Coexpression cluster: Cluster_93 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008173 RNA methyltransferase activity 4.35% (5/115) 5.27 0.0 1.2e-05
GO:0003676 nucleic acid binding 15.65% (18/115) 2.14 0.0 2e-05
GO:0003723 RNA binding 7.83% (9/115) 3.24 0.0 2.5e-05
GO:0016070 RNA metabolic process 8.7% (10/115) 2.88 1e-06 4.3e-05
GO:0090304 nucleic acid metabolic process 9.57% (11/115) 2.5 4e-06 0.000102
GO:0006396 RNA processing 6.09% (7/115) 3.46 3e-06 0.000107
GO:0008168 methyltransferase activity 6.09% (7/115) 3.36 5e-06 0.000121
GO:0016741 transferase activity, transferring one-carbon groups 6.09% (7/115) 3.26 9e-06 0.000172
GO:0005488 binding 30.43% (35/115) 0.97 3.9e-05 0.000685
GO:0006139 nucleobase-containing compound metabolic process 9.57% (11/115) 1.79 0.000348 0.005463
GO:0046483 heterocycle metabolic process 9.57% (11/115) 1.67 0.000712 0.008596
GO:0006725 cellular aromatic compound metabolic process 9.57% (11/115) 1.67 0.00068 0.008891
GO:0140098 catalytic activity, acting on RNA 4.35% (5/115) 2.85 0.000659 0.009405
GO:1901360 organic cyclic compound metabolic process 9.57% (11/115) 1.63 0.000866 0.009713
GO:0003674 molecular_function 40.0% (46/115) 0.55 0.002228 0.023319
GO:0005515 protein binding 10.43% (12/115) 1.31 0.003247 0.031862
GO:0034641 cellular nitrogen compound metabolic process 9.57% (11/115) 1.37 0.003598 0.033226
GO:1901363 heterocyclic compound binding 17.39% (20/115) 0.9 0.004739 0.039159
GO:0097159 organic cyclic compound binding 17.39% (20/115) 0.9 0.004739 0.039159
GO:0009982 pseudouridine synthase activity 1.74% (2/115) 4.18 0.005316 0.04173
GO:0000339 RNA cap binding 0.87% (1/115) 7.27 0.006482 0.044248
GO:0000340 RNA 7-methylguanosine cap binding 0.87% (1/115) 7.27 0.006482 0.044248
GO:0008378 galactosyltransferase activity 0.87% (1/115) 7.27 0.006482 0.044248
GO:0001522 pseudouridine synthesis 1.74% (2/115) 3.95 0.007333 0.047972
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_229 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_249 0.025 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_88 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_165 0.031 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_169 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_172 0.021 Archaeplastida Compare
Oryza sativa HCCA Cluster_320 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_353 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_231 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_277 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_276 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_14 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_132 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_145 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_213 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_226 0.025 Archaeplastida Compare
Sequences (115) (download table)

InterPro Domains

GO Terms

Family Terms