPK20)","protein_coding" "Cre13.g573800","No alias","Chlamydomonas reinhardtii","23.3.1.3 nucleotide metabolism.salvage.phosphoribosyltransferases.upp Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities. uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1)","protein_coding" "Cre13.g574300","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre13.g574350","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre13.g575650","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre13.g576100","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. The protein is concentrated in nuclear dots arranged around the nucleolus and the nuclear periphery in early prophase cells.","protein_coding" "Cre13.g577800","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre13.g579200","No alias","Chlamydomonas reinhardtii","29.2.2 protein.synthesis.ribosome biogenesis Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. Arabidopsis thaliana protein kinase 19 (ATPK19)","protein_coding" "Cre13.g579650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre13.g580050","No alias","Chlamydomonas reinhardtii","27.3.99 RNA.regulation of transcription.unclassified P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre13.g580300","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre13.g582650","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre13.g584100","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification PB1 domain-containing protein tyrosine kinase","protein_coding" "Cre13.g586250","No alias","Chlamydomonas reinhardtii","18.4.9 Co-factor and vitamine metabolism.pantothenate.dephospho-CoA kinase (DPCK) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA. ATCOAE","protein_coding" "Cre13.g586500","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1 both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 2 (POK2)","protein_coding" "Cre13.g588600","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations. armadillo repeat kinesin 3 (ARK3)","protein_coding" "Cre13.g590300","No alias","Chlamydomonas reinhardtii","23.3.2.2 nucleotide metabolism.salvage.nucleoside kinases.uridine kinase Phosphoribulokinase / Uridine kinase family","protein_coding" "Cre13.g591400","No alias","Chlamydomonas reinhardtii","18.4.5 Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK) Encodes a protein with pantothenate kinase activity. pantothenate kinase 2 (PANK2)","protein_coding" "Cre13.g592000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre13.g592150","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre13.g592300","No alias","Chlamydomonas reinhardtii","12.4 N-metabolism.misc Aldolase-type TIM barrel family protein","protein_coding" "Cre13.g602400","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre13.g603176","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "Cre13.g603225","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre13.g603400","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors zinc ion bindingDNA bindinghelicasesATP bindingnucleic acid binding","protein_coding" "Cre13.g604150","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre13.g605000","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification ACT-like protein tyrosine kinase family protein","protein_coding" "Cre13.g606000","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation elongation factor family protein","protein_coding" "Cre13.g606600","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre13.g606750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre13.g607300","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases MAP kinase 7 (MPK7)","protein_coding" "Cre14.g608700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g611650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g612000","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Encodes a microtubule-associated kinase-like protein RUNKEL (RUK).","protein_coding" "Cre14.g613950","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ATP-binding cassette A2 (ABCA2)","protein_coding" "Cre14.g614400","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors DNA/RNA helicase protein","protein_coding" "Cre14.g614900","No alias","Chlamydomonas reinhardtii","29.1.18 protein.aa activation.glutamine-tRNA ligase ovule abortion 9 (OVA9)","protein_coding" "Cre14.g615350","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g615400","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g615950","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 3 (GCN3)","protein_coding" "Cre14.g616600","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins A new plant-specific member of the dynamin superfamily defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization. FZO-like (FZL)","protein_coding" "Cre14.g618400","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ABC2 homolog 6 (ATH6)","protein_coding" "Cre14.g618600","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 11 (MRP11)","protein_coding" "Cre14.g618860","No alias","Chlamydomonas reinhardtii","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1)","protein_coding" "Cre14.g619166","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre14.g619350","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology AFG1-like ATPase family protein","protein_coding" "Cre14.g619825","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g623950","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g625050","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification high leaf temperature 1 (HT1)","protein_coding" "Cre14.g625400","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g625625","No alias","Chlamydomonas reinhardtii","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the chloroplast and the mitochondrion FTSH protease 11 (FTSH11)","protein_coding" "Cre14.g626466","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g627576","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g627800","No alias","Chlamydomonas reinhardtii","11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein Encodes an acyl-CoA binding protein that is localized to vesicles,and plasma membrane especially in epidermal cells of heart, torpedo and cotyledon stage embryos, cell wall of the seed coat. Northern blot analysis showed that the 1.4 kb ACBP1 mRNA was expressed in silique, root, stem, leaf and flower. acyl-CoA binding protein 1 (ACBP1)","protein_coding" "Cre14.g628200","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification protein kinase, similar to mammal mixed-lineage kinase and Raf protein kinase ATMRK1","protein_coding" "Cre14.g628237","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification protein kinase, similar to mammal mixed-lineage kinase and Raf protein kinase ATMRK1","protein_coding" "Cre14.g628400","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g629750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g630859","No alias","Chlamydomonas reinhardtii","13.2.4.3 amino acid metabolism.degradation.branched chain group.valine 6-phosphogluconate dehydrogenase family protein","protein_coding" "Cre14.g630895","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. EMBRYO DEFECTIVE 2421 (EMB2421)","protein_coding" "Cre14.g632000","No alias","Chlamydomonas reinhardtii","29.6 protein.folding embryo defective 1241 (EMB1241)","protein_coding" "Cre14.g632650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g632700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre14.g632750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre15.g634701","No alias","Chlamydomonas reinhardtii","28.99 DNA.unspecified DEAD/DEAH box RNA helicase family protein","protein_coding" "Cre15.g634878","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre15.g635700","No alias","Chlamydomonas reinhardtii","29.4.1 protein.postranslational modification.kinase Mitogen activated protein kinase kinase kinase-related","protein_coding" "Cre15.g636896","No alias","Chlamydomonas reinhardtii","35.1 not assigned.no ontology FMN-linked oxidoreductases superfamily protein","protein_coding" "Cre15.g637761","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre15.g640750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre15.g641800","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Ras-related small GTP-binding family protein","protein_coding" "Cre15.g644051","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g648700","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cre16.g649100","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre16.g650151","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "Cre16.g650650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g651650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g652050","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring. CTF2A","protein_coding" "Cre16.g652150","No alias","Chlamydomonas reinhardtii","4.1.6 glycolysis.cytosolic branch.fructose-2,6-bisphosphatase (Fru2,6BisPase) Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase. "fructose-2,6-bisphosphatase" (F2KP)","protein_coding" "Cre16.g652750","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "Cre16.g654850","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre16.g654900","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre16.g655450","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "Cre16.g656700","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation ATK5 encodes a kinesin protein involved in microtubule spindle morphogenesis. It acts as a minus-end directed motor as well as a plus-end tracking protein (+TIP). Localizes to mitotic spindle midzones and regions rich in growing plus-ends within phragmoplasts. kinesin 5 (ATK5)","protein_coding" "Cre16.g657350","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre16.g658450","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins embryo defective 2738 (emb2738)","protein_coding" "Cre16.g658526","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. non-intrinsic ABC protein 11 (NAP11)","protein_coding" "Cre16.g658650","No alias","Chlamydomonas reinhardtii","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes an novel myosin isoform. myosin-like protein XIF (XIF)","protein_coding" "Cre16.g659050","No alias","Chlamydomonas reinhardtii","18.5.2.8.1 Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis. magnesium ion bindingthiamin pyrophosphate bindinghydro-lyasescatalytics2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases","protein_coding" "Cre16.g660900","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre16.g661100","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre16.g661200","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g661250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g661300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g661900","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre16.g662000","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre16.g662750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g663000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g663050","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Guanylate-binding family protein","protein_coding" "Cre16.g663200","No alias","Chlamydomonas reinhardtii","29.2.2 protein.synthesis.ribosome biogenesis Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. Arabidopsis thaliana protein kinase 19 (ATPK19)","protein_coding" "Cre16.g663280","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g663350","No alias","Chlamydomonas reinhardtii","29.5.5 protein.degradation.serine protease Encodes ClpX3, a subunit of the Clp protease complex. ATP-dependent Clp protease","protein_coding" "Cre16.g664500","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification A member of ARF GTPase family. Arabidopsis has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 (GI:965483) (Daucus carota), other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct.","protein_coding" "Cre16.g664850","No alias","Chlamydomonas reinhardtii","29.4.1 protein.postranslational modification.kinase Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre16.g665364","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g665600","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification casein kinase II catalytic subunit alpha casein kinase alpha 1 (CKA1)","protein_coding" "Cre16.g665650","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins GTP-binding protein, HflX","protein_coding" "Cre16.g665950","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure minichromosome maintenance 8 (MCM8)","protein_coding" "Cre16.g666200","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "Cre16.g669525","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 8 (NAP8)","protein_coding" "Cre16.g669800","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre16.g672385","No alias","Chlamydomonas reinhardtii","13.1.7.7 amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal. histidinol phosphate aminotransferase 1 (HPA1)","protein_coding" "Cre16.g672497","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre16.g672602","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g673393","No alias","Chlamydomonas reinhardtii","28.99 DNA.unspecified Encodes RECQ3, an ATP-dependent helicase. RecQl3","protein_coding" "Cre16.g673600","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g673821","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre16.g674065","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g674179","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g674291","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g674403","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g674500","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ATP-binding cassette A2 (ABCA2)","protein_coding" "Cre16.g675750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g675850","No alias","Chlamydomonas reinhardtii","11.9.4.2 lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH Encodes a protein with similarity to acyl-CoA dehydrogenases. Mutations in IBR3 render plants resistant to indole-3-butryic acid, a putative storage form of the biologically active auxin IAA (indole-3-acetic acid). IBR3 is hypothesized to carry out the second step in a β","protein_coding" "Cre16.g676200","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Guanylate-binding family protein","protein_coding" "Cre16.g676309","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g676350","No alias","Chlamydomonas reinhardtii","31.2 cell.division ATPase, AAA-type, CDC48 protein","protein_coding" "Cre16.g676400","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre16.g676850","No alias","Chlamydomonas reinhardtii","29.5 protein.degradation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre16.g679200","No alias","Chlamydomonas reinhardtii","29.3.5 protein.targeting.peroxisomes an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals. peroxisome 1 (PEX1)","protein_coding" "Cre16.g680944","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre16.g681238","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins tRNA modification GTPase, putative","protein_coding" "Cre16.g681850","No alias","Chlamydomonas reinhardtii","23.3.1.3 nucleotide metabolism.salvage.phosphoribosyltransferases.upp Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities. uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1)","protein_coding" "Cre16.g683500","No alias","Chlamydomonas reinhardtii","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases RNA helicase 36 (RH36)","protein_coding" "Cre16.g683550","No alias","Chlamydomonas reinhardtii","26.10 misc.cytochrome P450 Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism. P450 reductase 1 (ATR1)","protein_coding" "Cre16.g683950","No alias","Chlamydomonas reinhardtii","29.3.4.99 protein.targeting.secretory pathway.unspecified signal recognition particle receptor alpha subunit family protein","protein_coding" "Cre16.g684350","No alias","Chlamydomonas reinhardtii","13.1.1.1.4 amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH Glyoxylate reductase located in chloroplasts. glyoxylate reductase 2 (GLYR2)","protein_coding" "Cre16.g684400","No alias","Chlamydomonas reinhardtii","31.2 cell.division CDK-activating kinase 4 (CAK4)","protein_coding" "Cre16.g684450","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g684550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g685389","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Encodes CBL-interacting protein kinase 12 (CIPK12). CBL-interacting protein kinase 12 (CIPK12)","protein_coding" "Cre16.g685450","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g685613","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g686734","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g686950","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type Necessary for sister chromatid cohesion. Acts in synergy with ETG1. CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)","protein_coding" "Cre16.g687400","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre16.g687550","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 14 (NAP14)","protein_coding" "Cre16.g687800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g688526","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2. STN8","protein_coding" "Cre16.g689700","No alias","Chlamydomonas reinhardtii","1.2.6 PS.photorespiration.hydroxypyruvate reductase D-isomer specific 2-hydroxyacid dehydrogenase family protein","protein_coding" "Cre16.g689871","No alias","Chlamydomonas reinhardtii","29.1.5 protein.aa activation.isoleucine-tRNA ligase ovule abortion 2 (OVA2)","protein_coding" "Cre16.g690431","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g691800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre16.g691888","No alias","Chlamydomonas reinhardtii","4.1.6 glycolysis.cytosolic branch.fructose-2,6-bisphosphatase (Fru2,6BisPase) Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase. "fructose-2,6-bisphosphatase" (F2KP)","protein_coding" "Cre16.g692228","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Protein kinase superfamily protein","protein_coding" "Cre16.g692300","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of TAP subfamily transporter associated with antigen processing protein 1 (TAP1)","protein_coding" "Cre16.g692550","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair Encodes the Arabidopsis homolog of MSH4, a meiosis-specific member of the MutS-homolog family of genes. It is expressed only in floral tissues and only during early meiotic prophase I, preceding the synapsis of homologous chromosomes. It is involved in the early steps of recombination. MUTS-like protein 4 (MSH4)","protein_coding" "Cre16.g693203","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cre16.g694550","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Protein kinase superfamily protein","protein_coding" "Cre16.g694950","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g696900","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre17.g696950","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre17.g698550","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre17.g700133","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g700166","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g700300","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type CDC48 - like protein AAA-type ATPaseCell. division control protein 48 homolog B cell division cycle 48B (CDC48B)","protein_coding" "Cre17.g702600","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre17.g705350","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g706300","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair UV damage and heat induce a common stress response in plants that leads to tissue death and reduced chloroplast function. The UVH6 product is suggested to be a negative regulator of this response. ULTRAVIOLET HYPERSENSITIVE 6 (UVH6)","protein_coding" "Cre17.g707650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g707800","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g708250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g708800","No alias","Chlamydomonas reinhardtii","21.2.2 redox.ascorbate and glutathione.glutathione Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol. glutathione synthetase 2 (GSH2)","protein_coding" "Cre17.g709500","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling. MAP kinase 9 (MPK9)","protein_coding" "Cre17.g709750","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases member of MAP Kinase MAP kinase 20 (MPK20)","protein_coding" "Cre17.g709900","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "Cre17.g710000","No alias","Chlamydomonas reinhardtii","29.4.1 protein.postranslational modification.kinase Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain","protein_coding" "Cre17.g710150","No alias","Chlamydomonas reinhardtii","29.5.11.20 protein.degradation.ubiquitin.proteasom AAA-type ATPase family protein","protein_coding" "Cre17.g713650","No alias","Chlamydomonas reinhardtii","28.2 DNA.repair Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. MUTS-homologue 5 (MSH5)","protein_coding" "Cre17.g713750","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g715050","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g716450","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g717050","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cre17.g718950","No alias","Chlamydomonas reinhardtii","1.3.13 PS.calvin cycle.rubisco interacting P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre17.g719000","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure DEAD/DEAH box RNA helicase family protein","protein_coding" "Cre17.g719450","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g719900","No alias","Chlamydomonas reinhardtii","2.2.2.3 major CHO metabolism.degradation.starch.glucan water dikinase chloroplastidic phosphoglucan, water dikinase (PWD) which is required for normal degradation of leaf starch in Arabidopsis. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C3 position.","protein_coding" "Cre17.g720000","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g720050","No alias","Chlamydomonas reinhardtii","29.5.7 protein.degradation.metalloprotease encodes a FtsH protease that is localized to the chloroplast FTSH protease 8 (FTSH8)","protein_coding" "Cre17.g721000","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ABC2 homolog 7 (ATH7)","protein_coding" "Cre17.g721850","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g722350","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. RAS 5 (RA-5)","protein_coding" "Cre17.g723300","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling. MAP kinase 9 (MPK9)","protein_coding" "Cre17.g723500","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 1 (PDR1)","protein_coding" "Cre17.g724150","No alias","Chlamydomonas reinhardtii","26.17 misc.dynamin Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. dynamin-related protein 3A (DRP3A)","protein_coding" "Cre17.g725150","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 7 (PGP7)","protein_coding" "Cre17.g725200","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 12 (PGP12)","protein_coding" "Cre17.g725550","No alias","Chlamydomonas reinhardtii","7.1.1 OPP.oxidative PP.G6PD glucose-6-phosphate dehydrogenase 5 (G6PD5)","protein_coding" "Cre17.g726150","No alias","Chlamydomonas reinhardtii","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre17.g726950","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g727300","No alias","Chlamydomonas reinhardtii","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 1 (OPR1)","protein_coding" "Cre17.g727650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g727700","No alias","Chlamydomonas reinhardtii","27.1.2 RNA.processing.RNA helicase embryo defective 1138 (emb1138)","protein_coding" "Cre17.g728700","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification member of MEKK subfamily NPK1-related protein kinase 2 (NP2)","protein_coding" "Cre17.g730950","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2 both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 1 (POK1)","protein_coding" "Cre17.g731050","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 9 (NAP9)","protein_coding" "Cre17.g731700","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "Cre17.g732300","No alias","Chlamydomonas reinhardtii","3.8.1 minor CHO metabolism.galactose.galactokinases Encodes a protein with galactose kinase activity. The gene was shown to complement the yeast Æ’gal1 mutant defective in the galactokinase gene GAL1. GALK","protein_coding" "Cre17.g733300","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification member of MEKK subfamily NPK1-related protein kinase 2 (NP2)","protein_coding" "Cre17.g733650","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g734100","No alias","Chlamydomonas reinhardtii","23.1.2.20 nucleotide metabolism.synthesis.purine.adenylosuccinate synthase encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate) adenylosuccinate synthase (ADSS)","protein_coding" "Cre17.g734200","No alias","Chlamydomonas reinhardtii","13.1.3.5.3 amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139. ABERRANT GROWTH AND DEATH 2 (AGD2)","protein_coding" "Cre17.g734250","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g734300","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g734612","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 10 (MRP10)","protein_coding" "Cre17.g734644","No alias","Chlamydomonas reinhardtii","17.3.1.2.99 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity. XF1","protein_coding" "Cre17.g735200","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "Cre17.g735550","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g736250","No alias","Chlamydomonas reinhardtii","29.4 protein.postranslational modification PAS domain-containing protein tyrosine kinase family protein","protein_coding" "Cre17.g737250","No alias","Chlamydomonas reinhardtii","29.2.4 protein.synthesis.elongation Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS. MATERNAL EFFECT EMBRYO ARREST 5 (MEE5)","protein_coding" "Cre17.g739752","No alias","Chlamydomonas reinhardtii","29.5.7 protein.degradation.metalloprotease FtsH extracellular protease family","protein_coding" "Cre17.g741350","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre17.g741450","No alias","Chlamydomonas reinhardtii","1.3.13 PS.calvin cycle.rubisco interacting encodes the beta subunit of the chloroplast chaperonin 60, a homologue of bacterial GroEL. Mutants in this gene develops lesions on its leaves, expresses systemic acquired resistance (SAR) and develops accelerated cell death to heat shock stress. The protein has molecular chaperone activity for suppressing protein aggregation in vitro.","protein_coding" "Cre17.g741500","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g741700","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre17.g742250","No alias","Chlamydomonas reinhardtii","29.4.1 protein.postranslational modification.kinase Protein kinase superfamily protein","protein_coding" "Cre17.g743547","No alias","Chlamydomonas reinhardtii","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "Cre17.g743797","No alias","Chlamydomonas reinhardtii","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "Cre17.g744147","No alias","Chlamydomonas reinhardtii","28.1 DNA.synthesis/chromatin structure embryo defective 1507 (emb1507)","protein_coding" "Cre17.g745447","No alias","Chlamydomonas reinhardtii","30.6 signalling.MAP kinases member of MAP Kinase MAP kinase 15 (MPK15)","protein_coding" "Cre17.g747347","No alias","Chlamydomonas reinhardtii","30.5 signalling.G-proteins GTP-binding family protein","protein_coding" "Cre17.g747397","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre18.g749447","No alias","Chlamydomonas reinhardtii","13.1.3.6.1.10 amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine. aspartate kinase-homoserine dehydrogenase ii (AK-HSDH II)","protein_coding" "Cre19.g750197","No alias","Chlamydomonas reinhardtii","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "Cre19.g750597","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 34 (CPK34)","protein_coding" "Cre19.g750797","No alias","Chlamydomonas reinhardtii","No description available","protein_coding" "Cre51.g761547","No alias","Chlamydomonas reinhardtii","30.3 signalling.calcium unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus recombinant protein is fully active and induced by Ca2+ calmodulin-like domain protein kinase 9 (CDPK9)","protein_coding" "GSVIVT01000008001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01000017001","No alias","Vitis vinifera","30.2.18 signalling.receptor kinases.extensin Protein kinase superfamily protein","protein_coding" "GSVIVT01000037001","No alias","Vitis vinifera","16.1.2.4 secondary metabolism.isoprenoids.mevalonate pathway.mevalonate kinase Encodes a protein with mevalonate kinase activity involved in the mevalonate pathway. mevalonate kinase (MK)","protein_coding" "GSVIVT01000041001","No alias","Vitis vinifera","29.1.11 protein.aa activation.serine-tRNA ligase seryl-tRNA synthetase / serine--tRNA ligase","protein_coding" "GSVIVT01000044001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes a protein with similarity to GTPases that is localized to the mitochondrion. Involved in embryogenesis, pollen tube growth and required for mitochondrial development. MIRO-related GTP-ase 1 (MIRO1)","protein_coding" "GSVIVT01000047001","No alias","Vitis vinifera","29.4 protein.postranslational modification NPK1-related protein kinase 1S NPK1-related protein kinase 1 (NP1)","protein_coding" "GSVIVT01000050001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01000087001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Encodes the catalytic subunit of DNA polymerase zeta.Mutants are sensitive to UV-B radiation. Gene is involved in damage-tolerance mechanisms through translesion synthesis(TLS). recovery protein 3 (REV3)","protein_coding" "GSVIVT01000132001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01000149001","No alias","Vitis vinifera","29.4 protein.postranslational modification casein kinase II catalytic subunit alpha "casein kinase II, alpha chain 2" (CKA2)","protein_coding" "GSVIVT01000151001","No alias","Vitis vinifera","11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity. acyl-CoA-binding domain 3 (ACBP3)","protein_coding" "GSVIVT01000224001","No alias","Vitis vinifera","29.4 protein.postranslational modification A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1F (ARFA1F)","protein_coding" "GSVIVT01000238001","No alias","Vitis vinifera","30.3 signalling.calcium unique family of enzymes containing a single polypeptide chain with a kinase domain at the amino terminus and a putative calcium-binding EF hands structure at the carboxyl terminus recombinant protein is fully active and induced by Ca2+ calmodulin-like domain protein kinase 9 (CDPK9)","protein_coding" "GSVIVT01000256001","No alias","Vitis vinifera","35.2 not assigned.unknown member of MEKK subfamily mitogen-activated protein kinase kinase kinase 21 (MAPKKK21)","protein_coding" "GSVIVT01000259001","No alias","Vitis vinifera","11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion. long-chain base1 (LCB1)","protein_coding" "GSVIVT01000266001","No alias","Vitis vinifera","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01000288001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "GSVIVT01000352001","No alias","Vitis vinifera","30.2.25 signalling.receptor kinases.wall associated kinase Wall-associated kinase family protein","protein_coding" "GSVIVT01000357001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01000391001","No alias","Vitis vinifera","13.1.1.1.1 amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase glutamate decarboxylase 4 (GAD4)","protein_coding" "GSVIVT01000454001","No alias","Vitis vinifera","16.4.1 secondary metabolism.N misc.alkaloid-like Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "GSVIVT01000527001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01000561001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01000580001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "GSVIVT01000590001","No alias","Vitis vinifera","29.4 protein.postranslational modification TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01000634001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000635001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000639001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000641001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000642001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000646001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000655001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000657001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000663001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01000666001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000711001","No alias","Vitis vinifera","30.5 signalling.G-proteins Guanylate-binding family protein","protein_coding" "GSVIVT01000723001","No alias","Vitis vinifera","23.3.2.2 nucleotide metabolism.salvage.nucleoside kinases.uridine kinase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01000756001","No alias","Vitis vinifera","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01000784001","No alias","Vitis vinifera","30.6 signalling.MAP kinases member of MAP Kinase MAP kinase 20 (MPK20)","protein_coding" "GSVIVT01000821001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase DEAD-box protein required for efficient group II intron splicing in mitochondria. putative mitochondrial RNA helicase 2 (PMH2)","protein_coding" "GSVIVT01000825001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "GSVIVT01000836001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01000840001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000842001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000871001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000879001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000882001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000884001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01000913001","No alias","Vitis vinifera","7.1.1 OPP.oxidative PP.G6PD Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is most highly expressed in root. glucose-6-phosphate dehydrogenase 2 (G6PD2)","protein_coding" "GSVIVT01000937001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase. avrPphB susceptible 1 (PBS1)","protein_coding" "GSVIVT01000973001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01001045001","No alias","Vitis vinifera","27.1.20 RNA.processing.degradation dicer Encodes an RNase III-like enzyme that catalyzes processing of trans-acting small interfering RNA precursors in a distinct small RNA biogenesis pathway. The protein is also involved in the production of 21-nt primary siRNAs from both inverted-repeat constructs and endogenous sequences, as well as the RDR6-dependent 21-nt secondary siRNAs involved in long-range cell-to-cell signaling. It binds DRB4, a ds-RNA binding protein. dicer-like 4 (DCL4)","protein_coding" "GSVIVT01001046001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin. MINICHROMOSOME MAINTENANCE 5 (MCM5)","protein_coding" "GSVIVT01001060001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01001061001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01001078001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc Encodes a protein with predicted Ser/Thr kinase activity and membrane localization that is involved in the CLV3 signaling pathway that represses WUS expression in the meristem. Loss of function of CRN can suppress the phenotype caused by overexpression of CLV3. SOL2 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol2 partially suppresses the short root phenotype caused by CLE19 overexpression. Mutant flowers have extra carpels. CORYNE (CRN)","protein_coding" "GSVIVT01001092001","No alias","Vitis vinifera","29.1.14 protein.aa activation.glycine-tRNA ligase glycyl-tRNA synthetase / glycine--tRNA ligase","protein_coding" "GSVIVT01001119001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Encodes MCM2 (MINICHROMOSOME MAINTENANCE 2), a protein essential to embryo development. Overexpression results in altered root meristem function. MINICHROMOSOME MAINTENANCE 2 (MCM2)","protein_coding" "GSVIVT01001190001","No alias","Vitis vinifera","29.5 protein.degradation Protein kinase superfamily protein","protein_coding" "GSVIVT01001194001","No alias","Vitis vinifera","13.2.4.4 amino acid metabolism.degradation.branched chain group.leucine MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion. MCCA","protein_coding" "GSVIVT01001199001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01001280001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01001281001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "GSVIVT01001282001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01001284001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "GSVIVT01001348001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01001352001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01001372001","No alias","Vitis vinifera","17.1.1.1.1 hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. ABA DEFICIENT 1 (ABA1)","protein_coding" "GSVIVT01001382001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01001399001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a receptor-like protein kinase. receptor-like protein kinase 1 (RLK1)","protein_coding" "GSVIVT01001401001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01001442001","No alias","Vitis vinifera","30.2.26 signalling.receptor kinases.crinkly like Protein kinase superfamily protein","protein_coding" "GSVIVT01001444001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01001448001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01001457001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01001461001","No alias","Vitis vinifera","17.4.1 hormone metabolism.cytokinin.synthesis-degradation This gene used to be called AtCKX7. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase/dehydrogenase 6 (CKX6)","protein_coding" "GSVIVT01001463001","No alias","Vitis vinifera","11.5.2 lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+) Encodes a protein with NAD-dependent glycerol-3-phosphate (G3P) dehydrogenase which was shown to complement an Escherichia coli strain: BB20-14, auxotrophic for glycerol/G3P due to a loss-of-function mutation in the gpsA gene.","protein_coding" "GSVIVT01001469001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01001471001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01001497001","No alias","Vitis vinifera","31.1 cell.organisation Kinesin-13A localized to entire Golgi stacks. Involved in trichome development. KINESIN-13A","protein_coding" "GSVIVT01001564001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01001600001","No alias","Vitis vinifera","30.2.2 signalling.receptor kinases.leucine rich repeat II Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. later somatic embryogenesis receptor-like kinase 1 (SERK1)","protein_coding" "GSVIVT01001640001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01001660001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "GSVIVT01001679001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a receptor-like protein kinase. receptor-like protein kinase 1 (RLK1)","protein_coding" "GSVIVT01001692001","No alias","Vitis vinifera","13.1.7.9 amino acid metabolism.synthesis.histidine.histidinol dehydrogenase Encodes histidinol dehydrogenase. Up-regulated in response to UV-B. histidinol dehydrogenase (HDH)","protein_coding" "GSVIVT01001694001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 4 (GCN4)","protein_coding" "GSVIVT01001702001","No alias","Vitis vinifera","30.2.19 signalling.receptor kinases.legume-lectin Concanavalin A-like lectin protein kinase family protein","protein_coding" "GSVIVT01001790001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins Disease resistance protein (TIR-NBS-LRR class)","protein_coding" "GSVIVT01001806001","No alias","Vitis vinifera","23.3.1.3 nucleotide metabolism.salvage.phosphoribosyltransferases.upp Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities. uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1)","protein_coding" "GSVIVT01001811001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc Protein kinase superfamily protein","protein_coding" "GSVIVT01001847001","No alias","Vitis vinifera","7.1.1 OPP.oxidative PP.G6PD Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. glucose-6-phosphate dehydrogenase 6 (G6PD6)","protein_coding" "GSVIVT01001872001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type Necessary for sister chromatid cohesion. Acts in synergy with ETG1. CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)","protein_coding" "GSVIVT01002055001","No alias","Vitis vinifera","35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "GSVIVT01002075001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01002205001","No alias","Vitis vinifera","29.4 protein.postranslational modification D6 protein kinase like 2 (D6PKL2)","protein_coding" "GSVIVT01002212001","No alias","Vitis vinifera","30.2.2 signalling.receptor kinases.leucine rich repeat II leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "GSVIVT01002223001","No alias","Vitis vinifera","30.2.2 signalling.receptor kinases.leucine rich repeat II leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "GSVIVT01002253001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01002273001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog H1E (RABH1e)","protein_coding" "GSVIVT01002278001","No alias","Vitis vinifera","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01002319001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "GSVIVT01002328001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01002339001","No alias","Vitis vinifera","33.99 development.unspecified embryo defective 2001 (EMB2001)","protein_coding" "GSVIVT01002389001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01002450001","No alias","Vitis vinifera","35.2 not assigned.unknown GTP-binding protein, HflX","protein_coding" "GSVIVT01002482001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01002619001","No alias","Vitis vinifera","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01002636001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01002637001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01002667001","No alias","Vitis vinifera","2.2.1.4 major CHO metabolism.degradation.sucrose.hexokinase Encodes a putative hexokinase. hexokinase-like 3 (HKL3)","protein_coding" "GSVIVT01002708001","No alias","Vitis vinifera","17.5.1.1 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase Encodes an auxin inducible ACC synthase. 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8)","protein_coding" "GSVIVT01002785001","No alias","Vitis vinifera","30.5 signalling.G-proteins member of RAB gene family RAB GTPase homolog B1C (RABB1C)","protein_coding" "GSVIVT01002864001","No alias","Vitis vinifera","29.4.1.56 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI Protein kinase superfamily protein","protein_coding" "GSVIVT01002949001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. white-brown complex homolog protein 11 (WBC11)","protein_coding" "GSVIVT01002973001","No alias","Vitis vinifera","17.3.1.2.8 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF1 Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein. DWARF 1 (DWF1)","protein_coding" "GSVIVT01003117001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein phosphatase 2C family protein","protein_coding" "GSVIVT01003144001","No alias","Vitis vinifera","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus member of GCN subfamily GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1)","protein_coding" "GSVIVT01003165001","No alias","Vitis vinifera","13.1.5.1.