Coexpression cluster: Cluster_137 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006520 cellular amino acid metabolic process 6.78% (4/59) 4.21 6.4e-05 0.011812
GO:0051536 iron-sulfur cluster binding 5.08% (3/59) 4.06 0.000768 0.017668
GO:0051540 metal cluster binding 5.08% (3/59) 4.06 0.000768 0.017668
GO:0006082 organic acid metabolic process 6.78% (4/59) 3.42 0.000524 0.019295
GO:0043436 oxoacid metabolic process 6.78% (4/59) 3.48 0.000457 0.021018
GO:0140101 catalytic activity, acting on a tRNA 5.08% (3/59) 4.12 0.000688 0.021088
GO:0005506 iron ion binding 5.08% (3/59) 3.91 0.001045 0.021363
GO:0003723 RNA binding 6.78% (4/59) 3.03 0.001446 0.024188
GO:0006790 sulfur compound metabolic process 3.39% (2/59) 5.14 0.001432 0.026349
GO:0090079 translation regulator activity, nucleic acid binding 3.39% (2/59) 4.84 0.002192 0.026893
GO:0045182 translation regulator activity 3.39% (2/59) 4.84 0.002192 0.026893
GO:0008135 translation factor activity, RNA binding 3.39% (2/59) 4.84 0.002192 0.026893
GO:0140098 catalytic activity, acting on RNA 6.78% (4/59) 3.49 0.000441 0.027052
GO:0019752 carboxylic acid metabolic process 6.78% (4/59) 3.49 0.000441 0.027052
GO:0006418 tRNA aminoacylation for protein translation 3.39% (2/59) 4.71 0.00263 0.030245
GO:0016874 ligase activity 5.08% (3/59) 3.57 0.002067 0.031699
GO:0044281 small molecule metabolic process 8.47% (5/59) 2.3 0.003408 0.034841
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity 1.69% (1/59) 8.23 0.003326 0.035995
GO:0004812 aminoacyl-tRNA ligase activity 3.39% (2/59) 4.28 0.004752 0.038016
GO:0016875 ligase activity, forming carbon-oxygen bonds 3.39% (2/59) 4.28 0.004752 0.038016
GO:0043039 tRNA aminoacylation 3.39% (2/59) 4.33 0.004455 0.039034
GO:0043038 amino acid activation 3.39% (2/59) 4.33 0.004455 0.039034
GO:0043933 protein-containing complex subunit organization 3.39% (2/59) 4.02 0.00672 0.041214
GO:0016043 cellular component organization 5.08% (3/59) 3.19 0.00437 0.042321
GO:0005488 binding 28.81% (17/59) 0.9 0.006703 0.04253
GO:0009228 thiamine biosynthetic process 1.69% (1/59) 7.23 0.00664 0.043637
GO:0006772 thiamine metabolic process 1.69% (1/59) 7.23 0.00664 0.043637
GO:0042723 thiamine-containing compound metabolic process 1.69% (1/59) 7.23 0.00664 0.043637
GO:0042724 thiamine-containing compound biosynthetic process 1.69% (1/59) 7.23 0.00664 0.043637
GO:0071840 cellular component organization or biogenesis 5.08% (3/59) 3.02 0.006009 0.046068
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_125 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_170 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_220 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_31 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_116 0.061 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_175 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_255 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_238 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_17 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_37 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_53 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_59 0.021 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_92 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_98 0.026 Archaeplastida Compare
Oryza sativa HCCA Cluster_156 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_159 0.032 Archaeplastida Compare
Oryza sativa HCCA Cluster_176 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_186 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_217 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.031 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_23 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_172 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_201 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_249 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_304 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_417 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_447 0.039 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_114 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_71 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_115 0.048 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_133 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_158 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_170 0.029 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_176 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_180 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_13 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_39 0.041 Archaeplastida Compare
Zea mays HCCA Cluster_14 0.054 Archaeplastida Compare
Zea mays HCCA Cluster_49 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_160 0.032 Archaeplastida Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms