Coexpression cluster: Cluster_167 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006082 organic acid metabolic process 25.45% (14/55) 5.33 0.0 0.0
GO:0006520 cellular amino acid metabolic process 21.82% (12/55) 5.9 0.0 0.0
GO:0043436 oxoacid metabolic process 23.64% (13/55) 5.28 0.0 0.0
GO:0019752 carboxylic acid metabolic process 23.64% (13/55) 5.29 0.0 0.0
GO:0044281 small molecule metabolic process 27.27% (15/55) 3.99 0.0 0.0
GO:0043039 tRNA aminoacylation 12.73% (7/55) 6.23 0.0 0.0
GO:0043038 amino acid activation 12.73% (7/55) 6.23 0.0 0.0
GO:0004812 aminoacyl-tRNA ligase activity 12.73% (7/55) 6.19 0.0 0.0
GO:0016875 ligase activity, forming carbon-oxygen bonds 12.73% (7/55) 6.19 0.0 0.0
GO:0006418 tRNA aminoacylation for protein translation 10.91% (6/55) 6.39 0.0 0.0
GO:0016874 ligase activity 14.55% (8/55) 5.09 0.0 0.0
GO:0140101 catalytic activity, acting on a tRNA 12.73% (7/55) 5.44 0.0 0.0
GO:0003824 catalytic activity 50.91% (28/55) 1.77 0.0 0.0
GO:0006399 tRNA metabolic process 12.73% (7/55) 5.23 0.0 0.0
GO:0034660 ncRNA metabolic process 12.73% (7/55) 4.82 0.0 0.0
GO:0003674 molecular_function 63.64% (35/55) 1.22 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 12.73% (7/55) 4.4 0.0 1e-06
GO:0008152 metabolic process 40.0% (22/55) 1.8 0.0 1e-06
GO:0044283 small molecule biosynthetic process 10.91% (6/55) 4.77 0.0 1e-06
GO:0016053 organic acid biosynthetic process 9.09% (5/55) 5.33 0.0 2e-06
GO:0044237 cellular metabolic process 34.55% (19/55) 1.88 0.0 3e-06
GO:0043167 ion binding 30.91% (17/55) 1.98 1e-06 6e-06
GO:0009058 biosynthetic process 20.0% (11/55) 2.73 1e-06 6e-06
GO:0008652 cellular amino acid biosynthetic process 7.27% (4/55) 5.81 1e-06 7e-06
GO:0008150 biological_process 43.64% (24/55) 1.44 1e-06 1.1e-05
GO:0071704 organic substance metabolic process 34.55% (19/55) 1.72 2e-06 1.4e-05
GO:0043168 anion binding 25.45% (14/55) 2.14 2e-06 1.7e-05
GO:1901564 organonitrogen compound metabolic process 27.27% (15/55) 2.01 2e-06 2e-05
GO:0036094 small molecule binding 25.45% (14/55) 2.07 3e-06 2.8e-05
GO:0016070 RNA metabolic process 12.73% (7/55) 3.43 4e-06 2.9e-05
GO:0046394 carboxylic acid biosynthetic process 7.27% (4/55) 5.2 4e-06 3.1e-05
GO:0016491 oxidoreductase activity 16.36% (9/55) 2.77 6e-06 4.3e-05
GO:1901360 organic cyclic compound metabolic process 18.18% (10/55) 2.56 6e-06 4.3e-05
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 3.64% (2/55) 8.33 9e-06 6.5e-05
GO:0044249 cellular biosynthetic process 16.36% (9/55) 2.62 1.3e-05 8.8e-05
GO:0044238 primary metabolic process 30.91% (17/55) 1.64 1.4e-05 9.3e-05
GO:1901576 organic substance biosynthetic process 16.36% (9/55) 2.56 1.8e-05 0.000115
GO:1901605 alpha-amino acid metabolic process 5.45% (3/55) 5.67 2.6e-05 0.000163
GO:0006721 terpenoid metabolic process 3.64% (2/55) 7.75 2.8e-05 0.000166
GO:0016114 terpenoid biosynthetic process 3.64% (2/55) 7.75 2.8e-05 0.000166
GO:0009987 cellular process 34.55% (19/55) 1.43 2.9e-05 0.000167
GO:0055114 obsolete oxidation-reduction process 14.55% (8/55) 2.68 3.1e-05 0.000174
GO:0006725 cellular aromatic compound metabolic process 16.36% (9/55) 2.45 3.4e-05 0.000186
GO:0046483 heterocycle metabolic process 16.36% (9/55) 2.44 3.6e-05 0.00019
GO:0090304 nucleic acid metabolic process 12.73% (7/55) 2.92 3.7e-05 0.000191
GO:1901265 nucleoside phosphate binding 21.82% (12/55) 1.92 5.6e-05 0.00028
GO:0000166 nucleotide binding 21.82% (12/55) 1.92 5.6e-05 0.00028
GO:1901566 organonitrogen compound biosynthetic process 10.91% (6/55) 3.1 6.7e-05 0.000329
GO:0006807 nitrogen compound metabolic process 27.27% (15/55) 1.58 8.1e-05 0.000387
GO:0097159 organic cyclic compound binding 27.27% (15/55) 1.55 0.00011 0.000489