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase embryo sac development arrest 9 (EDA9)","protein_coding" "GSVIVT01003253001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure MINICHROMOSOME MAINTENANCE 6 (MCM6)","protein_coding" "GSVIVT01003262001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003283001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01003389001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003413001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. white-brown complex homolog protein 11 (WBC11)","protein_coding" "GSVIVT01003415001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog A4A (RABA4a)","protein_coding" "GSVIVT01003419001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003469001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003526001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type Necessary for sister chromatid cohesion. Acts in synergy with ETG1. CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)","protein_coding" "GSVIVT01003554001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003555001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003562001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003563001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003565001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003566001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003570001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003571001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003572001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003592001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type Necessary for sister chromatid cohesion. Acts in synergy with ETG1. CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)","protein_coding" "GSVIVT01003703001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01003781001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "GSVIVT01003821001","No alias","Vitis vinifera","16.4.1 secondary metabolism.N misc.alkaloid-like Although this enzyme is predicted to encode a strictosidine synthase (SS), it lacks a conserved catalytic glutamate residue found in active SS enzymes and it is not expected to have SS activity. strictosidine synthase-like 4 (SSL4)","protein_coding" "GSVIVT01003847001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "GSVIVT01003880001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type Necessary for sister chromatid cohesion. Acts in synergy with ETG1. CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)","protein_coding" "GSVIVT01003916001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01003940001","No alias","Vitis vinifera","5.2 fermentation.PDC pyruvate decarboxylase-2 pyruvate decarboxylase-2 (PDC2)","protein_coding" "GSVIVT01003948001","No alias","Vitis vinifera","31.1 cell.organisation Di-glucose binding protein with Kinesin motor domain","protein_coding" "GSVIVT01003989001","No alias","Vitis vinifera","11.5.2 lipid metabolism.glyceral metabolism.Glycerol-3-phosphate dehydrogenase (NAD+) NAD-dependent glycerol-3-phosphate dehydrogenase family protein","protein_coding" "GSVIVT01004004001","No alias","Vitis vinifera","30.2.10 signalling.receptor kinases.leucine rich repeat X Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. BAK1-interacting receptor-like kinase 1 (BIR1)","protein_coding" "GSVIVT01004013001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01004021001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01004061001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01004064001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01004084001","No alias","Vitis vinifera","1.2.3 PS.photorespiration.aminotransferases peroxisomal Encodes a protein with glyoxylate aminotransferase activity. It can act on a number of different small substrates and amino acids in vitro. alanine-2-oxoglutarate aminotransferase 2 (AOAT2)","protein_coding" "GSVIVT01004091001","No alias","Vitis vinifera","30.2.21 signalling.receptor kinases.lysine motif protein kinase family protein / peptidoglycan-binding LysM domain-containing protein","protein_coding" "GSVIVT01004101001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01004105001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01004121001","No alias","Vitis vinifera","7.1.3 OPP.oxidative PP.6-phosphogluconate dehydrogenase Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH).","protein_coding" "GSVIVT01004254001","No alias","Vitis vinifera","30.6 signalling.MAP kinases member of MEKK subfamily mitogen-activated protein kinase kinase kinase 5 (MAPKKK5)","protein_coding" "GSVIVT01004571001","No alias","Vitis vinifera","17.5.1.1 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase Encodes an auxin inducible ACC synthase. 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8)","protein_coding" "GSVIVT01004727001","No alias","Vitis vinifera","28.2 DNA.repair Encodes the Arabidopsis homolog of MSH4, a meiosis-specific member of the MutS-homolog family of genes. It is expressed only in floral tissues and only during early meiotic prophase I, preceding the synapsis of homologous chromosomes. It is involved in the early steps of recombination. MUTS-like protein 4 (MSH4)","protein_coding" "GSVIVT01004784001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01004785001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "GSVIVT01004787001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "GSVIVT01004788001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "GSVIVT01004794001","No alias","Vitis vinifera","17.5.1.1 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7)","protein_coding" "GSVIVT01004814001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01004817001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01004839001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01004861001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01004958001","No alias","Vitis vinifera","9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7 (NAD7)","protein_coding" "GSVIVT01004966001","No alias","Vitis vinifera","9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7 (NAD7)","protein_coding" "GSVIVT01005029001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01005038001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure RECA homolog 3 (RECA3)","protein_coding" "GSVIVT01005041001","No alias","Vitis vinifera","17.4.1 hormone metabolism.cytokinin.synthesis-degradation It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase/dehydrogenase 1 (CKX1)","protein_coding" "GSVIVT01005090001","No alias","Vitis vinifera","30.5 signalling.G-proteins encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It","protein_coding" "GSVIVT01005166001","No alias","Vitis vinifera","29.3.4.3 protein.targeting.secretory pathway.vacuole Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death. gamma vacuolar processing enzyme (GAMMA-VPE)","protein_coding" "GSVIVT01005211001","No alias","Vitis vinifera","30.2.19 signalling.receptor kinases.legume-lectin Concanavalin A-like lectin protein kinase family protein","protein_coding" "GSVIVT01005233001","No alias","Vitis vinifera","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner. myosin 2 (MYA2)","protein_coding" "GSVIVT01005266001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01005281001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog A5E (RABA5E)","protein_coding" "GSVIVT01005287001","No alias","Vitis vinifera","29.1.22 protein.aa activation.asparagine-tRNA ligase Encodes an asparaginyl-tRNA synthetase. asparaginyl-tRNA synthetase 2 (NS2)","protein_coding" "GSVIVT01005316001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01005320001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01005375001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01005596001","No alias","Vitis vinifera","6.4 gluconeogenesis / glyoxylate cycle.PEPCK Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent). phosphoenolpyruvate carboxykinase 1 (PCK1)","protein_coding" "GSVIVT01005613001","No alias","Vitis vinifera","12.4 N-metabolism.misc Aldolase-type TIM barrel family protein","protein_coding" "GSVIVT01005722001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01005757001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of TAP subfamily transporter associated with antigen processing protein 1 (TAP1)","protein_coding" "GSVIVT01005924001","No alias","Vitis vinifera","29.4.1 protein.postranslational modification.kinase Encodes a member of the cdc2+ family of protein kinases MHK. Similar to the mak genes of rats. mak encodes a protein kinase that may play a role in spermatogenesis. MHK","protein_coding" "GSVIVT01005935001","No alias","Vitis vinifera","31.1 cell.organisation Kinesin that binds cyclin-dependent kinase CDKA1 as homodimer or as heterodimer with KCA1 kinesin like protein for actin based chloroplast movement 2 (KAC2)","protein_coding" "GSVIVT01005987001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01006004001","No alias","Vitis vinifera","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes an novel myosin isoform. myosin-like protein XIF (XIF)","protein_coding" "GSVIVT01006035001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation Nuclear encoded protein consists of the five domains conserved in EF-G proteins, with two GTP-binding sites in the first domain, and an additional transit peptide at the N-terminus. Localized in chloroplasts. Point mutation results in a delay in the onset of germination. At early developmental stage embryos still contain undifferentiated proplastids. The greening of cotyledons is severely impaired in light-grown mutant sco1 seedlings, whereas the following true leaves develop normally as in wild-type plants. SNOWY COTYLEDON 1 (SCO1)","protein_coding" "GSVIVT01006061001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01006063001","No alias","Vitis vinifera","30.2.10 signalling.receptor kinases.leucine rich repeat X Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. BAK1-interacting receptor-like kinase 1 (BIR1)","protein_coding" "GSVIVT01006077001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01006150001","No alias","Vitis vinifera","17.4.1 hormone metabolism.cytokinin.synthesis-degradation It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 3 (CKX3)","protein_coding" "GSVIVT01006160001","No alias","Vitis vinifera","29.1.22 protein.aa activation.asparagine-tRNA ligase Encodes an asparaginyl-tRNA synthetase. asparaginyl-tRNA synthetase 2 (NS2)","protein_coding" "GSVIVT01006166001","No alias","Vitis vinifera","6.4 gluconeogenesis / glyoxylate cycle.PEPCK Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent). phosphoenolpyruvate carboxykinase 1 (PCK1)","protein_coding" "GSVIVT01006220001","No alias","Vitis vinifera","9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7 (NAD7)","protein_coding" "GSVIVT01006222001","No alias","Vitis vinifera","9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear NADH dehydrogenase subunit 7 NADH dehydrogenase subunit 7 (NAD7)","protein_coding" "GSVIVT01006243001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01006315001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01006317001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01006339001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "GSVIVT01006397001","No alias","Vitis vinifera","30.2.1 signalling.receptor kinases.leucine rich repeat I Protein kinase superfamily protein","protein_coding" "GSVIVT01006471001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI HAESA-like 2 (HSL2)","protein_coding" "GSVIVT01006472001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI HAESA-like 2 (HSL2)","protein_coding" "GSVIVT01006501001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII STRUBBELIG-receptor family 8 (SRF8)","protein_coding" "GSVIVT01006502001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01006524001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01006611001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01006683001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01006767001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "GSVIVT01006778001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. SOS3-interacting protein 3 (SIP3)","protein_coding" "GSVIVT01006926001","No alias","Vitis vinifera","17.3.1.2.99 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other squalene epoxidase 3 (SQE3)","protein_coding" "GSVIVT01006942001","No alias","Vitis vinifera","30.2.5 signalling.receptor kinases.leucine rich repeat V STRUBBELIG-receptor family 1 (SRF1)","protein_coding" "GSVIVT01006975001","No alias","Vitis vinifera","30.5 signalling.G-proteins member of RAB gene family RAB GTPase homolog B1C (RABB1C)","protein_coding" "GSVIVT01007026001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01007029001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01007141001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01007143001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01007144001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01007146001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01007165001","No alias","Vitis vinifera","27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower growth-regulating factor 1 (GRF1)","protein_coding" "GSVIVT01007238001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01007278001","No alias","Vitis vinifera","17.3.1.2.99 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other squalene epoxidase 3 (SQE3)","protein_coding" "GSVIVT01007336001","No alias","Vitis vinifera","31.1 cell.organisation Encodes a kinesin-like motor protein heavy chain. Loss of function mutations have reduced fertility and are defective in spindle formation in male meiosis. kinesin 1 (ATK1)","protein_coding" "GSVIVT01007345001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Encodes a member of a novel gene family with homology to known proteins involved in hydroxylation and oxidation of an aromatic ring. CTF2A","protein_coding" "GSVIVT01007370001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01007407001","No alias","Vitis vinifera","28.2 DNA.repair Encodes the Arabidopsis homolog of MSH4, a meiosis-specific member of the MutS-homolog family of genes. It is expressed only in floral tissues and only during early meiotic prophase I, preceding the synapsis of homologous chromosomes. It is involved in the early steps of recombination. MUTS-like protein 4 (MSH4)","protein_coding" "GSVIVT01007446001","No alias","Vitis vinifera","30.6 signalling.MAP kinases member of MEKK subfamily mitogen-activated protein kinase kinase kinase 5 (MAPKKK5)","protein_coding" "GSVIVT01007478001","No alias","Vitis vinifera","29.4 protein.postranslational modification CDPK-related kinase CDPK-related kinase (CRK)","protein_coding" "GSVIVT01007586001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "GSVIVT01007619001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01007637001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01007638001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation RAB GTPase homolog E1B (RABE1b)","protein_coding" "GSVIVT01007643001","No alias","Vitis vinifera","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01007665001","No alias","Vitis vinifera","27.1 RNA.processing P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01007689001","No alias","Vitis vinifera","31.2 cell.division ATPase, AAA-type, CDC48 protein","protein_coding" "GSVIVT01007706001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01007713001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01007735001","No alias","Vitis vinifera","18.4.5 Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK) Encodes a protein with pantothenate kinase activity. pantothenate kinase 2 (PANK2)","protein_coding" "GSVIVT01007752001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01007770001","No alias","Vitis vinifera","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01007804001","No alias","Vitis vinifera","30.5 signalling.G-proteins A member of ROP GTPase gene family. RAC-like 10 (RAC10)","protein_coding" "GSVIVT01007841001","No alias","Vitis vinifera","29.2.2 protein.synthesis.ribosome biogenesis Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. Arabidopsis thaliana protein kinase 19 (ATPK19)","protein_coding" "GSVIVT01007875001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase Encodes a predicted protein with 30% identity with MER3/RCK. U5 small nuclear ribonucleoprotein helicase","protein_coding" "GSVIVT01007880001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01007910001","No alias","Vitis vinifera","10.1.4 cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD) UDP-glucose 6-dehydrogenase family protein","protein_coding" "GSVIVT01007933001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "GSVIVT01007934001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "GSVIVT01007956001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence. Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. IMPAIRED IN BABA-INDUCED STERILITY 1 (IBS1)","protein_coding" "GSVIVT01008040001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ABC2 homolog 6 (ATH6)","protein_coding" "GSVIVT01008042001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ATP-binding cassette A2 (ABCA2)","protein_coding" "GSVIVT01008070001","No alias","Vitis vinifera","30.2.13 signalling.receptor kinases.leucine rich repeat XIII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01008088001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01008121001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2 (TAP2)","protein_coding" "GSVIVT01008151001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure nucleic acid bindingATP-dependent helicasesATP bindinghelicasesATP-dependent helicases","protein_coding" "GSVIVT01008184001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a serine/threonine protein kinase. serine/threonine protein kinase 3 (PK3)","protein_coding" "GSVIVT01008186001","No alias","Vitis vinifera","23.3.2.2 nucleotide metabolism.salvage.nucleoside kinases.uridine kinase Phosphoribulokinase / Uridine kinase family","protein_coding" "GSVIVT01008201001","No alias","Vitis vinifera","35.2 not assigned.unknown Encodes a chloroplast-localized protein that modulates cytoplasmic Ca2+ concentration and is crucial for proper stomatal regulation in response to elevations of external Ca2+. calcium sensing receptor (CaS)","protein_coding" "GSVIVT01008209001","No alias","Vitis vinifera","30.2.25 signalling.receptor kinases.wall associated kinase wall-associated kinase like wall associated kinase-like 1 (WAKL1)","protein_coding" "GSVIVT01008212001","No alias","Vitis vinifera","30.2.25 signalling.receptor kinases.wall associated kinase Wall-associated kinase family protein","protein_coding" "GSVIVT01008214001","No alias","Vitis vinifera","30.2.25 signalling.receptor kinases.wall associated kinase wall-associated kinase like wall associated kinase-like 2 (WAKL2)","protein_coding" "GSVIVT01008217001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01008218001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01008235001","No alias","Vitis vinifera","28.2 DNA.repair Encodes a DNA mismatch repair homolog of human MutS gene, MSH6. MSH2 is involved in maintaining genome stability and repressing recombination of mismatched heteroduplexes.There are four MutS genes in Arabidopsis, MSH2, MSH3, MSH6, and MSH7, which all act as heterodimers and bind to 51-mer duplexes. MSH2 has different binding specificity to different mismatches in combination with MSH3, MSH6, or MSH7. MUTS homolog 2 (MSH2)","protein_coding" "GSVIVT01008328001","No alias","Vitis vinifera","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "GSVIVT01008333001","No alias","Vitis vinifera","31.1 cell.organisation Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects seedling lethal. HINKEL (HIK)","protein_coding" "GSVIVT01008356001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01008357001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01008359001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01008363001","No alias","Vitis vinifera","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01008372001","No alias","Vitis vinifera","31.2 cell.division cyclin-dependent kinase D13 (CDKD13)","protein_coding" "GSVIVT01008378001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01008382001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01008386001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01008408001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling. MAP kinase 9 (MPK9)","protein_coding" "GSVIVT01008419001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog A6B (RABA6b)","protein_coding" "GSVIVT01008432001","No alias","Vitis vinifera","30.2.25 signalling.receptor kinases.wall associated kinase Wall-associated kinase family protein","protein_coding" "GSVIVT01008434001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01008436001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01008437001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01008451001","No alias","Vitis vinifera","35.2 not assigned.unknown Encodes a putative oxidoreductase/electron carrier detected in the chloroplast stroma that is essential to ensure a correct electron flow through the photosynthetic chain and, hence, photosynthesis efficiency and normal growth. Mutations in the Col-0 allele result in pale green pigmentation and defective growth. FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "GSVIVT01008472001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown. receptor-like kinase 902 (RLK902)","protein_coding" "GSVIVT01008473001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01008476001","No alias","Vitis vinifera","30.6 signalling.MAP kinases member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3. MAP kinase kinase 9 (MKK9)","protein_coding" "GSVIVT01008495001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01008510001","No alias","Vitis vinifera","13.1.2.3.22 amino acid metabolism.synthesis.glutamate family.arginine.arginosuccinate synthase arginosuccinate synthase family","protein_coding" "GSVIVT01008517001","No alias","Vitis vinifera","23.3.1.3 nucleotide metabolism.salvage.phosphoribosyltransferases.upp Encodes a protein that appears to possess both uridine kinase and uracil phosphoribosyltransferase activities. uridine kinase/uracil phosphoribosyltransferase 1 (UK/UPRT1)","protein_coding" "GSVIVT01008550001","No alias","Vitis vinifera","13.1.4.1.1 amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1 (CSR1)","protein_coding" "GSVIVT01008582001","No alias","Vitis vinifera","35.2 not assigned.unknown Encodes RMI1. Suppresses somatic crossovers. Essential for resolution of meiotic recombination intermediates. RECQ MEDIATED INSTABILITY 1 (RMI1)","protein_coding" "GSVIVT01008589001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01008613001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01008621001","No alias","Vitis vinifera","11.8.1.2 lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. long chain base2 (LCB2)","protein_coding" "GSVIVT01008636001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01008654001","No alias","Vitis vinifera","29.1.14 protein.aa activation.glycine-tRNA ligase glycyl-tRNA synthetase / glycine--tRNA ligase","protein_coding" "GSVIVT01008686001","No alias","Vitis vinifera","29.5.7 protein.degradation.metalloprotease encodes an FTSH protease that is localized to the chloroplast. Involved in the D1 repair cycle of Photosystem II. FtsH1 and FtsH5 are interchangeable in thylakoid membranes. FTSH protease 1 (FTSH1)","protein_coding" "GSVIVT01008708001","No alias","Vitis vinifera","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01008747001","No alias","Vitis vinifera","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 29 (CPK29)","protein_coding" "GSVIVT01008749001","No alias","Vitis vinifera","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 29 (CPK29)","protein_coding" "GSVIVT01008760001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "GSVIVT01008803001","No alias","Vitis vinifera","29.4.1.56 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "GSVIVT01008813001","No alias","Vitis vinifera","29.3.3 protein.targeting.chloroplast Encodes a component of the thylakoid-localized Sec system involved in the translocation of cytoplasmic proteins into plastid. Loss-of-function mutations result in arrest at the globular stage and embryo lethality. Preprotein translocase SecA family protein","protein_coding" "GSVIVT01008825001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure embryo defective 1968 (EMB1968)","protein_coding" "GSVIVT01008841001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01008843001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01008900001","No alias","Vitis vinifera","16.2 secondary metabolism.phenylpropanoids Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "GSVIVT01008926001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a predicted protein kinase based on sequence similarity. putative protein kinase 1 (PPK1)","protein_coding" "GSVIVT01008938001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01008951001","No alias","Vitis vinifera","29.6 protein.folding Co-chaperone GrpE family protein","protein_coding" "GSVIVT01008968001","No alias","Vitis vinifera","13.1.6.2 amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine AGD2-like defense response protein 1 (ALD1)","protein_coding" "GSVIVT01008982001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01008990001","No alias","Vitis vinifera","30.5 signalling.G-proteins tRNA modification GTPase, putative","protein_coding" "GSVIVT01008991001","No alias","Vitis vinifera","11.1.1.1 lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.homomeric Enzyme Encodes acetyl-CoA carboxylase. Mutant displays uncoordinated cell divisions which are enhanced by cytokinins. Mutant also has aberrant organization of the apical region in the embryo and abnormal root and shoot development. Essential for very long chain fatty acid elongation. acetyl-CoA carboxylase 1 (ACC1)","protein_coding" "GSVIVT01009074001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01009121001","No alias","Vitis vinifera","4.1.16 glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK) phosphoenolpyruvate carboxylase-related kinase 2 (PEPKR2)","protein_coding" "GSVIVT01009129001","No alias","Vitis vinifera","30.2.26 signalling.receptor kinases.crinkly like Protein kinase superfamily protein","protein_coding" "GSVIVT01009146001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01009178001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01009205001","No alias","Vitis vinifera","31.1 cell.organisation Di-glucose binding protein with Kinesin motor domain","protein_coding" "GSVIVT01009241001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01009284001","No alias","Vitis vinifera","17.5.1.1 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase Encodes an auxin inducible ACC synthase. 1-amino-cyclopropane-1-carboxylate synthase 8 (ACS8)","protein_coding" "GSVIVT01009287001","No alias","Vitis vinifera","17.3.1.2.99 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity. XF1","protein_coding" "GSVIVT01009299001","No alias","Vitis vinifera","27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower growth-regulating factor 1 (GRF1)","protein_coding" "GSVIVT01009305001","No alias","Vitis vinifera","31.1 cell.organisation Encodes a kinesin-like protein. ZCF125","protein_coding" "GSVIVT01009366001","No alias","Vitis vinifera","29.4 protein.postranslational modification casein kinase II catalytic subunit alpha "casein kinase II, alpha chain 2" (CKA2)","protein_coding" "GSVIVT01009369001","No alias","Vitis vinifera","11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein acyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity. acyl-CoA-binding domain 3 (ACBP3)","protein_coding" "GSVIVT01009394001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01009414001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like lectin protein kinase family protein","protein_coding" "GSVIVT01009415001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01009417001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01009418001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-domain-2 5 (SD2-5)","protein_coding" "GSVIVT01009420001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01009421001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01009428001","No alias","Vitis vinifera","13.1.5.1.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase embryo sac development arrest 9 (EDA9)","protein_coding" "GSVIVT01009444001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01009447001","No alias","Vitis vinifera","31.1 cell.organisation encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. FRAGILE FIBER 1 (FRA1)","protein_coding" "GSVIVT01009470001","No alias","Vitis vinifera","1.1.30 PS.lightreaction.state transition Protein kinase superfamily protein","protein_coding" "GSVIVT01009489001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "GSVIVT01009512001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01009513001","No alias","Vitis vinifera","29.1.10 protein.aa activation.methionine-tRNA ligase methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative","protein_coding" "GSVIVT01009575001","No alias","Vitis vinifera","30.6 signalling.MAP kinases member of MEKK subfamily mitogen-activated protein kinase kinase kinase 5 (MAPKKK5)","protein_coding" "GSVIVT01009576001","No alias","Vitis vinifera","20.1 stress.biotic ADR1-like 1 (ADR1-L1)","protein_coding" "GSVIVT01009615001","No alias","Vitis vinifera","30.2.25 signalling.receptor kinases.wall associated kinase Protein kinase superfamily protein","protein_coding" "GSVIVT01009685001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01009739001","No alias","Vitis vinifera","13.1.2.3.21 amino acid metabolism.synthesis.glutamate family.arginine.ornithine carbamoyltransferase ornithine carbamoyltransferase (OTC)","protein_coding" "GSVIVT01009755001","No alias","Vitis vinifera","3.4.2 minor CHO metabolism.myo-inositol.InsP-Kinases Encodes an inositol tetra-/pentaphosphate 2-kinase, involved in the biosynthesis of phytic acid, a regulator of intracellular signaling, a highly abundant animal antinutrient, and a phosphate and mineral storage compound in plant seeds. inositol-pentakisphosphate 2-kinase 1 (IPK1)","protein_coding" "GSVIVT01009766001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Encodes ATMPK1. mitogen-activated protein kinase 1 (ATMPK1)","protein_coding" "GSVIVT01009774001","No alias","Vitis vinifera","29.5.11.20 protein.degradation.ubiquitin.proteasom AAA-type ATPase family protein","protein_coding" "GSVIVT01009778001","No alias","Vitis vinifera","30.5 signalling.G-proteins GTP-binding protein, HflX","protein_coding" "GSVIVT01009786001","No alias","Vitis vinifera","17.4.1 hormone metabolism.cytokinin.synthesis-degradation This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 5 (CKX5)","protein_coding" "GSVIVT01009800001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis. EMBRYO DEFECTIVE 269 (EMB269)","protein_coding" "GSVIVT01009828001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01009899001","No alias","Vitis vinifera","2.2.1.4 major CHO metabolism.degradation.sucrose.hexokinase Encodes a putative hexokinase. hexokinase 3 (HXK3)","protein_coding" "GSVIVT01009931001","No alias","Vitis vinifera","20.2.1 stress.abiotic.heat encodes an ortholog of GRP94, an ER-resident HSP90-like protein and is involved in regulation of meristem size and organization. Single and double mutant analyses suggest that SHD may be required for the correct folding and/or complex formation of CLV proteins. Lines carrying recessive mutations in this locus exhibits expanded shoot meristems, disorganized root meristems, and defective pollen tube elongation. Transcript is detected in all tissues examined and is not induced by heat. Endoplasmin supports the protein secretory pathway and has a role in proliferating tissues. SHEPHERD (SHD)","protein_coding" "GSVIVT01009935001","No alias","Vitis vinifera","29.2.2.2.1 protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases DEA(D/H)-box RNA helicase family protein","protein_coding" "GSVIVT01009938001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01009946001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 13 (PGP13)","protein_coding" "GSVIVT01009947001","No alias","Vitis vinifera","30.5 signalling.G-proteins Belongs to the plant-specific ROP group of Rho GTPases localized to the plasma membrane of tips of root hairs involved in polar growth control. RAC-like GTP binding protein 5 (ARAC5)","protein_coding" "GSVIVT01009950001","No alias","Vitis vinifera","29.4.1.56 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "GSVIVT01009979001","No alias","Vitis vinifera","30.2.22 signalling.receptor kinases.proline extensin like Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "GSVIVT01009983001","No alias","Vitis vinifera","29.2.2.2.1 protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases hydrolases, acting on acid anhydrides, in phosphorus-containing anhydridesATP-dependent helicasesnucleic acid bindingATP bindingRNA bindinghelicases","protein_coding" "GSVIVT01009987001","No alias","Vitis vinifera","30.5 signalling.G-proteins ras-related small GTPase RAB GTPASE HOMOLOG B18 (RAB18)","protein_coding" "GSVIVT01009989001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc YUC10","protein_coding" "GSVIVT01009990001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc YUC10","protein_coding" "GSVIVT01009998001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc YUC10","protein_coding" "GSVIVT01010052001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01010073001","No alias","Vitis vinifera","33.99 development.unspecified Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. BARELY ANY MERISTEM 3 (BAM3)","protein_coding" "GSVIVT01010078001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01010120001","No alias","Vitis vinifera","20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. CR88","protein_coding" "GSVIVT01010141001","No alias","Vitis vinifera","18.5.2.8.1 Co-factor and vitamine metabolism.folate & vitamine K.vitamine K.2-phytyl-1,4-naphthoquinone methyltransferase.PHYLLO Homologous to the four eubacterial men genes involved in menanoquinone biosynthesis. Studies of mutants defective in this gene demonstrated its involvement in phylloquinone biosynthesis in Arabidopsis. magnesium ion bindingthiamin pyrophosphate bindinghydro-lyasescatalytics2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthases","protein_coding" "GSVIVT01010149001","No alias","Vitis vinifera","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01010159001","No alias","Vitis vinifera","30.2.2 signalling.receptor kinases.leucine rich repeat II NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). NSP-interacting kinase 1 (NIK1)","protein_coding" "GSVIVT01010166001","No alias","Vitis vinifera","23.3.2.2 nucleotide metabolism.salvage.nucleoside kinases.uridine kinase Phosphoribulokinase / Uridine kinase family","protein_coding" "GSVIVT01010171001","No alias","Vitis vinifera","7.1.3 OPP.oxidative PP.6-phosphogluconate dehydrogenase 6-phosphogluconate dehydrogenase family protein","protein_coding" "GSVIVT01010251001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01010254001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01010257001","No alias","Vitis vinifera","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases DEA(D/H)-box RNA helicase family protein","protein_coding" "GSVIVT01010258001","No alias","Vitis vinifera","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases DEA(D/H)-box RNA helicase family protein","protein_coding" "GSVIVT01010282001","No alias","Vitis vinifera","28.99 DNA.unspecified ETL1","protein_coding" "GSVIVT01010326001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "GSVIVT01010338001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01010340001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. EMBRYO DEFECTIVE 2421 (EMB2421)","protein_coding" "GSVIVT01010342001","No alias","Vitis vinifera","28.99 DNA.unspecified DEAD/DEAH box RNA helicase family protein","protein_coding" "GSVIVT01010343001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type AAA-type ATPase - Over 90% homologous to CDC48a cell division cycle 48C (CDC48C)","protein_coding" "GSVIVT01010357001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type cytochrome BC1 synthesis (BCS1)","protein_coding" "GSVIVT01010362001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase RNA helicase family protein","protein_coding" "GSVIVT01010368001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01010370001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01010371001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01010372001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01010373001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01010376001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01010436001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01010437001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01010446001","No alias","Vitis vinifera","33.99 development.unspecified embryo defective 1688 (emb1688)","protein_coding" "GSVIVT01010507001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01010526001","No alias","Vitis vinifera","11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids dihydrosphingosine phosphate lyase (DPL1)","protein_coding" "GSVIVT01010538001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01010632001","No alias","Vitis vinifera","29.1.9 protein.aa activation.valine-tRNA ligase Required for proper proliferation of basal cells. TWIN 2 (TWN2)","protein_coding" "GSVIVT01010634001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 8 (NAP8)","protein_coding" "GSVIVT01010636001","No alias","Vitis vinifera","4.1.16 glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1)","protein_coding" "GSVIVT01010648001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01010700001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01010703001","No alias","Vitis vinifera","29.1.9 protein.aa activation.valine-tRNA ligase embryo defective 2247 (EMB2247)","protein_coding" "GSVIVT01010758001","No alias","Vitis vinifera","29.4 protein.postranslational modification GCN2","protein_coding" "GSVIVT01010769001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure embryo defective 1507 (emb1507)","protein_coding" "GSVIVT01010814001","No alias","Vitis vinifera","20.1 stress.biotic Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. RECOGNITION OF PERONOSPORA PARASITICA 8 (RPP8)","protein_coding" "GSVIVT01010830001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01010916001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01010923001","No alias","Vitis vinifera","29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase class IIc family protein","protein_coding" "GSVIVT01010948001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase that negatively regulates the entry into mitosis. WEE1 kinase homolog (WEE1)","protein_coding" "GSVIVT01010954001","No alias","Vitis vinifera","18.4.9 Co-factor and vitamine metabolism.pantothenate.dephospho-CoA kinase (DPCK) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA. ATCOAE","protein_coding" "GSVIVT01010963001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type Encodes an apparent ATPase similar to yeast and human protein required for peroxisomal biogenesis. May facilitate recycling of PEX5, the peroxisomal matrix protein receptor, and thereby promote peroxisomal matrix protein import. peroxin 6 (PEX6)","protein_coding" "GSVIVT01011005001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc YUC10","protein_coding" "GSVIVT01011045001","No alias","Vitis vinifera","29.4.1.56 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI Protein kinase family protein","protein_coding" "GSVIVT01011046001","No alias","Vitis vinifera","30.2.23 signalling.receptor kinases.RKF3 like receptor-like serine/threonine kinase (RKF3) receptor-like kinase in in flowers 3 (RKF3)","protein_coding" "GSVIVT01011073001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "GSVIVT01011078001","No alias","Vitis vinifera","30.5 signalling.G-proteins GTP-binding family protein","protein_coding" "GSVIVT01011085001","No alias","Vitis vinifera","30.5 signalling.G-proteins A new plant-specific member of the dynamin superfamily defines a new protein class within the dynamin superfamily of membrane remodeling GTPases that regulates organization of the thylakoid network in plants. Targeted to chloroplasts and associated with thylakoid and envelope membranes as punctate structures. Knockout mutants have abnormalities in chloroplast and thylakoid morphology, including disorganized grana stacks and alterations in the relative proportions of grana and stroma thylakoids. Overexpression of FZL-GFP also conferred defects in thylakoid organization. FZO-like (FZL)","protein_coding" "GSVIVT01011087001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes a calcium binding GTPases that is localized to the mitochondrion and is involved in salt stress response. MIRO-related GTP-ase 2 (MIRO2)","protein_coding" "GSVIVT01011125001","No alias","Vitis vinifera","28.2 DNA.repair UV damage and heat induce a common stress response in plants that leads to tissue death and reduced chloroplast function. The UVH6 product is suggested to be a negative regulator of this response. ULTRAVIOLET HYPERSENSITIVE 6 (UVH6)","protein_coding" "GSVIVT01011167001","No alias","Vitis vinifera","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 13 (CPK13)","protein_coding" "GSVIVT01011193001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01011251001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01011255001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS. MATERNAL EFFECT EMBRYO ARREST 5 (MEE5)","protein_coding" "GSVIVT01011287001","No alias","Vitis vinifera","16.1.2.6 secondary metabolism.isoprenoids.mevalonate pathway.mevalonate diphosphate decarboxylase GHMP kinase family protein","protein_coding" "GSVIVT01011326001","No alias","Vitis vinifera","30.5 signalling.G-proteins Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding" "GSVIVT01011357001","No alias","Vitis vinifera","30.5 signalling.G-proteins Small GTP-binding protein","protein_coding" "GSVIVT01011373001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01011376001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "GSVIVT01011381001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01011397001","No alias","Vitis vinifera","29.5.7 protein.degradation.metalloprotease Encodes an FtsH protease that is localized to the chloroplast. AtFtsH6 is involved in the degradation of both Lhcb3 and Lhcb1 during senescence and high-light acclimation. FTSH protease 6 (FTSH6)","protein_coding" "GSVIVT01011408001","No alias","Vitis vinifera","31.2 cell.division member of SMC subfamily structural maintenance of chromosome 3 (SMC3)","protein_coding" "GSVIVT01011431001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01011450001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01011467001","No alias","Vitis vinifera","29.4.1 protein.postranslational modification.kinase encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase SNF1 kinase homolog 10 (KIN10)","protein_coding" "GSVIVT01011471001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a cyclin-dependent kinase-like protein with a ser/thr protein kinase domain and an N-terminal myristoylation sequence. Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. IMPAIRED IN BABA-INDUCED STERILITY 1 (IBS1)","protein_coding" "GSVIVT01011496001","No alias","Vitis vinifera","20.2.1 stress.abiotic.heat Encodes a chloroplast-targeted Hsp101 homologue. Functions as a molecular chaperone involved in plastid differentiation mediating internal thylakoid membrane formation and conferring thermotolerance to chloroplasts during heat stress. APG6 is constitutively expressed in the root tips, the organ boundary region, the reproductive tissues of mature plants where plastids exist as proplastids, and slightly in the stems and leaves. APG6 expression is upregulated in response to heat shock in various organs, but not in response to other abiotic stresses. Apg6 mutants have a pale-green phenotype. casein lytic proteinase B3 (CLPB3)","protein_coding" "GSVIVT01011507001","No alias","Vitis vinifera","10.1.4 cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD) UDP-glucose 6-dehydrogenase family protein","protein_coding" "GSVIVT01011527001","No alias","Vitis vinifera","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases STRESS RESPONSE SUPPRESSOR 1 (STRS1)","protein_coding" "GSVIVT01011531001","No alias","Vitis vinifera","29.3.3 protein.targeting.chloroplast Outer membrane GTPase protein that may function in import of nuclear encoded proteins into the chloroplast. Phosphorylation of the G-domains regulate translocon assembly. translocon at the outer envelope membrane of chloroplasts 34 (TOC34)","protein_coding" "GSVIVT01011555001","No alias","Vitis vinifera","1.3.12 PS.calvin cycle.PRK phosphoribulokinase (PRK)","protein_coding" "GSVIVT01011564001","No alias","Vitis vinifera","13.1.1.1.1 amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase glutamate decarboxylase 4 (GAD4)","protein_coding" "GSVIVT01011565001","No alias","Vitis vinifera","13.1.1.1.1 amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase Encodes one of two isoforms of glutamate decarboxylase. glutamate decarboxylase (GAD)","protein_coding" "GSVIVT01011620001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like lectin protein kinase family protein","protein_coding" "GSVIVT01011654001","No alias","Vitis vinifera","26.17 misc.dynamin Encodes a dynamin-like protein that is involved in mitochondrial morphogenesis and pollen development. Protein is localized as speckles in the cytoplasm, partially co-localizes with mitochondrial markers, cell plate of dividing cells, and the tip of root hairs, root cap cells, and expanding part of trichoblasts. DYNAMIN-like 1C (DL1C)","protein_coding" "GSVIVT01011677001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown. receptor-like kinase 902 (RLK902)","protein_coding" "GSVIVT01011746001","No alias","Vitis vinifera","23.3.2.2 nucleotide metabolism.salvage.nucleoside kinases.uridine kinase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01011749001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling. MAP kinase 9 (MPK9)","protein_coding" "GSVIVT01011753001","No alias","Vitis vinifera","28.99 DNA.unspecified DEAD/DEAH box RNA helicase family protein","protein_coding" "GSVIVT01011797001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01011806001","No alias","Vitis vinifera","31.3 cell.cycle Origin Recognition Complex subunit 4. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with all ORC subunits except ORC1b. origin recognition complex subunit 4 (ORC4)","protein_coding" "GSVIVT01011809001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA helicase family protein","protein_coding" "GSVIVT01011816001","No alias","Vitis vinifera","30.2.15 signalling.receptor kinases.thaumatin like putative receptor serine/threonine kinase PR5K (PR5K) mRNA, PR5-like receptor kinase","protein_coding" "GSVIVT01011849001","No alias","Vitis vinifera","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "GSVIVT01011854001","No alias","Vitis vinifera","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "GSVIVT01011857001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "GSVIVT01011871001","No alias","Vitis vinifera","29.1.18 protein.aa activation.glutamine-tRNA ligase ovule abortion 9 (OVA9)","protein_coding" "GSVIVT01011916001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01011952001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01011981001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "GSVIVT01012031001","No alias","Vitis vinifera","30.6 signalling.MAP kinases MAP3K epsilon protein kinase 1 is functionally redundant with MAP3Ke2. Required for pollen development but not essential. map3ke1map3ke2 double-mutant pollen grains develop plasma membrane irregularities following pollen mitosis I. Localized primarily in the plasma membrane. Expressed in leaf trichomes, root columella cells and developing ovules. mitogen-activated protein kinase kinase kinase 7 (MAPKKK7)","protein_coding" "GSVIVT01012038001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01012098001","No alias","Vitis vinifera","29.6 protein.folding embryo defective 3007 (EMB3007)","protein_coding" "GSVIVT01012107001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01012117001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure chromatin remodeling 4 (CHR4)","protein_coding" "GSVIVT01012157001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01012158001","No alias","Vitis vinifera","35.1 not assigned.no ontology Molybdenum cofactor sulfurase family protein","protein_coding" "GSVIVT01012164001","No alias","Vitis vinifera","29.3.4.3 protein.targeting.secretory pathway.vacuole VACUOLAR SORTING RECEPTOR 6 (VSR6)","protein_coding" "GSVIVT01012165001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01012167001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01012168001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01012169001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01012198001","No alias","Vitis vinifera","10.1.4 cell wall.precursor synthesis.UDP-Glc dehydrogenase (UGD) UDP-glucose 6-dehydrogenase family protein","protein_coding" "GSVIVT01012233001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a putative serine/threonine kinase (SIK1). SIK1","protein_coding" "GSVIVT01012272001","No alias","Vitis vinifera","26.17 misc.dynamin involved in trafficking from the trans-Golgi Network to the central vacuole. dynamin-like protein 6 (ADL6)","protein_coding" "GSVIVT01012390001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01012407001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01012421001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01012436001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01012443001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01012446001","No alias","Vitis vinifera","30.2.22 signalling.receptor kinases.proline extensin like Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "GSVIVT01012486001","No alias","Vitis vinifera","29.2.2 protein.synthesis.ribosome biogenesis ATPasesnucleotide bindingATP bindingnucleoside-triphosphatasestranscription factor binding","protein_coding" "GSVIVT01012489001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure DEAD/DEAH box RNA helicase family protein","protein_coding" "GSVIVT01012532001","No alias","Vitis vinifera","26.17 misc.dynamin Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. dynamin-related protein 3A (DRP3A)","protein_coding" "GSVIVT01012536001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "GSVIVT01012618001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01012626001","No alias","Vitis vinifera","35.2 not assigned.unknown Encodes a PPDK regulatory protein that has both protein kinase and protein phosphatase activities towards PPDK (pyruvate orthophosphate dikinase). PPDK regulatory protein (RP1)","protein_coding" "GSVIVT01012632001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01012657001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "GSVIVT01012686001","No alias","Vitis vinifera","29.4 protein.postranslational modification member of MEKK subfamily mitogen-activated protein kinase kinase kinase 15 (MAPKKK15)","protein_coding" "GSVIVT01012697001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Helicase protein with RING/U-box domain","protein_coding" "GSVIVT01012699001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Helicase protein with RING/U-box domain","protein_coding" "GSVIVT01012701001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Helicase protein with RING/U-box domain","protein_coding" "GSVIVT01012730001","No alias","Vitis vinifera","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 21 (CPK21)","protein_coding" "GSVIVT01012762001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01012796001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01012881001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation Encodes a protein with similarity to splicing factor Snu114. Snu114 is thought to be involved in activation of the splicosome. Loss of GFA1 function results in reduced female fertility. Approximately 50% of ovules abort due to defects in the female gametophyte. In mutant gametophytes antipodal cells express egg cell markers suggesting a defect in specification of cell fate.GFA1 is also required to restrict the expression of LIS. MATERNAL EFFECT EMBRYO ARREST 5 (MEE5)","protein_coding" "GSVIVT01012904001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01012956001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type Necessary for sister chromatid cohesion. Acts in synergy with ETG1. CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)","protein_coding" "GSVIVT01012968001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type Necessary for sister chromatid cohesion. Acts in synergy with ETG1. CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)","protein_coding" "GSVIVT01012990001","No alias","Vitis vinifera","29.1.10 protein.aa activation.methionine-tRNA ligase methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative","protein_coding" "GSVIVT01013015001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01013024001","No alias","Vitis vinifera","16.1.2.5 secondary metabolism.isoprenoids.mevalonate pathway.phosphomevalonate kinase GHMP kinase family protein","protein_coding" "GSVIVT01013039001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01013124001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01013125001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 2 (PGP2)","protein_coding" "GSVIVT01013213001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant. RAB6A","protein_coding" "GSVIVT01013218001","No alias","Vitis vinifera","26.17 misc.dynamin At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. DYNAMIN-like 1E (DL1E)","protein_coding" "GSVIVT01013222001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant. RAB6A","protein_coding" "GSVIVT01013247001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase Required for nonsense-mediated mRNA decay. Involved in RNA interference. lba1 mutants has reduced sugar-induced expression of Atb- amylase, is hypersensitive to glucose and abscisic acid and resistant to mannose, and shows early flowering, short day-sensitive growth, and seed germination phenotypes. LOW-LEVEL BETA-AMYLASE 1 (LBA1)","protein_coding" "GSVIVT01013264001","No alias","Vitis vinifera","29.5.5 protein.degradation.serine protease Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins. lon protease 2 (LON2)","protein_coding" "GSVIVT01013291001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type Necessary for sister chromatid cohesion. Acts in synergy with ETG1. CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)","protein_coding" "GSVIVT01013293001","No alias","Vitis vinifera","29.1.22 protein.aa activation.asparagine-tRNA ligase SYNC3","protein_coding" "GSVIVT01013307001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01013310001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01013341001","No alias","Vitis vinifera","30.2.2 signalling.receptor kinases.leucine rich repeat II Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. somatic embryogenesis receptor-like kinase 2 (SERK2)","protein_coding" "GSVIVT01013359001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "GSVIVT01013378001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "GSVIVT01013386001","No alias","Vitis vinifera","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 1 (OPR1)","protein_coding" "GSVIVT01013387001","No alias","Vitis vinifera","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 1 (OPR1)","protein_coding" "GSVIVT01013389001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure RAD3-like DNA-binding helicase protein","protein_coding" "GSVIVT01013402001","No alias","Vitis vinifera","29.4 protein.postranslational modification inositol requiring 1-1 (IRE1-1)","protein_coding" "GSVIVT01013440001","No alias","Vitis vinifera","31.2 cell.division Encodes a cyclin-dependent protein kinase involved in regulation of the G2/M transition of the mitotic cell cycle. Specifically binds to the cyclin CYCD41, expressed in shoot meristem, young leaves and vascular tissue during the G2/M phase. Required for proper organization of the shoot apical meristem and for hormone signaling. cyclin-dependent kinase B21 (CDKB21)","protein_coding" "GSVIVT01013461001","No alias","Vitis vinifera","30.2.21 signalling.receptor kinases.lysine motif Protein kinase superfamily protein","protein_coding" "GSVIVT01013508001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01013512001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01013533001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01013574001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01013575001","No alias","Vitis vinifera","5.2 fermentation.PDC Thiamine pyrophosphate dependent pyruvate decarboxylase family protein","protein_coding" "GSVIVT01013612001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01013614001","No alias","Vitis vinifera","29.3.5 protein.targeting.peroxisomes an AAA-ATPase that is the probable Arabidopsis orthologue of one of the AAA-ATPases involved in peroxisome biogenesis in yeasts and mammals. peroxisome 1 (PEX1)","protein_coding" "GSVIVT01013682001","No alias","Vitis vinifera","30.5 signalling.G-proteins The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis. Light Insensitive Period1 (LIP1)","protein_coding" "GSVIVT01013686001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog G3A (RABG3A)","protein_coding" "GSVIVT01013688001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog G3A (RABG3A)","protein_coding" "GSVIVT01013702001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase. RH39 (RH39)","protein_coding" "GSVIVT01013712001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01013739001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01013761001","No alias","Vitis vinifera","18.4.5 Co-factor and vitamine metabolism.pantothenate.pantothenate kinase (PANK) Encodes a protein with pantothenate kinase activity. pantothenate kinase 2 (PANK2)","protein_coding" "GSVIVT01013765001","No alias","Vitis vinifera","29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1E (ARFA1E)","protein_coding" "GSVIVT01013787001","No alias","Vitis vinifera","30.2.2 signalling.receptor kinases.leucine rich repeat II NSP-interacting kinase 3 (NIK3)","protein_coding" "GSVIVT01013796001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01013798001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01013799001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01013806001","No alias","Vitis vinifera","2.2.2.3 major CHO metabolism.degradation.starch.glucan water dikinase Encodes an α-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance. Mutations that eliminate the GWD protein or affect the dikinase domain of the enzyme dramatically reduce both the amount of phosphate in the amylopectin and the rate of starch degradation. Mature leaves of these mutants accumulate amounts of starch up to seven times greater than those in wild-type leaves. NMR analysis of the mutants, suggests that the gene is specifically involved in the phosphorylation of the glucosyl residues of starch at the C6 position. STARCH EXCESS 1 (SEX1)","protein_coding" "GSVIVT01013821001","No alias","Vitis vinifera","29.1.22 protein.aa activation.asparagine-tRNA ligase Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis. NS1","protein_coding" "GSVIVT01013826001","No alias","Vitis vinifera","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01013853001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01013868001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog 1C (RAB1C)","protein_coding" "GSVIVT01013909001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01013986001","No alias","Vitis vinifera","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI member of Myosin-like proteins myosin XI D (XID)","protein_coding" "GSVIVT01014020001","No alias","Vitis vinifera","29.4.1.59 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX U-box domain-containing protein kinase family protein","protein_coding" "GSVIVT01014024001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01014062001","No alias","Vitis vinifera","29.5.5 protein.degradation.serine protease ATP-dependent Clp protease regulatory subunit EARLY RESPONSIVE TO DEHYDRATION 1 (ERD1)","protein_coding" "GSVIVT01014064001","No alias","Vitis vinifera","13.1.2.3.22 amino acid metabolism.synthesis.glutamate family.arginine.arginosuccinate synthase arginosuccinate synthase family","protein_coding" "GSVIVT01014070001","No alias","Vitis vinifera","30.2.13 signalling.receptor kinases.leucine rich repeat XIII Protein kinase superfamily protein","protein_coding" "GSVIVT01014081001","No alias","Vitis vinifera","30.6 signalling.MAP kinases member of MAP Kinase MAP kinase 19 (MPK19)","protein_coding" "GSVIVT01014110001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01014111001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01014117001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01014124001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01014125001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01014140001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01014155001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01014159001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01014161001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01014162001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "GSVIVT01014165001","No alias","Vitis vinifera","30.5 signalling.G-proteins Monomeric G protein. Expressed in the root quiescent center, flowers, and leaf guard cells and hydathodes. SGP1","protein_coding" "GSVIVT01014181001","No alias","Vitis vinifera","30.5 signalling.G-proteins small GTP-binding protein (Rab11)similar to YPT3/RAB11 proteins in yeast and mammals, respectively. YPT3/RAB11 is involved in intracellular protein trafficking. RAB GTPase homolog A1B (RABA1b)","protein_coding" "GSVIVT01014235001","No alias","Vitis vinifera","29.5 protein.degradation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01014250001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog A1F (RABA1f)","protein_coding" "GSVIVT01014274001","No alias","Vitis vinifera","29.6 protein.folding P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01014286001","No alias","Vitis vinifera","13.2.6.2 amino acid metabolism.degradation.aromatic aa.tyrosine encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment Tyrosine transaminase family protein","protein_coding" "GSVIVT01014297001","No alias","Vitis vinifera","29.4 protein.postranslational modification ATMAP4K ALPHA1","protein_coding" "GSVIVT01014328001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01014334001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01014335001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01014341001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type N-ethylmaleimide sensitive factor N-ethylmaleimide sensitive factor (NSF)","protein_coding" "GSVIVT01014369001","No alias","Vitis vinifera","30.5 signalling.G-proteins GTP-binding family protein","protein_coding" "GSVIVT01014385001","No alias","Vitis vinifera","19.99 tetrapyrrole synthesis.unspecified Flavodoxin family protein","protein_coding" "GSVIVT01014470001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins HOPZ-ACTIVATED RESISTANCE 1 (ZAR1)","protein_coding" "GSVIVT01014478001","No alias","Vitis vinifera","29.4 protein.postranslational modification CALLUS EXPRESSION OF RBCS 101 (CES101)","protein_coding" "GSVIVT01014488001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "GSVIVT01014511001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01014513001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01014515001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01014519001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01014531001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01014585001","No alias","Vitis vinifera","31.1 cell.organisation Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity. kinesin 3 (ATK3)","protein_coding" "GSVIVT01014595001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01014596001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01014625001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "GSVIVT01014628001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "GSVIVT01014629001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "GSVIVT01014631001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "GSVIVT01014632001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "GSVIVT01014633001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "GSVIVT01014659001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01014680001","No alias","Vitis vinifera","29.1.3 protein.aa activation.threonine-tRNA ligase Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion. Threonyl-tRNA synthetase","protein_coding" "GSVIVT01014688001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01014711001","No alias","Vitis vinifera","29.4 protein.postranslational modification D6 protein kinase like 2 (D6PKL2)","protein_coding" "GSVIVT01014733001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01014752001","No alias","Vitis vinifera","31.1 cell.organisation kinesin-like protein 1 (KP1)","protein_coding" "GSVIVT01014796001","No alias","Vitis vinifera","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant. XIK","protein_coding" "GSVIVT01014799001","No alias","Vitis vinifera","5.2 fermentation.PDC Thiamine pyrophosphate dependent pyruvate decarboxylase family protein","protein_coding" "GSVIVT01014838001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01014847001","No alias","Vitis vinifera","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01014996001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01015015001","No alias","Vitis vinifera","31.1 cell.organisation Encodes a kinesin TETRASPORE. Required for cytokinesis in pollen. In mutants, all four microspore nuclei remain within the same cytoplasm after meiosis. TETRASPORE (TES)","protein_coding" "GSVIVT01015028001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "GSVIVT01015034001","No alias","Vitis vinifera","29.2.2.2.1 protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01015046001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01015057001","No alias","Vitis vinifera","28.99 DNA.unspecified Encodes RECQ3, an ATP-dependent helicase. RecQl3","protein_coding" "GSVIVT01015093001","No alias","Vitis vinifera","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes a 12-oxophytodienoate reductase that is required for jasmonate biosynthesis. Mutants are male sterile and defective in pollen dehiscence. Shows activity towards 2,4,6-trinitrotoluene. oxophytodienoate-reductase 3 (OPR3)","protein_coding" "GSVIVT01015095001","No alias","Vitis vinifera","27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 5 (GRF5)","protein_coding" "GSVIVT01015105001","No alias","Vitis vinifera","11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases. acyl-CoA-binding protein 6 (ACBP6)","protein_coding" "GSVIVT01015155001","No alias","Vitis vinifera","29.4.1 protein.postranslational modification.kinase encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2. MAP kinase kinase 2 (MKK2)","protein_coding" "GSVIVT01015159001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01015167001","No alias","Vitis vinifera","20.1 stress.biotic Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2. RESISTANT TO P. SYRINGAE 2 (RPS2)","protein_coding" "GSVIVT01015173001","No alias","Vitis vinifera","29.2.3 protein.synthesis.initiation member of eIF4A - eukaryotic initiation factor 4A eif4a-2 (EIF4A-2)","protein_coding" "GSVIVT01015176001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. casein kinase 1-like protein 2 (CKL2)","protein_coding" "GSVIVT01015188001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure recA DNA recombination family protein","protein_coding" "GSVIVT01015194001","No alias","Vitis vinifera","17.4.1 hormone metabolism.cytokinin.synthesis-degradation It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 3 (CKX3)","protein_coding" "GSVIVT01015226001","No alias","Vitis vinifera","30.2.22 signalling.receptor kinases.proline extensin like Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "GSVIVT01015239001","No alias","Vitis vinifera","17.5.1.1 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7)","protein_coding" "GSVIVT01015252001","No alias","Vitis vinifera","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase Encodes a prokaryotic-type plastidic aspartate aminotransferase with glutamate/aspartate-prephenate aminotransferase (PAT) activity.","protein_coding" "GSVIVT01015254001","No alias","Vitis vinifera","29.1.22 protein.aa activation.asparagine-tRNA ligase Encodes a putative cytosolic asparaginyl-tRNA synthetase. SYNC1","protein_coding" "GSVIVT01015283001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro. MAP kinase kinase 6 (MKK6)","protein_coding" "GSVIVT01015286001","No alias","Vitis vinifera","29.1.19 protein.aa activation.arginine-tRNA ligase embryo defective 1027 (emb1027)","protein_coding" "GSVIVT01015297001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01015298001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01015306001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "GSVIVT01015311001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01015342001","No alias","Vitis vinifera","29.4 protein.postranslational modification casein kinase I-like 3 (ckl3)","protein_coding" "GSVIVT01015359001","No alias","Vitis vinifera","30.5 signalling.G-proteins A member of ROP GTPase gene family. RHO-related protein from plants 9 (ROP9)","protein_coding" "GSVIVT01015360001","No alias","Vitis vinifera","31.3 cell.cycle Encodes a CDK-activating kinase that regulates root initial cell differentiation. Phosphorylates CDKD2 and CDKD3, but not CDKD1. Controls CDK activities and basal transcription. CDK-activating kinase 1AT (CAK1AT)","protein_coding" "GSVIVT01015367001","No alias","Vitis vinifera","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves. aspartate aminotransferase 3 (ASP3)","protein_coding" "GSVIVT01015388001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc YUCCA2 (YUC2)","protein_coding" "GSVIVT01015391001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01015394001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01015398001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes Ara7. ARA7","protein_coding" "GSVIVT01015403001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "GSVIVT01015407001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01015456001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 4 (PDR4)","protein_coding" "GSVIVT01015460001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01015461001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01015482001","No alias","Vitis vinifera","30.5 signalling.G-proteins A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. RAS-related GTP-binding nuclear protein 2 (RAN2)","protein_coding" "GSVIVT01015489001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc Protein kinase superfamily protein","protein_coding" "GSVIVT01015496001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01015515001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01015549001","No alias","Vitis vinifera","29.4 protein.postranslational modification encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition SALT OVERLY SENSITIVE 2 (SOS2)","protein_coding" "GSVIVT01015660001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding" "GSVIVT01015707001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01015710001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01015738001","No alias","Vitis vinifera","29.1.7 protein.aa activation.alanine-tRNA ligase Alanyl-tRNA synthetase (ALATS)","protein_coding" "GSVIVT01015767001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. white-brown complex homolog protein 11 (WBC11)","protein_coding" "GSVIVT01015790001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01015792001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01015801001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01015803001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases member of Reticuline oxidase-like family ATSEC1A","protein_coding" "GSVIVT01015808001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01015821001","No alias","Vitis vinifera","13.1.1.1.2 amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase Genetically redundant with POP3mediates pollen tube guidance. Double mutants are self sterile gamma-aminobutyrate transaminase subunit precursor nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense. POLLEN-PISTIL INCOMPATIBILITY 2 (POP2)","protein_coding" "GSVIVT01015824001","No alias","Vitis vinifera","13.1.1.1.2 amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase Genetically redundant with POP3mediates pollen tube guidance. Double mutants are self sterile gamma-aminobutyrate transaminase subunit precursor nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense. POLLEN-PISTIL INCOMPATIBILITY 2 (POP2)","protein_coding" "GSVIVT01015841001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01015905001","No alias","Vitis vinifera","30.5 signalling.G-proteins AAA-type ATPase family protein","protein_coding" "GSVIVT01015960001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 11 (MRP11)","protein_coding" "GSVIVT01015977001","No alias","Vitis vinifera","29.4.1.61 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X Protein kinase superfamily protein","protein_coding" "GSVIVT01016062001","No alias","Vitis vinifera","1.3.13 PS.calvin cycle.rubisco interacting P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01016074001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01016091001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01016115001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. MAP kinase kinase 5 (MKK5)","protein_coding" "GSVIVT01016122001","No alias","Vitis vinifera","13.1.5.1.1 amino acid metabolism.synthesis.serine-glycine-cysteine group.serine.phosphoglycerate dehydrogenase encodes a 3-Phosphoglycerate dehydrogenase D-3-phosphoglycerate dehydrogenase","protein_coding" "GSVIVT01016126001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks. PEP1 receptor 1 (PEPR1)","protein_coding" "GSVIVT01016169001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01016180001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01016194001","No alias","Vitis vinifera","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01016227001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes a novel Rab-like GTP-ase that is localized to the peripheral membrane of the endosome. ARA6","protein_coding" "GSVIVT01016240001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01016293001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Protein kinase superfamily protein","protein_coding" "GSVIVT01016318001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "GSVIVT01016457001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog A2B (RABA2b)","protein_coding" "GSVIVT01016464001","No alias","Vitis vinifera","25.8 C1-metabolism.tetrahydrofolate synthase DHFS-FPGS homolog B (DFB)","protein_coding" "GSVIVT01016501001","No alias","Vitis vinifera","1.3.13 PS.calvin cycle.rubisco interacting Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. rubisco activase (RCA)","protein_coding" "GSVIVT01016502001","No alias","Vitis vinifera","30.2.19 signalling.receptor kinases.legume-lectin Concanavalin A-like lectin protein kinase family protein","protein_coding" "GSVIVT01016575001","No alias","Vitis vinifera","29.1.10 protein.aa activation.methionine-tRNA ligase OVULE ABORTION 1 (OVA1)","protein_coding" "GSVIVT01016596001","No alias","Vitis vinifera","30.5 signalling.G-proteins Ras-related small GTP-binding family protein","protein_coding" "GSVIVT01016617001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 6 (PGP6)","protein_coding" "GSVIVT01016648001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01016655001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01016669001","No alias","Vitis vinifera","13.1.1.3.1 amino acid metabolism.synthesis.central amino acid metabolism.alanine.alanine aminotransferase Encodes for alanine aminotransferase ALAAT2. alanine aminotransferase 2 (ALAAT2)","protein_coding" "GSVIVT01016706001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 10 (PGP10)","protein_coding" "GSVIVT01016722001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01016762001","No alias","Vitis vinifera","27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 5 (GRF5)","protein_coding" "GSVIVT01016778001","No alias","Vitis vinifera","34.5 transport.ammonium P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01016794001","No alias","Vitis vinifera","29.2.2 protein.synthesis.ribosome biogenesis ATPasesnucleotide bindingATP bindingnucleoside-triphosphatasestranscription factor binding","protein_coding" "GSVIVT01016807001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. casein kinase 1-like protein 2 (CKL2)","protein_coding" "GSVIVT01016810001","No alias","Vitis vinifera","29.2.3 protein.synthesis.initiation member of eIF4A - eukaryotic initiation factor 4A eif4a-2 (EIF4A-2)","protein_coding" "GSVIVT01016815001","No alias","Vitis vinifera","29.4.1.59 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX Protein kinase superfamily protein","protein_coding" "GSVIVT01016847001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase DEA(D/H)-box RNA helicase family protein","protein_coding" "GSVIVT01016857001","No alias","Vitis vinifera","30.2.18 signalling.receptor kinases.extensin Protein kinase superfamily protein","protein_coding" "GSVIVT01016859001","No alias","Vitis vinifera","29.6 protein.folding heat shock protein 60-3A (HSP60-3A)","protein_coding" "GSVIVT01016871001","No alias","Vitis vinifera","13.1.1.1.4 amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH Glyoxylate reductase located in chloroplasts. glyoxylate reductase 2 (GLYR2)","protein_coding" "GSVIVT01016879001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 6 (MRP6)","protein_coding" "GSVIVT01016880001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 6 (MRP6)","protein_coding" "GSVIVT01016910001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01016920001","No alias","Vitis vinifera","30.2.1 signalling.receptor kinases.leucine rich repeat I Leucine-rich repeat transmembrane protein kinase protein","protein_coding" "GSVIVT01016922001","No alias","Vitis vinifera","30.2.1 signalling.receptor kinases.leucine rich repeat I Leucine-rich repeat transmembrane protein kinase protein","protein_coding" "GSVIVT01016925001","No alias","Vitis vinifera","30.2.1 signalling.receptor kinases.leucine rich repeat I Leucine-rich repeat transmembrane protein kinase protein","protein_coding" "GSVIVT01016941001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc Leucine-rich repeat transmembrane protein kinase protein","protein_coding" "GSVIVT01016947001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01016971001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01016991001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 7 (PDR7)","protein_coding" "GSVIVT01016994001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 1 (PDR1)","protein_coding" "GSVIVT01016998001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 1 (PDR1)","protein_coding" "GSVIVT01016999001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01017003001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "GSVIVT01017016001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01017017001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01017020001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01017023001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01017026001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01017029001","No alias","Vitis vinifera","29.5.7 protein.degradation.metalloprotease embryo defective 2083 (EMB2083)","protein_coding" "GSVIVT01017032001","No alias","Vitis vinifera","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01017061001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog G3D (RABG3d)","protein_coding" "GSVIVT01017067001","No alias","Vitis vinifera","1.2.6 PS.photorespiration.hydroxypyruvate reductase D-isomer specific 2-hydroxyacid dehydrogenase family protein","protein_coding" "GSVIVT01017069001","No alias","Vitis vinifera","1.2.6 PS.photorespiration.hydroxypyruvate reductase D-isomer specific 2-hydroxyacid dehydrogenase family protein","protein_coding" "GSVIVT01017082001","No alias","Vitis vinifera","28.99 DNA.unspecified RAD3-like DNA-binding helicase protein","protein_coding" "GSVIVT01017086001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01017102001","No alias","Vitis vinifera","30.5 signalling.G-proteins small GTP binding protein RAB homolog 1 (RHA1)","protein_coding" "GSVIVT01017108001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure RAD3-like DNA-binding helicase protein","protein_coding" "GSVIVT01017134001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01017136001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01017143001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01017146001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01017149001","No alias","Vitis vinifera","20.1 stress.biotic Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae.","protein_coding" "GSVIVT01017171001","No alias","Vitis vinifera","13.1.6.2 amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "GSVIVT01017172001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01017184001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01017185001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01017187001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01017188001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01017194001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01017196001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01017197001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01017198001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01017201001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01017202001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01017204001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01017222001","No alias","Vitis vinifera","29.5.11.20 protein.degradation.ubiquitin.proteasom 26S proteasome AAA-ATPase subunit regulatory particle triple-A ATPase 6A (RPT6A)","protein_coding" "GSVIVT01017229001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01017232001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01017234001","No alias","Vitis vinifera","30.5 signalling.G-proteins A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. RAN GTPase 3 (RAN3)","protein_coding" "GSVIVT01017261001","No alias","Vitis vinifera","29.4.1.61 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X Protein kinase superfamily protein","protein_coding" "GSVIVT01017267001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01017269001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01017273001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01017308001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure DEAD/DEAH box RNA helicase family protein","protein_coding" "GSVIVT01017326001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-domain-2 5 (SD2-5)","protein_coding" "GSVIVT01017336001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 6 (PDR6)","protein_coding" "GSVIVT01017345001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc Protein kinase superfamily protein","protein_coding" "GSVIVT01017426001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01017454001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase DEAD-box protein abstrakt, putative","protein_coding" "GSVIVT01017480001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01017497001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01017518001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01017522001","No alias","Vitis vinifera","13.1.2.3.4 amino acid metabolism.synthesis.glutamate family.arginine.acetylornithine aminotransferase Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600 WIN2: AT4G31750 WIN3: AT5G13320). HOPW1-1-interacting 1 (WIN1)","protein_coding" "GSVIVT01017568001","No alias","Vitis vinifera","29.4.1.61 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X Protein kinase superfamily protein","protein_coding" "GSVIVT01017603001","No alias","Vitis vinifera","35.1 not assigned.no ontology protein serine/threonine kinasesprotein tyrosine kinasesATP bindingprotein kinases","protein_coding" "GSVIVT01017651001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase DEAD box RNA helicase family protein","protein_coding" "GSVIVT01017654001","No alias","Vitis vinifera","29.4 protein.postranslational modification A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1E (ARFA1E)","protein_coding" "GSVIVT01017662001","No alias","Vitis vinifera","35.1 not assigned.no ontology protein serine/threonine kinasesprotein tyrosine kinasesATP bindingprotein kinases","protein_coding" "GSVIVT01017669001","No alias","Vitis vinifera","31.1 cell.organisation PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2 both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 1 (POK1)","protein_coding" "GSVIVT01017676001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. pleiotropic drug resistance 9 (PDR9)","protein_coding" "GSVIVT01017681001","No alias","Vitis vinifera","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "GSVIVT01017690001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2. CBL-interacting protein kinase 1 (CIPK1)","protein_coding" "GSVIVT01017696001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 11 (PGP11)","protein_coding" "GSVIVT01017700001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling factor18 (CHR18)","protein_coding" "GSVIVT01017719001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA helicase family protein","protein_coding" "GSVIVT01017724001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01017727001","No alias","Vitis vinifera","31.1 cell.organisation Kinesin-13A localized to entire Golgi stacks. Involved in trichome development. KINESIN-13A","protein_coding" "GSVIVT01017736001","No alias","Vitis vinifera","29.3.3 protein.targeting.chloroplast An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. translocon at the outer envelope membrane of chloroplasts 159 (TOC159)","protein_coding" "GSVIVT01017755001","No alias","Vitis vinifera","29.1.7 protein.aa activation.alanine-tRNA ligase alanine-tRNA ligasesnucleic acid bindingligases, forming aminoacyl-tRNA and related compoundsnucleotide bindingATP binding","protein_coding" "GSVIVT01017762001","No alias","Vitis vinifera","29.1.5 protein.aa activation.isoleucine-tRNA ligase ovule abortion 2 (OVA2)","protein_coding" "GSVIVT01017775001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes AtObgC, a plant ortholog of bacterial Obg. AtObgC is a chloroplast-targeting GTPase essential for early embryogenesis. Mutations in this locus result in embryo lethality. The protein is dually localized in the stroma and the inner envelope membrane and is involved in thylakoid membrane biogenesis. EMBRYO DEFECTIVE 269 (EMB269)","protein_coding" "GSVIVT01017789001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "GSVIVT01017805001","No alias","Vitis vinifera","29.4.1 protein.postranslational modification.kinase Protein kinase superfamily protein","protein_coding" "GSVIVT01017819001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a microtubule-associated kinase-like protein RUNKEL (RUK).","protein_coding" "GSVIVT01017842001","No alias","Vitis vinifera","29.4.1.56 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI Protein kinase superfamily protein","protein_coding" "GSVIVT01017873001","No alias","Vitis vinifera","30.6 signalling.MAP kinases member of MAP Kinase mitogen-activated protein kinase 16 (MPK16)","protein_coding" "GSVIVT01017910001","No alias","Vitis vinifera","29.2.3 protein.synthesis.initiation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01017915001","No alias","Vitis vinifera","29.4 protein.postranslational modification NPK1-related protein kinase 3 NPK1-related protein kinase 3 (NP3)","protein_coding" "GSVIVT01017953001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a receptor-like protein kinase. receptor-like protein kinase 1 (RLK1)","protein_coding" "GSVIVT01017968001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01017971001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01018052001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a putative Raf-related kinase. Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01018077001","No alias","Vitis vinifera","29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor GB:P91924 (Dugesia japonica), other ARFs and ARF-like proteins. ADP-ribosylation factor C1 (ARFC1)","protein_coding" "GSVIVT01018089001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a serine/threonine protein kinase with similarities to CBL-interacting protein kinases, SNF1 and SOS2. CBL-interacting protein kinase 7 (CIPK7)","protein_coding" "GSVIVT01018093001","No alias","Vitis vinifera","30.2.21 signalling.receptor kinases.lysine motif protein kinase family protein / peptidoglycan-binding LysM domain-containing protein","protein_coding" "GSVIVT01018116001","No alias","Vitis vinifera","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01018118001","No alias","Vitis vinifera","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01018127001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01018186001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation Translation elongation factor EFG/EF2 protein","protein_coding" "GSVIVT01018213001","No alias","Vitis vinifera","29.6 protein.folding Encodes a putative cytoplasmic chaperonin that is similar to mouse Tcp-1 (t complex polypeptide 1). T-complex protein 1 alpha subunit (TCP-1)","protein_coding" "GSVIVT01018218001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors SNF2 domain-containing protein / helicase domain-containing protein","protein_coding" "GSVIVT01018278001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01018288001","No alias","Vitis vinifera","29.1.14 protein.aa activation.glycine-tRNA ligase glycine-tRNA ligase EMBRYO-DEFECTIVE-DEVELOPMENT 1 (EDD1)","protein_coding" "GSVIVT01018291001","No alias","Vitis vinifera","30.5 signalling.G-proteins Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. RAS 5 (RA-5)","protein_coding" "GSVIVT01018293001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01018308001","No alias","Vitis vinifera","29.1.18 protein.aa activation.glutamine-tRNA ligase ovule abortion 9 (OVA9)","protein_coding" "GSVIVT01018319001","No alias","Vitis vinifera","30.5 signalling.G-proteins A member of ROP GTPase gene family Encodes a Rho-like GTP binding protein. RAC-like 3 (RAC3)","protein_coding" "GSVIVT01018361001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes a GTP-binding protein with similarity to yeast YPT6 . RAB6 can complement the yeast YTP mutant. RAB6A","protein_coding" "GSVIVT01018377001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01018380001","No alias","Vitis vinifera","26.17 misc.dynamin At3g60190 encodes Arabidopsis dynamin-related protein 1E, DRP1E, also known as EDR3, ADL4 and ADL1E, which is 624 amino acid residues long, has a predicted mass of 69.8 kDa and a pI of 7.5. Dynamin-related protein 1E belongs to a plant-specific subclass of dynamin-related proteins (DRP1), consisting of five members in Arabidopsis (A, B, C, D, E). This class is characterized by having an N-terminal GTPase domain, a central ëdynamin 2ë domain and a C-terminal GTPase effector domain (GED), a typical structure for plant dynamin-related proteins. However, this class lacks a PH domain and a proline-rich domain, which are found in classical animal dynamin-like proteins. Based on work on animal dynamins, the plant DRP1 proteins should be able to form polymeric structures that wrap around membranes to facilitate membrane tubulation and pinching off of vesicles, processes that are essential to vesicle trafficking and membrane compartmentalization. The edr3 mutation causes a P77L substitution in the G2 motif of the GTPase domain of DRP1E. edr3 mutant Arabidopsis plants display enhanced cell death in response to powdery mildew infection. DYNAMIN-like 1E (DL1E)","protein_coding" "GSVIVT01018403001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 15 (MRP15)","protein_coding" "GSVIVT01018458001","No alias","Vitis vinifera","33.99 development.unspecified Protein kinase superfamily protein","protein_coding" "GSVIVT01018476001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase DEAD/DEAH box RNA helicase PRH75 PRH75","protein_coding" "GSVIVT01018494001","No alias","Vitis vinifera","17.5.1.1 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity. 1-amino-cyclopropane-1-carboxylate synthase 12 (ACS12)","protein_coding" "GSVIVT01018500001","No alias","Vitis vinifera","29.5.5 protein.degradation.serine protease Encodes ClpX3, a subunit of the Clp protease complex. ATP-dependent Clp protease","protein_coding" "GSVIVT01018502001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01018503001","No alias","Vitis vinifera","30.5 signalling.G-proteins GTP bindingGTP binding","protein_coding" "GSVIVT01018564001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01018574001","No alias","Vitis vinifera","33.99 development.unspecified Encodes a protein with a serine/threonine kinase domain. There are two other closely related members in Arabidopsis. Knock-out mutation results in incomplete root hair elongation. Expression is found all organs examined but is especially strong in elongating root hairs. INCOMPLETE ROOT HAIR ELONGATION (IRE)","protein_coding" "GSVIVT01018584001","No alias","Vitis vinifera","13.1.4.1.1 amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1 (CSR1)","protein_coding" "GSVIVT01018586001","No alias","Vitis vinifera","13.1.4.1.1 amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1 (CSR1)","protein_coding" "GSVIVT01018588001","No alias","Vitis vinifera","13.1.4.1.1 amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1 (CSR1)","protein_coding" "GSVIVT01018591001","No alias","Vitis vinifera","13.1.4.1.1 amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1 (CSR1)","protein_coding" "GSVIVT01018593001","No alias","Vitis vinifera","13.1.4.1.1 amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1 (CSR1)","protein_coding" "GSVIVT01018681001","No alias","Vitis vinifera","35.2 not assigned.unknown Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts. NO ASSOCIATED 1 (NOA1)","protein_coding" "GSVIVT01018715001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2) structural maintenance of chromosomes 2 (SMC2)","protein_coding" "GSVIVT01018729001","No alias","Vitis vinifera","30.5 signalling.G-proteins A member of ROP GTPase family. Rac-like GTP-binding protein ARAC1/ATGP2. Encodes a geranylgeranylated GTP binding protein. Involved in the auxin-activated 26S proteasome-dependent Aux/IAA proteolysis pathway. Arabidopsis RAC-like 1 (ARAC1)","protein_coding" "GSVIVT01018814001","No alias","Vitis vinifera","30.2.7 signalling.receptor kinases.leucine rich repeat VII Leucine-rich receptor-like protein kinase family protein","protein_coding" "GSVIVT01018815001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01018859001","No alias","Vitis vinifera","35.1 not assigned.no ontology Encodes a (D)-2-hydroxyglutarate dehydrogenase. FAD-linked oxidases family protein","protein_coding" "GSVIVT01018883001","No alias","Vitis vinifera","35.2 not assigned.unknown","protein_coding" "GSVIVT01018889001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins HOPZ-ACTIVATED RESISTANCE 1 (ZAR1)","protein_coding" "GSVIVT01018890001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type cytochrome BC1 synthesis (BCS1)","protein_coding" "GSVIVT01018924001","No alias","Vitis vinifera","35.2 not assigned.unknown RNA bindingGTP binding","protein_coding" "GSVIVT01018945001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "GSVIVT01018953001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01018979001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01018982001","No alias","Vitis vinifera","30.2.22 signalling.receptor kinases.proline extensin like Proline-rich extensin-like receptor kinase 4. Functions at an early stage of ABA signalling inhibiting primary root cell elongation by perturbing Ca2+ homeostasis. roline-rich extensin-like receptor kinase 4 (PERK4)","protein_coding" "GSVIVT01019023001","No alias","Vitis vinifera","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01019038001","No alias","Vitis vinifera","30.2.21 signalling.receptor kinases.lysine motif protein kinase family protein / peptidoglycan-binding LysM domain-containing protein","protein_coding" "GSVIVT01019052001","No alias","Vitis vinifera","27.1.20 RNA.processing.degradation dicer Encodes a Dicer-like protein that functions in the antiviral silencing response in turnip-crinkle virus-infected plants but not in TMV or CMV-strain-Y-infected plants. Involved in the production of ta-siRNAs. Partially antagonizes the production of miRNAs by DCL1. Substitutes for DCL4 to produce viral siRNA when DCL4 is missing or inhibited. Able to produce siRNAs but not miRNAs. dicer-like 2 (DCL2)","protein_coding" "GSVIVT01019131001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of NAP subfamily of transporters. Mutations in this gene suppress the low temperature-induced phenotype of Arabidopsis tocopherol-deficient mutant vte2. non-intrinsic ABC protein 11 (NAP11)","protein_coding" "GSVIVT01019193001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins Disease resistance protein (TIR-NBS-LRR class) family","protein_coding" "GSVIVT01019195001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01019201001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01019205001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01019239001","No alias","Vitis vinifera","29.5.7 protein.degradation.metalloprotease FtsH extracellular protease family","protein_coding" "GSVIVT01019246001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01019259001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01019290001","No alias","Vitis vinifera","30.5 signalling.G-proteins Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. RAS 5 (RA-5)","protein_coding" "GSVIVT01019319001","No alias","Vitis vinifera","29.1.6 protein.aa activation.lysine-tRNA ligase lysyl-tRNA synthetase 1 (ATKRS-1)","protein_coding" "GSVIVT01019359001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ROOT GROWTH DEFECTIVE 3 (RGD3)","protein_coding" "GSVIVT01019392001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01019406001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. MAP kinase 4 (MPK4)","protein_coding" "GSVIVT01019407001","No alias","Vitis vinifera","20.2.1 stress.abiotic.heat Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. heat shock protein 90.1 (HSP90.1)","protein_coding" "GSVIVT01019414001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01019418001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01019442001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01019446001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01019469001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 14 (MRP14)","protein_coding" "GSVIVT01019471001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 14 (MRP14)","protein_coding" "GSVIVT01019473001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 14 (MRP14)","protein_coding" "GSVIVT01019475001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 14 (MRP14)","protein_coding" "GSVIVT01019476001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 14 (MRP14)","protein_coding" "GSVIVT01019483001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01019514001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01019546001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis. dynamin-like protein (DL1)","protein_coding" "GSVIVT01019609001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 3 (GCN3)","protein_coding" "GSVIVT01019643001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01019739001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality. YODA (YDA)","protein_coding" "GSVIVT01019746001","No alias","Vitis vinifera","33.99 development.unspecified Encodes AtMurE, a homolog of the bacterial MurE that catalyze the ATP-dependent formation of UDP-N-acetylmuramic acid-tripeptide in bacterial peptidoglycan biosynthesis. Localized to plastids. AtMurE is involved in chloroplast biogenesis. MURE","protein_coding" "GSVIVT01019748001","No alias","Vitis vinifera","23.1.2.31 nucleotide metabolism.synthesis.purine.GMP synthetase GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative","protein_coding" "GSVIVT01019752001","No alias","Vitis vinifera","29.1.1 protein.aa activation.tyrosine-tRNA ligase Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial","protein_coding" "GSVIVT01019753001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01019787001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure RNAhelicase-like 8 (RH8)","protein_coding" "GSVIVT01019796001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality. YODA (YDA)","protein_coding" "GSVIVT01019804001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase DEA(D/H)-box RNA helicase family protein","protein_coding" "GSVIVT01019825001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure replication factor C 2 (RFC2)","protein_coding" "GSVIVT01019868001","No alias","Vitis vinifera","4.1.16 glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK) phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1)","protein_coding" "GSVIVT01019871001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01019893001","No alias","Vitis vinifera","1.2.6 PS.photorespiration.hydroxypyruvate reductase D-isomer specific 2-hydroxyacid dehydrogenase family protein","protein_coding" "GSVIVT01019894001","No alias","Vitis vinifera","1.2.6 PS.photorespiration.hydroxypyruvate reductase D-isomer specific 2-hydroxyacid dehydrogenase family protein","protein_coding" "GSVIVT01019913001","No alias","Vitis vinifera","27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 5 (GRF5)","protein_coding" "GSVIVT01019920001","No alias","Vitis vinifera","17.5.1.1 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase Encodes an aminotransferase with broad specificity for aspartate and aromatic amino aids such as tyrosine and phenylalanine. It does not act on branched chain amino acids and does not have ACC synthase activity. ACC synthase 10 (ACS10)","protein_coding" "GSVIVT01019928001","No alias","Vitis vinifera","31.1 cell.organisation Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations. armadillo repeat kinesin 3 (ARK3)","protein_coding" "GSVIVT01019931001","No alias","Vitis vinifera","31.1 cell.organisation Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations. armadillo repeat kinesin 3 (ARK3)","protein_coding" "GSVIVT01020042001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Encodes protein kinase APK2b. protein kinase 2B (APK2B)","protein_coding" "GSVIVT01020137001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage. EMBRYO DEFECTIVE 25 (EMB25)","protein_coding" "GSVIVT01020175001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA helicase family protein","protein_coding" "GSVIVT01020182001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "GSVIVT01020206001","No alias","Vitis vinifera","29.1.3 protein.aa activation.threonine-tRNA ligase Encodes a dual-targeted threonyl-tRNA synthetase found in both the chloroplast and mitochondrion. Threonyl-tRNA synthetase","protein_coding" "GSVIVT01020230001","No alias","Vitis vinifera","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "GSVIVT01020266001","No alias","Vitis vinifera","13.1.2.3.4 amino acid metabolism.synthesis.glutamate family.arginine.acetylornithine aminotransferase Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600 WIN2: AT4G31750 WIN3: AT5G13320). HOPW1-1-interacting 1 (WIN1)","protein_coding" "GSVIVT01020267001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01020269001","No alias","Vitis vinifera","13.1.2.3.4 amino acid metabolism.synthesis.glutamate family.arginine.acetylornithine aminotransferase Encodes HopW1-1-Interacting protein 1 (WIN1). Interacts with the P. syringae effector HopW1-1. WIN1 is a putative acetylornithine transaminase. Modulates plant defenses against bacteria. Three WIN proteins are identified so far (WIN1: AT1G80600 WIN2: AT4G31750 WIN3: AT5G13320). HOPW1-1-interacting 1 (WIN1)","protein_coding" "GSVIVT01020273001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01020278001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins Resistance gene, mediates resistance against the bacterial pathogen Pseudomonas syringae.","protein_coding" "GSVIVT01020290001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01020306001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01020310001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01020314001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01020319001","No alias","Vitis vinifera","29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase class IIc family protein","protein_coding" "GSVIVT01020322001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01020325001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01020335001","No alias","Vitis vinifera","29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase class IIc family protein","protein_coding" "GSVIVT01020339001","No alias","Vitis vinifera","29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase class IIc family protein","protein_coding" "GSVIVT01020347001","No alias","Vitis vinifera","29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase class IIc family protein","protein_coding" "GSVIVT01020355001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01020404001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1)","protein_coding" "GSVIVT01020436001","No alias","Vitis vinifera","30.5 signalling.G-proteins GTP-binding protein-related","protein_coding" "GSVIVT01020456001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Protein kinase superfamily protein","protein_coding" "GSVIVT01020482001","No alias","Vitis vinifera","28.2 DNA.repair recA DNA recombination family protein","protein_coding" "GSVIVT01020486001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01020489001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01020495001","No alias","Vitis vinifera","29.2.3 protein.synthesis.initiation Encodes a chloroplast localized protein with similarity to translation initiation factor 2. Can complement loss of INFB in E.coli suggesting FUG1 does function as a translation initiation factor in vivo. Identified as a suppressor of the leaf variegation mutant var2-6. Suppression is only seen in hypomorphs as complete loss of function alleles are embryo lethal. fu-gaeri1 (FUG1)","protein_coding" "GSVIVT01020503001","No alias","Vitis vinifera","31.1 cell.organisation Di-glucose binding protein with Kinesin motor domain","protein_coding" "GSVIVT01020511001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01020556001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01020568001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure switch 2 (SWI2)","protein_coding" "GSVIVT01020576001","No alias","Vitis vinifera","29.1 protein.aa activation Nucleotidylyl transferase superfamily protein","protein_coding" "GSVIVT01020577001","No alias","Vitis vinifera","35.2 not assigned.unknown ATP bindingprotein kinasesprotein serine/threonine kinases","protein_coding" "GSVIVT01020585001","No alias","Vitis vinifera","13.2.6.2 amino acid metabolism.degradation.aromatic aa.tyrosine Confers auxin overproduction. Mutants have an over-proliferation of lateral roots. Encodes a C-S lyase involved in converting S-alkylthiohydroximate to thiohydroximate in glucosinolate biosynthesis. SUPERROOT 1 (SUR1)","protein_coding" "GSVIVT01020588001","No alias","Vitis vinifera","16.1.3 secondary metabolism.isoprenoids.tocopherol biosynthesis Tyrosine transaminase family protein","protein_coding" "GSVIVT01020592001","No alias","Vitis vinifera","16.1.3 secondary metabolism.isoprenoids.tocopherol biosynthesis Tyrosine transaminase family protein","protein_coding" "GSVIVT01020594001","No alias","Vitis vinifera","16.1.3 secondary metabolism.isoprenoids.tocopherol biosynthesis Tyrosine transaminase family protein","protein_coding" "GSVIVT01020608001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI HAESA-like 1 (HSL1)","protein_coding" "GSVIVT01020651001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog A1E (RABA1e)","protein_coding" "GSVIVT01020652001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation elongation factor family protein","protein_coding" "GSVIVT01020653001","No alias","Vitis vinifera","30.5 signalling.G-proteins Belongs to the plant-specific ROP group of Rho GTPases localized to the plasma membrane of tips of root hairs involved in polar growth control. RAC-like GTP binding protein 5 (ARAC5)","protein_coding" "GSVIVT01020687001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "GSVIVT01020729001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01020730001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01020732001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01020739001","No alias","Vitis vinifera","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase ASPARTATE AMINOTRANSFERASE 1 aspartate aminotransferase 1 (ASP1)","protein_coding" "GSVIVT01020741001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. SHAGGY-related protein kinase dZeta (SKdZeta)","protein_coding" "GSVIVT01020744001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01020745001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01020746001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01020760001","No alias","Vitis vinifera","29.5.7 protein.degradation.metalloprotease Metalloprotease that functions in thylakoid membrane biogenesis. Involved in the repair of PSII following damaged incurred during photoinhibition. Forms a complex with VAR1. Mutants show a variegated phenotype, which decreases during development. Transcript and protein levels increase with light intensity. VARIEGATED 2 (VAR2)","protein_coding" "GSVIVT01020778001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-domain-2 5 (SD2-5)","protein_coding" "GSVIVT01020856001","No alias","Vitis vinifera","29.4 protein.postranslational modification TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01020857001","No alias","Vitis vinifera","30.2.13 signalling.receptor kinases.leucine rich repeat XIII Protein kinase superfamily protein","protein_coding" "GSVIVT01020860001","No alias","Vitis vinifera","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "GSVIVT01020940001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01020962001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01020964001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01020980001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01020983001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01021031001","No alias","Vitis vinifera","31.1 cell.organisation Microtubule motor kinesin PAKRP1L/Kinesin-12B. Together with PAKRP1/Kinesin-12A, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast. KINESIN-12B","protein_coding" "GSVIVT01021118001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI HAESA-like 1 (HSL1)","protein_coding" "GSVIVT01021119001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc Protein kinase superfamily protein","protein_coding" "GSVIVT01021122001","No alias","Vitis vinifera","30.5 signalling.G-proteins Guanylate-binding family protein","protein_coding" "GSVIVT01021143001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog A1F (RABA1f)","protein_coding" "GSVIVT01021145001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes a Rac-like protein ARAC2. A member of ROP GTPase gene family. RAC-like 2 (RAC2)","protein_coding" "GSVIVT01021184001","No alias","Vitis vinifera","5.2 fermentation.PDC pyruvate decarboxylase-2 pyruvate decarboxylase-2 (PDC2)","protein_coding" "GSVIVT01021231001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain. CBL-interacting protein kinase 20 (CIPK20)","protein_coding" "GSVIVT01021239001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01021240001","No alias","Vitis vinifera","30.2.2 signalling.receptor kinases.leucine rich repeat II Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01021253001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog A1D (RABA1d)","protein_coding" "GSVIVT01021278001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Receptor-like serine/threonine kinase (RKF1). The putative extracellular domain of the RKF1 protein","protein_coding" "GSVIVT01021283001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01021286001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01021289001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01021291001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01021295001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01021365001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 5 (PGP5)","protein_coding" "GSVIVT01021366001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 9 (PGP9)","protein_coding" "GSVIVT01021407001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB. FLAGELLIN-SENSITIVE 2 (FLS2)","protein_coding" "GSVIVT01021409001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB. FLAGELLIN-SENSITIVE 2 (FLS2)","protein_coding" "GSVIVT01021426001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure MINICHROMOSOME MAINTENANCE 3 (MCM3)","protein_coding" "GSVIVT01021441001","No alias","Vitis vinifera","29.3.2 protein.targeting.mitochondria mitochondrial processing peptidase alpha subunit (MPPalpha)","protein_coding" "GSVIVT01021470001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01021492001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01021525001","No alias","Vitis vinifera","13.2.2.3 amino acid metabolism.degradation.glutamate family.arginine Encodes an ornithine delta-aminotransferase that is transcriptionally up-regulated in young seedlings and in response to salt stress. It is unlikely to play a role in salt-stress-induced proline accumulation, however, it appears to participate in arginine and ornithine catabolism. ornithine-delta-aminotransferase (DELTA-OAT)","protein_coding" "GSVIVT01021538001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure plant DEAD box-like RNA helicase. RNA helicase 1 (RH1)","protein_coding" "GSVIVT01021541001","No alias","Vitis vinifera","29.4 protein.postranslational modification Arabidopsis thaliana CBL-interacting protein kinase 23. CIPK23 serves as a positive regulator of the potassium transporter AKT1 by directly phosphorylating AKT1. CIPK23 is activated by the binding of two calcineurin B-like proteins, CBL1 and CBL9. CBL-interacting protein kinase 23 (CIPK23)","protein_coding" "GSVIVT01021569001","No alias","Vitis vinifera","16.4.1 secondary metabolism.N misc.alkaloid-like Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "GSVIVT01021573001","No alias","Vitis vinifera","16.4.1 secondary metabolism.N misc.alkaloid-like Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "GSVIVT01021582001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01021589001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "GSVIVT01021593001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 13 (MRP13)","protein_coding" "GSVIVT01021594001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes a multidrug resistance-associated protein that is MgATP-energized glutathione S-conjugate pump. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 2 (MRP2)","protein_coding" "GSVIVT01021595001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 13 (MRP13)","protein_coding" "GSVIVT01021629001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01021635001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01021636001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01021647001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01021666001","No alias","Vitis vinifera","35.2 not assigned.unknown GTP binding","protein_coding" "GSVIVT01021668001","No alias","Vitis vinifera","13.2.4.3 amino acid metabolism.degradation.branched chain group.valine 6-phosphogluconate dehydrogenase family protein","protein_coding" "GSVIVT01021687001","No alias","Vitis vinifera","30.2.25 signalling.receptor kinases.wall associated kinase Wall-associated kinase family protein","protein_coding" "GSVIVT01021694001","No alias","Vitis vinifera","30.2.25 signalling.receptor kinases.wall associated kinase encodes a wall-associated kinase wall associated kinase 5 (WAK5)","protein_coding" "GSVIVT01021715001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01021720001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases MATERNAL EFFECT EMBRYO ARREST 23 (MEE23)","protein_coding" "GSVIVT01021723001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01021726001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01021728001","No alias","Vitis vinifera","35.1 not assigned.no ontology toprim domain-containing protein","protein_coding" "GSVIVT01021733001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01021734001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01021736001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01021739001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01021745001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "GSVIVT01021759001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01021791001","No alias","Vitis vinifera","29.5.7 protein.degradation.metalloprotease embryo defective 2458 (emb2458)","protein_coding" "GSVIVT01021831001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01021854001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01021895001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01021907001","No alias","Vitis vinifera","29.4.1 protein.postranslational modification.kinase Protein kinase superfamily protein","protein_coding" "GSVIVT01021935001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01021944001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01021955001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01021958001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01021990001","No alias","Vitis vinifera","29.1.10 protein.aa activation.methionine-tRNA ligase methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative","protein_coding" "GSVIVT01022022001","No alias","Vitis vinifera","34.2 transport.sugars Major facilitator superfamily protein","protein_coding" "GSVIVT01022047001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022056001","No alias","Vitis vinifera","21.2.2 redox.ascorbate and glutathione.glutathione Encodes a protein with similarity to glutathione synthetases, which catalyzes one of the early steps in glutathione biosynthesis. Two transcripts have been detected the longer transcript is less abundant and the protein is localized to the chloroplast. The smaller transcript, in which the transit peptide is truncated, is localized to the cytosol. glutathione synthetase 2 (GSH2)","protein_coding" "GSVIVT01022068001","No alias","Vitis vinifera","12.4 N-metabolism.misc FMN-linked oxidoreductases superfamily protein","protein_coding" "GSVIVT01022070001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01022072001","No alias","Vitis vinifera","31.1 cell.organisation encodes a kinesin-like protein with an N-terminal microtubule binding motor domain. Protein is localized to the periphery of the cytoplasm and mutants in the gene exhibit altered orientation of cellulose microfibrils and reduced mechanical strength of fibers. FRAGILE FIBER 1 (FRA1)","protein_coding" "GSVIVT01022113001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01022114001","No alias","Vitis vinifera","1.1.30 PS.lightreaction.state transition Protein kinase superfamily protein","protein_coding" "GSVIVT01022117001","No alias","Vitis vinifera","35.2 not assigned.unknown member of MEKK subfamily mitogen-activated protein kinase kinase kinase 21 (MAPKKK21)","protein_coding" "GSVIVT01022128001","No alias","Vitis vinifera","17.1.1.1.1 hormone metabolism.abscisic acid.synthesis-degradation.synthesis.zeaxanthin epoxidase Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do. ABA DEFICIENT 1 (ABA1)","protein_coding" "GSVIVT01022161001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01022163001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01022201001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01022209001","No alias","Vitis vinifera","30.2.2 signalling.receptor kinases.leucine rich repeat II Plasma membrane LRR receptor-like serine threonine kinase expressed during embryogenesis in locules until stage 6 anthers, with higher expression in the tapetal cell layer. SERK1 and SERK2 receptor kinases function redundantly as an important control point for sporophytic development controlling male gametophyte production. somatic embryogenesis receptor-like kinase 2 (SERK2)","protein_coding" "GSVIVT01022212001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich receptor-like protein kinase family protein","protein_coding" "GSVIVT01022232001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01022235001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 5 (GCN5)","protein_coding" "GSVIVT01022244001","No alias","Vitis vinifera","30.5 signalling.G-proteins The LIP1 gene encodes a small GTPase that influences the light input pathway of the plant circadian network. An MBP:LIP1 fusion protein has GTP hydrolyzing abilities in vitro. In plants, LIP1 seems to play a negative role in regulating circadian period that can be suppressed by light. LIP1 also seems to negatively affect light-pulse-dependent resetting of the clock, especially during the first portion of the subjective evening. LIP1 expression levels are not significantly affected by the circadian clock in seedlings grown under LL conditions. The levels of the YFP:LIP1 protein expressed under the control of the 35S promoter, shows a low amplitude variation, with protein levels peaking near the beginning of subjective night under LL conditions. In hypocotyl epidermal cells of dark and light-grown seedlings, a YFP:LIP1 fusion protein can be seen in the cytoplasm and the nucleus, and does not cluster in nuclear speckles. LIP1 may also be involved in photomorphogenesis. Light Insensitive Period1 (LIP1)","protein_coding" "GSVIVT01022246001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog G3A (RABG3A)","protein_coding" "GSVIVT01022261001","No alias","Vitis vinifera","17.3.2.1 hormone metabolism.brassinosteroid.signal transduction.BRI Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus. BRASSINOSTEROID INSENSITIVE 1 (BRI1)","protein_coding" "GSVIVT01022268001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01022292001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01022308001","No alias","Vitis vinifera","35.2 not assigned.unknown GTP binding","protein_coding" "GSVIVT01022342001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01022366001","No alias","Vitis vinifera","27.3.99 RNA.regulation of transcription.unclassified significant sequence similarity to plant and animal cyclin-dependent protein kinases, and was classified as an E-type CDK with a SPTAIRE cyclin binding motif in the kinase domain. cyclin-dependent kinase E1 (CDKE1)","protein_coding" "GSVIVT01022409001","No alias","Vitis vinifera","30.5 signalling.G-proteins Small GTP-binding protein","protein_coding" "GSVIVT01022427001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01022468001","No alias","Vitis vinifera","35.1 not assigned.no ontology pigment defective 318 (PDE318)","protein_coding" "GSVIVT01022507001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Encodes a protein with glycolate dehydrogenase activity, which was shown to complement various subunits of the E. coli glycolate oxidase complex. It has not been ruled out that the enzyme might be involved in other catalytic activities in vivo. FAD-linked oxidases family protein","protein_coding" "GSVIVT01022524001","No alias","Vitis vinifera","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 20 (CPK20)","protein_coding" "GSVIVT01022526001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "GSVIVT01022576001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01022606001","No alias","Vitis vinifera","30.3 signalling.calcium A calcium-dependent protein kinase that can phosphorylate phenylalanine ammonia lyase (PAL), a key enzyme in pathogen defense. calcium dependent protein kinase 1 (CPK1)","protein_coding" "GSVIVT01022626001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure minichromosome maintenance 9 (MCM9)","protein_coding" "GSVIVT01022631001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure minichromosome maintenance 9 (MCM9)","protein_coding" "GSVIVT01022675001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022729001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01022730001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01022771001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01022804001","No alias","Vitis vinifera","11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein Acyl-CoA-binding protein. Bind acyl-CoA esters and protect acyl-CoAs from degradation by microsomal acyl-hydrolases. acyl-CoA-binding protein 6 (ACBP6)","protein_coding" "GSVIVT01022827001","No alias","Vitis vinifera","35.2 not assigned.unknown member of MEKK subfamily mitogen-activated protein kinase kinase kinase 21 (MAPKKK21)","protein_coding" "GSVIVT01022837001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01022851001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022856001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022917001","No alias","Vitis vinifera","7.1.3 OPP.oxidative PP.6-phosphogluconate dehydrogenase 6-phosphogluconate dehydrogenase family protein","protein_coding" "GSVIVT01022922001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "GSVIVT01022931001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022937001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022941001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022947001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022951001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022961001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022963001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022965001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01022979001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01022984001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01022988001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01022996001","No alias","Vitis vinifera","29.1.7 protein.aa activation.alanine-tRNA ligase Alanyl-tRNA synthetase (ALATS)","protein_coding" "GSVIVT01023011001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023015001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023024001","No alias","Vitis vinifera","35.1 not assigned.no ontology HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1)","protein_coding" "GSVIVT01023028001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01023032001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023033001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023037001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023048001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023068001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023072001","No alias","Vitis vinifera","29.1.22 protein.aa activation.asparagine-tRNA ligase Encodes a putative cytosolic asparaginyl-tRNA synthetase. SYNC1","protein_coding" "GSVIVT01023079001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023141001","No alias","Vitis vinifera","29.5.5 protein.degradation.serine protease ATP-dependent Clp protease","protein_coding" "GSVIVT01023155001","No alias","Vitis vinifera","26.17 misc.dynamin involved in trafficking from the trans-Golgi Network to the central vacuole. dynamin-like protein 6 (ADL6)","protein_coding" "GSVIVT01023163001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023173001","No alias","Vitis vinifera","20.1 stress.biotic Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2. RESISTANT TO P. SYRINGAE 2 (RPS2)","protein_coding" "GSVIVT01023203001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023207001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023216001","No alias","Vitis vinifera","29.4 protein.postranslational modification member of MEKK subfamily mitogen-activated protein kinase kinase kinase 15 (MAPKKK15)","protein_coding" "GSVIVT01023220001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01023224001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023225001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes a putative GTP-binding protein. Associates with organelles on a pathway from the Golgi to the plasma membrane in interphase. In dividing cells acts at the cell plate. RAB GTPase 11C (RAB11c)","protein_coding" "GSVIVT01023235001","No alias","Vitis vinifera","29.4 protein.postranslational modification shaggy-like protein kinase 41 (SK41)","protein_coding" "GSVIVT01023271001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure RNA helicase family protein","protein_coding" "GSVIVT01023320001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023336001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01023339001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023349001","No alias","Vitis vinifera","29.4 protein.postranslational modification member of MEKK subfamily mitogen-activated protein kinase kinase kinase 19 (MAPKKK19)","protein_coding" "GSVIVT01023353001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01023358001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01023365001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01023369001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01023376001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01023393001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ATRX","protein_coding" "GSVIVT01023404001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023406001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2. RESISTANT TO P. SYRINGAE 2 (RPS2)","protein_coding" "GSVIVT01023432001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023444001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023528001","No alias","Vitis vinifera","29.1.1 protein.aa activation.tyrosine-tRNA ligase EMBRYO DEFECTIVE 2768 (emb2768)","protein_coding" "GSVIVT01023539001","No alias","Vitis vinifera","4.1.16 glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. phosphoenolpyruvate carboxylase kinase 1 (PPCK1)","protein_coding" "GSVIVT01023551001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023556001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023557001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023563001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023570001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023577001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023579001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01023620001","No alias","Vitis vinifera","29.3.4.99 protein.targeting.secretory pathway.unspecified signal recognition particle receptor alpha subunit family protein","protein_coding" "GSVIVT01023624001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023666001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01023673001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01023676001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01023677001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01023713001","No alias","Vitis vinifera","35.1 not assigned.no ontology AFG1-like ATPase family protein","protein_coding" "GSVIVT01023748001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023810001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type cytochrome BC1 synthesis (BCS1)","protein_coding" "GSVIVT01023828001","No alias","Vitis vinifera","29.5.11.20 protein.degradation.ubiquitin.proteasom AAA-type ATPase family protein","protein_coding" "GSVIVT01023832001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin. DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1 (DRD1)","protein_coding" "GSVIVT01023842001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023855001","No alias","Vitis vinifera","29.1.17 protein.aa activation.glutamate-tRNA ligase Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. glutamate tRNA synthetase (ERS)","protein_coding" "GSVIVT01023866001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01023877001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "GSVIVT01023899001","No alias","Vitis vinifera","29.4.1.56 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "GSVIVT01023918001","No alias","Vitis vinifera","29.1.7 protein.aa activation.alanine-tRNA ligase A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. EMBRYO DEFECTIVE 1030 (EMB1030)","protein_coding" "GSVIVT01023939001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "GSVIVT01023941001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "GSVIVT01023942001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "GSVIVT01023944001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "GSVIVT01023946001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "GSVIVT01023948001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "GSVIVT01023982001","No alias","Vitis vinifera","34.1.1.1 transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit B ATPase, V1 complex, subunit B protein","protein_coding" "GSVIVT01023999001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "GSVIVT01024000001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "GSVIVT01024012001","No alias","Vitis vinifera","13.2.5.2 amino acid metabolism.degradation.serine-glycine-cysteine group.glycine Encodes hydroxypyruvate reductase. hydroxypyruvate reductase (HPR)","protein_coding" "GSVIVT01024026001","No alias","Vitis vinifera","29.4.1.56 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "GSVIVT01024029001","No alias","Vitis vinifera","30.5 signalling.G-proteins Belongs to the plant-specific ROP group of Rho GTPases localized to the plasma membrane of tips of root hairs involved in polar growth control. RAC-like GTP binding protein 5 (ARAC5)","protein_coding" "GSVIVT01024062001","No alias","Vitis vinifera","29.3.3 protein.targeting.chloroplast multimeric translocon complex in the outer envelope membrane 132 (TOC132)","protein_coding" "GSVIVT01024096001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01024097001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01024099001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01024100001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01024101001","No alias","Vitis vinifera","20.1 stress.biotic Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13)","protein_coding" "GSVIVT01024102001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01024114001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01024158001","No alias","Vitis vinifera","27.3.12 RNA.regulation of transcription.C3H zinc finger family FMN-linked oxidoreductases superfamily protein","protein_coding" "GSVIVT01024172001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01024187001","No alias","Vitis vinifera","26.17 misc.dynamin A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.","protein_coding" "GSVIVT01024203001","No alias","Vitis vinifera","31.1 cell.organisation Kinesin motor family protein","protein_coding" "GSVIVT01024207001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure MINICHROMOSOME MAINTENANCE 4 (MCM4)","protein_coding" "GSVIVT01024225001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin. DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1 (DRD1)","protein_coding" "GSVIVT01024227001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01024236001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "GSVIVT01024260001","No alias","Vitis vinifera","29.4 protein.postranslational modification yeast YAK1-related gene 1 (YAK1)","protein_coding" "GSVIVT01024313001","No alias","Vitis vinifera","29.1.7 protein.aa activation.alanine-tRNA ligase Alanyl-tRNA synthetase (ALATS)","protein_coding" "GSVIVT01024320001","No alias","Vitis vinifera","29.1.7 protein.aa activation.alanine-tRNA ligase Alanyl-tRNA synthetase (ALATS)","protein_coding" "GSVIVT01024326001","No alias","Vitis vinifera","27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 5 (GRF5)","protein_coding" "GSVIVT01024350001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01024382001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01024407001","No alias","Vitis vinifera","29.5.11.20 protein.degradation.ubiquitin.proteasom P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01024410001","No alias","Vitis vinifera","1.3.12 PS.calvin cycle.PRK phosphoribulokinase (PRK)","protein_coding" "GSVIVT01024420001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01024469001","No alias","Vitis vinifera","29.3.3 protein.targeting.chloroplast Outer membrane GTPase protein that may function in import of nuclear encoded proteins into the chloroplast. Phosphorylation of the G-domains regulate translocon assembly. translocon at the outer envelope membrane of chloroplasts 34 (TOC34)","protein_coding" "GSVIVT01024512001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin. DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1 (DRD1)","protein_coding" "GSVIVT01024519001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Encodes a (d)NTP-dependent 3'->5' DNA helicase. This protein can also disrupt D loop structures and may mediate branch migration of Holliday junctions when tested in vitro. The unwinding activity of the enzyme depends on the presence of divalent cations (Mg2+, Mn2+, or Ca2+, but not Zn2+).