Coexpression cluster: Cluster_5 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016070 RNA metabolic process 5.46% (10/183) 2.21 6.7e-05 0.007994
GO:0090304 nucleic acid metabolic process 6.56% (12/183) 1.96 6.6e-05 0.015877
GO:0004540 ribonuclease activity 1.64% (3/183) 4.18 0.000548 0.026288
GO:0009982 pseudouridine synthase activity 1.64% (3/183) 4.1 0.00066 0.0264
GO:0140098 catalytic activity, acting on RNA 3.28% (6/183) 2.44 0.000847 0.029054
GO:0006396 RNA processing 3.28% (6/183) 2.57 0.000533 0.03196
GO:0001522 pseudouridine synthesis 1.64% (3/183) 3.86 0.001082 0.032447
GO:0016866 intramolecular transferase activity 1.64% (3/183) 3.72 0.001439 0.038376
GO:0006139 nucleobase-containing compound metabolic process 7.1% (13/183) 1.36 0.00179 0.039065
GO:0009451 RNA modification 2.19% (4/183) 3.43 0.000499 0.039886
GO:0034470 ncRNA processing 2.19% (4/183) 2.96 0.001742 0.041819
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_31 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_42 0.022 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_76 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_98 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_159 0.021 Archaeplastida Compare
Sequences (183) (download table)

InterPro Domains

GO Terms

Family Terms