Coexpression cluster: Cluster_114 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 16.18% (11/68) 2.18 2.6e-05 0.004626
GO:0140098 catalytic activity, acting on RNA 7.35% (5/68) 3.61 5.6e-05 0.004983
GO:0016070 RNA metabolic process 8.82% (6/68) 2.9 0.000152 0.009029
GO:0090305 nucleic acid phosphodiester bond hydrolysis 1.47% (1/68) 8.03 0.003833 0.034113
GO:0000469 cleavage involved in rRNA processing 1.47% (1/68) 8.03 0.003833 0.034113
GO:0000154 rRNA modification 1.47% (1/68) 8.03 0.003833 0.034113
GO:0016435 rRNA (guanine) methyltransferase activity 1.47% (1/68) 8.03 0.003833 0.034113
GO:0070476 rRNA (guanine-N7)-methylation 1.47% (1/68) 8.03 0.003833 0.034113
GO:0036265 RNA (guanine-N7)-methylation 1.47% (1/68) 8.03 0.003833 0.034113
GO:0031167 rRNA methylation 1.47% (1/68) 8.03 0.003833 0.034113
GO:0090501 RNA phosphodiester bond hydrolysis 1.47% (1/68) 8.03 0.003833 0.034113
GO:0070475 rRNA base methylation 1.47% (1/68) 8.03 0.003833 0.034113
GO:0034470 ncRNA processing 4.41% (3/68) 3.97 0.000928 0.041294
GO:0006396 RNA processing 4.41% (3/68) 3.0 0.006318 0.044987
GO:0046483 heterocycle metabolic process 10.29% (7/68) 1.7 0.005576 0.045112
GO:0008033 tRNA processing 2.94% (2/68) 4.12 0.005876 0.045472
GO:0006725 cellular aromatic compound metabolic process 10.29% (7/68) 1.71 0.00547 0.046365
GO:1901360 organic cyclic compound metabolic process 10.29% (7/68) 1.67 0.006301 0.046729
GO:0097659 nucleic acid-templated transcription 2.94% (2/68) 3.9 0.007938 0.047101
GO:0006351 transcription, DNA-templated 2.94% (2/68) 3.9 0.007938 0.047101
GO:0090304 nucleic acid metabolic process 8.82% (6/68) 2.3 0.00134 0.047719
GO:0008649 rRNA methyltransferase activity 1.47% (1/68) 7.03 0.007651 0.048641
GO:0140102 catalytic activity, acting on a rRNA 1.47% (1/68) 7.03 0.007651 0.048641
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_71 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_129 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_155 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_226 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_283 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_284 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_336 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_209 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_383 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_91 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_175 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_121 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_119 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_232 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_261 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.027 Gene family Compare
Sequences (68) (download table)

InterPro Domains

GO Terms

Family Terms