Coexpression cluster: Cluster_111 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006457 protein folding 5.98% (7/117) 5.8 0.0 0.0
GO:0006520 cellular amino acid metabolic process 7.69% (9/117) 4.39 0.0 0.0
GO:0006418 tRNA aminoacylation for protein translation 5.13% (6/117) 5.31 0.0 1e-06
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.13% (6/117) 4.88 0.0 1e-06
GO:0004812 aminoacyl-tRNA ligase activity 5.13% (6/117) 4.88 0.0 1e-06
GO:0043436 oxoacid metabolic process 7.69% (9/117) 3.66 0.0 1e-06
GO:0006082 organic acid metabolic process 7.69% (9/117) 3.61 0.0 1e-06
GO:0030554 adenyl nucleotide binding 18.8% (22/117) 2.02 0.0 1e-06
GO:0043038 amino acid activation 5.13% (6/117) 4.92 0.0 1e-06
GO:0043039 tRNA aminoacylation 5.13% (6/117) 4.92 0.0 1e-06
GO:0019752 carboxylic acid metabolic process 7.69% (9/117) 3.67 0.0 2e-06
GO:0017076 purine nucleotide binding 19.66% (23/117) 1.9 0.0 2e-06
GO:0036094 small molecule binding 20.51% (24/117) 1.76 0.0 2e-06
GO:0000166 nucleotide binding 19.66% (23/117) 1.77 0.0 4e-06
GO:1901265 nucleoside phosphate binding 19.66% (23/117) 1.77 0.0 4e-06
GO:0005524 ATP binding 17.09% (20/117) 1.89 0.0 6e-06
GO:0032559 adenyl ribonucleotide binding 17.09% (20/117) 1.89 0.0 6e-06
GO:0140098 catalytic activity, acting on RNA 6.84% (8/117) 3.5 1e-06 8e-06
GO:0035639 purine ribonucleoside triphosphate binding 17.95% (21/117) 1.78 1e-06 9e-06
GO:0032555 purine ribonucleotide binding 17.95% (21/117) 1.78 1e-06 9e-06
GO:0043168 anion binding 18.8% (22/117) 1.7 1e-06 9e-06
GO:0032553 ribonucleotide binding 17.95% (21/117) 1.76 1e-06 9e-06
GO:0097367 carbohydrate derivative binding 17.95% (21/117) 1.75 1e-06 9e-06
GO:0097159 organic cyclic compound binding 24.79% (29/117) 1.41 1e-06 9e-06
GO:1901363 heterocyclic compound binding 24.79% (29/117) 1.41 1e-06 9e-06
GO:0140101 catalytic activity, acting on a tRNA 5.13% (6/117) 4.13 1e-06 1.2e-05
GO:0006399 tRNA metabolic process 5.13% (6/117) 3.92 3e-06 2.7e-05
GO:0043167 ion binding 21.37% (25/117) 1.45 3e-06 3e-05
GO:0005488 binding 32.48% (38/117) 1.07 3e-06 3.2e-05
GO:0051087 chaperone binding 2.56% (3/117) 6.24 6e-06 5e-05
GO:0060590 ATPase regulator activity 2.56% (3/117) 6.02 1e-05 8.4e-05
GO:0003674 molecular_function 46.15% (54/117) 0.75 1e-05 8.8e-05
GO:0016874 ligase activity 5.13% (6/117) 3.58 1.1e-05 8.9e-05
GO:0034660 ncRNA metabolic process 5.13% (6/117) 3.51 1.5e-05 0.000116
GO:0051082 unfolded protein binding 2.56% (3/117) 5.24 5.9e-05 0.000454
GO:0016887 ATPase activity 5.13% (6/117) 3.14 6.1e-05 0.000461
GO:0016070 RNA metabolic process 6.84% (8/117) 2.53 7.6e-05 0.000556
GO:0000774 adenyl-nucleotide exchange factor activity 1.71% (2/117) 6.66 0.000129 0.000869
GO:0042802 identical protein binding 1.71% (2/117) 6.66 0.000129 0.000869
GO:0042803 protein homodimerization activity 1.71% (2/117) 6.66 0.000129 0.000869
GO:0005737 cytoplasm 3.42% (4/117) 3.92 0.000137 0.0009
GO:0060589 nucleoside-triphosphatase regulator activity 2.56% (3/117) 4.83 0.000147 0.000945
GO:0044281 small molecule metabolic process 7.69% (9/117) 2.16 0.00019 0.001192
GO:0008150 biological_process 29.06% (34/117) 0.85 0.00029 0.001781
GO:0008652 cellular amino acid biosynthetic process 2.56% (3/117) 4.31 0.00045 0.002698
GO:0090304 nucleic acid metabolic process 6.84% (8/117) 2.02 0.000826 0.004747
GO:0009058 biosynthetic process 9.4% (11/117) 1.64 0.000822 0.004827
GO:0030234 enzyme regulator activity 2.56% (3/117) 3.83 0.001206 0.006784
GO:0008152 metabolic process 21.37% (25/117) 0.9 0.001469 0.008095
GO:0009987 cellular process 23.08% (27/117) 0.85 0.001533 0.008277
GO:0046394 carboxylic acid biosynthetic process 2.56% (3/117) 3.7 0.001569 0.008305
GO:0017111 nucleoside-triphosphatase activity 5.13% (6/117) 2.17 0.002221 0.011534
GO:0016053 organic acid biosynthetic process 2.56% (3/117) 3.51 0.002312 0.011778
GO:0016462 pyrophosphatase activity 5.13% (6/117) 2.11 0.00276 0.013801
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 5.13% (6/117) 2.09 0.002892 0.014197
GO:0016817 hydrolase activity, acting on acid anhydrides 5.13% (6/117) 2.09 0.00296 0.01427
GO:0098772 molecular function regulator 2.56% (3/117) 3.34 0.003242 0.015358
GO:0036361 racemase activity, acting on amino acids and derivatives 0.85% (1/117) 7.24 0.006595 0.021453
GO:0045905 positive regulation of translational termination 0.85% (1/117) 7.24 0.006595 0.021453
GO:0006417 regulation of translation 0.85% (1/117) 7.24 0.006595 0.021453
