Coexpression cluster: Cluster_36 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 29.63% (24/81) 3.06 0.0 0.0
GO:0006364 rRNA processing 7.41% (6/81) 6.11 0.0 0.0
GO:0016072 rRNA metabolic process 7.41% (6/81) 6.11 0.0 0.0
GO:0005634 nucleus 11.11% (9/81) 4.3 0.0 0.0
GO:0043227 membrane-bounded organelle 11.11% (9/81) 3.99 0.0 0.0
GO:0043231 intracellular membrane-bounded organelle 11.11% (9/81) 3.99 0.0 0.0
GO:0097159 organic cyclic compound binding 32.1% (26/81) 1.78 0.0 0.0
GO:1901363 heterocyclic compound binding 32.1% (26/81) 1.78 0.0 0.0
GO:0043226 organelle 13.58% (11/81) 3.23 0.0 0.0
GO:0043229 intracellular organelle 13.58% (11/81) 3.24 0.0 0.0
GO:0016070 RNA metabolic process 12.35% (10/81) 3.38 0.0 0.0
GO:0005622 intracellular anatomical structure 13.58% (11/81) 3.13 0.0 1e-06
GO:0034470 ncRNA processing 7.41% (6/81) 4.72 0.0 1e-06
GO:0005488 binding 39.51% (32/81) 1.35 0.0 1e-06
GO:0006396 RNA processing 8.64% (7/81) 3.97 0.0 3e-06
GO:0090304 nucleic acid metabolic process 12.35% (10/81) 2.87 1e-06 9e-06
GO:0034660 ncRNA metabolic process 7.41% (6/81) 4.04 2e-06 1.4e-05
GO:0042254 ribosome biogenesis 3.7% (3/81) 5.9 1.5e-05 0.000105
GO:0022613 ribonucleoprotein complex biogenesis 3.7% (3/81) 5.9 1.5e-05 0.000105
GO:0044085 cellular component biogenesis 3.7% (3/81) 5.77 2e-05 0.000132
GO:0006139 nucleobase-containing compound metabolic process 12.35% (10/81) 2.16 7.8e-05 0.0005
GO:0006725 cellular aromatic compound metabolic process 12.35% (10/81) 2.04 0.00015 0.000922
GO:0046483 heterocycle metabolic process 12.35% (10/81) 2.03 0.000157 0.000923
GO:1901360 organic cyclic compound metabolic process 12.35% (10/81) 2.0 0.000191 0.001074
GO:0005730 nucleolus 2.47% (2/81) 6.45 0.000204 0.001102
GO:0034641 cellular nitrogen compound metabolic process 12.35% (10/81) 1.74 0.000796 0.004131
GO:0017076 purine nucleotide binding 14.81% (12/81) 1.5 0.001023 0.004762
GO:0035639 purine ribonucleoside triphosphate binding 14.81% (12/81) 1.51 0.000958 0.004791
GO:0032555 purine ribonucleotide binding 14.81% (12/81) 1.5 0.000995 0.004796
GO:0032553 ribonucleotide binding 14.81% (12/81) 1.48 0.001101 0.004955
GO:0097367 carbohydrate derivative binding 14.81% (12/81) 1.48 0.001153 0.005019
GO:0003674 molecular_function 43.21% (35/81) 0.66 0.001549 0.006535
GO:0043168 anion binding 14.81% (12/81) 1.36 0.002289 0.008829
GO:1901265 nucleoside phosphate binding 14.81% (12/81) 1.36 0.00227 0.009015
GO:0000166 nucleotide binding 14.81% (12/81) 1.36 0.00227 0.009015
GO:0036094 small molecule binding 14.81% (12/81) 1.29 0.003382 0.012681
GO:0003723 RNA binding 4.94% (4/81) 2.58 0.004595 0.012923
GO:0005732 sno(s)RNA-containing ribonucleoprotein complex 1.23% (1/81) 7.77 0.004566 0.013114
GO:0090501 RNA phosphodiester bond hydrolysis 1.23% (1/81) 7.77 0.004566 0.013114
GO:0090305 nucleic acid phosphodiester bond hydrolysis 1.23% (1/81) 7.77 0.004566 0.013114
GO:0034457 Mpp10 complex 1.23% (1/81) 7.77 0.004566 0.013114
GO:0000469 cleavage involved in rRNA processing 1.23% (1/81) 7.77 0.004566 0.013114
GO:0034062 5'-3' RNA polymerase activity 2.47% (2/81) 4.25 0.004895 0.013216
GO:0097747 RNA polymerase activity 2.47% (2/81) 4.25 0.004895 0.013216
GO:0005524 ATP binding 12.35% (10/81) 1.42 0.003923 0.013939
GO:0032559 adenyl ribonucleotide binding 12.35% (10/81) 1.42 0.004061 0.014057
GO:0030554 adenyl nucleotide binding 12.35% (10/81) 1.41 0.004167 0.014062
GO:0110165 cellular anatomical entity 13.58% (11/81) 1.34 0.003857 0.014073
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.47% (2/81) 4.32 0.004482 0.014408
GO:1990904 ribonucleoprotein complex 2.47% (2/81) 4.32 0.004482 0.014408
GO:0030490 maturation of SSU-rRNA 1.23% (1/81) 6.77 0.009111 0.023207
GO:0030515 snoRNA binding 1.23% (1/81) 6.77 0.009111 0.023207
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.23% (1/81) 6.77 0.009111 0.023207
GO:0005575 cellular_component 14.81% (12/81) 1.08 0.010355 0.025887
GO:0006351 transcription, DNA-templated 2.47% (2/81) 3.65 0.011111 0.026787
GO:0097659 nucleic acid-templated transcription 2.47% (2/81) 3.65 0.011111 0.026787
GO:0008168 methyltransferase activity 3.7% (3/81) 2.65 0.01231 0.029156
GO:0140098 catalytic activity, acting on RNA 3.7% (3/81) 2.62 0.01295 0.030142
GO:0071840 cellular component organization or biogenesis 3.7% (3/81) 2.57 0.014286 0.032688
GO:0016741 transferase activity, transferring one-carbon groups 3.7% (3/81) 2.54 0.014982 0.03371
GO:0032040 small-subunit processome 1.23% (1/81) 5.77 0.01814 0.039497
GO:0008134 transcription factor binding 1.23% (1/81) 5.77 0.01814 0.039497
GO:0043167 ion binding 14.81% (12/81) 0.92 0.023075 0.049446
