Coexpression cluster: Cluster_107 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034470 ncRNA processing 6.41% (5/78) 4.51 3e-06 0.000427
GO:0008649 rRNA methyltransferase activity 2.56% (2/78) 7.83 1.9e-05 0.001037
GO:0140102 catalytic activity, acting on a rRNA 2.56% (2/78) 7.83 1.9e-05 0.001037
GO:0034660 ncRNA metabolic process 6.41% (5/78) 3.83 2.7e-05 0.001092
GO:0016070 RNA metabolic process 8.97% (7/78) 2.92 3.8e-05 0.001245
GO:0006139 nucleobase-containing compound metabolic process 12.82% (10/78) 2.21 5.6e-05 0.001306
GO:0090304 nucleic acid metabolic process 10.26% (8/78) 2.61 5e-05 0.001358
GO:0006396 RNA processing 6.41% (5/78) 3.54 7.1e-05 0.001451
GO:0046483 heterocycle metabolic process 12.82% (10/78) 2.09 0.000114 0.001861
GO:0006725 cellular aromatic compound metabolic process 12.82% (10/78) 2.1 0.000109 0.001975
GO:1901360 organic cyclic compound metabolic process 12.82% (10/78) 2.05 0.000139 0.002059
GO:0008033 tRNA processing 3.85% (3/78) 4.51 0.000305 0.004139
GO:0009451 RNA modification 3.85% (3/78) 4.24 0.000526 0.006593
GO:0034641 cellular nitrogen compound metabolic process 12.82% (10/78) 1.79 0.000588 0.006852
GO:0140098 catalytic activity, acting on RNA 5.13% (4/78) 3.09 0.001266 0.012143
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 2.56% (2/78) 5.24 0.001224 0.01247
GO:0008168 methyltransferase activity 5.13% (4/78) 3.12 0.001181 0.012832
GO:0016741 transferase activity, transferring one-carbon groups 5.13% (4/78) 3.01 0.001549 0.014028
GO:0006399 tRNA metabolic process 3.85% (3/78) 3.51 0.002337 0.020045
GO:0016072 rRNA metabolic process 2.56% (2/78) 4.58 0.003109 0.02413
GO:0006364 rRNA processing 2.56% (2/78) 4.58 0.003109 0.02413
GO:0008173 RNA methyltransferase activity 2.56% (2/78) 4.51 0.003444 0.02552
GO:0032259 methylation 2.56% (2/78) 4.31 0.004547 0.02556
GO:0016435 rRNA (guanine) methyltransferase activity 1.28% (1/78) 7.83 0.004397 0.025594
GO:0000154 rRNA modification 1.28% (1/78) 7.83 0.004397 0.025594
GO:0036265 RNA (guanine-N7)-methylation 1.28% (1/78) 7.83 0.004397 0.025594
GO:0070476 rRNA (guanine-N7)-methylation 1.28% (1/78) 7.83 0.004397 0.025594
GO:0031167 rRNA methylation 1.28% (1/78) 7.83 0.004397 0.025594
GO:0070475 rRNA base methylation 1.28% (1/78) 7.83 0.004397 0.025594
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Chlamydomonas reinhardtii HCCA Cluster_108 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_121 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_59 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_146 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_172 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_217 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_121 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_203 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_155 0.043 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_255 0.023 Archaeplastida Compare
Sequences (78) (download table)

InterPro Domains

GO Terms

Family Terms