GO:0006448 regulation of translational elongation 0.85% (1/117) 7.24 0.006595 0.021453
GO:0006449 regulation of translational termination 0.85% (1/117) 7.24 0.006595 0.021453
GO:0006452 translational frameshifting 0.85% (1/117) 7.24 0.006595 0.021453
GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives 0.85% (1/117) 7.24 0.006595 0.021453
GO:0051247 positive regulation of protein metabolic process 0.85% (1/117) 7.24 0.006595 0.021453
GO:0010608 posttranscriptional regulation of gene expression 0.85% (1/117) 7.24 0.006595 0.021453
GO:0010628 positive regulation of gene expression 0.85% (1/117) 7.24 0.006595 0.021453
GO:0008837 diaminopimelate epimerase activity 0.85% (1/117) 7.24 0.006595 0.021453
GO:0045901 positive regulation of translational elongation 0.85% (1/117) 7.24 0.006595 0.021453
GO:0034250 positive regulation of cellular amide metabolic process 0.85% (1/117) 7.24 0.006595 0.021453
GO:0045727 positive regulation of translation 0.85% (1/117) 7.24 0.006595 0.021453
GO:0043244 regulation of protein-containing complex disassembly 0.85% (1/117) 7.24 0.006595 0.021453
GO:0043243 positive regulation of protein-containing complex disassembly 0.85% (1/117) 7.24 0.006595 0.021453
GO:0009098 leucine biosynthetic process 0.85% (1/117) 7.24 0.006595 0.021453
GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity 0.85% (1/117) 7.24 0.006595 0.021453
GO:0004176 ATP-dependent peptidase activity 0.85% (1/117) 7.24 0.006595 0.021453
GO:0034248 regulation of cellular amide metabolic process 0.85% (1/117) 7.24 0.006595 0.021453
GO:0006551 leucine metabolic process 0.85% (1/117) 7.24 0.006595 0.021453
GO:0003852 2-isopropylmalate synthase activity 0.85% (1/117) 7.24 0.006595 0.021453
GO:0047661 amino-acid racemase activity 0.85% (1/117) 7.24 0.006595 0.021453
GO:0032270 positive regulation of cellular protein metabolic process 0.85% (1/117) 7.24 0.006595 0.021453
GO:0004827 proline-tRNA ligase activity 0.85% (1/117) 7.24 0.006595 0.021453
GO:0006433 prolyl-tRNA aminoacylation 0.85% (1/117) 7.24 0.006595 0.021453
GO:0016779 nucleotidyltransferase activity 2.56% (3/117) 2.92 0.00728 0.023399
GO:0090079 translation regulator activity, nucleic acid binding 1.71% (2/117) 3.85 0.008344 0.025894
GO:0008135 translation factor activity, RNA binding 1.71% (2/117) 3.85 0.008344 0.025894
GO:0045182 translation regulator activity 1.71% (2/117) 3.85 0.008344 0.025894
GO:0006725 cellular aromatic compound metabolic process 7.69% (9/117) 1.36 0.008657 0.026561
GO:0046483 heterocycle metabolic process 7.69% (9/117) 1.35 0.008963 0.02719
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 1.71% (2/117) 3.79 0.009139 0.027416
GO:0097747 RNA polymerase activity 1.71% (2/117) 3.72 0.009966 0.028934
GO:0032259 methylation 1.71% (2/117) 3.72 0.009966 0.028934
GO:0034062 5'-3' RNA polymerase activity 1.71% (2/117) 3.72 0.009966 0.028934
GO:1901360 organic cyclic compound metabolic process 7.69% (9/117) 1.32 0.010383 0.029824
GO:0044283 small molecule biosynthetic process 2.56% (3/117) 2.68 0.01154 0.032799
GO:0051173 positive regulation of nitrogen compound metabolic process 0.85% (1/117) 6.24 0.013147 0.033174
GO:0043022 ribosome binding 0.85% (1/117) 6.24 0.013147 0.033174
GO:0031325 positive regulation of cellular metabolic process 0.85% (1/117) 6.24 0.013147 0.033174
GO:0031072 heat shock protein binding 0.85% (1/117) 6.24 0.013147 0.033174
GO:0009396 folic acid-containing compound biosynthetic process 0.85% (1/117) 6.24 0.013147 0.033174
GO:0010557 positive regulation of macromolecule biosynthetic process 0.85% (1/117) 6.24 0.013147 0.033174
GO:0031328 positive regulation of cellular biosynthetic process 0.85% (1/117) 6.24 0.013147 0.033174
GO:0009893 positive regulation of metabolic process 0.85% (1/117) 6.24 0.013147 0.033174
GO:0009891 positive regulation of biosynthetic process 0.85% (1/117) 6.24 0.013147 0.033174
GO:0010604 positive regulation of macromolecule metabolic process 0.85% (1/117) 6.24 0.013147 0.033174
GO:0003824 catalytic activity 23.08% (27/117) 0.63 0.012084 0.033987
GO:0046983 protein dimerization activity 1.71% (2/117) 3.54 0.012639 0.035181
GO:0006139 nucleobase-containing compound metabolic process 6.84% (8/117) 1.3 0.016067 0.040168
GO:0046451 diaminopimelate metabolic process 0.85% (1/117) 5.66 0.019656 0.045359
GO:0006553 lysine metabolic process 0.85% (1/117) 5.66 0.019656 0.045359
GO:0006383 transcription by RNA polymerase III 0.85% (1/117) 5.66 0.019656 0.045359
GO:0016778 diphosphotransferase activity 0.85% (1/117) 5.66 0.019656 0.045359
