Coexpression cluster: Cluster_54 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034472 snRNA 3'-end processing 1.39% (1/72) 9.17 0.001732 0.028181
GO:0032299 ribonuclease H2 complex 1.39% (1/72) 9.17 0.001732 0.028181
GO:0051751 alpha-1,4-mannosyltransferase activity 1.39% (1/72) 9.17 0.001732 0.028181
GO:0016073 snRNA metabolic process 1.39% (1/72) 9.17 0.001732 0.028181
GO:0016180 snRNA processing 1.39% (1/72) 9.17 0.001732 0.028181
GO:0034477 U6 snRNA 3'-end processing 1.39% (1/72) 9.17 0.001732 0.028181
GO:0043628 ncRNA 3'-end processing 1.39% (1/72) 9.17 0.001732 0.028181
GO:0010033 response to organic substance 4.17% (3/72) 4.28 0.000508 0.030323
GO:0009719 response to endogenous stimulus 4.17% (3/72) 4.28 0.000508 0.030323
GO:0009725 response to hormone 4.17% (3/72) 4.28 0.000508 0.030323
GO:0042221 response to chemical 4.17% (3/72) 4.1 0.000735 0.032881
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA Cluster_74 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_191 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_351 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_154 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_361 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_85 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_178 0.022 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_210 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_290 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_478 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_489 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_39 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_225 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_72 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_94 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_99 0.026 Archaeplastida Compare
Vitis vinifera HCCA Cluster_238 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_133 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_196 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_249 0.016 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_191 0.024 LandPlants Compare
Gingko biloba HCCA Cluster_96 0.014 LandPlants Compare
Gingko biloba HCCA Cluster_351 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_49 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_154 0.022 LandPlants Compare
Oryza sativa HCCA Cluster_237 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_210 0.021 LandPlants Compare
Physcomitrella patens HCCA Cluster_228 0.016 LandPlants Compare
Picea abies HCCA Cluster_489 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_225 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_99 0.015 LandPlants Compare
Zea mays HCCA Cluster_114 0.015 LandPlants Compare
Zea mays HCCA Cluster_129 0.017 LandPlants Compare
Zea mays HCCA Cluster_133 0.023 LandPlants Compare
Zea mays HCCA Cluster_196 0.024 LandPlants Compare
Zea mays HCCA Cluster_204 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_20 0.012 SeedPlants Compare
Amborella trichopoda HCCA Cluster_248 0.017 SeedPlants Compare
Amborella trichopoda HCCA Cluster_249 0.016 SeedPlants Compare
Amborella trichopoda HCCA Cluster_261 0.012 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_51 0.012 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_74 0.018 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_139 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_191 0.024 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_256 0.013 SeedPlants Compare
Gingko biloba HCCA Cluster_20 0.012 SeedPlants Compare
Gingko biloba HCCA Cluster_96 0.014 SeedPlants Compare
Gingko biloba HCCA Cluster_234 0.013 SeedPlants Compare
Gingko biloba HCCA Cluster_341 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_49 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_237 0.017 SeedPlants Compare
Oryza sativa HCCA Cluster_303 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_361 0.013 SeedPlants Compare
Picea abies HCCA Cluster_53 0.012 SeedPlants Compare
Picea abies HCCA Cluster_253 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_225 0.016 SeedPlants Compare
Vitis vinifera HCCA Cluster_94 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_238 0.013 SeedPlants Compare
Zea mays HCCA Cluster_35 0.014 SeedPlants Compare
Zea mays HCCA Cluster_36 0.012 SeedPlants Compare
Zea mays HCCA Cluster_40 0.013 SeedPlants Compare
Zea mays HCCA Cluster_78 0.012 SeedPlants Compare
Zea mays HCCA Cluster_82 0.013 SeedPlants Compare
Zea mays HCCA Cluster_98 0.013 SeedPlants Compare
Zea mays HCCA Cluster_114 0.015 SeedPlants Compare
Zea mays HCCA Cluster_129 0.017 SeedPlants Compare
Zea mays HCCA Cluster_133 0.023 SeedPlants Compare
Zea mays HCCA Cluster_196 0.024 SeedPlants Compare
Zea mays HCCA Cluster_204 0.017 SeedPlants Compare
Zea mays HCCA Cluster_237 0.016 SeedPlants Compare
Zea mays HCCA Cluster_264 0.014 SeedPlants Compare
Zea mays HCCA Cluster_286 0.014 SeedPlants Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms