Coexpression cluster: Cluster_171 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005794 Golgi apparatus 19.17% (23/120) 2.57 0.0 0.0
GO:0005802 trans-Golgi network 10.0% (12/120) 3.63 0.0 0.0
GO:0044444 cytoplasmic part 64.17% (77/120) 0.84 0.0 0.0
GO:0098791 Golgi subcompartment 10.0% (12/120) 3.52 0.0 0.0
GO:0005768 endosome 10.0% (12/120) 3.44 0.0 0.0
GO:0004576 oligosaccharyl transferase activity 3.33% (4/120) 7.51 0.0 0.0
GO:0044431 Golgi apparatus part 10.0% (12/120) 3.34 0.0 0.0
GO:0031410 cytoplasmic vesicle 10.0% (12/120) 3.35 0.0 0.0
GO:0097708 intracellular vesicle 10.0% (12/120) 3.35 0.0 0.0
GO:0031982 vesicle 10.0% (12/120) 3.29 0.0 0.0
GO:0031984 organelle subcompartment 10.0% (12/120) 2.59 1e-06 7.5e-05
GO:0016757 transferase activity, transferring glycosyl groups 10.83% (13/120) 2.46 1e-06 7.5e-05
GO:0005829 cytosol 17.5% (21/120) 1.68 2e-06 0.000165
GO:0006139 nucleobase-containing compound metabolic process 24.17% (29/120) 1.33 2e-06 0.000189
GO:0009086 methionine biosynthetic process 5.0% (6/120) 3.82 4e-06 0.000325
GO:0006555 methionine metabolic process 5.0% (6/120) 3.75 6e-06 0.000408
GO:0005852 eukaryotic translation initiation factor 3 complex 2.5% (3/120) 6.25 7e-06 0.000436
GO:0009067 aspartate family amino acid biosynthetic process 5.0% (6/120) 3.57 1.2e-05 0.000686
GO:0044424 intracellular part 88.33% (106/120) 0.3 1.1e-05 0.00069
GO:0046483 heterocycle metabolic process 25.0% (30/120) 1.18 1.3e-05 0.000715
GO:0005783 endoplasmic reticulum 9.17% (11/120) 2.3 1.6e-05 0.000819
GO:0090304 nucleic acid metabolic process 19.17% (23/120) 1.39 1.7e-05 0.000857
GO:0006807 nitrogen compound metabolic process 35.83% (43/120) 0.87 2.2e-05 0.001033
GO:0016021 integral component of membrane 5.83% (7/120) 3.06 2.3e-05 0.001039
GO:0003743 translation initiation factor activity 4.17% (5/120) 3.87 2.4e-05 0.001065
GO:0016020 membrane 32.5% (39/120) 0.92 3.1e-05 0.001211
GO:0008380 RNA splicing 6.67% (8/120) 2.74 2.9e-05 0.001221
GO:0016758 transferase activity, transferring hexosyl groups 6.67% (8/120) 2.7 3.4e-05 0.001234
GO:1901360 organic cyclic compound metabolic process 26.67% (32/120) 1.07 3e-05 0.001235
GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation 5.0% (6/120) 3.28 3.8e-05 0.001254
GO:0009066 aspartate family amino acid metabolic process 5.0% (6/120) 3.31 3.4e-05 0.001265
GO:0034641 cellular nitrogen compound metabolic process 25.0% (30/120) 1.09 4e-05 0.001283
GO:0006464 cellular protein modification process 16.67% (20/120) 1.45 3.8e-05 0.00129
GO:0036211 protein modification process 16.67% (20/120) 1.45 3.8e-05 0.00129
GO:0044464 cell part 92.5% (111/120) 0.23 4.2e-05 0.001328
GO:0044238 primary metabolic process 40.0% (48/120) 0.76 5.1e-05 0.001548
GO:1901564 organonitrogen compound metabolic process 29.17% (35/120) 0.94 7e-05 0.002059
GO:0043170 macromolecule metabolic process 31.67% (38/120) 0.88 7.4e-05 0.002141
GO:0006725 cellular aromatic compound metabolic process 25.0% (30/120) 1.04 8e-05 0.002255
GO:0006520 cellular amino acid metabolic process 9.17% (11/120) 1.91 0.000176 0.004813
GO:0009505 plant-type cell wall 5.83% (7/120) 2.57 0.000189 0.005047
GO:0007020 microtubule nucleation 3.33% (4/120) 3.79 0.000205 0.005101
GO:0008135 translation factor activity, RNA binding 4.17% (5/120) 3.23 0.000205 0.005214
GO:0007010 cytoskeleton organization 6.67% (8/120) 2.33 0.000204 0.005331
GO:0044267 cellular protein metabolic process 17.5% (21/120) 1.21 0.000241 0.005854
GO:1901607 alpha-amino acid biosynthetic process 6.67% (8/120) 2.27 0.000269 0.006393
GO:0043231 intracellular membrane-bounded organelle 76.67% (92/120) 0.32 0.000292 0.006811
GO:0043227 membrane-bounded organelle 76.67% (92/120) 0.32 0.000316 0.00722
GO:0010228 vegetative to reproductive phase transition of meristem 5.83% (7/120) 2.42 0.000351 0.007854
GO:0044237 cellular metabolic process 40.0% (48/120) 0.63 0.000462 0.009913
GO:0003723 RNA binding 7.5% (9/120) 2.0 0.000454 0.009936
GO:0043226 organelle 76.67% (92/120) 0.3 0.000539 0.010939
GO:0043412 macromolecule modification 16.67% (20/120) 1.16 0.000554 0.011038
GO:1901605 alpha-amino acid metabolic process 7.5% (9/120) 1.96 0.000535 0.011058
GO:0043229 intracellular organelle 76.67% (92/120) 0.3 0.00053 0.011168
GO:0071704 organic substance metabolic process 40.83% (49/120) 0.61 0.000602 0.011781
GO:0006396 RNA processing 9.17% (11/120) 1.69 0.000643 0.012348
GO:0044422 organelle part 21.67% (26/120) 0.93 0.000861 0.014505
GO:0019538 protein metabolic process 20.0% (24/120) 0.98 0.000858 0.014679
