Coexpression cluster: Cluster_64 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901363 heterocyclic compound binding 31.78% (34/107) 1.77 0.0 0.0
GO:0097159 organic cyclic compound binding 31.78% (34/107) 1.77 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 9.35% (10/107) 3.95 0.0 0.0
GO:0006520 cellular amino acid metabolic process 7.48% (8/107) 4.24 0.0 1e-06
GO:0006082 organic acid metabolic process 8.41% (9/107) 3.64 0.0 1e-06
GO:0043436 oxoacid metabolic process 8.41% (9/107) 3.64 0.0 1e-06
GO:0140101 catalytic activity, acting on a tRNA 6.54% (7/107) 4.48 0.0 1e-06
GO:0019752 carboxylic acid metabolic process 8.41% (9/107) 3.65 0.0 1e-06
GO:0005488 binding 37.38% (40/107) 1.25 0.0 1e-06
GO:0016874 ligase activity 6.54% (7/107) 4.03 0.0 5e-06
GO:0003723 RNA binding 8.41% (9/107) 3.34 0.0 5e-06
GO:0005852 eukaryotic translation initiation factor 3 complex 2.8% (3/107) 6.96 1e-06 1.6e-05
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.67% (5/107) 4.74 1e-06 1.8e-05
GO:0004812 aminoacyl-tRNA ligase activity 4.67% (5/107) 4.74 1e-06 1.8e-05
GO:0036094 small molecule binding 18.69% (20/107) 1.62 6e-06 8.3e-05
GO:0003676 nucleic acid binding 14.02% (15/107) 1.98 6e-06 8.8e-05
GO:0000049 tRNA binding 2.8% (3/107) 5.96 1.2e-05 0.000157
GO:0043168 anion binding 17.76% (19/107) 1.6 1.3e-05 0.000158
GO:0003674 molecular_function 46.73% (50/107) 0.76 1.8e-05 0.00022
GO:0044281 small molecule metabolic process 9.35% (10/107) 2.39 2.1e-05 0.000243
GO:0008652 cellular amino acid biosynthetic process 3.74% (4/107) 4.57 2.3e-05 0.000249
GO:0043038 amino acid activation 3.74% (4/107) 4.47 3e-05 0.000277
GO:0043039 tRNA aminoacylation 3.74% (4/107) 4.47 3e-05 0.000277
GO:0016053 organic acid biosynthetic process 4.67% (5/107) 3.81 2.8e-05 0.000278
GO:0046394 carboxylic acid biosynthetic process 4.67% (5/107) 3.81 2.8e-05 0.000278
GO:0032550 purine ribonucleoside binding 5.61% (6/107) 3.19 5.1e-05 0.000292
GO:0032549 ribonucleoside binding 5.61% (6/107) 3.19 5.1e-05 0.000292
GO:0019001 guanyl nucleotide binding 5.61% (6/107) 3.19 5.1e-05 0.000292
GO:0001883 purine nucleoside binding 5.61% (6/107) 3.19 5.1e-05 0.000292
GO:0001882 nucleoside binding 5.61% (6/107) 3.19 5.1e-05 0.000292
GO:0032561 guanyl ribonucleotide binding 5.61% (6/107) 3.19 5.1e-05 0.000292
GO:0005525 GTP binding 5.61% (6/107) 3.19 5.1e-05 0.000292
GO:0017076 purine nucleotide binding 15.89% (17/107) 1.6 4.1e-05 0.0003
GO:0016070 RNA metabolic process 7.48% (8/107) 2.66 4e-05 0.000306
GO:0006351 transcription, DNA-templated 3.74% (4/107) 4.24 5.7e-05 0.000308
GO:0097659 nucleic acid-templated transcription 3.74% (4/107) 4.24 5.7e-05 0.000308
GO:0032555 purine ribonucleotide binding 15.89% (17/107) 1.6 3.9e-05 0.000308
GO:0000166 nucleotide binding 16.82% (18/107) 1.54 3.8e-05 0.000312
GO:1901265 nucleoside phosphate binding 16.82% (18/107) 1.54 3.8e-05 0.000312
GO:0032553 ribonucleotide binding 15.89% (17/107) 1.58 4.5e-05 0.000324
GO:0035639 purine ribonucleoside triphosphate binding 15.89% (17/107) 1.61 3.7e-05 0.000326
GO:0097367 carbohydrate derivative binding 15.89% (17/107) 1.58 4.9e-05 0.000335
GO:0003743 translation initiation factor activity 2.8% (3/107) 5.15 7.4e-05 0.000392
GO:0046451 diaminopimelate metabolic process 1.87% (2/107) 6.79 0.000108 0.000512
GO:0009085 lysine biosynthetic process 1.87% (2/107) 6.79 0.000108 0.000512
GO:0006553 lysine metabolic process 1.87% (2/107) 6.79 0.000108 0.000512
GO:0043648 dicarboxylic acid metabolic process 1.87% (2/107) 6.79 0.000108 0.000512
GO:0009089 lysine biosynthetic process via diaminopimelate 1.87% (2/107) 6.79 0.000108 0.000512
GO:0044283 small molecule biosynthetic process 4.67% (5/107) 3.22 0.000202 0.000938
GO:0008135 translation factor activity, RNA binding 2.8% (3/107) 4.57 0.000262 0.001172
GO:1901607 alpha-amino acid biosynthetic process 2.8% (3/107) 4.57 0.000262 0.001172
GO:0032774 RNA biosynthetic process 3.74% (4/107) 3.65 0.000292 0.001279
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.8% (3/107) 4.5 0.000302 0.0013
GO:0097747 RNA polymerase activity 2.8% (3/107) 4.43 0.000346 0.001434
