Coexpression cluster: Cluster_121 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003723 RNA binding 10.34% (6/58) 3.64 8e-06 0.001476
GO:0003676 nucleic acid binding 17.24% (10/58) 2.27 3.4e-05 0.001519
GO:0008175 tRNA methyltransferase activity 3.45% (2/58) 7.67 3.1e-05 0.001866
GO:0034470 ncRNA processing 6.9% (4/58) 4.61 2.1e-05 0.001884
GO:0070972 protein localization to endoplasmic reticulum 3.45% (2/58) 6.45 0.000218 0.002428
GO:0072657 protein localization to membrane 3.45% (2/58) 6.45 0.000218 0.002428
GO:0072599 establishment of protein localization to endoplasmic reticulum 3.45% (2/58) 6.45 0.000218 0.002428
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 3.45% (2/58) 6.45 0.000218 0.002428
GO:0090150 establishment of protein localization to membrane 3.45% (2/58) 6.45 0.000218 0.002428
GO:0006613 cotranslational protein targeting to membrane 3.45% (2/58) 6.45 0.000218 0.002428
GO:0006612 protein targeting to membrane 3.45% (2/58) 6.45 0.000218 0.002428
GO:0045047 protein targeting to ER 3.45% (2/58) 6.45 0.000218 0.002428
GO:0006396 RNA processing 6.9% (4/58) 3.64 0.000296 0.002922
GO:0034660 ncRNA metabolic process 6.9% (4/58) 3.93 0.000135 0.003007
GO:0006605 protein targeting 3.45% (2/58) 6.26 0.00029 0.003041
GO:0048500 signal recognition particle 3.45% (2/58) 6.93 0.000104 0.003097
GO:0008312 7S RNA binding 3.45% (2/58) 6.93 0.000104 0.003097
GO:0008033 tRNA processing 5.17% (3/58) 4.93 0.000126 0.003215
GO:0033365 protein localization to organelle 3.45% (2/58) 5.93 0.000465 0.004137
GO:0072594 establishment of protein localization to organelle 3.45% (2/58) 5.93 0.000465 0.004137
GO:0070727 cellular macromolecule localization 3.45% (2/58) 5.8 0.000567 0.004387
GO:0034613 cellular protein localization 3.45% (2/58) 5.8 0.000567 0.004387
GO:0016070 RNA metabolic process 8.62% (5/58) 2.86 0.00061 0.004524
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 3.45% (2/58) 5.67 0.000679 0.004648
GO:0006886 intracellular protein transport 5.17% (3/58) 4.23 0.000549 0.004654
GO:0140101 catalytic activity, acting on a tRNA 5.17% (3/58) 4.14 0.000654 0.004657
GO:0006399 tRNA metabolic process 5.17% (3/58) 3.93 0.000994 0.006554
GO:0008104 protein localization 5.17% (3/58) 3.8 0.001311 0.006668
GO:0033036 macromolecule localization 5.17% (3/58) 3.8 0.001311 0.006668
GO:0051649 establishment of localization in cell 5.17% (3/58) 3.89 0.001094 0.006713
GO:0046907 intracellular transport 5.17% (3/58) 3.89 0.001094 0.006713
GO:0015833 peptide transport 5.17% (3/58) 3.82 0.001254 0.006766
GO:0045184 establishment of protein localization 5.17% (3/58) 3.82 0.001254 0.006766
GO:0042886 amide transport 5.17% (3/58) 3.82 0.001254 0.006766
GO:0015031 protein transport 5.17% (3/58) 3.82 0.001254 0.006766
GO:0051641 cellular localization 5.17% (3/58) 3.71 0.001554 0.007683
GO:0008173 RNA methyltransferase activity 3.45% (2/58) 4.93 0.001922 0.009245
GO:0071702 organic substance transport 5.17% (3/58) 3.48 0.002445 0.011454
GO:0005488 binding 31.03% (18/58) 0.99 0.002518 0.011493
GO:0071705 nitrogen compound transport 5.17% (3/58) 3.38 0.002988 0.013298
GO:0016426 tRNA (adenine) methyltransferase activity 1.72% (1/58) 8.26 0.003269 0.013533
GO:0016429 tRNA (adenine-N1-)-methyltransferase activity 1.72% (1/58) 8.26 0.003269 0.013533
GO:0004749 ribose phosphate diphosphokinase activity 1.72% (1/58) 8.26 0.003269 0.013533
GO:0090304 nucleic acid metabolic process 8.62% (5/58) 2.27 0.003729 0.015086
GO:0008168 methyltransferase activity 5.17% (3/58) 3.13 0.004909 0.019418
GO:0097159 organic cyclic compound binding 20.69% (12/58) 1.15 0.006575 0.019506
GO:1901363 heterocyclic compound binding 20.69% (12/58) 1.15 0.006575 0.019506