GO:1901363 heterocyclic compound binding 27.27% (15/55) 1.55 0.00011 0.000489
GO:0017076 purine nucleotide binding 20.0% (11/55) 1.93 0.000113 0.000492
GO:0035639 purine ribonucleoside triphosphate binding 20.0% (11/55) 1.94 0.000106 0.000497
GO:0032555 purine ribonucleotide binding 20.0% (11/55) 1.93 0.00011 0.000506
GO:0005488 binding 36.36% (20/55) 1.23 0.000122 0.000513
GO:0032553 ribonucleotide binding 20.0% (11/55) 1.92 0.000122 0.000521
GO:0097367 carbohydrate derivative binding 20.0% (11/55) 1.91 0.000128 0.000526
GO:0034641 cellular nitrogen compound metabolic process 16.36% (9/55) 2.14 0.000172 0.000695
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 5.45% (3/55) 4.67 0.00022 0.000877
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 5.45% (3/55) 4.63 0.000238 0.000932
GO:0006720 isoprenoid metabolic process 3.64% (2/55) 6.33 0.000261 0.000974
GO:0008299 isoprenoid biosynthetic process 3.64% (2/55) 6.33 0.000261 0.000974
GO:0009072 aromatic amino acid family metabolic process 3.64% (2/55) 6.33 0.000261 0.000974
GO:0008610 lipid biosynthetic process 5.45% (3/55) 4.33 0.000442 0.001622
GO:0044255 cellular lipid metabolic process 5.45% (3/55) 4.06 0.000771 0.002745
GO:0006139 nucleobase-containing compound metabolic process 12.73% (7/55) 2.2 0.000766 0.002771
GO:1901607 alpha-amino acid biosynthetic process 3.64% (2/55) 5.53 0.000838 0.002898
GO:0005524 ATP binding 16.36% (9/55) 1.83 0.000836 0.002931
GO:0032559 adenyl ribonucleotide binding 16.36% (9/55) 1.82 0.000865 0.002947
GO:0030554 adenyl nucleotide binding 16.36% (9/55) 1.82 0.000888 0.002981
GO:0016836 hydro-lyase activity 3.64% (2/55) 5.33 0.001101 0.003645
GO:0016835 carbon-oxygen lyase activity 3.64% (2/55) 5.16 0.001399 0.004565
GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process 1.82% (1/55) 8.33 0.0031 0.007359
GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:0050993 dimethylallyl diphosphate metabolic process 1.82% (1/55) 8.33 0.0031 0.007359
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 1.82% (1/55) 8.33 0.0031 0.007359
GO:0003879 ATP phosphoribosyltransferase activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor 1.82% (1/55) 8.33 0.0031 0.007359
GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:0050992 dimethylallyl diphosphate biosynthetic process 1.82% (1/55) 8.33 0.0031 0.007359
GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor 1.82% (1/55) 8.33 0.0031 0.007359
GO:0019682 glyceraldehyde-3-phosphate metabolic process 1.82% (1/55) 8.33 0.0031 0.007359
GO:0046490 isopentenyl diphosphate metabolic process 1.82% (1/55) 8.33 0.0031 0.007359
GO:0009082 branched-chain amino acid biosynthetic process 1.82% (1/55) 8.33 0.0031 0.007359
GO:0009081 branched-chain amino acid metabolic process 1.82% (1/55) 8.33 0.0031 0.007359
GO:0004455 ketol-acid reductoisomerase activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:0006426 glycyl-tRNA aminoacylation 1.82% (1/55) 8.33 0.0031 0.007359
GO:0004820 glycine-tRNA ligase activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:0009240 isopentenyl diphosphate biosynthetic process 1.82% (1/55) 8.33 0.0031 0.007359
GO:0009094 L-phenylalanine biosynthetic process 1.82% (1/55) 8.33 0.0031 0.007359
GO:0015109 chromate transmembrane transporter activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:0003919 FMN adenylyltransferase activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:0004664 prephenate dehydratase activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:0070402 NADPH binding 1.82% (1/55) 8.33 0.0031 0.007359
GO:0015703 chromate transport 1.82% (1/55) 8.33 0.0031 0.007359
GO:0070835 chromium ion transmembrane transporter activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:0004834 tryptophan synthase activity 1.82% (1/55) 8.33 0.0031 0.007359
