Coexpression cluster: Cluster_93 (HCCA cluster)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0051186 cofactor metabolic process 6.82% (6/88) 4.15 1e-06 0.000272
GO:0003824 catalytic activity 32.95% (29/88) 1.13 2e-05 0.000719
GO:0008152 metabolic process 30.68% (27/88) 1.2 1.8e-05 0.000773
GO:0017144 drug metabolic process 5.68% (5/88) 4.14 9e-06 0.000775
GO:0051188 cofactor biosynthetic process 5.68% (5/88) 4.22 7e-06 0.000888
GO:0003674 molecular_function 48.86% (43/88) 0.82 1.8e-05 0.000901
GO:0009058 biosynthetic process 13.64% (12/88) 2.13 1.7e-05 0.001086
GO:0044283 small molecule biosynthetic process 5.68% (5/88) 3.5 8e-05 0.001695
GO:0006766 vitamin metabolic process 3.41% (3/88) 5.15 7.6e-05 0.001761
GO:0006767 water-soluble vitamin metabolic process 3.41% (3/88) 5.15 7.6e-05 0.001761
GO:0009110 vitamin biosynthetic process 3.41% (3/88) 5.24 6.3e-05 0.001779
GO:0042364 water-soluble vitamin biosynthetic process 3.41% (3/88) 5.24 6.3e-05 0.001779
GO:0006790 sulfur compound metabolic process 3.41% (3/88) 5.07 9.1e-05 0.001782
GO:0033014 tetrapyrrole biosynthetic process 3.41% (3/88) 4.99 0.000108 0.001957
GO:0009236 cobalamin biosynthetic process 2.27% (2/88) 6.66 0.000145 0.002456
GO:0008168 methyltransferase activity 5.68% (5/88) 3.26 0.000175 0.002616
GO:0008150 biological_process 34.09% (30/88) 0.93 0.000206 0.002617
GO:0033013 tetrapyrrole metabolic process 3.41% (3/88) 4.78 0.00017 0.002693
GO:1901576 organic substance biosynthetic process 11.36% (10/88) 1.99 0.000204 0.002725
GO:0016741 transferase activity, transferring one-carbon groups 5.68% (5/88) 3.16 0.000247 0.002725
GO:0016491 oxidoreductase activity 10.23% (9/88) 2.09 0.000261 0.00276
GO:0036094 small molecule binding 17.05% (15/88) 1.49 0.000244 0.002822
GO:1901566 organonitrogen compound biosynthetic process 7.95% (7/88) 2.54 0.0002 0.002823
GO:0009235 cobalamin metabolic process 2.27% (2/88) 6.33 0.000241 0.002914
GO:0048037 cofactor binding 7.95% (7/88) 2.44 0.00031 0.003145
GO:0006081 cellular aldehyde metabolic process 2.27% (2/88) 6.07 0.00036 0.003519
GO:0043167 ion binding 19.32% (17/88) 1.29 0.00045 0.004237
GO:0044249 cellular biosynthetic process 10.23% (9/88) 1.89 0.000698 0.00633
GO:0055114 oxidation-reduction process 9.09% (8/88) 1.97 0.001005 0.008235
GO:0009108 coenzyme biosynthetic process 3.41% (3/88) 3.95 0.000947 0.008296
GO:0044281 small molecule metabolic process 7.95% (7/88) 2.16 0.000985 0.008337
GO:0008144 drug binding 13.64% (12/88) 1.49 0.00112 0.008889
GO:0006732 coenzyme metabolic process 3.41% (3/88) 3.85 0.001177 0.00906
GO:0000166 nucleotide binding 14.77% (13/88) 1.36 0.001558 0.011306
GO:1901265 nucleoside phosphate binding 14.77% (13/88) 1.36 0.001558 0.011306
GO:0043168 anion binding 13.64% (12/88) 1.22 0.005002 0.016082
GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0050992 dimethylallyl diphosphate biosynthetic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0015109 chromate transmembrane transporter activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0051745 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0051073 adenosylcobinamide-GDP ribazoletransferase activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0050993 dimethylallyl diphosphate metabolic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0046490 isopentenyl diphosphate metabolic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0016726 oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor 1.14% (1/88) 7.66 0.00496 0.016153
GO:0006555 methionine metabolic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 1.14% (1/88) 7.66 0.00496 0.016153
GO:0009240 isopentenyl diphosphate biosynthetic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0031419 cobalamin binding 1.14% (1/88) 7.66 0.00496 0.016153
GO:0008172 S-methyltransferase activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0008216 spermidine metabolic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0008215 spermine metabolic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0015703 chromate transport 1.14% (1/88) 7.66 0.00496 0.016153