GO:0034062 5'-3' RNA polymerase activity 2.8% (3/107) 4.43 0.000346 0.001434
GO:0016779 nucleotidyltransferase activity 3.74% (4/107) 3.47 0.00047 0.001882
GO:0006399 tRNA metabolic process 3.74% (4/107) 3.47 0.00047 0.001882
GO:0009058 biosynthetic process 10.28% (11/107) 1.73 0.000492 0.001936
GO:1901605 alpha-amino acid metabolic process 2.8% (3/107) 4.26 0.000501 0.001937
GO:0009067 aspartate family amino acid biosynthetic process 1.87% (2/107) 5.79 0.000532 0.002022
GO:0006725 cellular aromatic compound metabolic process 10.28% (11/107) 1.71 0.000555 0.002075
GO:0043167 ion binding 17.76% (19/107) 1.17 0.000648 0.002382
GO:0090304 nucleic acid metabolic process 7.48% (8/107) 2.06 0.00067 0.002425
GO:1901360 organic cyclic compound metabolic process 10.28% (11/107) 1.67 0.000691 0.002462
GO:0009066 aspartate family amino acid metabolic process 1.87% (2/107) 5.57 0.000742 0.002563
GO:0044249 cellular biosynthetic process 9.35% (10/107) 1.76 0.000733 0.002571
GO:0019438 aromatic compound biosynthetic process 6.54% (7/107) 2.18 0.00094 0.003198
GO:1901576 organic substance biosynthetic process 9.35% (10/107) 1.71 0.00098 0.003287
GO:0034660 ncRNA metabolic process 3.74% (4/107) 3.05 0.001391 0.004532
GO:1901362 organic cyclic compound biosynthetic process 6.54% (7/107) 2.08 0.00139 0.004592
GO:0052689 carboxylic ester hydrolase activity 1.87% (2/107) 5.05 0.001571 0.005046
GO:0009073 aromatic amino acid family biosynthetic process 1.87% (2/107) 4.91 0.001913 0.006058
GO:0008144 drug binding 12.15% (13/107) 1.32 0.002079 0.006406
GO:0046483 heterocycle metabolic process 9.35% (10/107) 1.56 0.002079 0.006493
GO:0034641 cellular nitrogen compound metabolic process 10.28% (11/107) 1.41 0.002915 0.008861
GO:0009072 aromatic amino acid family metabolic process 1.87% (2/107) 4.57 0.003128 0.009384
GO:1901566 organonitrogen compound biosynthetic process 5.61% (6/107) 2.04 0.003479 0.010301
GO:0006139 nucleobase-containing compound metabolic process 8.41% (9/107) 1.54 0.003805 0.011121
GO:0031369 translation initiation factor binding 0.93% (1/107) 7.37 0.006031 0.014475
GO:0004814 arginine-tRNA ligase activity 0.93% (1/107) 7.37 0.006031 0.014475
GO:0031414 N-terminal protein acetyltransferase complex 0.93% (1/107) 7.37 0.006031 0.014475
GO:0018206 peptidyl-methionine modification 0.93% (1/107) 7.37 0.006031 0.014475
GO:0031417 NatC complex 0.93% (1/107) 7.37 0.006031 0.014475
GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives 0.93% (1/107) 7.37 0.006031 0.014475
GO:0008837 diaminopimelate epimerase activity 0.93% (1/107) 7.37 0.006031 0.014475
GO:0004826 phenylalanine-tRNA ligase activity 0.93% (1/107) 7.37 0.006031 0.014475
GO:0004019 adenylosuccinate synthase activity 0.93% (1/107) 7.37 0.006031 0.014475
GO:0036361 racemase activity, acting on amino acids and derivatives 0.93% (1/107) 7.37 0.006031 0.014475
GO:0006420 arginyl-tRNA aminoacylation 0.93% (1/107) 7.37 0.006031 0.014475
GO:0004107 chorismate synthase activity 0.93% (1/107) 7.37 0.006031 0.014475
GO:0047661 amino-acid racemase activity 0.93% (1/107) 7.37 0.006031 0.014475
GO:0004592 pantoate-beta-alanine ligase activity 0.93% (1/107) 7.37 0.006031 0.014475
GO:0006474 N-terminal protein amino acid acetylation 0.93% (1/107) 7.37 0.006031 0.014475
GO:0017196 N-terminal peptidyl-methionine acetylation 0.93% (1/107) 7.37 0.006031 0.014475
GO:0016879 ligase activity, forming carbon-nitrogen bonds 1.87% (2/107) 4.05 0.006379 0.015149
GO:0018130 heterocycle biosynthetic process 5.61% (6/107) 1.91 0.005303 0.015303
GO:0006418 tRNA aminoacylation for protein translation 1.87% (2/107) 3.85 0.008394 0.019731
GO:0017111 nucleoside-triphosphatase activity 4.67% (5/107) 1.95 0.009779 0.02275
GO:0005524 ATP binding 10.28% (11/107) 1.16 0.010185 0.023221
GO:0034654 nucleobase-containing compound biosynthetic process 4.67% (5/107) 1.93 0.010151 0.023377
GO:0032559 adenyl ribonucleotide binding 10.28% (11/107) 1.15 0.010539 0.02379
GO:0030554 adenyl nucleotide binding 10.28% (11/107) 1.15 0.010811 0.024165
GO:0006323 DNA packaging 0.93% (1/107) 6.37 0.012026 0.024482
GO:0030261 chromosome condensation 0.93% (1/107) 6.37 0.012026 0.024482