GO:0017111 nucleoside-triphosphatase activity 7.27% (4/55) 2.68 0.003536 0.008309
GO:0016887 ATPase activity 5.45% (3/55) 3.23 0.004006 0.00932
GO:0016462 pyrophosphatase activity 7.27% (4/55) 2.61 0.004129 0.009514
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 7.27% (4/55) 2.6 0.00427 0.009742
GO:0030170 pyridoxal phosphate binding 3.64% (2/55) 4.33 0.00441 0.009776
GO:0070279 vitamin B6 binding 3.64% (2/55) 4.33 0.00441 0.009776
GO:0016817 hydrolase activity, acting on acid anhydrides 7.27% (4/55) 2.59 0.004341 0.00981
GO:0006558 L-phenylalanine metabolic process 1.82% (1/55) 7.33 0.006191 0.012762
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 1.82% (1/55) 7.33 0.006191 0.012762
GO:0006586 indolalkylamine metabolic process 1.82% (1/55) 7.33 0.006191 0.012762
GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway 1.82% (1/55) 7.33 0.006191 0.012762
GO:0042430 indole-containing compound metabolic process 1.82% (1/55) 7.33 0.006191 0.012762
GO:0009507 chloroplast 1.82% (1/55) 7.33 0.006191 0.012762
GO:0009536 plastid 1.82% (1/55) 7.33 0.006191 0.012762
GO:0006568 tryptophan metabolic process 1.82% (1/55) 7.33 0.006191 0.012762
GO:0019842 vitamin binding 3.64% (2/55) 4.05 0.006497 0.013277
GO:0005737 cytoplasm 3.64% (2/55) 4.01 0.006826 0.013828
GO:0006629 lipid metabolic process 5.45% (3/55) 2.86 0.008134 0.016337
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity 1.82% (1/55) 6.75 0.009272 0.01786
GO:0006529 asparagine biosynthetic process 1.82% (1/55) 6.75 0.009272 0.01786
GO:0006528 asparagine metabolic process 1.82% (1/55) 6.75 0.009272 0.01786
GO:0006081 cellular aldehyde metabolic process 1.82% (1/55) 6.75 0.009272 0.01786
GO:0008565 obsolete protein transporter activity 1.82% (1/55) 6.75 0.009272 0.01786
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.82% (1/55) 6.33 0.012344 0.022842
GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity 1.82% (1/55) 6.33 0.012344 0.022842
GO:0070566 adenylyltransferase activity 1.82% (1/55) 6.33 0.012344 0.022842
GO:0047952 glycerol-3-phosphate dehydrogenase [NAD(P)+] activity 1.82% (1/55) 6.33 0.012344 0.022842
GO:0033743 peptide-methionine (R)-S-oxide reductase activity 1.82% (1/55) 6.33 0.012344 0.022842
GO:0016829 lyase activity 5.45% (3/55) 2.54 0.014791 0.027155
GO:0009073 aromatic amino acid family biosynthetic process 1.82% (1/55) 6.01 0.015407 0.027638
GO:0044106 cellular amine metabolic process 1.82% (1/55) 6.01 0.015407 0.027638
GO:0006576 cellular biogenic amine metabolic process 1.82% (1/55) 6.01 0.015407 0.027638
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 1.82% (1/55) 5.75 0.01846 0.031209
GO:0072593 reactive oxygen species metabolic process 1.82% (1/55) 5.75 0.01846 0.031209
GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor 1.82% (1/55) 5.75 0.01846 0.031209
GO:0004784 superoxide dismutase activity 1.82% (1/55) 5.75 0.01846 0.031209
GO:0006547 histidine metabolic process 1.82% (1/55) 5.75 0.01846 0.031209
GO:0006801 superoxide metabolic process 1.82% (1/55) 5.75 0.01846 0.031209
GO:0000105 histidine biosynthetic process 1.82% (1/55) 5.75 0.01846 0.031209
GO:0009067 aspartate family amino acid biosynthetic process 1.82% (1/55) 5.75 0.01846 0.031209
GO:0006771 riboflavin metabolic process 1.82% (1/55) 5.53 0.021504 0.034851
GO:0016763 transferase activity, transferring pentosyl groups 1.82% (1/55) 5.53 0.021504 0.034851
GO:0009231 riboflavin biosynthetic process 1.82% (1/55) 5.53 0.021504 0.034851
GO:0042726 flavin-containing compound metabolic process 1.82% (1/55) 5.53 0.021504 0.034851
GO:0042727 flavin-containing compound biosynthetic process 1.82% (1/55) 5.53 0.021504 0.034851
GO:0009066 aspartate family amino acid metabolic process 1.82% (1/55) 5.53 0.021504 0.034851