GO:0140098 catalytic activity, acting on RNA 5.17% (3/58) 3.1 0.005174 0.020021
GO:0016423 tRNA (guanine) methyltransferase activity 1.72% (1/58) 7.26 0.006528 0.020034
GO:0005047 signal recognition particle binding 1.72% (1/58) 7.26 0.006528 0.020034
GO:0004809 tRNA (guanine-N2-)-methyltransferase activity 1.72% (1/58) 7.26 0.006528 0.020034
GO:0005786 signal recognition particle, endoplasmic reticulum targeting 1.72% (1/58) 7.26 0.006528 0.020034
GO:0030942 endoplasmic reticulum signal peptide binding 1.72% (1/58) 7.26 0.006528 0.020034
GO:0043527 tRNA methyltransferase complex 1.72% (1/58) 7.26 0.006528 0.020034
GO:0031515 tRNA (m1A) methyltransferase complex 1.72% (1/58) 7.26 0.006528 0.020034
GO:0030488 tRNA methylation 1.72% (1/58) 7.26 0.006528 0.020034
GO:0034708 methyltransferase complex 1.72% (1/58) 7.26 0.006528 0.020034
GO:0016741 transferase activity, transferring one-carbon groups 5.17% (3/58) 3.02 0.00602 0.022798
GO:0009451 RNA modification 3.45% (2/58) 4.09 0.006162 0.02285
GO:0006139 nucleobase-containing compound metabolic process 10.34% (6/58) 1.84 0.006381 0.023179
GO:0046483 heterocycle metabolic process 10.34% (6/58) 1.71 0.009794 0.027241
GO:0008170 N-methyltransferase activity 1.72% (1/58) 6.67 0.009776 0.027622
GO:0016778 diphosphotransferase activity 1.72% (1/58) 6.67 0.009776 0.027622
GO:1990904 ribonucleoprotein complex 5.17% (3/58) 2.74 0.0102 0.027934
GO:0006725 cellular aromatic compound metabolic process 10.34% (6/58) 1.72 0.009634 0.028112
GO:1901360 organic cyclic compound metabolic process 10.34% (6/58) 1.68 0.010885 0.029357
GO:0032040 small-subunit processome 1.72% (1/58) 6.26 0.013014 0.034066
GO:0043021 ribonucleoprotein complex binding 1.72% (1/58) 6.26 0.013014 0.034066
GO:0005048 signal sequence binding 1.72% (1/58) 5.93 0.016242 0.039603
GO:0001510 RNA methylation 1.72% (1/58) 5.93 0.016242 0.039603
GO:0044877 protein-containing complex binding 1.72% (1/58) 5.93 0.016242 0.039603
GO:0005730 nucleolus 1.72% (1/58) 5.93 0.016242 0.039603
GO:0042277 peptide binding 1.72% (1/58) 5.93 0.016242 0.039603
GO:0030684 preribosome 1.72% (1/58) 5.67 0.019459 0.046806
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_61 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_171 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_173 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_197 0.024 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.032 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_98 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_283 0.028 Gene family Compare
Oryza sativa HCCA cluster Cluster_306 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_68 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_399 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_537 0.023 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_102 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_120 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_159 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_197 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_290 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_274 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_301 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_171 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_43 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_186 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_233 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_257 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_310 0.014 Gene family Compare
Sequences (58) (download table)

InterPro Domains

GO Terms

Family Terms