Coexpression cluster: Cluster_170 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043254 regulation of protein-containing complex assembly 1.85% (1/54) 6.77 0.009104 0.034562
GO:0032273 positive regulation of protein polymerization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0005885 Arp2/3 protein complex 1.85% (1/54) 6.77 0.009104 0.034562
GO:0007015 actin filament organization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0008064 regulation of actin polymerization or depolymerization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0034314 Arp2/3 complex-mediated actin nucleation 1.85% (1/54) 6.77 0.009104 0.034562
GO:0045010 actin nucleation 1.85% (1/54) 6.77 0.009104 0.034562
GO:0110053 regulation of actin filament organization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0097435 supramolecular fiber organization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0044089 positive regulation of cellular component biogenesis 1.85% (1/54) 6.77 0.009104 0.034562
GO:0090066 regulation of anatomical structure size 1.85% (1/54) 6.77 0.009104 0.034562
GO:0032970 regulation of actin filament-based process 1.85% (1/54) 6.77 0.009104 0.034562
GO:0032956 regulation of actin cytoskeleton organization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0010638 positive regulation of organelle organization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0051495 positive regulation of cytoskeleton organization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0032271 regulation of protein polymerization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0032535 regulation of cellular component size 1.85% (1/54) 6.77 0.009104 0.034562
GO:0031334 positive regulation of protein-containing complex assembly 1.85% (1/54) 6.77 0.009104 0.034562
GO:0030838 positive regulation of actin filament polymerization 1.85% (1/54) 6.77 0.009104 0.034562
GO:1902903 regulation of supramolecular fiber organization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0030833 regulation of actin filament polymerization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0030832 regulation of actin filament length 1.85% (1/54) 6.77 0.009104 0.034562
GO:1902905 positive regulation of supramolecular fiber organization 1.85% (1/54) 6.77 0.009104 0.034562
GO:0030041 actin filament polymerization 1.85% (1/54) 8.36 0.003044 0.036705
GO:0009226 nucleotide-sugar biosynthetic process 1.85% (1/54) 8.36 0.003044 0.036705
GO:0004615 phosphomannomutase activity 1.85% (1/54) 8.36 0.003044 0.036705
GO:0009298 GDP-mannose biosynthetic process 1.85% (1/54) 8.36 0.003044 0.036705
GO:0061608 nuclear import signal receptor activity 1.85% (1/54) 8.36 0.003044 0.036705
GO:0140142 nucleocytoplasmic carrier activity 1.85% (1/54) 8.36 0.003044 0.036705
GO:0034504 protein localization to nucleus 1.85% (1/54) 8.36 0.003044 0.036705
GO:0051170 import into nucleus 1.85% (1/54) 8.36 0.003044 0.036705
GO:0051258 protein polymerization 1.85% (1/54) 8.36 0.003044 0.036705
GO:0006606 protein import into nucleus 1.85% (1/54) 8.36 0.003044 0.036705
GO:0004134 4-alpha-glucanotransferase activity 1.85% (1/54) 8.36 0.003044 0.036705
GO:0004133 glycogen debranching enzyme activity 1.85% (1/54) 8.36 0.003044 0.036705
GO:0019673 GDP-mannose metabolic process 1.85% (1/54) 8.36 0.003044 0.036705
GO:0008154 actin polymerization or depolymerization 1.85% (1/54) 8.36 0.003044 0.036705
GO:0009225 nucleotide-sugar metabolic process 1.85% (1/54) 8.36 0.003044 0.036705
GO:0006886 intracellular protein transport 3.7% (2/54) 3.72 0.010146 0.037817
GO:0033043 regulation of organelle organization 1.85% (1/54) 6.36 0.012121 0.038824
GO:0051493 regulation of cytoskeleton organization 1.85% (1/54) 6.36 0.012121 0.038824
GO:0004565 beta-galactosidase activity 1.85% (1/54) 6.36 0.012121 0.038824
GO:0009341 beta-galactosidase complex 1.85% (1/54) 6.36 0.012121 0.038824
GO:0070569 uridylyltransferase activity 1.85% (1/54) 6.36 0.012121 0.038824
GO:0015925 galactosidase activity 1.85% (1/54) 6.36 0.012121 0.038824
GO:0044087 regulation of cellular component biogenesis 1.85% (1/54) 6.36 0.012121 0.038824
GO:0051130 positive regulation of cellular component organization 1.85% (1/54) 6.36 0.012121 0.038824
GO:0005856 cytoskeleton 1.85% (1/54) 6.36 0.012121 0.038824
GO:0016757 transferase activity, transferring glycosyl groups 5.56% (3/54) 3.3 0.0035 0.039857
GO:1901663 quinone biosynthetic process 1.85% (1/54) 7.36 0.006078 0.041536
GO:0006744 ubiquinone biosynthetic process 1.85% (1/54) 7.36 0.006078 0.041536
GO:0042180 cellular ketone metabolic process 1.85% (1/54) 7.36 0.006078 0.041536
GO:0042181 ketone biosynthetic process 1.85% (1/54) 7.36 0.006078 0.041536
GO:0005092 GDP-dissociation inhibitor activity 1.85% (1/54) 7.36 0.006078 0.041536
GO:0007264 small GTPase mediated signal transduction 1.85% (1/54) 7.36 0.006078 0.041536
GO:0006743 ubiquinone metabolic process 1.85% (1/54) 7.36 0.006078 0.041536
GO:1901661 quinone metabolic process 1.85% (1/54) 7.36 0.006078 0.041536
GO:0015629 actin cytoskeleton 1.85% (1/54) 7.36 0.006078 0.041536
GO:0051649 establishment of localization in cell 3.7% (2/54) 3.41 0.015303 0.04357
GO:0046907 intracellular transport 3.7% (2/54) 3.41 0.015303 0.04357
GO:0020037 heme binding 3.7% (2/54) 3.48 0.013926 0.043922
GO:0017038 protein import 1.85% (1/54) 5.77 0.018127 0.044238
GO:0006913 nucleocytoplasmic transport 1.85% (1/54) 5.77 0.018127 0.044238
GO:0051128 regulation of cellular component organization 1.85% (1/54) 5.77 0.018127 0.044238
GO:0051169 nuclear transport 1.85% (1/54) 5.77 0.018127 0.044238
GO:0048522 positive regulation of cellular process 1.85% (1/54) 6.04 0.015128 0.044304
GO:0048518 positive regulation of biological process 1.85% (1/54) 6.04 0.015128 0.044304
GO:0016868 intramolecular transferase activity, phosphotransferases 1.85% (1/54) 6.04 0.015128 0.044304
GO:0140104 molecular carrier activity 1.85% (1/54) 6.04 0.015128 0.044304
GO:0046906 tetrapyrrole binding 3.7% (2/54) 3.45 0.014379 0.044662
GO:0015833 peptide transport 3.7% (2/54) 3.32 0.017225 0.045269
GO:0045184 establishment of protein localization 3.7% (2/54) 3.32 0.017225 0.045269
GO:0015031 protein transport 3.7% (2/54) 3.32 0.017225 0.045269
GO:0042886 amide transport 3.7% (2/54) 3.32 0.017225 0.045269
GO:0065008 regulation of biological quality 3.7% (2/54) 3.32 0.017225 0.045269
GO:0033036 macromolecule localization 3.7% (2/54) 3.29 0.01772 0.045408
GO:0008104 protein localization 3.7% (2/54) 3.29 0.01772 0.045408
GO:0016798 hydrolase activity, acting on glycosyl bonds 3.7% (2/54) 4.0 0.006911 0.045703
GO:0003824 catalytic activity 29.63% (16/54) 0.99 0.004247 0.045822
GO:0051641 cellular localization 3.7% (2/54) 3.23 0.019244 0.046411
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 3.7% (2/54) 3.34 0.016735 0.046995
GO:0008150 biological_process 27.78% (15/54) 0.79 0.020549 0.048982
GO:0005783 endoplasmic reticulum 1.85% (1/54) 5.55 0.021116 0.049757
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_235 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_40 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_82 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_139 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_216 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_114 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_127 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_147 0.036 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_162 0.021 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_167 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_68 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_183 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_79 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_26 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_78 0.031 Archaeplastida Compare
Oryza sativa HCCA Cluster_250 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_135 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_211 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_384 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_105 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_199 0.035 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_79 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_171 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_202 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_233 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_59 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_183 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_312 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_325 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_341 0.026 Archaeplastida Compare
Zea mays HCCA Cluster_356 0.019 Archaeplastida Compare
Sequences (54) (download table)

InterPro Domains

GO Terms

Family Terms