Coexpression cluster: Cluster_6 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 17.19% (33/192) 2.27 0.0 0.0
GO:0016070 RNA metabolic process 7.81% (15/192) 2.72 0.0 1e-06
GO:0006397 mRNA processing 3.12% (6/192) 5.03 0.0 2e-06
GO:0005488 binding 31.25% (60/192) 1.0 0.0 3e-06
GO:0006396 RNA processing 5.21% (10/192) 3.24 0.0 6e-06
GO:0016071 mRNA metabolic process 3.12% (6/192) 4.59 0.0 6e-06
GO:0090304 nucleic acid metabolic process 8.33% (16/192) 2.22 0.0 1.6e-05
GO:0003723 RNA binding 5.73% (11/192) 2.79 1e-06 2.2e-05
GO:0031124 mRNA 3'-end processing 1.56% (3/192) 6.53 1e-06 4.1e-05
GO:0097159 organic cyclic compound binding 20.31% (39/192) 1.12 3e-06 7e-05
GO:1901363 heterocyclic compound binding 20.31% (39/192) 1.12 3e-06 7e-05
GO:0031123 RNA 3'-end processing 1.56% (3/192) 6.11 5e-06 0.000121
GO:0006139 nucleobase-containing compound metabolic process 8.85% (17/192) 1.62 4.3e-05 0.00098
GO:1901360 organic cyclic compound metabolic process 9.38% (18/192) 1.53 5.4e-05 0.001132
GO:0046483 heterocycle metabolic process 8.85% (17/192) 1.49 0.000132 0.002427
GO:0006725 cellular aromatic compound metabolic process 8.85% (17/192) 1.49 0.000127 0.002481
GO:0003674 molecular_function 39.58% (76/192) 0.52 0.000206 0.003559
GO:0003729 mRNA binding 1.04% (2/192) 5.94 0.000347 0.005669
GO:0008173 RNA methyltransferase activity 1.56% (3/192) 3.79 0.001242 0.019219
GO:0034641 cellular nitrogen compound metabolic process 8.85% (17/192) 1.19 0.001339 0.019687
GO:0032774 RNA biosynthetic process 2.08% (4/192) 2.8 0.002574 0.036034
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_6 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_14 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_39 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_71 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_126 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_135 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_163 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_185 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_228 0.021 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_31 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_95 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_105 0.028 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_52 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.03 Gene family Compare
Oryza sativa HCCA cluster Cluster_149 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_196 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_228 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_115 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_31 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_132 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_180 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_197 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_122 0.027 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_211 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_229 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_254 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_285 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_301 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_114 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_148 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_171 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_172 0.026 Gene family Compare
Vitis vinifera HCCA cluster Cluster_197 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_230 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_231 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_43 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_110 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_111 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_294 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_342 0.015 Gene family Compare
Sequences (192) (download table)

InterPro Domains

GO Terms

Family Terms