GO:0009308 amine metabolic process 1.82% (1/55) 5.33 0.024539 0.039497
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor 1.82% (1/55) 5.01 0.03058 0.048557
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 1.82% (1/55) 5.01 0.03058 0.048557
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_57 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.047 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_125 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_184 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_141 0.05 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_175 0.06 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_99 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_15 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_18 0.025 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_29 0.022 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_53 0.034 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_86 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_64 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_153 0.028 Archaeplastida Compare
Gingko biloba HCCA Cluster_238 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_59 0.053 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_92 0.051 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_143 0.038 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_179 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_47 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_156 0.034 Archaeplastida Compare
Oryza sativa HCCA Cluster_159 0.033 Archaeplastida Compare
Oryza sativa HCCA Cluster_186 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_287 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_322 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.056 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_23 0.04 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_126 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_148 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_172 0.042 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_221 0.028 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_307 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_4 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_69 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_340 0.026 Archaeplastida Compare
Picea abies HCCA Cluster_417 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_458 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_148 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_170 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_101 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_115 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_135 0.052 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_170 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_176 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_237 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_6 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_39 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_78 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_188 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_221 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_1 0.037 Archaeplastida Compare
Zea mays HCCA Cluster_14 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_55 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_226 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_256 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_273 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.02 Archaeplastida Compare
Sequences (55) (download table)

InterPro Domains

GO Terms

Family Terms