GO:0000105 histidine biosynthetic process 1.67% (2/120) 5.51 0.000838 0.014793
GO:0006547 histidine metabolic process 1.67% (2/120) 5.51 0.000838 0.014793
GO:0052803 imidazole-containing compound metabolic process 1.67% (2/120) 5.51 0.000838 0.014793
GO:0008652 cellular amino acid biosynthetic process 6.67% (8/120) 2.02 0.000858 0.014905
GO:0044446 intracellular organelle part 21.67% (26/120) 0.93 0.000833 0.015454
GO:0044260 cellular macromolecule metabolic process 24.17% (29/120) 0.87 0.000819 0.015469
GO:0004812 aminoacyl-tRNA ligase activity 2.5% (3/120) 3.86 0.001156 0.018351
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.5% (3/120) 3.86 0.001156 0.018351
GO:0008152 metabolic process 42.5% (51/120) 0.55 0.00115 0.018802
GO:0016740 transferase activity 20.0% (24/120) 0.95 0.001134 0.018811
GO:0006996 organelle organization 11.67% (14/120) 1.32 0.001479 0.023141
GO:0022414 reproductive process 16.67% (20/120) 1.03 0.001644 0.024997
GO:0050793 regulation of developmental process 9.17% (11/120) 1.52 0.001623 0.025023
GO:0018193 peptidyl-amino acid modification 5.83% (7/120) 2.0 0.001951 0.029262
GO:0000097 sulfur amino acid biosynthetic process 5.0% (6/120) 2.2 0.002013 0.029787
GO:0016043 cellular component organization 19.17% (23/120) 0.92 0.002077 0.02992
GO:0044425 membrane part 9.17% (11/120) 1.48 0.002058 0.03005
GO:0009987 cellular process 48.33% (58/120) 0.45 0.00225 0.031998
GO:0016070 RNA metabolic process 11.67% (14/120) 1.2 0.003025 0.042463
GO:0000096 sulfur amino acid metabolic process 5.0% (6/120) 2.04 0.003491 0.047789
GO:0008398 sterol 14-demethylase activity 0.83% (1/120) 7.83 0.004382 0.047988
GO:0004819 glutamine-tRNA ligase activity 0.83% (1/120) 7.83 0.004382 0.047988
GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity 0.83% (1/120) 7.83 0.004382 0.047988
GO:0010068 protoderm histogenesis 0.83% (1/120) 7.83 0.004382 0.047988
GO:0010314 phosphatidylinositol-5-phosphate binding 0.83% (1/120) 7.83 0.004382 0.047988
GO:0070971 endoplasmic reticulum exit site 0.83% (1/120) 7.83 0.004382 0.047988
GO:0036292 DNA rewinding 0.83% (1/120) 7.83 0.004382 0.047988
GO:0000107 imidazoleglycerol-phosphate synthase activity 0.83% (1/120) 7.83 0.004382 0.047988
GO:0004401 histidinol-phosphatase activity 0.83% (1/120) 7.83 0.004382 0.047988
GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity 0.83% (1/120) 7.83 0.004382 0.047988
GO:0018196 peptidyl-asparagine modification 0.83% (1/120) 7.83 0.004382 0.047988
GO:0018279 protein N-linked glycosylation via asparagine 0.83% (1/120) 7.83 0.004382 0.047988
GO:0031224 intrinsic component of membrane 5.83% (7/120) 1.85 0.00348 0.04824
GO:0018377 protein myristoylation 3.33% (4/120) 2.6 0.004451 0.048253
GO:0140101 catalytic activity, acting on a tRNA 2.5% (3/120) 3.17 0.004572 0.048609
GO:0016741 transferase activity, transferring one-carbon groups 3.33% (4/120) 2.59 0.004556 0.048908
GO:0031365 N-terminal protein amino acid modification 3.33% (4/120) 2.58 0.004663 0.049091
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_61 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_200 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_260 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_277 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_18 0.021 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_105 0.031 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_199 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_35 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_38 0.033 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_42 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_50 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.028 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_121 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_124 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_127 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_2 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_8 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_50 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_52 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_96 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_106 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_119 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_123 0.03 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_236 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_242 0.027 Gene family Compare