(d)NTPs are also required with ATP and dATP supporting the greatest amount of DNA unwinding in vitro. RECQ helicase L2 (RECQL2)","protein_coding" "GSVIVT01024527001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01024538001","No alias","Vitis vinifera","30.2.8.1 signalling.receptor kinases.leucine rich repeat VIII.VIII-1 Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01024544001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01024552001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase DEA(D/H)-box RNA helicase family protein","protein_coding" "GSVIVT01024566001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01024578001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01024584001","No alias","Vitis vinifera","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01024609001","No alias","Vitis vinifera","13.2.4.1 amino acid metabolism.degradation.branched chain group.shared Encodes a protein that is predicted to have beta-alanine aminotransferase activity. PYRIMIDINE 4 (PYD4)","protein_coding" "GSVIVT01024663001","No alias","Vitis vinifera","35.2 not assigned.unknown unknown protein Has 30","protein_coding" "GSVIVT01024699001","No alias","Vitis vinifera","4.1.6 glycolysis.cytosolic branch.fructose-2,6-bisphosphatase (Fru2,6BisPase) Encodes the bifunctional enzyme fructose-6-phosphate 2-kinase/fructose-2,6-bisphosphatase. "fructose-2,6-bisphosphatase" (F2KP)","protein_coding" "GSVIVT01024702001","No alias","Vitis vinifera","5.2 fermentation.PDC Thiamine pyrophosphate dependent pyruvate decarboxylase family protein","protein_coding" "GSVIVT01024709001","No alias","Vitis vinifera","30.6 signalling.MAP kinases member of MEKK subfamily mitogen-activated protein kinase kinase kinase 13 (MAPKKK13)","protein_coding" "GSVIVT01024729001","No alias","Vitis vinifera","29.5.5 protein.degradation.serine protease Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01024731001","No alias","Vitis vinifera","30.2.26 signalling.receptor kinases.crinkly like CRINKLY4 related 3 (CCR3)","protein_coding" "GSVIVT01024743001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 3 (PDR3)","protein_coding" "GSVIVT01024791001","No alias","Vitis vinifera","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the chloroplast FTSH protease 9 (ftsh9)","protein_coding" "GSVIVT01024803001","No alias","Vitis vinifera","29.4.1.54 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IV Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA calmodulin-binding receptor-like cytoplasmic kinase 1 (CRCK1)","protein_coding" "GSVIVT01024809001","No alias","Vitis vinifera","28.99 DNA.unspecified RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding" "GSVIVT01024910001","No alias","Vitis vinifera","1.3.13 PS.calvin cycle.rubisco interacting Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. rubisco activase (RCA)","protein_coding" "GSVIVT01024927001","No alias","Vitis vinifera","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the mitochondrion FTSH protease 10 (ftsh10)","protein_coding" "GSVIVT01024951001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase capable of phosphorylating tyrosine, serine, and threonine residues APK1A","protein_coding" "GSVIVT01024971001","No alias","Vitis vinifera","35.1 not assigned.no ontology GTP-binding protein Obg/CgtA","protein_coding" "GSVIVT01025028001","No alias","Vitis vinifera","30.5 signalling.G-proteins Ras-related small GTP-binding family protein","protein_coding" "GSVIVT01025040001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 20 (PGP20)","protein_coding" "GSVIVT01025071001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01025082001","No alias","Vitis vinifera","30.11 signalling.light Blue-light photoreceptor.","protein_coding" "GSVIVT01025091001","No alias","Vitis vinifera","30.6 signalling.MAP kinases member of MAP Kinase ATMPK13","protein_coding" "GSVIVT01025105001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Encodes a mitogen-activated kinase whose mRNA levels increase in response to touch, cold, salinity stress and chitin oligomers.Also functions in ovule development. Heterozygous MPK3 mutants in a homozygous MPK6 background are female sterile due to defects in integument development. MPK3 can be dephosphorylated by MKP2 in vitro. mitogen-activated protein kinase 3 (MPK3)","protein_coding" "GSVIVT01025125001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01025133001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01025146001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "GSVIVT01025173001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01025181001","No alias","Vitis vinifera","33.99 development.unspecified RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1)","protein_coding" "GSVIVT01025197001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01025212001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc NCRK","protein_coding" "GSVIVT01025230001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "GSVIVT01025260001","No alias","Vitis vinifera","13.1.7.7 amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal. histidinol phosphate aminotransferase 1 (HPA1)","protein_coding" "GSVIVT01025261001","No alias","Vitis vinifera","13.1.7.7 amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal. histidinol phosphate aminotransferase 1 (HPA1)","protein_coding" "GSVIVT01025272001","No alias","Vitis vinifera","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus Nucleolar GTP-binding protein","protein_coding" "GSVIVT01025275001","No alias","Vitis vinifera","30.5 signalling.G-proteins embryo defective 2738 (emb2738)","protein_coding" "GSVIVT01025279001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Origin Recognition Complex subunit 1b. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with ORC2 and ORC5. Highly expressed in proliferating cells. Expression levels are independent of light regime. origin of replication complex 1B (ORC1B)","protein_coding" "GSVIVT01025304001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01025309001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01025346001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a receptor-like protein kinase. receptor-like protein kinase 1 (RLK1)","protein_coding" "GSVIVT01025376001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01025378001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01025382001","No alias","Vitis vinifera","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01025385001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "GSVIVT01025419001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase DEA(D/H)-box RNA helicase family protein","protein_coding" "GSVIVT01025457001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Origin Recognition Complex subunit 1b. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts with ORC2 and ORC5. Highly expressed in proliferating cells. Expression levels are independent of light regime. origin of replication complex 1B (ORC1B)","protein_coding" "GSVIVT01025490001","No alias","Vitis vinifera","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01025512001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01025535001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure minichromosome maintenance 8 (MCM8)","protein_coding" "GSVIVT01025540001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Involved in the patterning and shape of leaf trichomes. Encodes the DNA topoisomerase VI SPO11-3, involved in endoreduplication ROOT HAIRLESS 2 (RHL2)","protein_coding" "GSVIVT01025552001","No alias","Vitis vinifera","30.2.1 signalling.receptor kinases.leucine rich repeat I Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01025605001","No alias","Vitis vinifera","29.4 protein.postranslational modification a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast. FUS3-complementing gene 1 (FC1)","protein_coding" "GSVIVT01025610001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01025619001","No alias","Vitis vinifera","30.5 signalling.G-proteins small GTP-binding protein (ara-3) ARA3","protein_coding" "GSVIVT01025638001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation GTP binding Elongation factor Tu family protein","protein_coding" "GSVIVT01025641001","No alias","Vitis vinifera","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01025676001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Protein kinase superfamily protein","protein_coding" "GSVIVT01025705001","No alias","Vitis vinifera","29.4 protein.postranslational modification TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01025712001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 12 (NAP12)","protein_coding" "GSVIVT01025716001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "GSVIVT01025723001","No alias","Vitis vinifera","31.2 cell.division ATPase, AAA-type, CDC48 protein","protein_coding" "GSVIVT01025745001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes CDPK-related kinase 1 (CRK1). CDPK-related kinase 1 (CRK1)","protein_coding" "GSVIVT01025773001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors DNA/RNA helicase protein","protein_coding" "GSVIVT01025783001","No alias","Vitis vinifera","30.3 signalling.calcium encodes a protein similar to ATPases and binds to calmodulin in vitro. This is a single-copy gene and is expressed in all tissues examined. Cam interacting protein 111 (CIP111)","protein_coding" "GSVIVT01025802001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01025806001","No alias","Vitis vinifera","29.4.1 protein.postranslational modification.kinase encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase SNF1 kinase homolog 10 (KIN10)","protein_coding" "GSVIVT01025870001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01025877001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01025896001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ABC2 homolog 6 (ATH6)","protein_coding" "GSVIVT01025900001","No alias","Vitis vinifera","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2 (OPR2)","protein_coding" "GSVIVT01025902001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ABC2 homolog 7 (ATH7)","protein_coding" "GSVIVT01025918001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01025922001","No alias","Vitis vinifera","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 1 (OPR1)","protein_coding" "GSVIVT01025923001","No alias","Vitis vinifera","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2 (OPR2)","protein_coding" "GSVIVT01025924001","No alias","Vitis vinifera","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2 (OPR2)","protein_coding" "GSVIVT01025925001","No alias","Vitis vinifera","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2 (OPR2)","protein_coding" "GSVIVT01025926001","No alias","Vitis vinifera","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2 (OPR2)","protein_coding" "GSVIVT01025929001","No alias","Vitis vinifera","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2 (OPR2)","protein_coding" "GSVIVT01025930001","No alias","Vitis vinifera","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 1 (OPR1)","protein_coding" "GSVIVT01025937001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01025947001","No alias","Vitis vinifera","20.1 stress.biotic P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01025950001","No alias","Vitis vinifera","26.1 misc.misc2 D-isomer specific 2-hydroxyacid dehydrogenase family protein","protein_coding" "GSVIVT01025958001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01025968001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01026000001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Leucine-rich receptor-like protein kinase family protein","protein_coding" "GSVIVT01026001001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01026003001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01026007001","No alias","Vitis vinifera","30.2.26 signalling.receptor kinases.crinkly like CRINKLY4 related 4 (CCR4)","protein_coding" "GSVIVT01026021001","No alias","Vitis vinifera","30.2.19 signalling.receptor kinases.legume-lectin Concanavalin A-like lectin protein kinase family protein","protein_coding" "GSVIVT01026092001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026099001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01026124001","No alias","Vitis vinifera","30.2.25 signalling.receptor kinases.wall associated kinase encodes a wall-associated kinase wall associated kinase 5 (WAK5)","protein_coding" "GSVIVT01026152001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026159001","No alias","Vitis vinifera","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI member of Myosin-like proteins myosin XI A (XIA)","protein_coding" "GSVIVT01026162001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026185001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01026269001","No alias","Vitis vinifera","29.2.3 protein.synthesis.initiation protein synthesis initiation factor eIF2 gamma eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA)","protein_coding" "GSVIVT01026300001","No alias","Vitis vinifera","30.2.9 signalling.receptor kinases.leucine rich repeat IX receptor-like transmembrane kinase I (TMK1) transmembrane kinase 1 (TMK1)","protein_coding" "GSVIVT01026378001","No alias","Vitis vinifera","16.4.1 secondary metabolism.N misc.alkaloid-like Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "GSVIVT01026384001","No alias","Vitis vinifera","16.4.1 secondary metabolism.N misc.alkaloid-like Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "GSVIVT01026388001","No alias","Vitis vinifera","16.4.1 secondary metabolism.N misc.alkaloid-like Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "GSVIVT01026400001","No alias","Vitis vinifera","30.2.8.1 signalling.receptor kinases.leucine rich repeat VIII.VIII-1 Receptor-like kinase required for maintenance of pollen tube growth. Display polar localization at the plasma membrane of the pollen tube tip. ANXUR2 (ANX2)","protein_coding" "GSVIVT01026440001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a nuclear localized serine/threonine phosphatase that appears to be regulated by redox activity and is a positive regulator of cryptochrome mediated blue light signalling. serine/threonine phosphatase 7 (PP7)","protein_coding" "GSVIVT01026450001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling 24 (CHR24)","protein_coding" "GSVIVT01026455001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure EMBRYO DEFECTIVE 2780 (EMB2780)","protein_coding" "GSVIVT01026462001","No alias","Vitis vinifera","29.4.1.56 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "GSVIVT01026484001","No alias","Vitis vinifera","34.11 transport.NDP-sugars at the ER Encodes a Golgi-localized GDP-mannose transporter. golgi nucleotide sugar transporter 1 (GONST1)","protein_coding" "GSVIVT01026487001","No alias","Vitis vinifera","30.6 signalling.MAP kinases MEK kinase (MAP3Ka) mitogen-activated protein kinase kinase kinase 3 (MAP3KA)","protein_coding" "GSVIVT01026499001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "GSVIVT01026546001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01026547001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a receptor-like protein kinase. receptor-like protein kinase 1 (RLK1)","protein_coding" "GSVIVT01026551001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a receptor-like protein kinase. receptor-like protein kinase 1 (RLK1)","protein_coding" "GSVIVT01026571001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a receptor-like protein kinase. receptor-like protein kinase 1 (RLK1)","protein_coding" "GSVIVT01026573001","No alias","Vitis vinifera","29.4.1 protein.postranslational modification.kinase protein kinase family protein","protein_coding" "GSVIVT01026621001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "GSVIVT01026626001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "GSVIVT01026627001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "GSVIVT01026635001","No alias","Vitis vinifera","28.2 DNA.repair DNA mismatch repair protein similar to MutL. Required for normal levels of meiotic crossovers MUTL protein homolog 3 (MLH3)","protein_coding" "GSVIVT01026677001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "GSVIVT01026700001","No alias","Vitis vinifera","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "GSVIVT01026715001","No alias","Vitis vinifera","28.2 DNA.repair Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization. MUTL-homologue 1 (MLH1)","protein_coding" "GSVIVT01026725001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026728001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01026740001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026742001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026745001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026747001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026750001","No alias","Vitis vinifera","20.1 stress.biotic Confers resistance to Peronospora parasitica. In arabidopsis ecotype Dijon-17, HRT-mediated signaling is dependent on light for the induction of hypersensitive response and resistance to turnip crinkle virus. RECOGNITION OF PERONOSPORA PARASITICA 8 (RPP8)","protein_coding" "GSVIVT01026820001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026824001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01026825001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026866001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure RNAhelicase-like 8 (RH8)","protein_coding" "GSVIVT01026899001","No alias","Vitis vinifera","31.1 cell.organisation Integrin-linked protein kinase family","protein_coding" "GSVIVT01026903001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026910001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01026936001","No alias","Vitis vinifera","29.4.1.59 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX U-box domain-containing protein kinase family protein","protein_coding" "GSVIVT01026952001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D. BRAHMA (BRM)","protein_coding" "GSVIVT01026959001","No alias","Vitis vinifera","27.3.34 RNA.regulation of transcription.Orphan family Encodes a homolog of human CtBP. Mutant has longer and thicker leaves than wild type. Involved in controlling polar cell expansion in the leaf width direction. ANGUSTIFOLIA (AN)","protein_coding" "GSVIVT01026962001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01026982001","No alias","Vitis vinifera","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "GSVIVT01026984001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Encodes a nuclear and cytoplasmically localized MAP kinase involved in mediating responses to pathogens. Its substrates include MKS1 and probably MAP65-1.The MAP65-1 interaction is involved in mediating cortical microtuble organization. MAP kinase 4 (MPK4)","protein_coding" "GSVIVT01027001001","No alias","Vitis vinifera","29.4.1.54 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IV high overall homology to CRCK1 calmodulin-binding receptor-like cytoplasmic kinase 2 (CRCK2)","protein_coding" "GSVIVT01027054001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01027084001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01027147001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis. dynamin-like protein (DL1)","protein_coding" "GSVIVT01027181001","No alias","Vitis vinifera","18 Co-factor and vitamine metabolism Pyridoxamine 5'-phosphate oxidase family protein","protein_coding" "GSVIVT01027189001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01027223001","No alias","Vitis vinifera","35.2 not assigned.unknown Uncharacterized protein family (UPF0016)","protein_coding" "GSVIVT01027229001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01027243001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01027276001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01027314001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure DNA GYRASE A (GYRA)","protein_coding" "GSVIVT01027315001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure DNA GYRASE A (GYRA)","protein_coding" "GSVIVT01027396001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog A3 (RABA3)","protein_coding" "GSVIVT01027397001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01027409001","No alias","Vitis vinifera","30.3 signalling.calcium CDPK-related kinase 3 (CRK3)","protein_coding" "GSVIVT01027458001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01027497001","No alias","Vitis vinifera","29.3.3 protein.targeting.chloroplast chloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids. CPFTSY","protein_coding" "GSVIVT01027506001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway. shaggy-like protein kinase 32 (SK32)","protein_coding" "GSVIVT01027536001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01027537001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "GSVIVT01027564001","No alias","Vitis vinifera","29.4.1.61 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X Protein kinase superfamily protein","protein_coding" "GSVIVT01027718001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01027728001","No alias","Vitis vinifera","28.2 DNA.repair Helicase protein with RING/U-box domain","protein_coding" "GSVIVT01027804001","No alias","Vitis vinifera","4.1.16 glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. phosphoenolpyruvate carboxylase kinase 1 (PPCK1)","protein_coding" "GSVIVT01027831001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01027832001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01027833001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01027835001","No alias","Vitis vinifera","29.4 protein.postranslational modification Phosphorylates serine or threonine residues that are near and C-terminal to acidic side chains on a variety of target proteins casein kinase I (CKI1)","protein_coding" "GSVIVT01027850001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01027855001","No alias","Vitis vinifera","11.9 lipid metabolism.lipid degradation Encodes a fatty alcohol oxidase. fatty alcohol oxidase 3 (FAO3)","protein_coding" "GSVIVT01027931001","No alias","Vitis vinifera","28.2 DNA.repair Promotes re-arrangements of mitochondrial genome. Mutations affects mitochondrial gene expression, and impairs mitochondrial function. Dual targeting of the protein to mitochondria and chloroplasts caused by alternative translation initiation. MUTL protein homolog 1 (MSH1)","protein_coding" "GSVIVT01027957001","No alias","Vitis vinifera","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01027965001","No alias","Vitis vinifera","18.4.9 Co-factor and vitamine metabolism.pantothenate.dephospho-CoA kinase (DPCK) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA. ATCOAE","protein_coding" "GSVIVT01027981001","No alias","Vitis vinifera","29.3.3 protein.targeting.chloroplast An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. translocon at the outer envelope membrane of chloroplasts 159 (TOC159)","protein_coding" "GSVIVT01027983001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "GSVIVT01027984001","No alias","Vitis vinifera","18.2.1 Co-factor and vitamine metabolism.thiamine.thiamine diphosphokinase Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine. thiamin pyrophosphokinase1 (TPK1)","protein_coding" "GSVIVT01027985001","No alias","Vitis vinifera","28.2 DNA.repair Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination. POSTMEIOTIC SEGREGATION 1 (PMS1)","protein_coding" "GSVIVT01027990001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 10 (MRP10)","protein_coding" "GSVIVT01027995001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01028054001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01028062001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01028080001","No alias","Vitis vinifera","16.2 secondary metabolism.phenylpropanoids Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "GSVIVT01028107001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01028112001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01028118001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin. PROLIFERA (PRL)","protein_coding" "GSVIVT01028135001","No alias","Vitis vinifera","30.2.18 signalling.receptor kinases.extensin Protein kinase superfamily protein","protein_coding" "GSVIVT01028137001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01028153001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase RNA helicase family protein","protein_coding" "GSVIVT01028179001","No alias","Vitis vinifera","29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1E (ARFA1E)","protein_coding" "GSVIVT01028190001","No alias","Vitis vinifera","29.4 protein.postranslational modification encodes a SHAGGY-related kinase involved in meristem organization. shaggy-related kinase 11 (SK 11)","protein_coding" "GSVIVT01028218001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. pleiotropic drug resistance 9 (PDR9)","protein_coding" "GSVIVT01028249001","No alias","Vitis vinifera","29.3.3 protein.targeting.chloroplast Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression. Albino or Glassy Yellow 1 (AGY1)","protein_coding" "GSVIVT01028250001","No alias","Vitis vinifera","29.1.40 protein.aa activation.bifunctional aminoacyl-tRNA synthetase Class II aaRS and biotin synthetases superfamily protein","protein_coding" "GSVIVT01028256001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 5 (PGP5)","protein_coding" "GSVIVT01028343001","No alias","Vitis vinifera","31.2 cell.division Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. TITAN8 (TTN8)","protein_coding" "GSVIVT01028359001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling 8 (CHR8)","protein_coding" "GSVIVT01028360001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01028361001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01028363001","No alias","Vitis vinifera","29.4 protein.postranslational modification Phosphorylates serine or threonine residues that are near and C-terminal to acidic side chains on a variety of target proteins casein kinase I (CKI1)","protein_coding" "GSVIVT01028396001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01028398001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01028400001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01028433001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "GSVIVT01028440001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C. multidrug resistance-associated protein 5 (MRP5)","protein_coding" "GSVIVT01028441001","No alias","Vitis vinifera","16.4.1 secondary metabolism.N misc.alkaloid-like Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "GSVIVT01028457001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C. multidrug resistance-associated protein 5 (MRP5)","protein_coding" "GSVIVT01028458001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C. multidrug resistance-associated protein 5 (MRP5)","protein_coding" "GSVIVT01028459001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C. multidrug resistance-associated protein 5 (MRP5)","protein_coding" "GSVIVT01028469001","No alias","Vitis vinifera","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes a member of the type XI myosin protein family that binds F-actin and co-localizes with actin filaments and peroxisomes. Homozygous mutants are reported to have pleiotropic effects in growth and fertility and may also be lethal. This protein is also involved in root hair growth and organelle trafficking. This protein interacts with RabC2a and RabD1 in a GTP-dependent manner. myosin 2 (MYA2)","protein_coding" "GSVIVT01028471001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Auxin biosynthetic gene regulated by RVE1. Overexpression leads to suppression of bri1 phenotype. YUCCA 8 (YUC8)","protein_coding" "GSVIVT01028520001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01028580001","No alias","Vitis vinifera","17.3.1.2.8 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.DWF1 Involved in the conversion of the early brassinosteroid precursor 24-methylenecholesterol to campesterol. Brassinosteroids affect cellular elongation. Mutants have dwarf phenotype. DWF1 is a Ca2+-dependent calmodulin-binding protein. DWARF 1 (DWF1)","protein_coding" "GSVIVT01028584001","No alias","Vitis vinifera","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus GTP-binding family protein","protein_coding" "GSVIVT01028586001","No alias","Vitis vinifera","17.4.1 hormone metabolism.cytokinin.synthesis-degradation It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 3 (CKX3)","protein_coding" "GSVIVT01028598001","No alias","Vitis vinifera","17.4.1 hormone metabolism.cytokinin.synthesis-degradation It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 4 (CKX4)","protein_coding" "GSVIVT01028599001","No alias","Vitis vinifera","17.4.1 hormone metabolism.cytokinin.synthesis-degradation It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 3 (CKX3)","protein_coding" "GSVIVT01028610001","No alias","Vitis vinifera","17.4.1 hormone metabolism.cytokinin.synthesis-degradation It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 3 (CKX3)","protein_coding" "GSVIVT01028626001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01028627001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01028629001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01028632001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01028653001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "GSVIVT01028703001","No alias","Vitis vinifera","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the chloroplast and the mitochondrion FTSH protease 11 (FTSH11)","protein_coding" "GSVIVT01028720001","No alias","Vitis vinifera","25.8 C1-metabolism.tetrahydrofolate synthase Encodes a dihydrofolate synthetase based on yeast complementation experiments. This protein is involved in folate biosynthesis. GLOBULAR ARREST1 (GLA1)","protein_coding" "GSVIVT01028722001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 14 (MRP14)","protein_coding" "GSVIVT01028727001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01028744001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 14 (MRP14)","protein_coding" "GSVIVT01028768001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01028779001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like Protein kinase superfamily protein","protein_coding" "GSVIVT01028785001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like Protein kinase superfamily protein","protein_coding" "GSVIVT01028787001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like Protein kinase superfamily protein","protein_coding" "GSVIVT01028790001","No alias","Vitis vinifera","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01028791001","No alias","Vitis vinifera","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01028792001","No alias","Vitis vinifera","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01028856001","No alias","Vitis vinifera","20.2.1 stress.abiotic.heat Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance. heat shock protein 90.1 (HSP90.1)","protein_coding" "GSVIVT01028865001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01028877001","No alias","Vitis vinifera","29.1.40 protein.aa activation.bifunctional aminoacyl-tRNA synthetase OVULE ABORTION 6 (OVA6)","protein_coding" "GSVIVT01028897001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality. YODA (YDA)","protein_coding" "GSVIVT01028909001","No alias","Vitis vinifera","29.4.1.59 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX U-box domain-containing protein kinase family protein","protein_coding" "GSVIVT01028911001","No alias","Vitis vinifera","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "GSVIVT01028990001","No alias","Vitis vinifera","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI member of Myosin-like proteins myosin XI A (XIA)","protein_coding" "GSVIVT01028991001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc YUCCA 3 (YUC3)","protein_coding" "GSVIVT01029005001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01029009001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01029013001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01029025001","No alias","Vitis vinifera","29.6 protein.folding mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria. heat shock protein 60 (HSP60)","protein_coding" "GSVIVT01029038001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01029113001","No alias","Vitis vinifera","29.4 protein.postranslational modification GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner ADP-ribosylation factor 3 (ARF3)","protein_coding" "GSVIVT01029116001","No alias","Vitis vinifera","29.4 protein.postranslational modification CBL-interacting protein kinase CBL-interacting protein kinase 21 (CIPK21)","protein_coding" "GSVIVT01029119001","No alias","Vitis vinifera","29.8 protein.assembly and cofactor ligation hypothetical protein YCF2.2","protein_coding" "GSVIVT01029151001","No alias","Vitis vinifera","18.6.2 Co-factor and vitamine metabolism.biotin.Diaminopelargonic acid aminotransferase and dethiobiotin synthetase Mutant complemented by E coli Bio A gene encoding 7,8-diaminopelargonic acid aminotransferase. biotin auxotroph 1 (BIO1)","protein_coding" "GSVIVT01029202001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01029233001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01029255001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 3 (NAP3)","protein_coding" "GSVIVT01029279001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01029290001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01029438001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01029545001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01029605001","No alias","Vitis vinifera","29.8 protein.assembly and cofactor ligation hypothetical protein YCF2.2","protein_coding" "GSVIVT01029718001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01029736001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ABC2 homolog 7 (ATH7)","protein_coding" "GSVIVT01029761001","No alias","Vitis vinifera","13.1.6.2 amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine AGD2-like defense response protein 1 (ALD1)","protein_coding" "GSVIVT01029797001","No alias","Vitis vinifera","17.3.2.99 hormone metabolism.brassinosteroid.signal transduction.other Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1-associated receptor kinase (BAK1)","protein_coding" "GSVIVT01029816001","No alias","Vitis vinifera","17.3.2.99 hormone metabolism.brassinosteroid.signal transduction.other Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1-associated receptor kinase (BAK1)","protein_coding" "GSVIVT01029821001","No alias","Vitis vinifera","29.1.11 protein.aa activation.serine-tRNA ligase Seryl-tRNA synthetase targeted to chloroplasts and mitochondria. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. Seryl-tRNA synthetase (SRS)","protein_coding" "GSVIVT01029835001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "GSVIVT01029843001","No alias","Vitis vinifera","31.2 cell.division Encodes a member of a plant specific family of cyclin dependent kinases. cyclin-dependent kinase B12 (CDKB12)","protein_coding" "GSVIVT01029870001","No alias","Vitis vinifera","30.2.8.1 signalling.receptor kinases.leucine rich repeat VIII.VIII-1 Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01029905001","No alias","Vitis vinifera","29.6 protein.folding embryo defective 1241 (EMB1241)","protein_coding" "GSVIVT01029950001","No alias","Vitis vinifera","30.2.6 signalling.receptor kinases.leucine rich repeat VI Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01030033001","No alias","Vitis vinifera","29.1.3 protein.aa activation.threonine-tRNA ligase Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage. EMBRYO DEFECTIVE 2761 (EMB2761)","protein_coding" "GSVIVT01030042001","No alias","Vitis vinifera","23.3.2.3 nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase Thymidine kinase","protein_coding" "GSVIVT01030044001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01030056001","No alias","Vitis vinifera","20.2.1 stress.abiotic.heat HEAT SHOCK PROTEIN 89.1 (Hsp89.1)","protein_coding" "GSVIVT01030086001","No alias","Vitis vinifera","7.1.1 OPP.oxidative PP.G6PD Encodes a plastidic glucose-6-phosphate dehydrogenase that is sensitive to reduction by DTT and whose mRNA is more prevalent in developing organs but absent in the root. glucose-6-phosphate dehydrogenase 1 (G6PD1)","protein_coding" "GSVIVT01030098001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01030140001","No alias","Vitis vinifera","30.5 signalling.G-proteins member of RAB gene family RAB GTPase homolog B1C (RABB1C)","protein_coding" "GSVIVT01030166001","No alias","Vitis vinifera","29.4 protein.postranslational modification Chloroplast thylakoid protein kinase STN8 is specific in phosphorylation of N-terminal threonine residues in D1, D2 and CP43 proteins, and Thr-4 in PsbH protein of photosystem II. Phosphorylation of Thr-4 in the wild type required both light and prior phosphorylation at Thr-2. STN8","protein_coding" "GSVIVT01030167001","No alias","Vitis vinifera","29.2.2 protein.synthesis.ribosome biogenesis Encodes a ribosomal-protein S6 kinase. Gene expression is induced by cold and salt (NaCl). Activation of AtS6k is regulated by 1-naphthylacetic acid and kinetin, at least in part, via a lipid kinase-dependent pathway. Phosphorylates specifically mammalian and plant S6 at 25 degrees C but not at 37 degrees C. Involved in translational up-regulation of ribosomal proteins. Arabidopsis thaliana protein kinase 19 (ATPK19)","protein_coding" "GSVIVT01030202001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01030206001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a CBL-interacting serine/threonine protein kinase. serine/threonine protein kinase 1 (SR1)","protein_coding" "GSVIVT01030218001","No alias","Vitis vinifera","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase ASPARTATE AMINOTRANSFERASE 1 aspartate aminotransferase 1 (ASP1)","protein_coding" "GSVIVT01030227001","No alias","Vitis vinifera","13.2.4.1 amino acid metabolism.degradation.branched chain group.shared Encodes a protein that is predicted to have beta-alanine aminotransferase activity. PYRIMIDINE 4 (PYD4)","protein_coding" "GSVIVT01030275001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01030310001","No alias","Vitis vinifera","29.4 protein.postranslational modification Concanavalin A-like lectin protein kinase family protein","protein_coding" "GSVIVT01030354001","No alias","Vitis vinifera","16.1.3 secondary metabolism.isoprenoids.tocopherol biosynthesis Tyrosine transaminase family protein","protein_coding" "GSVIVT01030444001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Helicase protein with RING/U-box domain","protein_coding" "GSVIVT01030452001","No alias","Vitis vinifera","31.2 cell.division member of MEKK subfamily mitogen-activated protein kinase kinase kinase 16 (MAPKKK16)","protein_coding" "GSVIVT01030573001","No alias","Vitis vinifera","35.1 not assigned.no ontology transferasesfolic acid binding","protein_coding" "GSVIVT01030574001","No alias","Vitis vinifera","35.1 not assigned.no ontology transferasesfolic acid binding","protein_coding" "GSVIVT01030602001","No alias","Vitis vinifera","30.1 signalling.in sugar and nutrient physiology member of Putative ligand-gated ion channel subunit family glutamate receptor 3.4 (GLR3.4)","protein_coding" "GSVIVT01030775001","No alias","Vitis vinifera","29.1.9 protein.aa activation.valine-tRNA ligase embryo defective 2247 (EMB2247)","protein_coding" "GSVIVT01030776001","No alias","Vitis vinifera","29.1.9 protein.aa activation.valine-tRNA ligase embryo defective 2247 (EMB2247)","protein_coding" "GSVIVT01030794001","No alias","Vitis vinifera","29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases. ADP-ribosylation factor-like A1A (ARLA1A)","protein_coding" "GSVIVT01030840001","No alias","Vitis vinifera","29.4.1.56 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VI Protein kinase superfamily protein","protein_coding" "GSVIVT01030942001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Encodes a novel plant specific DNA ligase that is involved in seed germination and DNA repair. DNA LIGASE 6 (LIG6)","protein_coding" "GSVIVT01030947001","No alias","Vitis vinifera","5.2 fermentation.PDC Thiamine pyrophosphate dependent pyruvate decarboxylase family protein","protein_coding" "GSVIVT01030948001","No alias","Vitis vinifera","5.2 fermentation.PDC Thiamine pyrophosphate dependent pyruvate decarboxylase family protein","protein_coding" "GSVIVT01030954001","No alias","Vitis vinifera","31.2 cell.division CDK-activating kinase 4 (CAK4)","protein_coding" "GSVIVT01031022001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01031067001","No alias","Vitis vinifera","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01031116001","No alias","Vitis vinifera","11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein Acyl-CoA binding protein with high affinity for oleoyl-CoA. Expressed in all plant organs. Involved in fatty acid transport. acyl-CoA binding protein 4 (ACBP4)","protein_coding" "GSVIVT01031124001","No alias","Vitis vinifera","29.1.6 protein.aa activation.lysine-tRNA ligase lysyl-tRNA synthetase 1 (ATKRS-1)","protein_coding" "GSVIVT01031137001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01031142001","No alias","Vitis vinifera","29.2.3 protein.synthesis.initiation Translation initiation factor 2, small GTP-binding protein","protein_coding" "GSVIVT01031197001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01031213001","No alias","Vitis vinifera","28.99 DNA.unspecified RECQ helicase l1 (RECQI1)","protein_coding" "GSVIVT01031224001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01031236001","No alias","Vitis vinifera","29.5.5 protein.degradation.serine protease Encodes a member of the Lon protease-like proteins (Lon1/At5g26860, Lon2/At5g47040, Lon3/At3g05780, Lon4/At3g05790). Lon is a multifunctional ATP-dependent protease which exists in bacteria, archaea and within organelles in eukaryotic cells. Lon proteases are responsible for the degradation of abnormal, damaged and unstable proteins. lon protease 1 (LON1)","protein_coding" "GSVIVT01031286001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 9 (NAP9)","protein_coding" "GSVIVT01031289001","No alias","Vitis vinifera","33.99 development.unspecified nodulin MtN21 /EamA-like transporter family protein","protein_coding" "GSVIVT01031295001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01031301001","No alias","Vitis vinifera","29.4 protein.postranslational modification encodes a SHAGGY-related kinase involved in meristem organization. shaggy-related kinase 11 (SK 11)","protein_coding" "GSVIVT01031314001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems Negative regulator of auxin polar transport inhibitors. ABCG37 regulates auxin distribution and homeostasis in roots by excluding IBA from the root apex, but does not act directly in basipetal transport. ABCG37 and ABCG36 act redundantly at outermost root plasma membranes and, transport IBA out of the cells. pleiotropic drug resistance 9 (PDR9)","protein_coding" "GSVIVT01031315001","No alias","Vitis vinifera","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "GSVIVT01031352001","No alias","Vitis vinifera","29.1.17 protein.aa activation.glutamate-tRNA ligase Glutamyl/glutaminyl-tRNA synthetase, class Ic","protein_coding" "GSVIVT01031353001","No alias","Vitis vinifera","29.1.17 protein.aa activation.glutamate-tRNA ligase Glutamyl/glutaminyl-tRNA synthetase, class Ic","protein_coding" "GSVIVT01031360001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase embryo defective 1138 (emb1138)","protein_coding" "GSVIVT01031370001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01031372001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01031378001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 11 (PDR11)","protein_coding" "GSVIVT01031410001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01031427001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01031505001","No alias","Vitis vinifera","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus member of GCN subfamily GENERAL CONTROL NON-REPRESSIBLE 1 (GCN1)","protein_coding" "GSVIVT01031516001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "GSVIVT01031517001","No alias","Vitis vinifera","31.2 cell.division ATPase, AAA-type, CDC48 protein","protein_coding" "GSVIVT01031526001","No alias","Vitis vinifera","1.3.13 PS.calvin cycle.rubisco interacting Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. chaperonin-60alpha (CPN60A)","protein_coding" "GSVIVT01031535001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01031551001","No alias","Vitis vinifera","2.2.1.4 major CHO metabolism.degradation.sucrose.hexokinase hexokinase-like 1 (HKL1)","protein_coding" "GSVIVT01031612001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01031618001","No alias","Vitis vinifera","30.2.9 signalling.receptor kinases.leucine rich repeat IX Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01031641001","No alias","Vitis vinifera","16.1.3 secondary metabolism.isoprenoids.tocopherol biosynthesis Tyrosine transaminase family protein","protein_coding" "GSVIVT01031661001","No alias","Vitis vinifera","30.2.10 signalling.receptor kinases.leucine rich repeat X Encodes EMS1 (EXCESS MICROSPOROCYTES1), a putative leucine-rich repeat receptor protein kinase that controls somatic and reproductive cell fates in Arabidopsis anther. EXCESS MICROSPOROCYTES1 (EMS1)","protein_coding" "GSVIVT01031722001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc Protein kinase superfamily protein","protein_coding" "GSVIVT01031756001","No alias","Vitis vinifera","28.2 DNA.repair Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination. homolog of RAD54 (RAD54)","protein_coding" "GSVIVT01031789001","No alias","Vitis vinifera","29.4 protein.postranslational modification CDPK-related kinase CDPK-related kinase (CRK)","protein_coding" "GSVIVT01031806001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01031809001","No alias","Vitis vinifera","31.1 cell.organisation PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1 both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. phragmoplast orienting kinesin 2 (POK2)","protein_coding" "GSVIVT01031881001","No alias","Vitis vinifera","30.5 signalling.G-proteins encodes a novel G-alpha protein that shares similarity to plant, yeast, and animal G-alpha proteins at the C-terminus. It","protein_coding" "GSVIVT01031953001","No alias","Vitis vinifera","30.5 signalling.G-proteins RAB GTPase homolog G3F (RAB7B)","protein_coding" "GSVIVT01031962001","No alias","Vitis vinifera","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "GSVIVT01031967001","No alias","Vitis vinifera","29.1.20 protein.aa activation.phenylalanine-tRNA ligase phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative","protein_coding" "GSVIVT01031992001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01031998001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01032000001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032054001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes a small molecular weight g-protein. RAB GTPase homolog A4C (RABA4C)","protein_coding" "GSVIVT01032128001","No alias","Vitis vinifera","35.1 not assigned.no ontology FMN-linked oxidoreductases superfamily protein","protein_coding" "GSVIVT01032138001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues. topoisomerase II (TOPII)","protein_coding" "GSVIVT01032139001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032141001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032169001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032171001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032180001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032183001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032189001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032199001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032204001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032210001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032223001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling 8 (CHR8)","protein_coding" "GSVIVT01032232001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01032247001","No alias","Vitis vinifera","20.2.1 stress.abiotic.heat Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01032250001","No alias","Vitis vinifera","10.1.30.2 ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase Similar to galactokinase. arabinose kinase (ARA1)","protein_coding" "GSVIVT01032257001","No alias","Vitis vinifera","11.1.1.2.4 lipid metabolism.FA synthesis and FA elongation.Acetyl CoA Carboxylation.heteromeric Complex.Biotin Carboxylase Encodes biotin carboxylase subunit (CAC2). acetyl Co-enzyme a carboxylase biotin carboxylase subunit (CAC2)","protein_coding" "GSVIVT01032335001","No alias","Vitis vinifera","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases DEA(D/H)-box RNA helicase family protein","protein_coding" "GSVIVT01032366001","No alias","Vitis vinifera","30.5 signalling.G-proteins GTP-binding protein ATGB2 GTP-binding 2 (GB2)","protein_coding" "GSVIVT01032376001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01032385001","No alias","Vitis vinifera","10.1.30.3 cell wall.precursor synthesis.sugar kinases.glucuronic acid kinase AtGlcAK is a sugar kinase able to phosphorylate D-GlcA to D-GlcA-1-phosphate in the presence of ATP. glucuronokinase G (GLCAK)","protein_coding" "GSVIVT01032399001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01032404001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of TAP subfamily transporter associated with antigen processing protein 1 (TAP1)","protein_coding" "GSVIVT01032414001","No alias","Vitis vinifera","30.6 signalling.MAP kinases encodes a mitogen-activated protein kinase kinase mitogen-activated protein kinase kinase 3 (MKK3)","protein_coding" "GSVIVT01032433001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure DNA helicase required for interference-sensitive meiotic crossover events. ROCK-N-ROLLERS (RCK)","protein_coding" "GSVIVT01032442001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase RNA HELICASE DRH1 DEAD box RNA helicase 1 (DRH1)","protein_coding" "GSVIVT01032446001","No alias","Vitis vinifera","29.4 protein.postranslational modification shaggy-like kinase 13 (SK13)","protein_coding" "GSVIVT01032451001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01032461001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01032479001","No alias","Vitis vinifera","25.10 C1-metabolism.formate dehydrogenase Encodes a NAD-dependent formate dehydrogenase. formate dehydrogenase (FDH)","protein_coding" "GSVIVT01032499001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01032552001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01032553001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01032554001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type AAA-ATPase 1 (AATP1)","protein_coding" "GSVIVT01032557001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type AAA-ATPase 1 (AATP1)","protein_coding" "GSVIVT01032561001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01032575001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "GSVIVT01032577001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "GSVIVT01032578001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "GSVIVT01032589001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01032657001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors zinc ion bindingDNA bindinghelicasesATP bindingnucleic acid binding","protein_coding" "GSVIVT01032663001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase family protein with ARM repeat domain","protein_coding" "GSVIVT01032708001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a CBL-interacting protein kinase with similarity to SOS protein kinase. SOS3-interacting protein 1 (SIP1)","protein_coding" "GSVIVT01032746001","No alias","Vitis vinifera","28.99 DNA.unspecified Encodes a nuclear localized SNF domain containing protein involved in RNA silencing. Mutants were identified in a screen for defects in the spread of RNA silencing. CLSY1 may affect production of dsRNA from the locus to be silenced. chromatin remodeling 38 (CHR38)","protein_coding" "GSVIVT01032750001","No alias","Vitis vinifera","29.2.2.2.1 protein.synthesis.ribosome biogenesis.Assembly factors.