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_104 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_106 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_180 0.055 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_205 0.034 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_241 0.028 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_253 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_254 0.039 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_258 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_7 0.052 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_136 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.144 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_191 0.023 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_199 0.073 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_226 0.024 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_49 0.067 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.071 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_80 0.057 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_145 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_118 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_143 0.04 Archaeplastida Compare
Gingko biloba HCCA Cluster_167 0.066 Archaeplastida Compare
Gingko biloba HCCA Cluster_202 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_267 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_301 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_25 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_53 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_64 0.233 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_132 0.055 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_146 0.038 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_155 0.023 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_159 0.029 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_165 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_10 0.037 Archaeplastida Compare
Oryza sativa HCCA Cluster_134 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_210 0.157 Archaeplastida Compare
Oryza sativa HCCA Cluster_262 0.055 Archaeplastida Compare
Oryza sativa HCCA Cluster_312 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_1 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_113 0.034 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_168 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_203 0.148 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_212 0.032 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_266 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.047 Archaeplastida Compare
Picea abies HCCA Cluster_212 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_237 0.034 Archaeplastida Compare
Picea abies HCCA Cluster_260 0.028 Archaeplastida Compare
Picea abies HCCA Cluster_376 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_411 0.031 Archaeplastida Compare
Picea abies HCCA Cluster_431 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_464 0.043 Archaeplastida Compare
Picea abies HCCA Cluster_477 0.045 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.025 Archaeplastida Compare
Picea abies HCCA Cluster_505 0.035 Archaeplastida Compare
Picea abies HCCA Cluster_506 0.035 Archaeplastida Compare
Picea abies HCCA Cluster_510 0.041 Archaeplastida Compare
Picea abies HCCA Cluster_516 0.035 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_37 0.066 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_73 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_85 0.044 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_145 0.057 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_9 0.049 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_29 0.061 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_76 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.167 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_197 0.038 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_255 0.045 Archaeplastida Compare
Vitis vinifera HCCA Cluster_3 0.125 Archaeplastida Compare
Vitis vinifera HCCA Cluster_88 0.027 Archaeplastida Compare
Vitis vinifera HCCA Cluster_101 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_145 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_194 0.036 Archaeplastida Compare
Zea mays HCCA Cluster_13 0.055 Archaeplastida Compare
Zea mays HCCA Cluster_102 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_127 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_162 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_238 0.108 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.109 Archaeplastida Compare
Zea mays HCCA Cluster_355 0.033 Archaeplastida Compare
Sequences (81) (download table)

InterPro Domains

GO Terms

Family Terms