GO:0015939 pantothenate metabolic process 0.93% (1/107) 6.37 0.012026 0.024482
GO:0016838 carbon-oxygen lyase activity, acting on phosphates 0.93% (1/107) 6.37 0.012026 0.024482
GO:0031365 N-terminal protein amino acid modification 0.93% (1/107) 6.37 0.012026 0.024482
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 0.93% (1/107) 6.37 0.012026 0.024482
GO:0015940 pantothenate biosynthetic process 0.93% (1/107) 6.37 0.012026 0.024482
GO:0016462 pyrophosphatase activity 4.67% (5/107) 1.89 0.011529 0.025521
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.67% (5/107) 1.88 0.011736 0.02573
GO:0016817 hydrolase activity, acting on acid anhydrides 4.67% (5/107) 1.88 0.011946 0.025939
GO:0070279 vitamin B6 binding 1.87% (2/107) 3.37 0.015888 0.031776
GO:0030170 pyridoxal phosphate binding 1.87% (2/107) 3.37 0.015888 0.031776
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 0.93% (1/107) 5.79 0.017986 0.035049
GO:0004045 aminoacyl-tRNA hydrolase activity 0.93% (1/107) 5.79 0.017986 0.035049
GO:0016854 racemase and epimerase activity 0.93% (1/107) 5.79 0.017986 0.035049
GO:0016887 ATPase activity 2.8% (3/107) 2.39 0.019779 0.038217
GO:0019842 vitamin binding 1.87% (2/107) 3.09 0.023098 0.044254
GO:0070569 uridylyltransferase activity 0.93% (1/107) 5.37 0.02391 0.044683
GO:0031248 protein acetyltransferase complex 0.93% (1/107) 5.37 0.02391 0.044683
GO:1902493 acetyltransferase complex 0.93% (1/107) 5.37 0.02391 0.044683
GO:0005737 cytoplasm 1.87% (2/107) 3.05 0.024219 0.044894
GO:0034645 cellular macromolecule biosynthetic process 3.74% (4/107) 1.84 0.02575 0.047346
GO:0003824 catalytic activity 22.43% (24/107) 0.58 0.02651 0.048354
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_21 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_132 0.031 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_135 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_171 0.028 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_202 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_236 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_237 0.024 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_18 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_47 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_85 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_148 0.024 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_178 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_34 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.038 Gene family Compare
Oryza sativa HCCA cluster Cluster_236 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_274 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_283 0.032 Gene family Compare
Oryza sativa HCCA cluster Cluster_306 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_68 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_69 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_407 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_489 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_36 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_43 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.027 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_96 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_183 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_234 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_235 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_285 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_75 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_136 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_148 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_216 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.09 Gene family Compare
Zea mays HCCA cluster Cluster_185 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_191 0.041 Gene family Compare
Zea mays HCCA cluster Cluster_209 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_274 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_326 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_345 0.035 Gene family Compare
Sequences (107) (download table)

InterPro Domains

GO Terms

Family Terms