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01032814001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01032824001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032825001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032827001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032828001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032830001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01032848001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01032898001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems Encodes a member of TAP subfamily of ABC transporters that is located in the vacuole. Mutants are hypersensitive to aluminum and the gene product may be important for intracellular movement of some substrate, possibly chelated Al, as part of a mechanism of aluminum sequestration. transporter associated with antigen processing protein 2 (TAP2)","protein_coding" "GSVIVT01033000001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01033008001","No alias","Vitis vinifera","11.8.1.2 lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. long chain base2 (LCB2)","protein_coding" "GSVIVT01033037001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase. avrPphB susceptible 1 (PBS1)","protein_coding" "GSVIVT01033060001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily non-intrinsic ABC protein 14 (NAP14)","protein_coding" "GSVIVT01033088001","No alias","Vitis vinifera","13.1.4.1.1 amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1 (CSR1)","protein_coding" "GSVIVT01033101001","No alias","Vitis vinifera","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01033181001","No alias","Vitis vinifera","31.2 cell.division Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. TITAN7 (TTN7)","protein_coding" "GSVIVT01033252001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01033255001","No alias","Vitis vinifera","30.5 signalling.G-proteins P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01033258001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ATP-binding cassette A1 (ABCA1)","protein_coding" "GSVIVT01033274001","No alias","Vitis vinifera","30.2.19 signalling.receptor kinases.legume-lectin Concanavalin A-like lectin protein kinase family protein","protein_coding" "GSVIVT01033292001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01033294001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01033306001","No alias","Vitis vinifera","30.3 signalling.calcium Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro calcium-dependent protein kinase 32 (CPK32)","protein_coding" "GSVIVT01033307001","No alias","Vitis vinifera","29.2.4 protein.synthesis.elongation elongation factor family protein","protein_coding" "GSVIVT01033324001","No alias","Vitis vinifera","23.1.2.20 nucleotide metabolism.synthesis.purine.adenylosuccinate synthase encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate) adenylosuccinate synthase (ADSS)","protein_coding" "GSVIVT01033338001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01033352001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01033357001","No alias","Vitis vinifera","30.5 signalling.G-proteins Encodes RABA4D, a member of the Arabidopsis RabA4 subfamily of Rab GTPase proteins. It is transported in exocytic vesicles to the apical tip of pollen tubes where it appears to promote tip growth. Proper localization of RabA4d depends on ROP1, RIC3, and RIC4 activity. RAB GTPase homolog A4D (RABA4D)","protein_coding" "GSVIVT01033394001","No alias","Vitis vinifera","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "GSVIVT01033400001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "GSVIVT01033437001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01033462001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01033490001","No alias","Vitis vinifera","30.2.19 signalling.receptor kinases.legume-lectin Concanavalin A-like lectin protein kinase family protein","protein_coding" "GSVIVT01033511001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes a protein similar to ATP-dependent, chromatin-remodeling proteins of the ISWI and SWI2/SNF2 family. Genetic analyses suggest that this gene is involved in multiple flowering pathways. Mutations in PIE1 results in suppression of FLC-mediated delay of flowering and causes early flowering in noninductive photoperiods independently of FLC. PIE1 is required for expression of FLC in the shoot apex but not in the root.Along with ARP6 forms a complex to deposit modified histone H2A.Z at several loci within the genome. This modification alters the expression of the target genes (i.e. FLC, MAF4, MAF6). PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 (PIE1)","protein_coding" "GSVIVT01033555001","No alias","Vitis vinifera","25.8 C1-metabolism.tetrahydrofolate synthase Encodes a protein with tetrahydrofolylpolyglutamate synthase activity that is located in the mitochondrial matrix. DHFS-FPGS homolog C (DFC)","protein_coding" "GSVIVT01033559001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01033574001","No alias","Vitis vinifera","21.2.1.5 redox.ascorbate and glutathione.ascorbate.L-Galactono-1,4-lactone dehydrogenase L-Galactono-1,4-lactone dehydrogenase, catalyzes the final step of ascorbate biosynthesis "L-galactono-1,4-lactone dehydrogenase" (GLDH)","protein_coding" "GSVIVT01033607001","No alias","Vitis vinifera","13.1.3.4.2 amino acid metabolism.synthesis.aspartate family.methionine.cystathionine beta-lyase Encodes second enzyme in the methionine biosynthetic pathway cystathionine beta-lyase (CBL)","protein_coding" "GSVIVT01033614001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01033639001","No alias","Vitis vinifera","28.2 DNA.repair Protein targeting to mitochondria is influenced by UTR sequences. DNA GYRASE B1 (GYRB1)","protein_coding" "GSVIVT01033645001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01033680001","No alias","Vitis vinifera","30.5 signalling.G-proteins Ras-related small GTP-binding family protein","protein_coding" "GSVIVT01033681001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01033721001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4)","protein_coding" "GSVIVT01033742001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01033800001","No alias","Vitis vinifera","27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower. growth-regulating factor 3 (GRF3)","protein_coding" "GSVIVT01033804001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 11 (PDR11)","protein_coding" "GSVIVT01033816001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01033860001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ABC2 homolog 12 (ATH12)","protein_coding" "GSVIVT01033862001","No alias","Vitis vinifera","29.3.3 protein.targeting.chloroplast mutant has Yellow first leaves Chloroplast Signal Recognition Particle Subunit chloroplast signal recognition particle 54 kDa subunit (CPSRP54)","protein_coding" "GSVIVT01033871001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01033881001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01033956001","No alias","Vitis vinifera","30.2.9 signalling.receptor kinases.leucine rich repeat IX receptor-like transmembrane kinase I (TMK1) transmembrane kinase 1 (TMK1)","protein_coding" "GSVIVT01033977001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01034081001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01034082001","No alias","Vitis vinifera","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "GSVIVT01034089001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01034122001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01034123001","No alias","Vitis vinifera","1.3.13 PS.calvin cycle.rubisco interacting Rubisco activase, a nuclear-encoded chloroplast protein that consists of two isoforms arising from alternative splicing in most plants. Required for the light activation of rubisco. rubisco activase (RCA)","protein_coding" "GSVIVT01034150001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type encodes an FtsH protease that is localized to the mitochondrion FTSH protease 3 (ftsh3)","protein_coding" "GSVIVT01034233001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. SOS3-interacting protein 3 (SIP3)","protein_coding" "GSVIVT01034247001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01034252001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01034308001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type Necessary for sister chromatid cohesion. Acts in synergy with ETG1. CHROMOSOME TRANSMISSION FIDELITY 18 (CTF18)","protein_coding" "GSVIVT01034370001","No alias","Vitis vinifera","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related","protein_coding" "GSVIVT01034376001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type CDC48 - like protein AAA-type ATPaseCell. division control protein 48 homolog B cell division cycle 48B (CDC48B)","protein_coding" "GSVIVT01034378001","No alias","Vitis vinifera","29.5.9 protein.degradation.AAA type CDC48 - like protein AAA-type ATPaseCell. division control protein 48 homolog B cell division cycle 48B (CDC48B)","protein_coding" "GSVIVT01034385001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01034428001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01034429001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01034432001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01034461001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01034463001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems Encodes a plasma membrane localized ABC transporter involved in abscisic acid transport and responses. ATP-binding casette family G25 (ABCG25)","protein_coding" "GSVIVT01034489001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01034493001","No alias","Vitis vinifera","30.2.10 signalling.receptor kinases.leucine rich repeat X leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "GSVIVT01034496001","No alias","Vitis vinifera","13.1.7.7 amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal. histidinol phosphate aminotransferase 1 (HPA1)","protein_coding" "GSVIVT01034576001","No alias","Vitis vinifera","29.4.1 protein.postranslational modification.kinase Protein kinase superfamily protein","protein_coding" "GSVIVT01034586001","No alias","Vitis vinifera","16.1.3 secondary metabolism.isoprenoids.tocopherol biosynthesis Tyrosine transaminase family protein","protein_coding" "GSVIVT01034588001","No alias","Vitis vinifera","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus Nucleolar GTP-binding protein","protein_coding" "GSVIVT01034673001","No alias","Vitis vinifera","29.4 protein.postranslational modification 3-phosphoinositide-dependent protein kinase","protein_coding" "GSVIVT01034675001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01034691001","No alias","Vitis vinifera","29.2.3 protein.synthesis.initiation protein synthesis initiation factor eIF2 gamma eukaryotic translation initiation factor 2 gamma subunit (EIF2 GAMMA)","protein_coding" "GSVIVT01034722001","No alias","Vitis vinifera","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01034723001","No alias","Vitis vinifera","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01034746001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01034755001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01034779001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure DEAD/DEAH box RNA helicase family protein","protein_coding" "GSVIVT01034830001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "GSVIVT01034893001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01034895001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01034903001","No alias","Vitis vinifera","13.2.7 amino acid metabolism.degradation.histidine embryo defective 1075 (emb1075)","protein_coding" "GSVIVT01034906001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 4 (GCN4)","protein_coding" "GSVIVT01034964001","No alias","Vitis vinifera","3.8.1 minor CHO metabolism.galactose.galactokinases Encodes a protein with galactose kinase activity. The gene was shown to complement the yeast Æ’gal1 mutant defective in the galactokinase gene GAL1. GALK","protein_coding" "GSVIVT01035007001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01035025001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01035172001","No alias","Vitis vinifera","10.1.30.1 cell wall.precursor synthesis.sugar kinases.galacturonic acid kinase Encodes a GHMP kinase family protein that acts as a galacturonic acid-1-phosphate kinase that catalyzes the production of galacturonic acid-1-phosphate. This is a precursor of the important cell wall building block UDP-galacturonic acid. Based on gene trap line GT8007, the gene appears to be expressed in a petal and stamen-specific manner, between flower stages 8 to 11, however, later RT-qPCR analysis demonstrates that the transcript is present throughout the plant in all tissues tested. galacturonic acid kinase (GalAK)","protein_coding" "GSVIVT01035188001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01035247001","No alias","Vitis vinifera","13.1.1.1.1 amino acid metabolism.synthesis.central amino acid metabolism.GABA.Glutamate decarboxylase Encodes one of two isoforms of glutamate decarboxylase. glutamate decarboxylase (GAD)","protein_coding" "GSVIVT01035260001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01035267001","No alias","Vitis vinifera","30.5 signalling.G-proteins small GTP binding protein RAB homolog 1 (RHA1)","protein_coding" "GSVIVT01035288001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "GSVIVT01035293001","No alias","Vitis vinifera","29.1 protein.aa activation ovule abortion 4 (OVA4)","protein_coding" "GSVIVT01035303001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01035304001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01035306001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01035307001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01035310001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01035313001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01035315001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01035323001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01035367001","No alias","Vitis vinifera","30.2.11 signalling.receptor kinases.leucine rich repeat XI Protein kinase family protein with leucine-rich repeat domain","protein_coding" "GSVIVT01035373001","No alias","Vitis vinifera","29.2.3 protein.synthesis.initiation eukaryotic translation initiation factor 4A-1 eukaryotic translation initiation factor 4A1 (EIF4A1)","protein_coding" "GSVIVT01035374001","No alias","Vitis vinifera","29.2.3 protein.synthesis.initiation eukaryotic translation initiation factor 4A-1 eukaryotic translation initiation factor 4A1 (EIF4A1)","protein_coding" "GSVIVT01035393001","No alias","Vitis vinifera","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the mitochondrion FTSH protease 4 (ftsh4)","protein_coding" "GSVIVT01035397001","No alias","Vitis vinifera","30.2.3 signalling.receptor kinases.leucine rich repeat III leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "GSVIVT01035414001","No alias","Vitis vinifera","29.4.1.59 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "GSVIVT01035418001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01035446001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01035468001","No alias","Vitis vinifera","17.4.1 hormone metabolism.cytokinin.synthesis-degradation This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 7 (CKX7)","protein_coding" "GSVIVT01035483001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01035505001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FMO1 is required for full expression of TIR-NB-LRRñconditioned resistance to avirulent pathogens and for basal resistance to invasive virulent pathogens. Functions in an EDS1-regulated but SA-independent mechanism that promotes resistance and cell death at pathogen infection sites. flavin-dependent monooxygenase 1 (FMO1)","protein_coding" "GSVIVT01035538001","No alias","Vitis vinifera","34.1 transport.p- and v-ATPases Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology. vacuolar ATP synthase subunit A (VHA-A)","protein_coding" "GSVIVT01035565001","No alias","Vitis vinifera","10.1.30.2 ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase Similar to galactokinase. arabinose kinase (ARA1)","protein_coding" "GSVIVT01035583001","No alias","Vitis vinifera","29.1.12 protein.aa activation.aspartate-tRNA ligase Class II aminoacyl-tRNA and biotin synthetases superfamily protein","protein_coding" "GSVIVT01035650001","No alias","Vitis vinifera","35.1 not assigned.no ontology D-arabinono-1,4-lactone oxidase family protein","protein_coding" "GSVIVT01035662001","No alias","Vitis vinifera","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves. aspartate aminotransferase 3 (ASP3)","protein_coding" "GSVIVT01035676001","No alias","Vitis vinifera","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01035678001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc YUCCA6 (YUC6)","protein_coding" "GSVIVT01035684001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure Encodes a homolog of Drosophila MUS308 and mammalian DNA polymerase, which prevent spontaneous or DNA damage-induced production of DNA double strand breaks. Two conserved functional domains: an N-terminal superfamily II DNA/RNA helicase domain and a C-terminal prokaryotic-type DNA polymerase I domain. Required for regulated cell division and differentiation in meristems. Mutant plants show morphological defects, such as short roots, serrated leaves, and fasciation, as well as defective patterns of cell division and differentiation in the meristem. Mutant plants had 2.5 to 4.5-fold higher expression of ATGR1, ATBRCA1 and RAD51 genes. TEB is required for normal progression of DNA replication and for correct expression of genes during development. helicasesATP-dependent helicasesnucleic acid bindingATP bindingDNA-directed DNA polymerasesDNA binding","protein_coding" "GSVIVT01035713001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01035714001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes protein kinase AME3. AME3","protein_coding" "GSVIVT01035717001","No alias","Vitis vinifera","13.1.6.2 amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "GSVIVT01035767001","No alias","Vitis vinifera","29.5.11.20 protein.degradation.ubiquitin.proteasom 26S proteasome AAA-ATPase subunit regulatory particle triple-A ATPase 6A (RPT6A)","protein_coding" "GSVIVT01035774001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "GSVIVT01035785001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01035786001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "GSVIVT01035788001","No alias","Vitis vinifera","26.7 misc.oxidases - copper, flavone etc Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development. YUCCA4 (YUC4)","protein_coding" "GSVIVT01035804001","No alias","Vitis vinifera","30.5 signalling.G-proteins A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. RAS-related GTP-binding nuclear protein 2 (RAN2)","protein_coding" "GSVIVT01035805001","No alias","Vitis vinifera","30.5 signalling.G-proteins A member of RAN GTPase gene family. Encodes a small soluble GTP-binding protein. Likely to be involved in nuclear translocation of proteins. May also be involved in cell cycle progression. RAN GTPase 3 (RAN3)","protein_coding" "GSVIVT01035836001","No alias","Vitis vinifera","35.1 not assigned.no ontology AFG1-like ATPase family protein","protein_coding" "GSVIVT01035841001","No alias","Vitis vinifera","30.2.21 signalling.receptor kinases.lysine motif protein kinase family protein / peptidoglycan-binding LysM domain-containing protein","protein_coding" "GSVIVT01035843001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure DEAD/DEAH box RNA helicase family protein","protein_coding" "GSVIVT01035900001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01035901001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01035914001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01035915001","No alias","Vitis vinifera","29.4.1.61 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X Protein kinase superfamily protein","protein_coding" "GSVIVT01035951001","No alias","Vitis vinifera","29.1.16 protein.aa activation.cysteine-tRNA ligase SYCO ARATH","protein_coding" "GSVIVT01036006001","No alias","Vitis vinifera","26.17 misc.dynamin Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. dynamin-related protein 3A (DRP3A)","protein_coding" "GSVIVT01036039001","No alias","Vitis vinifera","29.4 protein.postranslational modification GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent manner ADP-ribosylation factor 3 (ARF3)","protein_coding" "GSVIVT01036093001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 9 (PGP9)","protein_coding" "GSVIVT01036113001","No alias","Vitis vinifera","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles. eukaryotic initiation factor 4A-III (EIF4A-III)","protein_coding" "GSVIVT01036115001","No alias","Vitis vinifera","29.1.22 protein.aa activation.asparagine-tRNA ligase Encodes a putative cytosolic asparaginyl-tRNA synthetase. SYNC1","protein_coding" "GSVIVT01036166001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01036184001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 11 (PDR11)","protein_coding" "GSVIVT01036188001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01036191001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01036261001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01036290001","No alias","Vitis vinifera","13.1.3.6.1.10 amino acid metabolism.synthesis.aspartate family.misc.homoserine.bifunctional aspartate kinase/homoserine dehydrogenase Encodes a bifunctional aspartate kinase/homoserine dehydrogenase. These two activities catalyze the first and the third steps toward the synthesis of the essential amino acids threonine, isoleucine and methionine. aspartate kinase-homoserine dehydrogenase i (AK-HSDH I)","protein_coding" "GSVIVT01036295001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01036297001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01036299001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01036304001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01036405001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01036431001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01036435001","No alias","Vitis vinifera","29.1.4 protein.aa activation.leucine-tRNA ligase ATP bindingleucine-tRNA ligasesaminoacyl-tRNA ligasesnucleotide bindingATP bindingaminoacyl-tRNA ligases","protein_coding" "GSVIVT01036484001","No alias","Vitis vinifera","31.2 cell.division cell division protein ftsH, putative","protein_coding" "GSVIVT01036588001","No alias","Vitis vinifera","29.8 protein.assembly and cofactor ligation Plastidic SufC-like ATP-binding cassette/ATPase essential for Arabidopsis embryogenesis. Involved in the biogenesis and/or repair of oxidatively damaged FeñS clusters. Expressed in embryos and meristems. non-intrinsic ABC protein 7 (NAP7)","protein_coding" "GSVIVT01036610001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01036614001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01036628001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01036651001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes KEEP ON GOING (KEG), a RING E3 ligase involved in abscisic acid signaling. KEG is essential for Arabidopsis growth and development. ABA promotes KEG degradation via the ubiquitin dependent 26S proteasome pathway. KEEP ON GOING (KEG)","protein_coding" "GSVIVT01036657001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01036660001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01036678001","No alias","Vitis vinifera","7.1.3 OPP.oxidative PP.6-phosphogluconate dehydrogenase Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH).","protein_coding" "GSVIVT01036685001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "GSVIVT01036690001","No alias","Vitis vinifera","29.4 protein.postranslational modification Encodes a putative serine/threonine kinase It is expressed specifically in pollen and appears to function redundantly with AGC1.7 to regulate polarized growth of pollen tubes. AGC kinase 1.5 (AGC1.5)","protein_coding" "GSVIVT01036761001","No alias","Vitis vinifera","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases RNA helicase 36 (RH36)","protein_coding" "GSVIVT01036763001","No alias","Vitis vinifera","29.5.7 protein.degradation.metalloprotease Encodes an FtsH protease that is localized to the chloroplast. Mutations in this locus result in embryo lethality. FTSH protease 12 (FTSH12)","protein_coding" "GSVIVT01036767001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01036799001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "GSVIVT01036801001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "GSVIVT01036817001","No alias","Vitis vinifera","30.2.24 signalling.receptor kinases.S-locus glycoprotein like lectin protein kinase family protein","protein_coding" "GSVIVT01036869001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ATP-binding cassette 14 (ABCG14)","protein_coding" "GSVIVT01036876001","No alias","Vitis vinifera","27.2 RNA.transcription member of RLI subfamily RNAse l inhibitor protein 2 (RLI2)","protein_coding" "GSVIVT01036884001","No alias","Vitis vinifera","30.2.99 signalling.receptor kinases.misc Protein kinase superfamily protein","protein_coding" "GSVIVT01036936001","No alias","Vitis vinifera","30.2.13 signalling.receptor kinases.leucine rich repeat XIII Encodes a plasma membrane localized leucine-rich repeat receptor kinase that is involved in cell wall elongation. Loss of function mutations of FEI1 and FEI2 exhibit defects in root and hypocotyl cell elongation. Double mutants are defective in cell wall biosynthesis and have thick hypocotyls, and short, thick roots. FEI 1 (FEI1)","protein_coding" "GSVIVT01036971001","No alias","Vitis vinifera","17.3.1.2.99 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity. XF1","protein_coding" "GSVIVT01036973001","No alias","Vitis vinifera","17.3.1.2.99 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.other Encodes a putative protein that has been speculated, based on sequence similarities, to have squalene monooxygenase activity. XF1","protein_coding" "GSVIVT01036981001","No alias","Vitis vinifera","13.1.3.5.3 amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139. ABERRANT GROWTH AND DEATH 2 (AGD2)","protein_coding" "GSVIVT01036983001","No alias","Vitis vinifera","13.1.3.5.3 amino acid metabolism.synthesis.aspartate family.lysine.LL-diaminopimelic acid aminotransferase Involved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139. ABERRANT GROWTH AND DEATH 2 (AGD2)","protein_coding" "GSVIVT01037002001","No alias","Vitis vinifera","30.2.19 signalling.receptor kinases.legume-lectin Concanavalin A-like lectin protein kinase family protein","protein_coding" "GSVIVT01037027001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 9 (PGP9)","protein_coding" "GSVIVT01037101001","No alias","Vitis vinifera","29.5.5 protein.degradation.serine protease Encodes ClpX3, a subunit of the Clp protease complex. ATP-dependent Clp protease","protein_coding" "GSVIVT01037107001","No alias","Vitis vinifera","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases MATERNAL EFFECT EMBRYO ARREST 23 (MEE23)","protein_coding" "GSVIVT01037109001","No alias","Vitis vinifera","35.1 not assigned.no ontology P-loop containing nucleoside triphosphate hydrolases superfamily protein BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G73170.1) Has 745","protein_coding" "GSVIVT01037147001","No alias","Vitis vinifera","16.1.3 secondary metabolism.isoprenoids.tocopherol biosynthesis Tyrosine transaminase family protein","protein_coding" "GSVIVT01037193001","No alias","Vitis vinifera","26.17 misc.dynamin involved in trafficking from the trans-Golgi Network to the central vacuole. dynamin-like protein 6 (ADL6)","protein_coding" "GSVIVT01037221001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins disease resistance protein (TIR-NBS-LRR class), putative","protein_coding" "GSVIVT01037227001","No alias","Vitis vinifera","29.4 protein.postranslational modification ARM repeat superfamily protein","protein_coding" "GSVIVT01037235001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure chromatin remodeling 5 (CHR5)","protein_coding" "GSVIVT01037274001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "GSVIVT01037295001","No alias","Vitis vinifera","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 17 (CPK17)","protein_coding" "GSVIVT01037357001","No alias","Vitis vinifera","28.1 DNA.synthesis/chromatin structure replication factor C1 (RFC1)","protein_coding" "GSVIVT01037382001","No alias","Vitis vinifera","16.1.1.4 secondary metabolism.isoprenoids.non-mevalonate pathway.CMK Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase. 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase (CDPMEK)","protein_coding" "GSVIVT01037386001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01037432001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01037437001","No alias","Vitis vinifera","27.1 RNA.processing RNA helicase, ATP-dependent, SK12/DOB1 protein","protein_coding" "GSVIVT01037444001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01037466001","No alias","Vitis vinifera","13.1.3.6.1.3 amino acid metabolism.synthesis.aspartate family.misc.homoserine.homoserine dehydrogenase Glyceraldehyde-3-phosphate dehydrogenase-like family protein","protein_coding" "GSVIVT01037475001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01037477001","No alias","Vitis vinifera","20.1 stress.biotic","protein_coding" "GSVIVT01037513001","No alias","Vitis vinifera","29.4 protein.postranslational modification Nuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13. TOUSLED (TSL)","protein_coding" "GSVIVT01037540001","No alias","Vitis vinifera","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01037551001","No alias","Vitis vinifera","30.5 signalling.G-proteins GTP-binding protein Rab7 RAB GTPase homolog G3B (RABG3B)","protein_coding" "GSVIVT01037553001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01037558001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01037566001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. white-brown complex homolog protein 11 (WBC11)","protein_coding" "GSVIVT01037592001","No alias","Vitis vinifera","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01037610001","No alias","Vitis vinifera","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "GSVIVT01037631001","No alias","Vitis vinifera","20.1 stress.biotic Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2. RESISTANT TO P. SYRINGAE 2 (RPS2)","protein_coding" "GSVIVT01037652001","No alias","Vitis vinifera","30.3 signalling.calcium calmodulin-domain protein kinase CDPK isoform 9 (CPK9) calmodulin-domain protein kinase 9 (CPK9)","protein_coding" "GSVIVT01037670001","No alias","Vitis vinifera","11 lipid metabolism tetraacyldisaccharide 4'-kinase family protein","protein_coding" "GSVIVT01037674001","No alias","Vitis vinifera","28.2 DNA.repair Encodes MSH5, a homologue of the MutS-homolog family of genes required for normal levels of recombination in budding yeast, mouse and Caenorhabditis elegans. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. Transcripts of AtMSH5 are specific to reproductive tissues and expression of the protein is abundant during prophase I of meiosis. Involved in meiotic recombination. Required for the formation of Class I interference-sensitive crossovers. MUTS-homologue 5 (MSH5)","protein_coding" "GSVIVT01037706001","No alias","Vitis vinifera","23.1.1.2 nucleotide metabolism.synthesis.pyrimidine.aspartate transcarbamoylase encodes aspartate carbamoyltransferase catalyzing the second step in the de novo pyrimidine ribonucleotide biosynthesis PYRIMIDINE B (PYRB)","protein_coding" "GSVIVT01037720001","No alias","Vitis vinifera","29.6 protein.folding unknown function AR192","protein_coding" "GSVIVT01037766001","No alias","Vitis vinifera","31.1 cell.organisation Kinesin motor family protein","protein_coding" "GSVIVT01037773001","No alias","Vitis vinifera","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "GSVIVT01037789001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems member of MRP subfamily multidrug resistance-associated protein 8 (MRP8)","protein_coding" "GSVIVT01037822001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01037976001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "GSVIVT01037982001","No alias","Vitis vinifera","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Leucine-rich repeat transmembrane protein kinase","protein_coding" "GSVIVT01038022001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01038056001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01038169001","No alias","Vitis vinifera","27.1.2 RNA.processing.RNA helicase DEAD/DEAH box RNA helicase PRH75 PRH75","protein_coding" "GSVIVT01038192001","No alias","Vitis vinifera","30.6 signalling.MAP kinases Encodes a MAP kinase induced by pathogens, ethylene biosynthesis, oxidative stress and osmotic stress.Also involved in ovule development. Homozygous mutants in a MPK3 heterozygous background are female sterile due to defects in integument development.MPK6 appears to be associated with the microsomal compartment and may be involved in mediating secretory processes. MAP kinase 6 (MPK6)","protein_coding" "GSVIVT01038201001","No alias","Vitis vinifera","30.5 signalling.G-proteins Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. RAS 5 (RA-5)","protein_coding" "GSVIVT01038237001","No alias","Vitis vinifera","30.2.10 signalling.receptor kinases.leucine rich repeat X Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. BAK1-interacting receptor-like kinase 1 (BIR1)","protein_coding" "GSVIVT01038269001","No alias","Vitis vinifera","29.2.2.1 protein.synthesis.ribosome biogenesis.export from nucleus protein serine/threonine kinasesATP bindingcatalytics","protein_coding" "GSVIVT01038298001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01038371001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01038386001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01038391001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01038402001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "GSVIVT01038404001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01038446001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01038452001","No alias","Vitis vinifera","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "GSVIVT01038466001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01038541001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01038550001","No alias","Vitis vinifera","29.5.5 protein.degradation.serine protease CLP protease regulatory subunit CLPX mRNA, nuclear gene CLP protease regulatory subunit X (CLPX)","protein_coding" "GSVIVT01038582001","No alias","Vitis vinifera","11.1.13 lipid metabolism.FA synthesis and FA elongation.acyl-CoA binding protein Encodes acyl-CoA-binding protein with ankyrin repeats acyl-CoA binding protein 2 (ACBP2)","protein_coding" "GSVIVT01038610001","No alias","Vitis vinifera","27.3.99 RNA.regulation of transcription.unclassified P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "GSVIVT01038623001","No alias","Vitis vinifera","30.3 signalling.calcium CDPK-related kinase 3 (CRK3)","protein_coding" "GSVIVT01038629001","No alias","Vitis vinifera","27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Mutants result in smaller leaves indicating the role of the gene in leaf development. Expressed in root, shoot and flower growth-regulating factor 2 (GRF2)","protein_coding" "GSVIVT01038675001","No alias","Vitis vinifera","28.2 DNA.repair DNA mismatch repair protein MutS, type 2","protein_coding" "GSVIVT01038687001","No alias","Vitis vinifera","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 10 (PGP10)","protein_coding" "GSVIVT01038699001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "GSVIVT01038703001","No alias","Vitis vinifera","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "GSVIVT01038718001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01038720001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01038721001","No alias","Vitis vinifera","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "GSVIVT01038723001","No alias","Vitis vinifera","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "GSVIVT01038760001","No alias","Vitis vinifera","No description available","protein_coding" "GSVIVT01038764001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01038765001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "GSVIVT01038768001","No alias","Vitis vinifera","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "LOC_Os01g01080","Os01g0100900","Oryza sativa","11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids dihydrosphingosine phosphate lyase (DPL1)","protein_coding" "LOC_Os01g01110","No alias","Oryza sativa","30.2.7 signalling.receptor kinases.leucine rich repeat VII leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "LOC_Os01g01710","Os01g0106900","Oryza sativa","No description available","protein_coding" "LOC_Os01g02250","Os01g0112800","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g02280","Os01g0113150","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g02290","Os01g0113200","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02300","Os01g0113300","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02310","Os01g0113350","Oryza sativa","No description available","protein_coding" "LOC_Os01g02320","Os01g0113400","Oryza sativa","11.9.3.3 lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase Encodes SNC4 (suppressor of npr1-1, constitutive 4), an atypical receptor-like kinase with two predicted extracellular glycerophosphoryl diester phosphodiesterase domains. suppressor of npr1-1 constitutive 4 (SNC4)","protein_coding" "LOC_Os01g02350","Os01g0113700","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02360","Os01g0113800","Oryza sativa","No description available","protein_coding" "LOC_Os01g02400","Os01g0114300","Oryza sativa","No description available","protein_coding" "LOC_Os01g02410","Os01g0114400","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02420","Os01g0114500","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02430","Os01g0114600","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02440","Os01g0114700","Oryza sativa","No description available","protein_coding" "LOC_Os01g02460","Os01g0114900","Oryza sativa","No description available","protein_coding" "LOC_Os01g02550","Os01g0115500","Oryza sativa","No description available","protein_coding" "LOC_Os01g02560","Os01g0115600","Oryza sativa","No description available","protein_coding" "LOC_Os01g02570","Os01g0115700","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02580","Os01g0115750","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02600","Os01g0115900","Oryza sativa","No description available","protein_coding" "LOC_Os01g02610","Os01g0116000","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02680","Os01g0116200","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02690","Os01g0116300","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02700","Os01g0116400","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02720","Os01g0116600","Oryza sativa","29.2.4 protein.synthesis.elongation Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding" "LOC_Os01g02730","Os01g0116800","Oryza sativa","11.9.3.3 lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase Encodes SNC4 (suppressor of npr1-1, constitutive 4), an atypical receptor-like kinase with two predicted extracellular glycerophosphoryl diester phosphodiesterase domains. suppressor of npr1-1 constitutive 4 (SNC4)","protein_coding" "LOC_Os01g02750","Os01g0116900","Oryza sativa","30.2.16 signalling.receptor kinases.Catharanthus roseus-like RLK1 Protein kinase superfamily protein","protein_coding" "LOC_Os01g02770","Os01g0117100","Oryza sativa","No description available","protein_coding" "LOC_Os01g02790","Os01g0117266","Oryza sativa","No description available","protein_coding" "LOC_Os01g02800","Os01g0117400","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02810","Os01g0117500","Oryza sativa","No description available","protein_coding" "LOC_Os01g02830","Os01g0117600","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g02840","Os01g0117700","Oryza sativa","No description available","protein_coding" "LOC_Os01g03020","Os01g0120300","Oryza sativa","29.1.4 protein.aa activation.leucine-tRNA ligase EMBRYO DEFECTIVE 2369 (EMB2369)","protein_coding" "LOC_Os01g03030","Os01g0120400","Oryza sativa","29.1.7 protein.aa activation.alanine-tRNA ligase alanine-tRNA ligasesnucleic acid bindingligases, forming aminoacyl-tRNA and related compoundsnucleotide bindingATP binding","protein_coding" "LOC_Os01g03144","Os01g0121600","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "LOC_Os01g04230","Os01g0133900","Oryza sativa","30.2.3 signalling.receptor kinases.leucine rich repeat III leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "LOC_Os01g04450","Os01g0136800","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g04480","Os01g0137200","Oryza sativa","11.9.3.3 lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase Encodes SNC4 (suppressor of npr1-1, constitutive 4), an atypical receptor-like kinase with two predicted extracellular glycerophosphoryl diester phosphodiesterase domains. suppressor of npr1-1 constitutive 4 (SNC4)","protein_coding" "LOC_Os01g04490","Os01g0137282","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g04520","Os01g0137500","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g04550","Os01g0137950","Oryza sativa","11.9.3.3 lipid metabolism.lipid degradation.lysophospholipases.glycerophosphodiester phosphodiesterase Encodes SNC4 (suppressor of npr1-1, constitutive 4), an atypical receptor-like kinase with two predicted extracellular glycerophosphoryl diester phosphodiesterase domains. suppressor of npr1-1 constitutive 4 (SNC4)","protein_coding" "LOC_Os01g04580","Os01g0138400","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g04814","Os01g0141100","Oryza sativa","No description available","protein_coding" "LOC_Os01g04840","Os01g0141300","Oryza sativa","No description available","protein_coding" "LOC_Os01g05620","Os01g0149500","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g05960","Os01g0152800","Oryza sativa","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os01g06020","Os01g0153400","Oryza sativa","No description available","protein_coding" "LOC_Os01g06510","Os01g0158500","Oryza sativa","29.1.19 protein.aa activation.arginine-tRNA ligase embryo defective 1027 (emb1027)","protein_coding" "LOC_Os01g06600","Os01g0159400","Oryza sativa","No description available","protein_coding" "LOC_Os01g06660","Os01g0160100","Oryza sativa","5.2 fermentation.PDC pyruvate decarboxylase-2 pyruvate decarboxylase-2 (PDC2)","protein_coding" "LOC_Os01g07080","Os01g0164500","Oryza sativa","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g07560","Os01g0170300","Oryza sativa","30.2.11 signalling.receptor kinases.leucine rich repeat XI Leucine-rich receptor-like protein kinase family protein","protein_coding" "LOC_Os01g07740","Os01g0172200","Oryza sativa","27.1.2 RNA.processing.RNA helicase DEAD box RNA helicase family protein","protein_coding" "LOC_Os01g07870","Os01g0173900","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "LOC_Os01g07940","Os01g0174700","Oryza sativa","29.4 protein.postranslational modification D6 protein kinase like 2 (D6PKL2)","protein_coding" "LOC_Os01g08260","Os01g0177900","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 4 (PDR4)","protein_coding" "LOC_Os01g08270","Os01g0178000","Oryza sativa","13.1.6.2 amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "LOC_Os01g08450","Os01g0179700","Oryza sativa","30.5 signalling.G-proteins Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. RAS 5 (RA-5)","protein_coding" "LOC_Os01g08540","Os01g0180600","Oryza sativa","No description available","protein_coding" "LOC_Os01g08930","Os01g0184500","Oryza sativa","28.1 DNA.synthesis/chromatin structure Encodes RH39, a DEAD-box protein involved in the introduction of the hidden break into the 23S rRNA in the chloroplasts. Recombinant RH39 binds to the 23S rRNA in a segment adjacent to the stem-loop creating the hidden break target loop in a sequence-dependent manner. Has ATP-hydrolyzing activity at a Kcat of 5.3 /min in the presence of rRNA sequence. Mutants have drastically reduced level of level of ribulose 1,5-bisphosphate carboxylase/oxygenase. RH39 (RH39)","protein_coding" "LOC_Os01g09000","Os01g0185200","Oryza sativa","29.1.18 protein.aa activation.glutamine-tRNA ligase ovule abortion 9 (OVA9)","protein_coding" "LOC_Os01g09200","Os01g0186700","Oryza sativa","No description available","protein_coding" "LOC_Os01g09260","Os01g0187600","Oryza sativa","17.4.1 hormone metabolism.cytokinin.synthesis-degradation It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 4 (CKX4)","protein_coding" "LOC_Os01g09460","Os01g0190400","Oryza sativa","No description available","protein_coding" "LOC_Os01g09580","Os01g0191800","Oryza sativa","No description available","protein_coding" "LOC_Os01g09700","Os01g0192900","Oryza sativa","17.5.1.1 hormone metabolism.ethylene.synthesis-degradation.1-aminocyclopropane-1-carboxylate synthase Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. 