GO:0006597 spermine biosynthetic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0008939 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0008295 spermidine biosynthetic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0046184 aldehyde biosynthetic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0046500 S-adenosylmethionine metabolic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0008818 cobalamin 5'-phosphate synthase activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0004359 glutaminase activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0006556 S-adenosylmethionine biosynthetic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0004478 methionine adenosyltransferase activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:0042816 vitamin B6 metabolic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0042819 vitamin B6 biosynthetic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0042822 pyridoxal phosphate metabolic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0042823 pyridoxal phosphate biosynthetic process 1.14% (1/88) 7.66 0.00496 0.016153
GO:0004014 adenosylmethionine decarboxylase activity 1.14% (1/88) 7.66 0.00496 0.016153
GO:1901362 organic cyclic compound biosynthetic process 6.82% (6/88) 2.14 0.002462 0.017369
GO:0050662 coenzyme binding 4.55% (4/88) 2.49 0.005732 0.017973
GO:0043436 oxoacid metabolic process 4.55% (4/88) 2.75 0.002998 0.01813
GO:0006082 organic acid metabolic process 4.55% (4/88) 2.75 0.002998 0.01813
GO:0016740 transferase activity 13.64% (12/88) 1.2 0.005725 0.018178
GO:0097159 organic cyclic compound binding 19.32% (17/88) 1.05 0.002933 0.018622
GO:1901363 heterocyclic compound binding 19.32% (17/88) 1.05 0.002933 0.018622
GO:0015103 inorganic anion transmembrane transporter activity 2.27% (2/88) 4.66 0.00279 0.019154
GO:1901564 organonitrogen compound metabolic process 14.77% (13/88) 1.12 0.006293 0.019259
GO:0051287 NAD binding 2.27% (2/88) 4.07 0.006254 0.019373
GO:0019752 carboxylic acid metabolic process 4.55% (4/88) 2.76 0.002909 0.019443
GO:0032553 ribonucleotide binding 12.5% (11/88) 1.24 0.006675 0.020185
GO:0097367 carbohydrate derivative binding 12.5% (11/88) 1.23 0.006937 0.02073
GO:0005524 ATP binding 11.36% (10/88) 1.3 0.00708 0.020911
GO:0032559 adenyl ribonucleotide binding 11.36% (10/88) 1.3 0.007318 0.021366
GO:0030554 adenyl nucleotide binding 11.36% (10/88) 1.29 0.007501 0.02165
GO:0005488 binding 27.27% (24/88) 0.8 0.003732 0.022046
GO:0008509 anion transmembrane transporter activity 2.27% (2/88) 4.33 0.004361 0.025175
GO:0019438 aromatic compound biosynthetic process 5.68% (5/88) 1.97 0.009065 0.025582
GO:0015698 inorganic anion transport 2.27% (2/88) 3.8 0.009054 0.025838
GO:0071704 organic substance metabolic process 19.32% (17/88) 0.88 0.009544 0.02664
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 1.14% (1/88) 6.66 0.009896 0.026741
GO:0009396 folic acid-containing compound biosynthetic process 1.14% (1/88) 6.66 0.009896 0.026741
GO:0004852 uroporphyrinogen-III synthase activity 1.14% (1/88) 6.66 0.009896 0.026741
GO:0018130 heterocycle biosynthetic process 5.68% (5/88) 1.93 0.010105 0.027016
GO:0006820 anion transport 2.27% (2/88) 3.61 0.011624 0.030756
GO:0016887 ATPase activity 3.41% (3/88) 2.67 0.011757 0.030786
GO:0044271 cellular nitrogen compound biosynthetic process 6.82% (6/88) 1.66 0.012105 0.031373
GO:0015098 molybdate ion transmembrane transporter activity 1.14% (1/88) 6.07 0.014808 0.035152
GO:0006596 polyamine biosynthetic process 1.14% (1/88) 6.07 0.014808 0.035152
GO:0009309 amine biosynthetic process 1.14% (1/88) 6.07 0.014808 0.035152
GO:0042401 cellular biogenic amine biosynthetic process 1.14% (1/88) 6.07 0.014808 0.035152
GO:0006595 polyamine metabolic process 1.14% (1/88) 6.07 0.014808 0.035152
GO:0015689 molybdate ion transport 1.14% (1/88) 6.07 0.014808 0.035152
GO:0016778 diphosphotransferase activity 1.14% (1/88) 6.07 0.014808 0.035152
GO:0006760 folic acid-containing compound metabolic process 1.14% (1/88) 6.07 0.014808 0.035152
GO:0097164 ammonium ion metabolic process 1.14% (1/88) 6.07 0.014808 0.035152
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 2.27% (2/88) 3.41 0.015231 0.035822
GO:0035639 purine ribonucleoside triphosphate binding 11.36% (10/88) 1.12 0.016104 0.036851
GO:0019842 vitamin binding 2.27% (2/88) 3.37 0.016003 0.036953
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 2.27% (2/88) 3.37 0.016003 0.036953
GO:0032555 purine ribonucleotide binding 11.36% (10/88) 1.12 0.016549 0.037532
GO:0017076 purine nucleotide binding 11.36% (10/88) 1.11 0.01689 0.037631
GO:0044237 cellular metabolic process 17.05% (15/88) 0.86 0.016855 0.037887
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 1.14% (1/88) 5.66 0.019696 0.042396
GO:0042559 pteridine-containing compound biosynthetic process 1.14% (1/88) 5.66 0.019696 0.042396
GO:0019682 glyceraldehyde-3-phosphate metabolic process 1.14% (1/88) 5.66 0.019696 0.042396
GO:0000096 sulfur amino acid metabolic process 1.14% (1/88) 5.66 0.019696 0.042396
GO:1901617 organic hydroxy compound biosynthetic process 1.14% (1/88) 5.33 0.024559 0.049118
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors 1.14% (1/88) 5.33 0.024559 0.049118
GO:0044106 cellular amine metabolic process 1.14% (1/88) 5.33 0.024559 0.049118
GO:0008113 peptide-methionine (S)-S-oxide reductase activity 1.14% (1/88) 5.33 0.024559 0.049118
GO:0042558 pteridine-containing compound metabolic process 1.14% (1/88) 5.33 0.024559 0.049118
GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor 1.14% (1/88) 5.33 0.024559 0.049118
GO:0006576 cellular biogenic amine metabolic process 1.14% (1/88) 5.33 0.024559 0.049118
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_87 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_132 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_137 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_164 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_192 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_214 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_239 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_253 0.028 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_12 0.021 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_54 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_61 0.027 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_91 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_106 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_112 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_113 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_122 0.02 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_149 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_142 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_147 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_204 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_277 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_205 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_217 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_275 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_370 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_414 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_445 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_483 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_38 0.035 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_206 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_17 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_85 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_92 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_131 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_145 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_148 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_214 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_120 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_180 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_184 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_198 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_203 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_174 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_181 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_199 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_264 0.021 Gene family Compare
Sequences (88) (download table)

InterPro Domains

GO Terms

Family Terms