Coexpression cluster: Cluster_85 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006974 cellular response to DNA damage stimulus 4.05% (10/247) 3.61 0.0 1e-06
GO:0033554 cellular response to stress 4.05% (10/247) 3.61 0.0 1e-06
GO:0051716 cellular response to stimulus 4.05% (10/247) 3.61 0.0 1e-06
GO:0006950 response to stress 4.05% (10/247) 3.3 0.0 6e-06
GO:0050896 response to stimulus 4.05% (10/247) 3.2 0.0 9e-06
GO:0006281 DNA repair 3.24% (8/247) 3.39 1e-06 5.1e-05
GO:0006259 DNA metabolic process 3.64% (9/247) 2.57 2.2e-05 0.001086
GO:0006303 double-strand break repair via nonhomologous end joining 0.81% (2/247) 6.17 0.000193 0.007551
GO:0000726 non-recombinational repair 0.81% (2/247) 6.17 0.000193 0.007551
GO:0006302 double-strand break repair 0.81% (2/247) 5.58 0.000574 0.015538
GO:0000075 cell cycle checkpoint 0.81% (2/247) 5.58 0.000574 0.015538
GO:0000077 DNA damage checkpoint 0.81% (2/247) 5.58 0.000574 0.015538
GO:0031570 DNA integrity checkpoint 0.81% (2/247) 5.58 0.000574 0.015538
GO:0008270 zinc ion binding 2.83% (7/247) 2.19 0.000878 0.022071
GO:0045786 negative regulation of cell cycle 0.81% (2/247) 5.17 0.001137 0.022238
GO:0006891 intra-Golgi vesicle-mediated transport 0.81% (2/247) 5.17 0.001137 0.022238
GO:0048193 Golgi vesicle transport 1.21% (3/247) 3.84 0.001072 0.023579
GO:0043167 ion binding 13.77% (34/247) 0.8 0.001013 0.023783
GO:0005488 binding 23.08% (57/247) 0.56 0.001377 0.025515
GO:0016787 hydrolase activity 8.5% (21/247) 1.03 0.001661 0.029233
GO:0006505 GPI anchor metabolic process 0.81% (2/247) 4.58 0.002791 0.039296
GO:0006506 GPI anchor biosynthetic process 0.81% (2/247) 4.58 0.002791 0.039296
GO:0004003 ATP-dependent DNA helicase activity 0.81% (2/247) 4.58 0.002791 0.039296
GO:0006661 phosphatidylinositol biosynthetic process 0.81% (2/247) 4.58 0.002791 0.039296
GO:0006497 protein lipidation 0.81% (2/247) 4.58 0.002791 0.039296
GO:0140097 catalytic activity, acting on DNA 1.62% (4/247) 2.74 0.002956 0.040014
GO:0017076 purine nucleotide binding 9.31% (23/247) 0.83 0.005687 0.043522
GO:0032555 purine ribonucleotide binding 9.31% (23/247) 0.83 0.005476 0.043806
GO:0030554 adenyl nucleotide binding 8.5% (21/247) 0.87 0.005626 0.044006
GO:0032559 adenyl ribonucleotide binding 8.5% (21/247) 0.88 0.005402 0.04422
GO:0043168 anion binding 10.12% (25/247) 0.79 0.00529 0.044332
GO:0035639 purine ribonucleoside triphosphate binding 9.31% (23/247) 0.84 0.005204 0.044674
GO:0005524 ATP binding 8.5% (21/247) 0.89 0.005115 0.045011
GO:0008026 ATP-dependent helicase activity 0.81% (2/247) 4.36 0.003871 0.045426
GO:0070035 purine NTP-dependent helicase activity 0.81% (2/247) 4.36 0.003871 0.045426
GO:0046474 glycerophospholipid biosynthetic process 0.81% (2/247) 4.36 0.003871 0.045426
GO:0045017 glycerolipid biosynthetic process 0.81% (2/247) 4.36 0.003871 0.045426
GO:0006664 glycolipid metabolic process 0.81% (2/247) 4.17 0.005115 0.046164
GO:1903509 liposaccharide metabolic process 0.81% (2/247) 4.17 0.005115 0.046164
GO:0046467 membrane lipid biosynthetic process 0.81% (2/247) 4.17 0.005115 0.046164
GO:0003684 damaged DNA binding 0.81% (2/247) 4.17 0.005115 0.046164
GO:0009247 glycolipid biosynthetic process 0.81% (2/247) 4.17 0.005115 0.046164
GO:0051726 regulation of cell cycle 0.81% (2/247) 4.17 0.005115 0.046164
GO:0006643 membrane lipid metabolic process 0.81% (2/247) 4.17 0.005115 0.046164
GO:0032553 ribonucleotide binding 9.31% (23/247) 0.81 0.006286 0.047077
GO:0004386 helicase activity 1.21% (3/247) 2.94 0.006754 0.047551
GO:0048523 negative regulation of cellular process 0.81% (2/247) 4.0 0.006516 0.047783
GO:0097367 carbohydrate derivative binding 9.31% (23/247) 0.81 0.006685 0.048026
GO:0016817 hydrolase activity, acting on acid anhydrides 3.64% (9/247) 1.52 0.004505 0.049552
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.64% (9/247) 1.52 0.004377 0.049701
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_127 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_224 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_227 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_49 0.024 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_199 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_151 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_251 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_317 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_96 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_138 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_31 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_128 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_96 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_99 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_37 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_139 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.014 Gene family Compare
Sequences (247) (download table)

InterPro Domains

GO Terms

Family Terms