1-amino-cyclopropane-1-carboxylate synthase 7 (ACS7)","protein_coding" "LOC_Os01g10050","Os01g0197200","Oryza sativa","17.5.3 hormone metabolism.ethylene.induced-regulated-responsive-activated DEA(D/H)-box RNA helicase family protein","protein_coding" "LOC_Os01g10110","Os01g0197700","Oryza sativa","17.4.1 hormone metabolism.cytokinin.synthesis-degradation It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 3 (CKX3)","protein_coding" "LOC_Os01g10150","Os01g0198200","Oryza sativa","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "LOC_Os01g10430","Os01g0201000","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os01g10700","No alias","Oryza sativa","29.4 protein.postranslational modification S-domain-2 5 (SD2-5)","protein_coding" "LOC_Os01g10710","No alias","Oryza sativa","26.16 misc.myrosinases-lectin-jacalin Encodes a receptor-like protein kinase that is expressed in roots. receptor-like protein kinase 4 (RLK4)","protein_coding" "LOC_Os01g10840","Os01g0205700","Oryza sativa","No description available","protein_coding" "LOC_Os01g10870","Os01g0206300","Oryza sativa","29.4 protein.postranslational modification Encodes CBL-interacting protein kinase 12 (CIPK12). CBL-interacting protein kinase 12 (CIPK12)","protein_coding" "LOC_Os01g10890","Os01g0206700","Oryza sativa","29.4 protein.postranslational modification Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain. CBL-interacting protein kinase 20 (CIPK20)","protein_coding" "LOC_Os01g11946","Os01g0218700","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "LOC_Os01g12290","Os01g0222800","Oryza sativa","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "LOC_Os01g12400","Os01g0223700","Oryza sativa","No description available","protein_coding" "LOC_Os01g12410","Os01g0223800","Oryza sativa","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "LOC_Os01g12420","Os01g0223900","Oryza sativa","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "LOC_Os01g12490","Os01g0224700","Oryza sativa","26.7 misc.oxidases - copper, flavone etc YUCCA6 (YUC6)","protein_coding" "LOC_Os01g12540","Os01g0225200","Oryza sativa","30.5 signalling.G-proteins GTP bindingGTP binding","protein_coding" "LOC_Os01g12660","Os01g0226400","Oryza sativa","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g12730","Os01g0227300","Oryza sativa","30.5 signalling.G-proteins RAB GTPase homolog G3D (RABG3d)","protein_coding" "LOC_Os01g12830","Os01g0228600","Oryza sativa","1.2.6 PS.photorespiration.hydroxypyruvate reductase D-isomer specific 2-hydroxyacid dehydrogenase family protein","protein_coding" "LOC_Os01g12900","Os01g0229400","Oryza sativa","30.5 signalling.G-proteins A member of ROP GTPase gene family. RHO-related protein from plants 9 (ROP9)","protein_coding" "LOC_Os01g13060","Os01g0231500","Oryza sativa","29.4 protein.postranslational modification casein kinase I-like 3 (ckl3)","protein_coding" "LOC_Os01g13190","Os01g0232700","Oryza sativa","13.1.7.9 amino acid metabolism.synthesis.histidine.histidinol dehydrogenase Encodes histidinol dehydrogenase. Up-regulated in response to UV-B. histidinol dehydrogenase (HDH)","protein_coding" "LOC_Os01g13270","Os01g0233800","Oryza sativa","29.4 protein.postranslational modification AGC kinase 1.7 (AGC1.7)","protein_coding" "LOC_Os01g13310","Os01g0234200","Oryza sativa","28.1 DNA.synthesis/chromatin structure Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues. topoisomerase II (TOPII)","protein_coding" "LOC_Os01g14090","Os01g0243100","Oryza sativa","No description available","protein_coding" "LOC_Os01g14510","Os01g0247500","Oryza sativa","30.2.13 signalling.receptor kinases.leucine rich repeat XIII Protein kinase superfamily protein","protein_coding" "LOC_Os01g14860","Os01g0252100","Oryza sativa","29.4 protein.postranslational modification encodes a SHAGGY-related kinase involved in meristem organization. shaggy-related kinase 11 (SK 11)","protein_coding" "LOC_Os01g15010","Os01g0254000","Oryza sativa","No description available","protein_coding" "LOC_Os01g15300","Os01g0256800","Oryza sativa","No description available","protein_coding" "LOC_Os01g15470","Os01g0259200","Oryza sativa","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "LOC_Os01g15480","Os01g0259400","Oryza sativa","29.4 protein.postranslational modification Encodes a microtubule-associated kinase-like protein RUNKEL (RUK).","protein_coding" "LOC_Os01g15540","Os01g0260100","Oryza sativa","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g15580","Os01g0260500","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g16020","Os01g0265000","Oryza sativa","No description available","protein_coding" "LOC_Os01g16030","Os01g0265100","Oryza sativa","No description available","protein_coding" "LOC_Os01g16290","Os01g0268300","Oryza sativa","28.1 DNA.synthesis/chromatin structure DNA GYRASE B2","protein_coding" "LOC_Os01g16370","Os01g0269500","Oryza sativa","20.1 stress.biotic","protein_coding" "LOC_Os01g16390","Os01g0269700","Oryza sativa","20.1 stress.biotic","protein_coding" "LOC_Os01g16400","Os01g0269800","Oryza sativa","20.1 stress.biotic","protein_coding" "LOC_Os01g16520","Os01g0271200","Oryza sativa","29.1.17 protein.aa activation.glutamate-tRNA ligase Glutamyl/glutaminyl-tRNA synthetase, class Ic","protein_coding" "LOC_Os01g18150","Os01g0284300","Oryza sativa","No description available","protein_coding" "LOC_Os01g18230","No alias","Oryza sativa","No description available","protein_coding" "LOC_Os01g18670","Os01g0290700","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 21 (PGP21)","protein_coding" "LOC_Os01g19150","Os01g0296100","Oryza sativa","29.4 protein.postranslational modification encodes a SHAGGY-related kinase involved in meristem organization. shaggy-related kinase 11 (SK 11)","protein_coding" "LOC_Os01g19160","Os01g0296000","Oryza sativa","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat receptor-like protein kinase family protein","protein_coding" "LOC_Os01g19260","Os01g0297200","Oryza sativa","29.5.9 protein.degradation.AAA type AAA-ATPase 1 (AATP1)","protein_coding" "LOC_Os01g20720","Os01g0308300","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g20880","Os01g0310500","Oryza sativa","29.4.1.58 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII Protein kinase superfamily protein","protein_coding" "LOC_Os01g20900","Os01g0310800","Oryza sativa","29.4.1.58 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VIII Protein kinase superfamily protein","protein_coding" "LOC_Os01g21240","Os01g0314700","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g21960","Os01g0323000","Oryza sativa","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "LOC_Os01g23380","Os01g0335700","Oryza sativa","20.1 stress.biotic","protein_coding" "LOC_Os01g23620","Os01g0338000","Oryza sativa","No description available","protein_coding" "LOC_Os01g24820","Os01g0350300","Oryza sativa","20.1.7 stress.biotic.PR-proteins HOPZ-ACTIVATED RESISTANCE 1 (ZAR1)","protein_coding" "LOC_Os01g25386","Os01g0356400","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim. multidrug resistance-associated protein 4 (MRP4)","protein_coding" "LOC_Os01g25440","Os01g0356500","Oryza sativa","18.2.1 Co-factor and vitamine metabolism.thiamine.thiamine diphosphokinase Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine. thiamin pyrophosphokinase1 (TPK1)","protein_coding" "LOC_Os01g25450","Os01g0356800","Oryza sativa","29.3.3 protein.targeting.chloroplast An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. translocon at the outer envelope membrane of chloroplasts 159 (TOC159)","protein_coding" "LOC_Os01g25630","Os01g0358700","Oryza sativa","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "LOC_Os01g25720","Os01g0359400","Oryza sativa","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "LOC_Os01g25740","Os01g0359600","Oryza sativa","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "LOC_Os01g25760","Os01g0359800","Oryza sativa","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "LOC_Os01g25810","Os01g0360100","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g25880","Os01g0360600","Oryza sativa","18.4.9 Co-factor and vitamine metabolism.pantothenate.dephospho-CoA kinase (DPCK) AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA. ATCOAE","protein_coding" "LOC_Os01g26300","Os01g0365000","Oryza sativa","30.2.25 signalling.receptor kinases.wall associated kinase Encodes a receptor-like kinase that does not contain an extracellular leucine-rich repeat domain. A novel type of dominant disease-resistance protein that confers resistance to a broad spectrum of Fusarium races. RESISTANCE TO FUSARIUM OXYSPORUM 1 (RFO1)","protein_coding" "LOC_Os01g27040","Os01g0367900","Oryza sativa","28.1 DNA.synthesis/chromatin structure chromatin remodeling factor17 (CHR17)","protein_coding" "LOC_Os01g27050","Os01g0368000","Oryza sativa","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "LOC_Os01g27230","Os01g0369900","Oryza sativa","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2 (OPR2)","protein_coding" "LOC_Os01g27240","Os01g0370000","Oryza sativa","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 2 (OPR2)","protein_coding" "LOC_Os01g27520","Os01g0372700","Oryza sativa","29.1.22 protein.aa activation.asparagine-tRNA ligase SYNC3","protein_coding" "LOC_Os01g27730","Os01g0375000","Oryza sativa","30.5 signalling.G-proteins GTP-binding family protein","protein_coding" "LOC_Os01g28730","Os01g0384300","Oryza sativa","30.2.23 signalling.receptor kinases.RKF3 like receptor-like serine/threonine kinase (RKF3) receptor-like kinase in in flowers 3 (RKF3)","protein_coding" "LOC_Os01g32080","Os01g0505400","Oryza sativa","5.2 fermentation.PDC Thiamine pyrophosphate dependent pyruvate decarboxylase family protein","protein_coding" "LOC_Os01g32660","Os01g0510100","Oryza sativa","30.6 signalling.MAP kinases Encodes a member of the MAP Kinase Kinase family of proteins. It can phosphorylate MPK12 in vitro and it can be dephosphorylated by MKP2 in vitro. MAP kinase kinase 6 (MKK6)","protein_coding" "LOC_Os01g33040","Os01g0513900","Oryza sativa","31.1 cell.organisation Encodes a kinesin HINKEL. Required for cytokinesis in pollen. Mutant has cytokinesis defects seedling lethal. HINKEL (HIK)","protein_coding" "LOC_Os01g33500","No alias","Oryza sativa","No description available","protein_coding" "LOC_Os01g33684","Os01g0520600","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g33810","Os01g0521600","Oryza sativa","20.1 stress.biotic","protein_coding" "LOC_Os01g33950","Os01g0523100","Oryza sativa","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os01g34970","Os01g0533900","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 11 (PGP11)","protein_coding" "LOC_Os01g35030","Os01g0534700","Oryza sativa","No description available","protein_coding" "LOC_Os01g35850","Os01g0540300","Oryza sativa","30.5 signalling.G-proteins A member of ROP GTPase gene family. RHO-related protein from plants 9 (ROP9)","protein_coding" "LOC_Os01g36390","Os01g0544450","Oryza sativa","28.1 DNA.synthesis/chromatin structure MINICHROMOSOME MAINTENANCE 4 (MCM4)","protein_coding" "LOC_Os01g36550","Os01g0546000","Oryza sativa","30.2.21 signalling.receptor kinases.lysine motif protein kinase family protein / peptidoglycan-binding LysM domain-containing protein","protein_coding" "LOC_Os01g36640","Os01g0547000","Oryza sativa","20.1 stress.biotic","protein_coding" "LOC_Os01g36790","Os01g0548600","Oryza sativa","No description available","protein_coding" "LOC_Os01g36860","Os01g0549400","Oryza sativa","27.1.2 RNA.processing.RNA helicase RNA HELICASE DRH1 DEAD box RNA helicase 1 (DRH1)","protein_coding" "LOC_Os01g36890","Os01g0549700","Oryza sativa","No description available","protein_coding" "LOC_Os01g36920","Os01g0550000","Oryza sativa","No description available","protein_coding" "LOC_Os01g37800","Os01g0558600","Oryza sativa","30.5 signalling.G-proteins Belongs to the Rab1 GTPase subfamily. This small GTP-binding protein is required in ER to Golgi transportation. RAS 5 (RA-5)","protein_coding" "LOC_Os01g37837","Os01g0559100","Oryza sativa","29.1.11 protein.aa activation.serine-tRNA ligase seryl-tRNA synthetase / serine--tRNA ligase","protein_coding" "LOC_Os01g38840","Os01g0568800","Oryza sativa","No description available","protein_coding" "LOC_Os01g38950","Os01g0570500","Oryza sativa","29.4 protein.postranslational modification Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. casein kinase 1-like protein 2 (CKL2)","protein_coding" "LOC_Os01g38970","Os01g0570700","Oryza sativa","No description available","protein_coding" "LOC_Os01g39250","Os01g0574400","Oryza sativa","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the mitochondrion FTSH protease 4 (ftsh4)","protein_coding" "LOC_Os01g39260","Os01g0574500","Oryza sativa","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the mitochondrion FTSH protease 4 (ftsh4)","protein_coding" "LOC_Os01g39270","Os01g0574600","Oryza sativa","13.1.1.1.4 amino acid metabolism.synthesis.central amino acid metabolism.GABA.gamma-hydroxybutyrate DH Glyoxylate reductase located in chloroplasts. glyoxylate reductase 2 (GLYR2)","protein_coding" "LOC_Os01g39350","Os01g0575400","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os01g39820","Os01g0580150","Oryza sativa","30.2.25 signalling.receptor kinases.wall associated kinase encodes a wall-associated kinase wall associated kinase 3 (WAK3)","protein_coding" "LOC_Os01g39970","Os01g0581400","Oryza sativa","29.4.1.59 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "LOC_Os01g40150","Os01g0583700","Oryza sativa","No description available","protein_coding" "LOC_Os01g40170","Os01g0583900","Oryza sativa","No description available","protein_coding" "LOC_Os01g40820","Os01g0590700","Oryza sativa","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the chloroplast and the mitochondrion FTSH protease 11 (FTSH11)","protein_coding" "LOC_Os01g40840","Os01g0590900","Oryza sativa","29.4 protein.postranslational modification Encodes protein kinase AME3. AME3","protein_coding" "LOC_Os01g40980","Os01g0592900","Oryza sativa","28.1 DNA.synthesis/chromatin structure RAD3-like DNA-binding helicase protein","protein_coding" "LOC_Os01g41730","Os01g0601200","Oryza sativa","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "LOC_Os01g41890","Os01g0603100","Oryza sativa","20.1 stress.biotic Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13)","protein_coding" "LOC_Os01g42030","Os01g0605100","Oryza sativa","29.5.9 protein.degradation.AAA type cytochrome BC1 synthesis (BCS1)","protein_coding" "LOC_Os01g42070","Os01g0605500","Oryza sativa","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "LOC_Os01g42370","Os01g0609200","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "LOC_Os01g42380","Os01g0609300","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "LOC_Os01g42400","No alias","Oryza sativa","30.6 signalling.MAP kinases member of MAP Kinase Kinase family. Autophosphorylates and also phosphorylates MPK3 and MPK6. Independently involved in ethylene and calmalexin biosynthesis. Induces transcription of ACS2, ACS6, ERF1, ERF2, ERF5, ERF6, CYP79B2, CYP79B3, CYP71A13 and PAD3. MAP kinase kinase 9 (MKK9)","protein_coding" "LOC_Os01g42410","Os01g0609900","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots. pleiotropic drug resistance 12 (PDR12)","protein_coding" "LOC_Os01g42900","Os01g0615500","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "LOC_Os01g42950","Os01g0616100","Oryza sativa","29.4 protein.postranslational modification ARM repeat superfamily protein","protein_coding" "LOC_Os01g42990","Os01g0616600","Oryza sativa","35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein Tetratricopeptide repeat (TPR)-like superfamily protein","protein_coding" "LOC_Os01g43120","Os01g0618400","Oryza sativa","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g43130","Os01g0618500","Oryza sativa","27.1.2 RNA.processing.RNA helicase P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g43150","Os01g0618800","Oryza sativa","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the chloroplast and the mitochondrion FTSH protease 11 (FTSH11)","protein_coding" "LOC_Os01g43410","Os01g0622600","Oryza sativa","No description available","protein_coding" "LOC_Os01g43480","Os01g0623500","Oryza sativa","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g43580","Os01g0625200","Oryza sativa","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "LOC_Os01g43910","Os01g0629900","Oryza sativa","30.6 signalling.MAP kinases member of MAP Kinase MAP kinase 20 (MPK20)","protein_coding" "LOC_Os01g44110","Os01g0631700","Oryza sativa","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "LOC_Os01g45190","Os01g0639100","Oryza sativa","29.2.2.3.5 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.DExD-box helicases Encodes an RNA helicase that may be a component of the Exon Junction Complex. Subcellular localization is modulated by stress. Under normal conditions it is localized to the nuceloplasm but under hyopoxic conditions it localizes to the nucleolus and splicing speckles. eukaryotic initiation factor 4A-III (EIF4A-III)","protein_coding" "LOC_Os01g45450","Os01g0641800","Oryza sativa","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g45520","Os01g0642700","Oryza sativa","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "LOC_Os01g45620","Os01g0643800","Oryza sativa","29.4 protein.postranslational modification ATMPK8, ATMPK8","protein_coding" "LOC_Os01g45760","Os01g0645400","Oryza sativa","26.7 misc.oxidases - copper, flavone etc Belongs to the YUC gene family. Encodes a predicted flavin monooxygenase YUC4 involved in auxin biosynthesis and plant development. YUCCA4 (YUC4)","protein_coding" "LOC_Os01g46030","Os01g0648600","Oryza sativa","30.2.99 signalling.receptor kinases.misc Protein kinase superfamily protein","protein_coding" "LOC_Os01g47470","Os01g0664200","Oryza sativa","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "LOC_Os01g47530","Os01g0665200","Oryza sativa","30.6 signalling.MAP kinases member of MAP Kinase MAP kinase 20 (MPK20)","protein_coding" "LOC_Os01g47730","Os01g0667600","Oryza sativa","30.5 signalling.G-proteins RAB GTPase homolog A1F (RABA1f)","protein_coding" "LOC_Os01g47810","Os01g0668400","Oryza sativa","30.2.24 signalling.receptor kinases.S-locus glycoprotein like lectin protein kinase family protein","protein_coding" "LOC_Os01g48270","Os01g0673500","Oryza sativa","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g48900","Os01g0681100","Oryza sativa","30.5 signalling.G-proteins Encodes a dynamin-like protein related to phragmoplastin. Mutations in this gene, in combination with mutation in ADL1E, result in defects in embryogenesis, cell plate formation and trichome branching. Also controls vascular patterning in combination with VAN3 and GNOM. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis. dynamin-like protein (DL1)","protein_coding" "LOC_Os01g49000","Os01g0683100","Oryza sativa","No description available","protein_coding" "LOC_Os01g49190","Os01g0685800","Oryza sativa","No description available","protein_coding" "LOC_Os01g49529","Os01g0689900","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g49580","Os01g0690600","Oryza sativa","30.2.20 signalling.receptor kinases.wheat LRK10 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g49680","Os01g0691600","Oryza sativa","No description available","protein_coding" "LOC_Os01g50080","Os01g0695700","Oryza sativa","No description available","protein_coding" "LOC_Os01g50100","Os01g0695800","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 16 (PGP16)","protein_coding" "LOC_Os01g50160","Os01g0696600","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 11 (PGP11)","protein_coding" "LOC_Os01g50370","Os01g0699100","Oryza sativa","29.4 protein.postranslational modification member of MEKK subfamily mitogen-activated protein kinase kinase kinase 16 (MAPKKK16)","protein_coding" "LOC_Os01g50400","Os01g0699400","Oryza sativa","29.4 protein.postranslational modification member of MEKK subfamily mitogen-activated protein kinase kinase kinase 16 (MAPKKK16)","protein_coding" "LOC_Os01g50410","Os01g0699500","Oryza sativa","29.4 protein.postranslational modification member of MEKK subfamily mitogen-activated protein kinase kinase kinase 17 (MAPKKK17)","protein_coding" "LOC_Os01g50420","Os01g0699600","Oryza sativa","29.4 protein.postranslational modification member of MEKK subfamily mitogen-activated protein kinase kinase kinase 17 (MAPKKK17)","protein_coding" "LOC_Os01g51200","Os01g0708400","Oryza sativa","29.4 protein.postranslational modification Encodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus. casein kinase 1-like protein 2 (CKL2)","protein_coding" "LOC_Os01g51380","Os01g0711000","Oryza sativa","34.1.1.1 transport.p- and v-ATPases.H+-transporting two-sector ATPase.subunit B ATPase, V1 complex, subunit B protein","protein_coding" "LOC_Os01g51634","Os01g0713900","Oryza sativa","31.1.1.3.11 cell.organisation.cytoskeleton.Myosin.Class XI Encodes a member of the type XI myosin protein family involved in root hair growth, trichome development, and organelle trafficking. This gene appears to be expressed at low levels throughout the plant. XIK","protein_coding" "LOC_Os01g51700","Os01g0714900","Oryza sativa","30.5 signalling.G-proteins RAB GTPase homolog G3A (RABG3A)","protein_coding" "LOC_Os01g52050","Os01g0718300","Oryza sativa","17.3.2.1 hormone metabolism.brassinosteroid.signal transduction.BRI Encodes a plasma membrane localized leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction. BRI1 ligand is brassinolide which binds at the extracellular domain. Binding results in phosphorylation of the kinase domain which activates the BRI1 protein leading to BR responses. Residue T-1049 and either S-1044 or T-1045 were essential for kinase function in vitro and normal BRI1 signaling in planta. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. BRI1 appears to be involved in the autonomous pathway that regulates the transition to flowering, primarily through its effects on FLC expression levels, as uncovered by double mutant analyses. This most likely occurs as a result of BRI1-dependent effects on histone acetylation, but not histone triMeH3K4 methylation, at the FLC locus. BRASSINOSTEROID INSENSITIVE 1 (BRI1)","protein_coding" "LOC_Os01g52270","Os01g0720800","Oryza sativa","No description available","protein_coding" "LOC_Os01g52304","Os01g0721100","Oryza sativa","No description available","protein_coding" "LOC_Os01g52320","Os01g0721200","Oryza sativa","No description available","protein_coding" "LOC_Os01g52330","Os01g0721300","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g52450","Os01g0722700","Oryza sativa","No description available","protein_coding" "LOC_Os01g52470","Os01g0723000","Oryza sativa","29.2.4 protein.synthesis.elongation encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1)","protein_coding" "LOC_Os01g52550","Os01g0723800","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "LOC_Os01g53150","Os01g0732200","Oryza sativa","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g53200","Os01g0732700","Oryza sativa","26.7 misc.oxidases - copper, flavone etc YUCCA6 (YUC6)","protein_coding" "LOC_Os01g53250","Os01g0733600","Oryza sativa","19.99 tetrapyrrole synthesis.unspecified Flavodoxin family protein","protein_coding" "LOC_Os01g53450","Os01g0736400","Oryza sativa","No description available","protein_coding" "LOC_Os01g53840","Os01g0741200","Oryza sativa","30.2.21 signalling.receptor kinases.lysine motif protein kinase family protein / peptidoglycan-binding LysM domain-containing protein","protein_coding" "LOC_Os01g53900","Os01g0742200","Oryza sativa","29.2.4 protein.synthesis.elongation encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1)","protein_coding" "LOC_Os01g53910","Os01g0742300","Oryza sativa","7.1.3 OPP.oxidative PP.6-phosphogluconate dehydrogenase 6-phosphogluconate dehydrogenase family protein","protein_coding" "LOC_Os01g53930","Os01g0742500","Oryza sativa","No description available","protein_coding" "LOC_Os01g54020","Os01g0743400","Oryza sativa","29.1 protein.aa activation ovule abortion 4 (OVA4)","protein_coding" "LOC_Os01g54030","Os01g0743500","Oryza sativa","No description available","protein_coding" "LOC_Os01g54080","Os01g0744000","Oryza sativa","No description available","protein_coding" "LOC_Os01g54100","Os01g0744300","Oryza sativa","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "LOC_Os01g54590","Os01g0750000","Oryza sativa","30.5 signalling.G-proteins small GTP-binding protein (Rab11)similar to YPT3/RAB11 proteins in yeast and mammals, respectively. YPT3/RAB11 is involved in intracellular protein trafficking. RAB GTPase homolog A1B (RABA1b)","protein_coding" "LOC_Os01g54910","Os01g0752700","Oryza sativa","29.2.4 protein.synthesis.elongation elongation factor family protein","protein_coding" "LOC_Os01g55260","Os01g0757400","Oryza sativa","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g55440","Os01g0759200","Oryza sativa","29.4 protein.postranslational modification Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain. CBL-interacting protein kinase 20 (CIPK20)","protein_coding" "LOC_Os01g55450","Os01g0759400","Oryza sativa","29.4 protein.postranslational modification Encodes CBL-interacting protein kinase 12 (CIPK12). CBL-interacting protein kinase 12 (CIPK12)","protein_coding" "LOC_Os01g55530","Os01g0760400","Oryza sativa","35.1.6 not assigned.no ontology.Toll-Interleukin-Resistance (TIR) domain-containing protein Disease resistance protein (TIR-NBS class)","protein_coding" "LOC_Os01g55540","Os01g0760600","Oryza sativa","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase Encodes the chloroplastic isozyme of aspartate aminotransferase. Involved in aspartate biosynthesis and nitrogen metabolism. mRNA is expressed in senescing leaves. aspartate aminotransferase 3 (ASP3)","protein_coding" "LOC_Os01g56380","Os01g0770200","Oryza sativa","16.4.1 secondary metabolism.N misc.alkaloid-like Pyridoxal phosphate (PLP)-dependent transferases superfamily protein","protein_coding" "LOC_Os01g56400","Os01g0770500","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems member of NAP subfamily ATNAP13","protein_coding" "LOC_Os01g56580","Os01g0772600","Oryza sativa","29.4 protein.postranslational modification Protein kinase family protein","protein_coding" "LOC_Os01g56600","Os01g0772800","Oryza sativa","29.3.4.99 protein.targeting.secretory pathway.unspecified Signal recognition particle, SRP54 subunit protein","protein_coding" "LOC_Os01g56764","Os01g0774500","Oryza sativa","35.2 not assigned.unknown P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g56810","Os01g0775400","Oryza sativa","17.4.1 hormone metabolism.cytokinin.synthesis-degradation This gene used to be called AtCKX6. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 5 (CKX5)","protein_coding" "LOC_Os01g57100","Os01g0779300","Oryza sativa","30.2.19 signalling.receptor kinases.legume-lectin Concanavalin A-like lectin protein kinase family protein","protein_coding" "LOC_Os01g57110","Os01g0779400","Oryza sativa","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors embryo sac development arrest 16 (EDA16)","protein_coding" "LOC_Os01g57270","Os01g0781100","Oryza sativa","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "LOC_Os01g57280","Os01g0781200","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g57310","Os01g0781700","Oryza sativa","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "LOC_Os01g57340","Os01g0782100","Oryza sativa","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "LOC_Os01g57870","Os01g0788500","Oryza sativa","20.1 stress.biotic Encodes a plasma membrane protein with leucine-rich repeat, leucine zipper, and P loop domains that confers resistance to Pseudomonas syringae infection by interacting with the avirulence gene avrRpt2. RPS2 protein interacts directly with plasma membrane associated protein RIN4 and this interaction is disrupted by avrRpt2. RESISTANT TO P. SYRINGAE 2 (RPS2)","protein_coding" "LOC_Os01g57940","Os01g0789200","Oryza sativa","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "LOC_Os01g58510","Os01g0798900","Oryza sativa","20.1.7 stress.biotic.PR-proteins P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g58530","Os01g0799100","Oryza sativa","27.3.99 RNA.regulation of transcription.unclassified NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g58790","Os01g0802100","Oryza sativa","16.1.1.4 secondary metabolism.isoprenoids.non-mevalonate pathway.CMK Encodes a 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase. 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase (CDPMEK)","protein_coding" "LOC_Os01g59550","Os01g0810500","Oryza sativa","30.2.1 signalling.receptor kinases.leucine rich repeat I Leucine-rich repeat transmembrane protein kinase protein","protein_coding" "LOC_Os01g59560","Os01g0810600","Oryza sativa","30.2.99 signalling.receptor kinases.misc Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os01g59790","Os01g0813400","Oryza sativa","29.4 protein.postranslational modification A member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. The gene is shown to play a role in cell division, cell expansion and cellulose production using antisense construct. ADP-ribosylation factor A1F (ARFA1F)","protein_coding" "LOC_Os01g60670","Os01g0821900","Oryza sativa","30.2.7 signalling.receptor kinases.leucine rich repeat VII Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os01g60910","Os01g0824600","Oryza sativa","29.4 protein.postranslational modification Encodes CBL-interacting protein kinase 2 (CIPK2). CBL-interacting protein kinase 2 (CIPK2)","protein_coding" "LOC_Os01g61590","Os01g0832300","Oryza sativa","30.3 signalling.calcium member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 13 (CPK13)","protein_coding" "LOC_Os01g61620","Os01g0832900","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os01g61940","Os01g0836600","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "LOC_Os01g62040","Os01g0837500","Oryza sativa","33.99 development.unspecified RESISTANCE TO PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1 (RIN1)","protein_coding" "LOC_Os01g62080","Os01g0837900","Oryza sativa","29.4 protein.postranslational modification a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast. FUS3-complementing gene 1 (FC1)","protein_coding" "LOC_Os01g62500","Os01g0842600","Oryza sativa","29.5.9 protein.degradation.AAA type encodes an FtsH protease that is localized to the mitochondrion FTSH protease 3 (ftsh3)","protein_coding" "LOC_Os01g62570","Os01g0843300","Oryza sativa","30.5 signalling.G-proteins Encodes a protein with similarity to GTPases that is localized to the mitochondrion. Involved in embryogenesis, pollen tube growth and required for mitochondrial development. MIRO-related GTP-ase 1 (MIRO1)","protein_coding" "LOC_Os01g62950","Os01g0848700","Oryza sativa","30.5 signalling.G-proteins RAB GTPase homolog A2C (RABA2c)","protein_coding" "LOC_Os01g63280","Os01g0852100","Oryza sativa","29.4.1.54 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IV Arabidopsis thaliana calmodulin-binding receptor-like kinase mRNA calmodulin-binding receptor-like cytoplasmic kinase 1 (CRCK1)","protein_coding" "LOC_Os01g64490","Os01g0864700","Oryza sativa","No description available","protein_coding" "LOC_Os01g64820","Os01g0868300","Oryza sativa","No description available","protein_coding" "LOC_Os01g64970","Os01g0869900","Oryza sativa","No description available","protein_coding" "LOC_Os01g65010","Os01g0870400","Oryza sativa","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "LOC_Os01g65090","Os01g0871300","Oryza sativa","No description available","protein_coding" "LOC_Os01g65230","Os01g0872800","Oryza sativa","29.4 protein.postranslational modification 3-phosphoinositide-dependent protein kinase","protein_coding" "LOC_Os01g65850","Os01g0881000","Oryza sativa","No description available","protein_coding" "LOC_Os01g66020","Os01g0883000","Oryza sativa","30.2.23 signalling.receptor kinases.RKF3 like Protein kinase superfamily protein","protein_coding" "LOC_Os01g66330","Os01g0886600","Oryza sativa","29.5.5 protein.degradation.serine protease CLP protease regulatory subunit CLPX mRNA, nuclear gene CLP protease regulatory subunit X (CLPX)","protein_coding" "LOC_Os01g66520","Os01g0888700","Oryza sativa","29.2.2.3.99 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.misc protein serine/threonine kinasesATP bindingcatalytics","protein_coding" "LOC_Os01g66630","Os01g0890100","Oryza sativa","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "LOC_Os01g67160","Os01g0897000","Oryza sativa","31.2 cell.division Encodes a member of a plant specific family of cyclin dependent kinases. cyclin-dependent kinase B12 (CDKB12)","protein_coding" "LOC_Os01g67510","Os01g0901200","Oryza sativa","28.1 DNA.synthesis/chromatin structure recA DNA recombination family protein","protein_coding" "LOC_Os01g67550","Os01g0901700","Oryza sativa","26.7 misc.oxidases - copper, flavone etc A locus involved in embryogenesis. Mutations in this locus result in embryo lethality. EMBRYO DEFECTIVE 2421 (EMB2421)","protein_coding" "LOC_Os01g67580","Os01g0902100","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "LOC_Os01g67740","Os01g0904400","Oryza sativa","28.1 DNA.synthesis/chromatin structure SMC2-1 (SMC2) structural maintenance of chromosomes 2 (SMC2)","protein_coding" "LOC_Os01g68320","Os01g0911100","Oryza sativa","27.1 RNA.processing P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g68330","Os01g0911300","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems member of TAP subfamily transporter associated with antigen processing protein 1 (TAP1)","protein_coding" "LOC_Os01g69130","Os01g0920400","Oryza sativa","26.17 misc.dynamin Encodes a protein with high sequence similarity to the dynamin superfamily. Among those members ADL2 was most closely related to Dnm1p of yeast and likely a member of the Vps1p subfamily. Widely expressed in various tissues with highest expression in flower tissues. Localizes to the chloroplast, mitochondrion and peroxisome. Involved in peroxisome and mitochondria fission in combination with DRP3B. dynamin-related protein 3A (DRP3A)","protein_coding" "LOC_Os01g70080","Os01g0925100","Oryza sativa","20.1 stress.biotic Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13)","protein_coding" "LOC_Os01g70130","Os01g0925700","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os01g70260","Os01g0927500","Oryza sativa","30.2.99 signalling.receptor kinases.misc Encodes a protein with predicted Ser/Thr kinase activity and membrane localization that is involved in the CLV3 signaling pathway that represses WUS expression in the meristem. Loss of function of CRN can suppress the phenotype caused by overexpression of CLV3. SOL2 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol2 partially suppresses the short root phenotype caused by CLE19 overexpression. Mutant flowers have extra carpels. CORYNE (CRN)","protein_coding" "LOC_Os01g70360","Os01g0928600","Oryza sativa","11.8.1.2 lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. long chain base2 (LCB2)","protein_coding" "LOC_Os01g70370","Os01g0928700","Oryza sativa","11.8.1.2 lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. long chain base2 (LCB2)","protein_coding" "LOC_Os01g70380","Os01g0928800","Oryza sativa","11.8.1.2 lipid metabolism.exotics (steroids, squalene etc).sphingolipids.serine C-palmitoyltransferase Encodes the LCB2 subunit of serine palmitoyltransferase, an enzyme involved in sphingosine biosynthesis. The protein is localized to the endoplasmic reticulum. long chain base2 (LCB2)","protein_coding" "LOC_Os01g70580","Os01g0931400","Oryza sativa","18.2.1 Co-factor and vitamine metabolism.thiamine.thiamine diphosphokinase Encodes a thiamine pyrophosphokinase capable of producing thiamine pyrophosphate from free thiamine. thiamin pyrophosphokinase1 (TPK1)","protein_coding" "LOC_Os01g71000","Os01g0936100","Oryza sativa","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "LOC_Os01g71114","Os01g0937400","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os01g71310","Os01g0940000","Oryza sativa","17.4.1 hormone metabolism.cytokinin.synthesis-degradation It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase/dehydrogenase 1 (CKX1)","protein_coding" "LOC_Os01g71320","Os01g0940100","Oryza sativa","2.2.1.4 major CHO metabolism.degradation.sucrose.hexokinase hexokinase-like 1 (HKL1)","protein_coding" "LOC_Os01g72680","Os01g0956800","Oryza sativa","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "LOC_Os01g72700","Os01g0957100","Oryza sativa","30.2.7 signalling.receptor kinases.leucine rich repeat VII Leucine-rich receptor-like protein kinase family protein","protein_coding" "LOC_Os01g72790","Os01g0958000","Oryza sativa","No description available","protein_coding" "LOC_Os01g72800","Os01g0958100","Oryza sativa","29.3.3 protein.targeting.chloroplast chloroplast SRP receptor homolog, alpha subunit CPFTSY. Required for LHCP integration into isolated thylakoids. CPFTSY","protein_coding" "LOC_Os01g72880","Os01g0958900","Oryza sativa","28.2 DNA.repair Encodes a protein with similarity to Mut1 DNA mismatch repair protein, from E.coli. The protein is expressed during prophase I of meiosis, colocalizes with MLH3 throughout pachytene and is dependent on MLH3 for proper localization. MUTL-homologue 1 (MLH1)","protein_coding" "LOC_Os01g73370","Os01g0964400","Oryza sativa","29.4 protein.postranslational modification Encodes a receptor-like protein kinase. receptor-like protein kinase 1 (RLK1)","protein_coding" "LOC_Os01g73530","Os01g0966100","Oryza sativa","No description available","protein_coding" "LOC_Os01g73900","Os01g0970600","Oryza sativa","29.2.3 protein.synthesis.initiation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os01g74470","Os01g0976100","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 20 (PGP20)","protein_coding" "LOC_Os02g01150","Os02g0101500","Oryza sativa","1.2.6 PS.photorespiration.hydroxypyruvate reductase Encodes hydroxypyruvate reductase. hydroxypyruvate reductase (HPR)","protein_coding" "LOC_Os02g01180","Os02g0101800","Oryza sativa","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "LOC_Os02g01280","Os02g0102900","Oryza sativa","No description available","protein_coding" "LOC_Os02g01440","Os02g0104700","Oryza sativa","35.2 not assigned.unknown Encodes a protein with similarity to the bacterial YqeH GTPase required for proper ribosome assembly. In Arabidopsis, mutant analyses show that this protein regulates growth and hormonal signaling in plants. It also attenuates oxidative stress and reactive oxygen species (ROS). It also seems to be involved in regulating leaf senescence and cell death. This gene product is also involved in nitric oxide biosynthesis in response to ABA but not exogenous H2O2. This protein also appears to be required for proper plastid biogenesis. Levels of several plastid-localized proteins, including RBCL, ClpP1, and the MEP biosynthesis enzymes DXS and DXR are altered in rif1-1 mutants. This protein was originally characterized as a mitrochondrial-localized nitric oxide synthase, but, the synthase activity was later disproven. In addition, new studies with GFP fusion proteins and chloroplast import assays suggest that this protein is found in chloroplasts. NO ASSOCIATED 1 (NOA1)","protein_coding" "LOC_Os02g01730","Os02g0106900","Oryza sativa","30.2.99 signalling.receptor kinases.misc Protein kinase superfamily protein","protein_coding" "LOC_Os02g01740","Os02g0106966","Oryza sativa","28.1 DNA.synthesis/chromatin structure embryo defective 1507 (emb1507)","protein_coding" "LOC_Os02g01820","Os02g0107900","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ABC2 homolog 6 (ATH6)","protein_coding" "LOC_Os02g01920","Os02g0109100","Oryza sativa","16.1.2.6 secondary metabolism.isoprenoids.mevalonate pathway.mevalonate diphosphate decarboxylase GHMP kinase family protein","protein_coding" "LOC_Os02g02040","Os02g0110600","Oryza sativa","30.2.99 signalling.receptor kinases.misc NCRK","protein_coding" "LOC_Os02g02050","Os02g0110700","Oryza sativa","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors MORPHEUS MOLECULE (MOM)","protein_coding" "LOC_Os02g02150","Os02g0111900","Oryza sativa","28.1 DNA.synthesis/chromatin structure nucleic acid bindingATP-dependent helicasesATP bindinghelicasesATP-dependent helicases","protein_coding" "LOC_Os02g02210","Os02g0112900","Oryza sativa","13.1.1.1.2 amino acid metabolism.synthesis.central amino acid metabolism.GABA.GABA transaminase Genetically redundant with POP3mediates pollen tube guidance. Double mutants are self sterile gamma-aminobutyrate transaminase subunit precursor nuclear gene for mitochondrial product. Encodes gamma-aminobutyrate transaminase that uses pyruvate instead of alpha-ketoglutarate as cosubstrate. Mutations in POP2/HER1 render roots resistant to the inhibitory growth effects of the volatile organic compound E-2-hexenal implicated in plant defense. POLLEN-PISTIL INCOMPATIBILITY 2 (POP2)","protein_coding" "LOC_Os02g02290","Os02g0114000","Oryza sativa","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Encodes a SWI/SNF chromatin remodeling ATPase that upregulates transcription of all three CUC genes and is involved in the formation and/or maintenance of boundary cells during embryogenesis. Also mediates repression of expression of seed storage proteins in vegetative tissues. Interacts strongly with AtSWI3C, also with AtSWI3B, but not with AtSWI3A or AtSWI3D. BRAHMA (BRM)","protein_coding" "LOC_Os02g02490","Os02g0116700","Oryza sativa","30.2.10 signalling.receptor kinases.leucine rich repeat X Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ). phytosulfokin receptor 1 (PSKR1)","protein_coding" "LOC_Os02g02640","No alias","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g02670","Os02g0118875","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g02840","Os02g0120800","Oryza sativa","30.5 signalling.G-proteins Encodes a pollen-specific Rop GTPase, member of the Rho family of small GTP binding proteins that interacts with RIC3 and RIC4 to control tip growth in pollen tubes. These three proteins promote the proper targeting of exocytic vesicles in the pollen tube tip. ROP1 activity is regulated by the REN1 GTPase activator protein. RHO-related protein from plants 1 (ROP1)","protein_coding" "LOC_Os02g02860","Os02g0121000","Oryza sativa","29.1.17 protein.aa activation.glutamate-tRNA ligase Glutamate-tRNA ligase. Targeted to mitochondria and chloroplast. Its inactivation causes developmental arrest of chloroplasts and mitochondria in Nicotiana benthamiana. glutamate tRNA synthetase (ERS)","protein_coding" "LOC_Os02g03060","Os02g0123100","Oryza sativa","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "LOC_Os02g03200","Os02g0124400","Oryza sativa","35.1 not assigned.no ontology D-arabinono-1,4-lactone oxidase family protein","protein_coding" "LOC_Os02g03410","Os02g0126400","Oryza sativa","29.4 protein.postranslational modification member of Calcium Dependent Protein Kinase calcium-dependent protein kinase 16 (CPK16)","protein_coding" "LOC_Os02g03610","Os02g0128600","Oryza sativa","No description available","protein_coding" "LOC_Os02g04050","No alias","Oryza sativa","31.2 cell.division Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. TITAN7 (TTN7)","protein_coding" "LOC_Os02g04080","Os02g0133400","Oryza sativa","31.2 cell.division Encodes a member of the Arabidopsis cohesin complex that is essential for viability and sister chromatid alignment. TITAN7 (TTN7)","protein_coding" "LOC_Os02g04230","Os02g0135200","Oryza sativa","30.6 signalling.MAP kinases Encodes a protein with similarity to MAP kinases (MAPK9).Expressed preferentially in guard cells and appears to be involved in reactive oxygen species mediated ABA signaling. MAP kinase 9 (MPK9)","protein_coding" "LOC_Os02g04240","Os02g0135300","Oryza sativa","29.4 protein.postranslational modification Protein kinase that negatively regulates the entry into mitosis. WEE1 kinase homolog (WEE1)","protein_coding" "LOC_Os02g04530","Os02g0137900","Oryza sativa","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "LOC_Os02g04840","Os02g0141300","Oryza sativa","10.1.30.2 ell wall.precursor synthesis.sugar kinases.arabinose-1-kinase Similar to galactokinase. arabinose kinase (ARA1)","protein_coding" "LOC_Os02g05330","Os02g0146600","Oryza sativa","29.2.3 protein.synthesis.initiation eukaryotic translation initiation factor 4A-1 eukaryotic translation initiation factor 4A1 (EIF4A1)","protein_coding" "LOC_Os02g05480","Os02g0148100","Oryza sativa","30.6 signalling.MAP kinases Encodes ATMPK1. mitogen-activated protein kinase 1 (ATMPK1)","protein_coding" "LOC_Os02g05660","Os02g0150100","Oryza sativa","27.1.2 RNA.processing.RNA helicase DEAD-box protein abstrakt, putative","protein_coding" "LOC_Os02g05910","Os02g0153100","Oryza sativa","No description available","protein_coding" "LOC_Os02g05920","Os02g0153200","Oryza sativa","No description available","protein_coding" "LOC_Os02g05930","Os02g0153400","Oryza sativa","No description available","protein_coding" "LOC_Os02g05950","Os02g0153700","Oryza sativa","No description available","protein_coding" "LOC_Os02g05960","Os02g0153900","Oryza sativa","No description available","protein_coding" "LOC_Os02g05980","Os02g0154200","Oryza sativa","No description available","protein_coding" "LOC_Os02g06160","Os02g0156000","Oryza sativa","30.2.19 signalling.receptor kinases.legume-lectin Concanavalin A-like lectin protein kinase family protein","protein_coding" "LOC_Os02g06300","Os02g0157700","Oryza sativa","30.5 signalling.G-proteins Small GTP-binding protein","protein_coding" "LOC_Os02g06490","Os02g0159900","Oryza sativa","No description available","protein_coding" "LOC_Os02g06592","Os02g0161400","Oryza sativa","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors ROOT GROWTH DEFECTIVE 3 (RGD3)","protein_coding" "LOC_Os02g06930","Os02g0165100","Oryza sativa","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Protein kinase superfamily protein","protein_coding" "LOC_Os02g07870","Os02g0175400","Oryza sativa","34.1 transport.p- and v-ATPases Encodes catalytic subunit A of the vacuolar ATP synthase. Mutants are devoid of vacuolar ATPase activity as subunit A is encoded only by this gene and show strong defects in male gametophyte development and in Golgi stack morphology. vacuolar ATP synthase subunit A (VHA-A)","protein_coding" "LOC_Os02g08240","Os02g0179000","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os02g08490","Os02g0181900","Oryza sativa","No description available","protein_coding" "LOC_Os02g08530","Os02g0182600","Oryza sativa","29.4.1.61 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase X Protein kinase superfamily protein","protein_coding" "LOC_Os02g09120","Os02g0183900","Oryza sativa","No description available","protein_coding" "LOC_Os02g09720","Os02g0190300","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems ABC transporter family protein","protein_coding" "LOC_Os02g09960","Os02g0193000","Oryza sativa","30.2.21 signalling.receptor kinases.lysine motif Protein kinase superfamily protein","protein_coding" "LOC_Os02g10550","Os02g0199000","Oryza sativa","No description available","protein_coding" "LOC_Os02g10580","Os02g0199200","Oryza sativa","No description available","protein_coding" "LOC_Os02g10640","Os02g0199900","Oryza sativa","29.5.11.20 protein.degradation.ubiquitin.proteasom AAA-type ATPase family protein","protein_coding" "LOC_Os02g10770","Os02g0201900","Oryza sativa","No description available","protein_coding" "LOC_Os02g10900","Os02g0203500","Oryza sativa","No description available","protein_coding" "LOC_Os02g11050","Os02g0205300","Oryza sativa","29.5.11.20 protein.degradation.ubiquitin.proteasom 26S proteasome AAA-ATPase subunit regulatory particle triple-A ATPase 6A (RPT6A)","protein_coding" "LOC_Os02g11960","Os02g0211000","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems member of ATH subfamily ABC2 homolog 6 (ATH6)","protein_coding" "LOC_Os02g12030","Os02g0211800","Oryza sativa","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os02g12130","Os02g0212900","Oryza sativa","30.2.24 signalling.receptor kinases.S-locus glycoprotein like S-locus lectin protein kinase family protein","protein_coding" "LOC_Os02g12340","Os02g0214633","Oryza sativa","No description available","protein_coding" "LOC_Os02g12400","Os02g0215500","Oryza sativa","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os02g12420","Os02g0215700","Oryza sativa","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os02g12440","Os02g0215900","Oryza sativa","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os02g12660","Os02g0218400","Oryza sativa","29.4.1.59 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "LOC_Os02g12670","Os02g0218600","Oryza sativa","29.4 protein.postranslational modification U-box domain-containing protein kinase family protein","protein_coding" "LOC_Os02g12780","Os02g0220100","Oryza sativa","17.4.1 hormone metabolism.cytokinin.synthesis-degradation It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins. cytokinin oxidase 3 (CKX3)","protein_coding" "LOC_Os02g12840","Os02g0221300","Oryza sativa","29.2.3 protein.synthesis.initiation member of eIF4A - eukaryotic initiation factor 4A eif4a-2 (EIF4A-2)","protein_coding" "LOC_Os02g13570","Os02g0229600","Oryza sativa","No description available","protein_coding" "LOC_Os02g13965","Os02g0234450","Oryza sativa","29.4 protein.postranslational modification S-domain-2 5 (SD2-5)","protein_coding" "LOC_Os02g14090","Os02g0235900","Oryza sativa","26.8 misc.nitrilases, *nitrile lyases, berberine bridge enzymes, reticuline oxidases, troponine reductases FAD-binding Berberine family protein","protein_coding" "LOC_Os02g14110","Os02g0236000","Oryza sativa","13.1.1.2.1 amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase ASPARTATE AMINOTRANSFERASE 1 aspartate aminotransferase 1 (ASP1)","protein_coding" "LOC_Os02g14120","Os02g0236100","Oryza sativa","30.2.2 signalling.receptor kinases.leucine rich repeat II Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os02g14130","Os02g0236200","Oryza sativa","29.4 protein.postranslational modification Encodes a GSK3-like protein kinase. This protein can interact with the BZR1 protein involved in brassinosteroid-mediated signaling in a Y2H assay and promotes BZR1 phosphorylation in protoplasts. SHAGGY-related protein kinase dZeta (SKdZeta)","protein_coding" "LOC_Os02g14929","Os02g0247200","Oryza sativa","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "LOC_Os02g16060","No alias","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g16250","Os02g0262600","Oryza sativa","No description available","protein_coding" "LOC_Os02g16270","Os02g0262800","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g16330","Os02g0263432","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g16660","Os02g0266300","Oryza sativa","31.1 cell.organisation AAA-type ATPase family protein / ankyrin repeat family protein","protein_coding" "LOC_Os02g17304","Os02g0272900","Oryza sativa","20.1 stress.biotic Confers resistance to the biotrophic oomycete, Peronospora parasitica. Encodes an NBS-LRR type R protein with a putative amino-terminal leucine zipper. Fungal protein ATR13 induces RPP13 gene expression and disease resistance. RECOGNITION OF PERONOSPORA PARASITICA 13 (RPP13)","protein_coding" "LOC_Os02g17320","Os02g0273000","Oryza sativa","No description available","protein_coding" "LOC_Os02g17910","Os02g0280400","Oryza sativa","29.4 protein.postranslational modification casein kinase I-like 3 (ckl3)","protein_coding" "LOC_Os02g18000","Os02g0281200","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g18070","No alias","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g18080","Os02g0282000","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g18140","Os02g0282500","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g18180","Os02g0282900","Oryza sativa","27.2 RNA.transcription member of RLI subfamily RNAse l inhibitor protein 2 (RLI2)","protein_coding" "LOC_Os02g18320","Os02g0283800","Oryza sativa","30.2.2 signalling.receptor kinases.leucine rich repeat II leucine-rich repeat transmembrane protein kinase family protein","protein_coding" "LOC_Os02g18430","Os02g0285700","Oryza sativa","29.4 protein.postranslational modification Encodes a putative serine/threonine kinase It is expressed specifically in pollen and appears to function redundantly with AGC1.7 to regulate polarized growth of pollen tubes. AGC kinase 1.5 (AGC1.5)","protein_coding" "LOC_Os02g18450","Os02g0285800","Oryza sativa","29.2.4 protein.synthesis.elongation elongation factor family protein","protein_coding" "LOC_Os02g18510","Os02g0286700","Oryza sativa","20.1 stress.biotic","protein_coding" "LOC_Os02g18670","Os02g0288400","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "LOC_Os02g18700","Os02g0288700","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems encodes an ATP-dependent MRP-like ABC transporter able to transport glutathione-conjugates as well as chlorophyll catabolites. The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim. multidrug resistance-associated protein 3 (MRP3)","protein_coding" "LOC_Os02g19150","Os02g0293500","Oryza sativa","29.5.5 protein.degradation.serine protease CLP protease regulatory subunit CLPX mRNA, nuclear gene CLP protease regulatory subunit X (CLPX)","protein_coding" "LOC_Os02g19450","Os02g0297000","Oryza sativa","No description available","protein_coding" "LOC_Os02g19530","No alias","Oryza sativa","30.2.99 signalling.receptor kinases.misc Induced in response to Salicylic acid. receptor lectin kinase (RLK)","protein_coding" "LOC_Os02g19750","Os02g0300500","Oryza sativa","20.1 stress.biotic","protein_coding" "LOC_Os02g19890","Os02g0301800","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g19924","Os02g0302200","Oryza sativa","16.1.3 secondary metabolism.isoprenoids.tocopherol biosynthesis Tyrosine transaminase family protein","protein_coding" "LOC_Os02g19970","Os02g0302700","Oryza sativa","16.1.3 secondary metabolism.isoprenoids.tocopherol biosynthesis Tyrosine transaminase family protein","protein_coding" "LOC_Os02g20140","Os02g0304500","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os02g20210","Os02g0305300","Oryza sativa","20.1.7 stress.biotic.PR-proteins LRR and NB-ARC domains-containing disease resistance protein","protein_coding" "LOC_Os02g20360","Os02g0306401","Oryza sativa","13.2.6.2 amino acid metabolism.degradation.aromatic aa.tyrosine encodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatment Tyrosine transaminase family protein","protein_coding" "LOC_Os02g20410","Os02g0307000","Oryza sativa","30.5 signalling.G-proteins Guanylate-binding family protein","protein_coding" "LOC_Os02g20460","Os02g0307400","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g20850","Os02g0312600","Oryza sativa","30.5 signalling.G-proteins A member of ROP GTPase gene family Encodes a Rho-like GTP binding protein. RAC-like 3 (RAC3)","protein_coding" "LOC_Os02g21340","Os02g0318450","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems pleiotropic drug resistance 11 (PDR11)","protein_coding" "LOC_Os02g21700","Os02g0322400","Oryza sativa","29.4 protein.postranslational modification member of MEKK subfamily mitogen-activated protein kinase kinase kinase 15 (MAPKKK15)","protein_coding" "LOC_Os02g21710","No alias","Oryza sativa","30.5 signalling.G-proteins member of RAB gene family RAB GTPase homolog B1C (RABB1C)","protein_coding" "LOC_Os02g21750","Os02g0323000","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 11 (PGP11)","protein_coding" "LOC_Os02g21970","Os02g0325100","Oryza sativa","No description available","protein_coding" "LOC_Os02g22140","Os02g0327100","Oryza sativa","No description available","protein_coding" "LOC_Os02g22780","Os02g0332200","Oryza sativa","29.6 protein.folding TCP-1/cpn60 chaperonin family protein","protein_coding" "LOC_Os02g25870","Os02g0456500","Oryza sativa","30.5 signalling.G-proteins Translation elongation factor EF1A/initiation factor IF2gamma family protein","protein_coding" "LOC_Os02g25900","Os02g0456800","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g27200","Os02g0471300","Oryza sativa","26.7 misc.oxidases - copper, flavone etc Encodes a protein with similarity to monooxygenases that are known to degrade salicylic acid (SA). monooxygenase 1 (MO1)","protein_coding" "LOC_Os02g27310","Os02g0472566","Oryza sativa","30.2.17 signalling.receptor kinases.DUF 26 Protein kinase superfamily protein","protein_coding" "LOC_Os02g27500","Os02g0475500","Oryza sativa","No description available","protein_coding" "LOC_Os02g27540","Os02g0476400","Oryza sativa","No description available","protein_coding" "LOC_Os02g27680","No alias","Oryza sativa","No description available","protein_coding" "LOC_Os02g28850","Os02g0489800","Oryza sativa","31.1 cell.organisation Microtubule motor kinesin PAKRP1L/Kinesin-12B. Together with PAKRP1/Kinesin-12A, serve as linkers of the plus ends of antiparallel microtubules in the phragmoplast. KINESIN-12B","protein_coding" "LOC_Os02g29070","Os02g0492300","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os02g29080","No alias","Oryza sativa","No description available","protein_coding" "LOC_Os02g30150","Os02g0504200","Oryza sativa","20.1.7 stress.biotic.PR-proteins NB-ARC domain-containing disease resistance protein","protein_coding" "LOC_Os02g30630","Os02g0510200","Oryza sativa","13.1.4.1.1 amino acid metabolism.synthesis.branched chain group.common.acetolactate synthase Catalyzes the formation of acetolactate from pyruvate, the first step in valine and isoleucine biosynthesis. Requires FAD, thiamine pyrophosphate and Mg. Inhibited by the sulphonylurea herbicide, chlorsulphuron, and the imidazolinone herbicide, imazapyr. The obtained crystal structure of acetohydroxyacid synthase AHAS, EC 2.2.1.6)in complex with herbicides of the sulphonylurea and imidazolinone family reveals the molecular basis for substrate/inhibitor binding. chlorsulfuron/imidazolinone resistant 1 (CSR1)","protein_coding" "LOC_Os02g30900","Os02g0513000","Oryza sativa","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Mutant is defective in perception of Pseudomonas syringae avirulence gene avrPphB. Encodes a putative serine-threonine kinase. avrPphB susceptible 1 (PBS1)","protein_coding" "LOC_Os02g32030","Os02g0519900","Oryza sativa","29.2.4 protein.synthesis.elongation encodes a translation elongation factor 2-like protein that is involved in cold-induced translation. Mutations in this gene specifically blocks low temperature-induced transcription of cold-responsive genes but induces the expression of CBF genes and mutants carrying the recessive mutations fail to acclimate to cold and is freezing sensitive. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 1 (LOS1)","protein_coding" "LOC_Os02g32520","Os02g0526400","Oryza sativa","29.5.5 protein.degradation.serine protease ATP-dependent Clp protease regulatory subunit EARLY RESPONSIVE TO DEHYDRATION 1 (ERD1)","protein_coding" "LOC_Os02g33420","Os02g0537400","Oryza sativa","No description available","protein_coding" "LOC_Os02g33500","Os02g0538000","Oryza sativa","29.1.3 protein.aa activation.threonine-tRNA ligase Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage. EMBRYO DEFECTIVE 2761 (EMB2761)","protein_coding" "LOC_Os02g33710","Os02g0541300","Oryza sativa","13.2.7 amino acid metabolism.degradation.histidine embryo defective 1075 (emb1075)","protein_coding" "LOC_Os02g33850","Os02g0543300","Oryza sativa","29.2.2 protein.synthesis.ribosome biogenesis Ribosomal protein S5/Elongation factor G/III/V family protein","protein_coding" "LOC_Os02g34430","Os02g0549200","Oryza sativa","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "LOC_Os02g34600","Os02g0551100","Oryza sativa","No description available","protein_coding" "LOC_Os02g35010","Os02g0555900","Oryza sativa","30.6 signalling.MAP kinases MEK kinase (MAP3Ka) mitogen-activated protein kinase kinase kinase 3 (MAP3KA)","protein_coding" "LOC_Os02g35130","Os02g0557100","Oryza sativa","20.1 stress.biotic P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os02g35210","Os02g0558400","Oryza sativa","20.1 stress.biotic","protein_coding" "LOC_Os02g35310","Os02g0559400","Oryza sativa","17.7.1.5 hormone metabolism.jasmonate.synthesis-degradation.12-Oxo-PDA-reductase Encodes a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. Predicted to be a cytosolic protein. 12-oxophytodienoate reductase 1 (OPR1)","protein_coding" "LOC_Os02g35320","Os02g0559500","Oryza sativa","26.7 misc.oxidases - copper, flavone etc Encodes a protein with similarity to monooxygenases that are known to degrade salicylic acid (SA). monooxygenase 1 (MO1)","protein_coding" "LOC_Os02g35500","Os02g0562700","Oryza sativa","7.1.3 OPP.oxidative PP.6-phosphogluconate dehydrogenase Encodes gamma-hydroxybutyrate dehydrogenase (AtGHBDH).","protein_coding" "LOC_Os02g35630","Os02g0564400","Oryza sativa","29.5.5 protein.degradation.serine protease CLP protease regulatory subunit CLPX mRNA, nuclear gene CLP protease regulatory subunit X (CLPX)","protein_coding" "LOC_Os02g37010","Os02g0580600","Oryza sativa","26.7 misc.oxidases - copper, flavone etc Flavin-binding monooxygenase family protein","protein_coding" "LOC_Os02g37420","Os02g0586400","Oryza sativa","30.5 signalling.G-proteins member of RAB gene family RAB GTPase homolog B1C (RABB1C)","protein_coding" "LOC_Os02g37830","Os02g0590800","Oryza sativa","No description available","protein_coding" "LOC_Os02g37880","Os02g0591900","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os02g37920","Os02g0592300","Oryza sativa","28.2 DNA.repair Encodes a protein similar to PMS1 in yeast, a member of the family of eukaryotic MutL homologs. The protein appears to play a role in DNA mismatch repair and in the suppression of somatic homeologous recombination. POSTMEIOTIC SEGREGATION 1 (PMS1)","protein_coding" "LOC_Os02g38210","Os02g0595700","Oryza sativa","29.2.4 protein.synthesis.elongation RAB GTPase homolog E1B (RABE1b)","protein_coding" "LOC_Os02g38840","Os02g0600400","Oryza sativa","7.1.1 OPP.oxidative PP.G6PD Encodes a cytosolic glucose-6-phosphate dehydrogenase that is insensitive to reduction by DTT and whose mRNA is expressed ubiquitously. glucose-6-phosphate dehydrogenase 6 (G6PD6)","protein_coding" "LOC_Os02g39010","Os02g0602100","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os02g39090","Os02g0603000","Oryza sativa","No description available","protein_coding" "LOC_Os02g39870","Os02g0612000","Oryza sativa","29.6 protein.folding embryo defective 1241 (EMB1241)","protein_coding" "LOC_Os02g39884","Os02g0612200","Oryza sativa","No description available","protein_coding" "LOC_Os02g40180","No alias","Oryza sativa","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os02g40200","Os02g0615500","Oryza sativa","30.2.12 signalling.receptor kinases.leucine rich repeat XII Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os02g40450","Os02g0617500","Oryza sativa","28.1 DNA.synthesis/chromatin structure DNA helicase required for interference-sensitive meiotic crossover events. ROCK-N-ROLLERS (RCK)","protein_coding" "LOC_Os02g40840","Os02g0621800","Oryza sativa","35.1 not assigned.no ontology Long-chain fatty alcohol dehydrogenase family protein","protein_coding" "LOC_Os02g40860","Os02g0622100","Oryza sativa","29.4 protein.postranslational modification Phosphorylates serine, threonine, and tyrosine dual specificity kinase 1 (ADK1)","protein_coding" "LOC_Os02g41470","Os02g0623500","Oryza sativa","29.1.6 protein.aa activation.lysine-tRNA ligase Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype. OVULE ABORTION 5 (OVA5)","protein_coding" "LOC_Os02g41480","Os02g0623600","Oryza sativa","30.2.25 signalling.receptor kinases.wall associated kinase encodes a wall-associated kinase wall associated kinase 3 (WAK3)","protein_coding" "LOC_Os02g41580","Os02g0625300","Oryza sativa","4.1.16 glycolysis.cytosolic branch.phospho-enol-pyruvate carboxylase kinase (PPCK) Encodes a phosphoenolpyruvate carboxylase kinase that is expressed at highest levels in leaves. Expression is induced by light. phosphoenolpyruvate carboxylase kinase 1 (PPCK1)","protein_coding" "LOC_Os02g41760","Os02g0627900","Oryza sativa","No description available","protein_coding" "LOC_Os02g42110","Os02g0632100","Oryza sativa","30.2.25 signalling.receptor kinases.wall associated kinase encodes a wall-associated kinase wall associated kinase 5 (WAK5)","protein_coding" "LOC_Os02g42160","Os02g0632900","Oryza sativa","30.2.25 signalling.receptor kinases.wall associated kinase Wall-associated kinase family protein","protein_coding" "LOC_Os02g42190","Os02g0633066","Oryza sativa","30.2.25 signalling.receptor kinases.wall associated kinase cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. wall-associated kinase 2 (WAK2)","protein_coding" "LOC_Os02g42406","Os02g0636300","Oryza sativa","27.1.2 RNA.processing.RNA helicase Encodes a DEAD-box RNA helicase that localizes to mitochondria and is essential for regulating cell-to-cell transport via plasmodesmata. embryo defective 1586 (EMB1586)","protein_coding" "LOC_Os02g42620","Os02g0639100","Oryza sativa","30.2.8.2 signalling.receptor kinases.leucine rich repeat VIII.VIII-2 Protein kinase superfamily protein","protein_coding" "LOC_Os02g42780","Os02g0640500","Oryza sativa","30.2.99 signalling.receptor kinases.misc Induced in response to Salicylic acid. receptor lectin kinase (RLK)","protein_coding" "LOC_Os02g42860","Os02g0641800","Oryza sativa","28.1 DNA.synthesis/chromatin structure RNAhelicase-like 8 (RH8)","protein_coding" "LOC_Os02g43050","Os02g0644400","Oryza sativa","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "LOC_Os02g43130","Os02g0645100","Oryza sativa","31.1 cell.organisation ATP binding microtubule motor family protein","protein_coding" "LOC_Os02g43290","Os02g0648100","Oryza sativa","30.2.99 signalling.receptor kinases.misc Protein kinase superfamily protein","protein_coding" "LOC_Os02g43350","Os02g0649700","Oryza sativa","29.5.7 protein.degradation.metalloprotease encodes an FtsH protease that is localized to the chloroplast FTSH protease 7 (ftsh7)","protein_coding" "LOC_Os02g43460","Os02g0650800","Oryza sativa","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors chromatin remodeling 31 (chr31)","protein_coding" "LOC_Os02g43690","Os02g0653800","Oryza sativa","No description available","protein_coding" "LOC_Os02g43740","Os02g0654300","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os02g43870","Os02g0655800","Oryza sativa","30.2.3 signalling.receptor kinases.leucine rich repeat III Protein kinase superfamily protein","protein_coding" "LOC_Os02g44642","Os02g0666300","Oryza sativa","30.6 signalling.MAP kinases Member of MEKK subfamily, a component of the stomatal development regulatory pathway. Mutations in this locus result in embryo lethality. YODA (YDA)","protein_coding" "LOC_Os02g45130","Os02g0672800","Oryza sativa","No description available","protein_coding" "LOC_Os02g45530","Os02g0678300","Oryza sativa","No description available","protein_coding" "LOC_Os02g45570","Os02g0678800","Oryza sativa","27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 4 (GRF4)","protein_coding" "LOC_Os02g45750","Os02g0681632","Oryza sativa","30.2.21 signalling.receptor kinases.lysine motif Protein kinase superfamily protein","protein_coding" "LOC_Os02g46680","Os02g0693700","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 2 (PGP2)","protein_coding" "LOC_Os02g46760","Os02g0694900","Oryza sativa","30.6 signalling.MAP kinases member of MAP Kinase Kinase MAP kinase kinase 10 (MKK10)","protein_coding" "LOC_Os02g46990","Os02g0697600","Oryza sativa","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "LOC_Os02g47020","Os02g0698000","Oryza sativa","1.3.12 PS.calvin cycle.PRK phosphoribulokinase (PRK)","protein_coding" "LOC_Os02g47110","Os02g0699300","Oryza sativa","No description available","protein_coding" "LOC_Os02g47150","Os02g0699700","Oryza sativa","28.1 DNA.synthesis/chromatin structure Encodes a topoisomerase II that is highly expressed in young seedlings. The protein is localized in the nucleus and gene expression levels are increased in proliferative tissues. topoisomerase II (TOPII)","protein_coding" "LOC_Os02g47220","Os02g0700600","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os02g47280","Os02g0701300","Oryza sativa","27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 5 (GRF5)","protein_coding" "LOC_Os02g47410","Os02g0702500","Oryza sativa","29.4 protein.postranslational modification yeast YAK1-related gene 1 (YAK1)","protein_coding" "LOC_Os02g47760","Os02g0706500","Oryza sativa","29.5.9 protein.degradation.AAA type AAA-type ATPase family protein","protein_coding" "LOC_Os02g47860","Os02g0708200","Oryza sativa","23.3.2.2 nucleotide metabolism.salvage.nucleoside kinases.uridine kinase Phosphoribulokinase / Uridine kinase family","protein_coding" "LOC_Os02g47940","Os02g0709200","Oryza sativa","13.1.7.7 amino acid metabolism.synthesis.histidine.histidinol-phosphate aminotransferase Encodes histidinol-phosphate aminotransferase that catalyzes the eighth step in histidine biosynthesis. Loss of function mutations are embryo lethal. histidinol phosphate aminotransferase 1 (HPA1)","protein_coding" "LOC_Os02g48100","Os02g0710800","Oryza sativa","28.99 DNA.unspecified DEAD/DEAH box RNA helicase family protein","protein_coding" "LOC_Os02g48200","Os02g0712600","Oryza sativa","30.2.19 signalling.receptor kinases.legume-lectin Concanavalin A-like lectin protein kinase family protein","protein_coding" "LOC_Os02g48210","Os02g0712700","Oryza sativa","30.2.19 signalling.receptor kinases.legume-lectin Concanavalin A-like lectin protein kinase family protein","protein_coding" "LOC_Os02g49030","Os02g0722001","Oryza sativa","29.1.1 protein.aa activation.tyrosine-tRNA ligase Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial","protein_coding" "LOC_Os02g49040","Os02g0722250","Oryza sativa","29.4 protein.postranslational modification GCN2","protein_coding" "LOC_Os02g49310","Os02g0725000","Oryza sativa","29.4 protein.postranslational modification D6 protein kinase like 2 (D6PKL2)","protein_coding" "LOC_Os02g49980","Os02g0732500","Oryza sativa","29.3.4.99 protein.targeting.secretory pathway.unspecified A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARL GTPases. ADP-ribosylation factor-like A1A (ARLA1A)","protein_coding" "LOC_Os02g50370","Os02g0736600","Oryza sativa","No description available","protein_coding" "LOC_Os02g50550","Os02g0738900","Oryza sativa","26.17 misc.dynamin A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.","protein_coding" "LOC_Os02g50560","Os02g0739000","Oryza sativa","28.1 DNA.synthesis/chromatin structure Allelic to ISE2(increased size exclusion limit of plasmodesmata 2). Mutants maintain dilated plasmodesmata at the embryonic torpedo stage. EMBRYO DEFECTIVE 25 (EMB25)","protein_coding" "LOC_Os02g50680","Os02g0740300","Oryza sativa","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os02g50860","Os02g0742200","Oryza sativa","30.5 signalling.G-proteins A member of ROP GTPase gene family. RAC-like 10 (RAC10)","protein_coding" "LOC_Os02g51080","Os02g0744900","Oryza sativa","No description available","protein_coding" "LOC_Os02g51400","Os02g0749150","Oryza sativa","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os02g52510","Os02g0762800","Oryza sativa","28.2 DNA.repair Encodes RAD54, a member of the SWI2/SNF2 family of DNA-stimulated ATPases. Functions in DNA repair via homologous recombination. homolog of RAD54 (RAD54)","protein_coding" "LOC_Os02g52850","Os02g0767400","Oryza sativa","29.4 protein.postranslational modification S-locus lectin protein kinase family protein","protein_coding" "LOC_Os02g53030","Os02g0769700","Oryza sativa","No description available","protein_coding" "LOC_Os02g53040","Os02g0769800","Oryza sativa","No description available","protein_coding" "LOC_Os02g53500","Os02g0775050","Oryza sativa","No description available","protein_coding" "LOC_Os02g53520","Os02g0775400","Oryza sativa","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os02g53690","Os02g0776900","Oryza sativa","27.3.50 RNA.regulation of transcription.General Transcription Growth regulating factor encoding transcription activator. One of the nine members of a GRF gene family, containing nuclear targeting domain. Involved in leaf development and expressed in root, shoot and flower. growth-regulating factor 5 (GRF5)","protein_coding" "LOC_Os02g53720","Os02g0777400","Oryza sativa","30.2.13 signalling.receptor kinases.leucine rich repeat XIII Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem.","protein_coding" "LOC_Os02g53770","Os02g0778200","Oryza sativa","29.1.5 protein.aa activation.isoleucine-tRNA ligase ovule abortion 2 (OVA2)","protein_coding" "LOC_Os02g54340","Os02g0784700","Oryza sativa","No description available","protein_coding" "LOC_Os02g54590","Os02g0787200","Oryza sativa","29.4.1.59 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX Protein kinase protein with adenine nucleotide alpha hydrolases-like domain","protein_coding" "LOC_Os02g54600","Os02g0787300","Oryza sativa","30.6 signalling.MAP kinases Encodes a mitogen-activated kinase kinase, dual specific protein kinase that is expressed in vegetative tissues and floral buds. Involved in innate immunity. This protein activates MPK3/MPK6 and early-defense genes redundantly with MKK4.In plants with both MKK5 and MKK6 levels reduced by RNAi plants, floral organs do not abscise suggestion a role for both proteins in mediating floral organ abscission. MAP kinase kinase 5 (MKK5)","protein_coding" "LOC_Os02g54900","Os02g0791700","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os02g55260","Os02g0795900","Oryza sativa","28.1 DNA.synthesis/chromatin structure plant DEAD box-like RNA helicase. RNA helicase 1 (RH1)","protein_coding" "LOC_Os02g55410","Os02g0797400","Oryza sativa","28.1 DNA.synthesis/chromatin structure Member of the minichromosome maintenance complex, involved in DNA replication initiation. Abundant in proliferating and endocycling tissues. Localized in the nucleus during G1, S and G2 phases of the cell cycle, and are released into the cytoplasmic compartment during mitosis. Binds chromatin. MINICHROMOSOME MAINTENANCE 5 (MCM5)","protein_coding" "LOC_Os02g55420","Os02g0797500","Oryza sativa","No description available","protein_coding" "LOC_Os02g56000","Os02g0803700","Oryza sativa","No description available","protein_coding" "LOC_Os02g56300","Os02g0806900","Oryza sativa","11.8.1 lipid metabolism.exotics (steroids, squalene etc).sphingolipids Encodes the LCB1 subunit of serine palmitoyltransferase. Together with the LCB2 subunit, forms a functional serine palmitoyltransferase complex, which catalyzes the first reaction of sphingolipid biosynthesis. Knockout of LCB1 was embryo lethal. Partial suppression of LCB1 expression led to smaller plants due to reduced cell expansion. long-chain base1 (LCB1)","protein_coding" "LOC_Os02g56310","Os02g0807000","Oryza sativa","4.3.16 glycolysis.unclear/dually targeted.phospho-enol-pyruvate carboxylase kinase (PEPCK) Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light. phosphoenolpyruvate carboxylase kinase 2 (PPCK2)","protein_coding" "LOC_Os02g56370","Os02g0807800","Oryza sativa","30.2.25 signalling.receptor kinases.wall associated kinase encodes a wall-associated kinase wall associated kinase 5 (WAK5)","protein_coding" "LOC_Os02g56380","Os02g0807900","Oryza sativa","30.2.25 signalling.receptor kinases.wall associated kinase encodes a wall-associated kinase wall associated kinase 3 (WAK3)","protein_coding" "LOC_Os02g56540","Os02g0810200","Oryza sativa","31.1 cell.organisation P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os02g56550","Os02g0810300","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os02g56560","Os02g0810400","Oryza sativa","29.4 protein.postranslational modification casein kinase I-like 10 (ckl10)","protein_coding" "LOC_Os02g57080","Os02g0815900","Oryza sativa","No description available","protein_coding" "LOC_Os02g57560","Os02g0821400","Oryza sativa","29.4.1.54 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IV high overall homology to CRCK1 calmodulin-binding receptor-like cytoplasmic kinase 2 (CRCK2)","protein_coding" "LOC_Os02g57700","Os02g0822900","Oryza sativa","29.4.1.59 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IX U-box domain-containing protein kinase family protein","protein_coding" "LOC_Os02g57980","Os02g0826100","Oryza sativa","27.1.2 RNA.processing.RNA helicase DEA(D/H)-box RNA helicase family protein","protein_coding" "LOC_Os02g58020","Os02g0826500","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems member of GCN subfamily general control non-repressible 3 (GCN3)","protein_coding" "LOC_Os02g58390","Os02g0830700","Oryza sativa","30.2.3 signalling.receptor kinases.leucine rich repeat III Leucine-rich repeat protein kinase family protein","protein_coding" "LOC_Os02g58510","Os02g0831800","Oryza sativa","No description available","protein_coding" "LOC_Os02g58520","Os02g0832000","Oryza sativa","30.3 signalling.calcium calmodulin-domain protein kinase CDPK isoform 5 (CPK5) calmodulin-domain protein kinase 5 (CPK5)","protein_coding" "LOC_Os02g58730","Os02g0834000","Oryza sativa","30.5 signalling.G-proteins A member of ROP GTPase gene family Encodes a Rho-like GTP binding protein. RAC-like 3 (RAC3)","protein_coding" "LOC_Os03g01160","Os03g0101200","Oryza sativa","No description available","protein_coding" "LOC_Os03g01200","Os03g0101700","Oryza sativa","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors SNF2 domain-containing protein / helicase domain-containing protein","protein_coding" "LOC_Os03g01410","No alias","Oryza sativa","30.2.7 signalling.receptor kinases.leucine rich repeat VII Leucine-rich receptor-like protein kinase family protein","protein_coding" "LOC_Os03g01830","Os03g0108600","Oryza sativa","28.1 DNA.synthesis/chromatin structure DEA(D/H)-box RNA helicase family protein","protein_coding" "LOC_Os03g01850","Os03g0108800","Oryza sativa","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "LOC_Os03g02030","Os03g0111100","Oryza sativa","25.8 C1-metabolism.tetrahydrofolate synthase DHFS-FPGS homolog B (DFB)","protein_coding" "LOC_Os03g02190","Os03g0113000","Oryza sativa","30.2.99 signalling.receptor kinases.misc Protein kinase superfamily protein","protein_coding" "LOC_Os03g02200","Os03g0113100","Oryza sativa","23.3.2.3 nucleotide metabolism.salvage.nucleoside kinases.thymidine kinase Thymidine kinase","protein_coding" "LOC_Os03g02290","Os03g0114000","Oryza sativa","31.1 cell.organisation Di-glucose binding protein with Kinesin motor domain","protein_coding" "LOC_Os03g02320","Os03g0114300","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os03g02330","Os03g0114400","Oryza sativa","29.5.9 protein.degradation.AAA type P-loop containing nucleoside triphosphate hydrolases superfamily protein","protein_coding" "LOC_Os03g02410","Os03g0115100","Oryza sativa","10.1.1.2 cell wall.precursor synthesis.NDP sugar pyrophosphorylase.GDP fucose and fucokinase Encodes a bifunctional enzyme that has both L-fucokinase and GDP-L-fucose pyrophosphorylase activities. It catalyzes the two steps of the L-fucose salvage pathway for the generation of activated GDP-L-fucose. This pathway seems to be of minor importance for cell wall polysaccharide biosynthesis compared to the de novo GDP-L-fucose biosynthesis pathway in Arabidopsis. L-fucokinase/GDP-L-fucose pyrophosphorylase (FKGP)","protein_coding" "LOC_Os03g02450","Os03g0115500","Oryza sativa","18 Co-factor and vitamine metabolism Pyridoxamine 5'-phosphate oxidase family protein","protein_coding" "LOC_Os03g02680","Os03g0118400","Oryza sativa","31.3 cell.cycle A-type cyclin-dependent kinase. Together with its specific inhibitor, the Kip-related protein, KRP2 they regulate the mitosis-to-endocycle transition during leaf development. Dominant negative mutations abolish cell division. Loss of function phenotype has reduced fertility with failure to transmit via pollen. Pollen development is arrested at the second mitotic division. Expression is regulated by environmental and chemical signals. Part of the promoter is responsible for expression in trichomes. Functions as a positive regulator of cell proliferation during development of the male gametophyte, embryo and endosperm. Phosphorylation of threonine 161 is required for activation of its associated kinase. cell division control 2 (CDC2)","protein_coding" "LOC_Os03g02700","Os03g0118700","Oryza sativa","No description available","protein_coding" "LOC_Os03g02980","Os03g0122000","Oryza sativa","29.4 protein.postranslational modification Protein kinase superfamily protein","protein_coding" "LOC_Os03g03410","Os03g0125600","Oryza sativa","29.4.1.55 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase V Protein kinase superfamily protein","protein_coding" "LOC_Os03g03460","Os03g0126100","Oryza sativa","27.3.34 RNA.regulation of transcription.Orphan family Encodes a homolog of human CtBP. Mutant has longer and thicker leaves than wild type. Involved in controlling polar cell expansion in the leaf width direction. ANGUSTIFOLIA (AN)","protein_coding" "LOC_Os03g03880","Os03g0130900","Oryza sativa","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "LOC_Os03g03890","Os03g0131000","Oryza sativa","29.4.1.57 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase VII Protein kinase superfamily protein","protein_coding" "LOC_Os03g04050","Os03g0132800","Oryza sativa","29.4.1.52 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase II Encodes BR-signaling kinase 1 (BSK1), one of the three homologous BR-signaling kinases (BSK1, AT4G35230 BSK2, AT5G46570 BSK3, AT4G00710). Mediates signal transduction from receptor kinase BRI1 by functioning as the substrate of BRI1. Plasma membrane localized. BR-signaling kinase 1 (BSK1)","protein_coding" "LOC_Os03g04920","Os03g0142800","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems encodes a high-affinity inositol hexakisphosphate transporter that plays a role in guard cell signaling and phytate storage. It is a member of MRP subfamily / ABC transporter subfamily C. multidrug resistance-associated protein 5 (MRP5)","protein_coding" "LOC_Os03g04970","Os03g0143400","Oryza sativa","29.6 protein.folding mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria. heat shock protein 60 (HSP60)","protein_coding" "LOC_Os03g05280","Os03g0146000","Oryza sativa","No description available","protein_coding" "LOC_Os03g05470","Os03g0148700","Oryza sativa","29.4.1.54 protein.postranslational modification.kinase.receptor like cytoplasmatic kinase IV high overall homology to CRCK1 calmodulin-binding receptor-like cytoplasmic kinase 2 (CRCK2)","protein_coding" "LOC_Os03g05730","Os03g0151800","Oryza sativa","31.2 cell.division ATPase, AAA-type, CDC48 protein","protein_coding" "LOC_Os03g05740","Os03g0151900","Oryza sativa","30.5 signalling.G-proteins Encodes a novel Rab-like GTP-ase that is localized to the peripheral membrane of the endosome. ARA6","protein_coding" "LOC_Os03g05820","Os03g0152900","Oryza sativa","31.1 cell.organisation Encodes the kinesin-like protein PAK has an Armadillo motif tail and is involved in guard cell development in Arabidopsis (from Genbank record AF159052).However, no defect in stomatal complexes has been observed in loss of function mutations. armadillo repeat kinesin 3 (ARK3)","protein_coding" "LOC_Os03g05840","Os03g0153100","Oryza sativa","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "LOC_Os03g05860","Os03g0153100","Oryza sativa","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "LOC_Os03g05880","Os03g0153500","Oryza sativa","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "LOC_Os03g05900","Os03g0153900","Oryza sativa","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "LOC_Os03g05910","Os03g0154000","Oryza sativa","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "LOC_Os03g05920","Os03g0154100","Oryza sativa","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "LOC_Os03g05990","Os03g0155000","Oryza sativa","26.7 misc.oxidases - copper, flavone etc FAD/NAD(P)-binding oxidoreductase family protein","protein_coding" "LOC_Os03g06139","Os03g0157400","Oryza sativa","34.16 transport.ABC transporters and multidrug resistance systems ABC-2 type transporter family protein","protein_coding" "LOC_Os03g06220","Os03g0158200","Oryza sativa","28.1 DNA.synthesis/chromatin structure Encodes a putative DEAD-Box RNA Helicase and has RNA-dependent ATPase activity. Mutant is Sensitive to chilling stress and heat stress. Germination of the mutant is inhibited by ABA. LOS4 may be involved in temperature sensing. Is enriched in the nuclear envelope and also located in the cytoplasm. LOS4 is involved in export of poly A RNA. LOW EXPRESSION OF OSMOTICALLY RESPONSIVE GENES 4 (LOS4)","protein_coding" "LOC_Os03g06654","Os03g0162000","Oryza sativa","26.7 misc.oxidases - copper, flavone etc YUCCA 7 (YUC7)","protein_coding" "LOC_Os03g06920","Os03g0165200","Oryza sativa","27.3.44 RNA.regulation of transcription.Chromatin Remodeling Factors Putative chromatin remodeling protein, member of a plant-specific subfamily of SWI2/SNF2-like proteins. Mutations nearly eliminate non-CpG methylation at a target promoter but do not affect rDNA or centromere methylation. Cooperates with PolIVb to facilitate RNA-directed de novo methylation and silencing of homologous DNA. Endogenous targets include intergenic regions near retrotransposon LTRs or short RNA encoding sequences that might epigenetically regulate adjacent genes. May be used to establish a basal yet reversible level of silencing in euchromatin. DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1 (DRD1)","protein_coding" "LOC_Os03g07570","Os03g0171900","Oryza sativa","No description available","protein_coding" "LOC_Os03g07840","Os03g0174500","Oryza sativa","23.1.2.20 nucleotide metabolism.synthesis.purine.adenylosuccinate synthase encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion