Coexpression cluster: Cluster_126 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006996 organelle organization 6.67% (4/60) 5.36 3e-06 0.000463
GO:0044424 intracellular part 13.33% (8/60) 2.62 4.3e-05 0.002473
GO:0044464 cell part 13.33% (8/60) 2.51 7.4e-05 0.003191
GO:0051276 chromosome organization 5.0% (3/60) 5.46 4.3e-05 0.003676
GO:0006259 DNA metabolic process 8.33% (5/60) 3.17 0.000236 0.005082
GO:0016043 cellular component organization 6.67% (4/60) 3.89 0.000155 0.005336
GO:0044430 cytoskeletal part 5.0% (3/60) 4.75 0.000192 0.005504
GO:0071840 cellular component organization or biogenesis 6.67% (4/60) 3.74 0.00023 0.005654
GO:0005575 cellular_component 16.67% (10/60) 1.85 0.000388 0.00606
GO:0006265 DNA topological change 3.33% (2/60) 6.1 0.000377 0.006484
GO:0003916 DNA topoisomerase activity 3.33% (2/60) 6.1 0.000377 0.006484
GO:0071103 DNA conformation change 3.33% (2/60) 5.88 0.000518 0.006855
GO:0016459 myosin complex 3.33% (2/60) 5.88 0.000518 0.006855
GO:0005694 chromosome 3.33% (2/60) 5.78 0.000597 0.007333
GO:0043226 organelle 6.67% (4/60) 3.08 0.0013 0.013155
GO:0043229 intracellular organelle 6.67% (4/60) 3.09 0.001252 0.013456
GO:0003774 motor activity 5.0% (3/60) 3.83 0.001249 0.014323
GO:2000104 negative regulation of DNA-dependent DNA replication 1.67% (1/60) 8.69 0.002429 0.018164
GO:0048478 replication fork protection 1.67% (1/60) 8.69 0.002429 0.018164
GO:0051053 negative regulation of DNA metabolic process 1.67% (1/60) 8.69 0.002429 0.018164
GO:0090329 regulation of DNA-dependent DNA replication 1.67% (1/60) 8.69 0.002429 0.018164
GO:0045005 DNA-dependent DNA replication maintenance of fidelity 1.67% (1/60) 8.69 0.002429 0.018164
GO:0008156 negative regulation of DNA replication 1.67% (1/60) 8.69 0.002429 0.018164
GO:0044446 intracellular organelle part 6.67% (4/60) 2.81 0.002566 0.018388
GO:0044422 organelle part 6.67% (4/60) 2.78 0.002726 0.018758
GO:0034453 microtubule anchoring 1.67% (1/60) 7.69 0.004852 0.032099
GO:0090304 nucleic acid metabolic process 8.33% (5/60) 2.16 0.005211 0.033196
GO:0017111 nucleoside-triphosphatase activity 6.67% (4/60) 2.5 0.00555 0.03409
GO:0016817 hydrolase activity, acting on acid anhydrides 6.67% (4/60) 2.44 0.006386 0.035433
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.67% (4/60) 2.45 0.006241 0.035784
GO:0016462 pyrophosphatase activity 6.67% (4/60) 2.45 0.00617 0.036593
GO:0005815 microtubule organizing center 1.67% (1/60) 7.1 0.007269 0.039073
GO:0000226 microtubule cytoskeleton organization 1.67% (1/60) 6.69 0.009681 0.045004
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 1.67% (1/60) 6.69 0.009681 0.045004
GO:0051052 regulation of DNA metabolic process 1.67% (1/60) 6.69 0.009681 0.045004
GO:0006275 regulation of DNA replication 1.67% (1/60) 6.69 0.009681 0.045004
GO:0005634 nucleus 3.33% (2/60) 3.58 0.012262 0.046867
GO:0031327 negative regulation of cellular biosynthetic process 1.67% (1/60) 6.36 0.012087 0.047249
GO:0005680 anaphase-promoting complex 1.67% (1/60) 6.36 0.012087 0.047249
GO:0010558 negative regulation of macromolecule biosynthetic process 1.67% (1/60) 6.36 0.012087 0.047249
GO:0009890 negative regulation of biosynthetic process 1.67% (1/60) 6.36 0.012087 0.047249
GO:0000152 nuclear ubiquitin ligase complex 1.67% (1/60) 6.36 0.012087 0.047249
GO:0007034 vacuolar transport 1.67% (1/60) 6.36 0.012087 0.047249
GO:2000113 negative regulation of cellular macromolecule biosynthetic process 1.67% (1/60) 6.36 0.012087 0.047249
GO:0140097 catalytic activity, acting on DNA 3.33% (2/60) 3.8 0.009083 0.047339
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity 1.67% (1/60) 6.1 0.014487 0.047918
GO:0031461 cullin-RING ubiquitin ligase complex 1.67% (1/60) 6.1 0.014487 0.047918
GO:0061505 DNA topoisomerase II activity 1.67% (1/60) 6.1 0.014487 0.047918
GO:0007010 cytoskeleton organization 1.67% (1/60) 6.1 0.014487 0.047918
GO:0051172 negative regulation of nitrogen compound metabolic process 1.67% (1/60) 6.1 0.014487 0.047918
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_7 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_40 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_153 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_95 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_2 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_452 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_265 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_166 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_176 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_230 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_261 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_264 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_122 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_185 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_188 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_306 0.018 Gene family Compare
Sequences (60) (download table)

InterPro Domains

GO Terms

Family Terms