GO:0016854 racemase and epimerase activity 0.85% (1/117) 5.66 0.019656 0.045359
GO:0006760 folic acid-containing compound metabolic process 0.85% (1/117) 5.66 0.019656 0.045359
GO:0043648 dicarboxylic acid metabolic process 0.85% (1/117) 5.66 0.019656 0.045359
GO:0009089 lysine biosynthetic process via diaminopimelate 0.85% (1/117) 5.66 0.019656 0.045359
GO:0009085 lysine biosynthetic process 0.85% (1/117) 5.66 0.019656 0.045359
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_104 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_180 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_197 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_241 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_7 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_33 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_49 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_75 0.028 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_175 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_181 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_199 0.026 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_226 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_29 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_49 0.035 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_35 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_64 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_98 0.033 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_132 0.024 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_142 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_165 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_178 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_10 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_79 0.057 Archaeplastida Compare
Oryza sativa HCCA Cluster_142 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_175 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_176 0.046 Archaeplastida Compare
Oryza sativa HCCA Cluster_210 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_308 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_312 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_8 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_27 0.036 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_61 0.037 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_125 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_168 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_172 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_203 0.026 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_229 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_212 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_237 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_333 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_410 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_411 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.035 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.034 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_19 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_67 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_138 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_4 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_9 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_14 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_135 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_161 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_197 0.048 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_270 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_3 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_61 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_194 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_20 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_42 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_55 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_59 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_84 0.045 Archaeplastida Compare
Zea mays HCCA Cluster_162 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_226 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_251 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_254 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_256 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.04 Archaeplastida Compare
Sequences (117) (download table)

InterPro Domains

GO Terms

Family Terms