Oryza sativa HCCA cluster Cluster_251 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_263 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_266 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_274 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_289 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_321 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_325 0.032 Gene family Compare
Picea abies HCCA cluster Cluster_50 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_208 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_214 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_274 0.023 Gene family Compare
Picea abies HCCA cluster Cluster_304 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_334 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_351 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_395 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_462 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_495 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_6 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_32 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_96 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_103 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_140 0.022 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_164 0.023 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_170 0.029 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_172 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_210 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_31 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_45 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_64 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_128 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_137 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_159 0.039 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_162 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_183 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_185 0.029 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_221 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_235 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_244 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_249 0.035 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_270 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_277 0.027 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_285 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_289 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_299 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_302 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_16 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_42 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_72 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_74 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_99 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_103 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_117 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_128 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_158 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_172 0.041 Gene family Compare
Vitis vinifera HCCA cluster Cluster_183 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_243 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_250 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_46 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_110 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_139 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_144 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_164 0.036 Gene family Compare
Zea mays HCCA cluster Cluster_181 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_189 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_191 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_196 0.04 Gene family Compare
Zea mays HCCA cluster Cluster_211 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_260 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_294 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_301 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_304 0.038 Gene family Compare
Zea mays HCCA cluster Cluster_326 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_336 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_349 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_352 0.025 Gene family Compare
Sequences (120) (download table)

InterPro Domains

GO Terms

Family Terms