Coexpression cluster: Cluster_288 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019430 removal of superoxide radicals 100.0% (3/3) 11.57 0.0 0.0
GO:1990748 cellular detoxification 100.0% (3/3) 11.57 0.0 0.0
GO:0098869 cellular oxidant detoxification 100.0% (3/3) 11.57 0.0 0.0
GO:0006801 superoxide metabolic process 100.0% (3/3) 11.42 0.0 0.0
GO:0071457 cellular response to ozone 66.67% (2/3) 12.57 0.0 1e-06
GO:0035195 gene silencing by miRNA 66.67% (2/3) 12.16 0.0 2e-06
GO:0071324 cellular response to disaccharide stimulus 66.67% (2/3) 11.83 0.0 2e-06
GO:0071329 cellular response to sucrose stimulus 66.67% (2/3) 11.83 0.0 2e-06
GO:0071493 cellular response to UV-B 66.67% (2/3) 11.83 0.0 2e-06
GO:0071236 cellular response to antibiotic 66.67% (2/3) 10.99 0.0 5e-06
GO:0071484 cellular response to light intensity 66.67% (2/3) 10.99 0.0 5e-06
GO:0071322 cellular response to carbohydrate stimulus 66.67% (2/3) 10.99 0.0 5e-06
GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor 66.67% (2/3) 11.16 0.0 6e-06
GO:0004784 superoxide dismutase activity 66.67% (2/3) 11.16 0.0 6e-06
GO:0072593 reactive oxygen species metabolic process 100.0% (3/3) 7.3 0.0 6e-06
GO:0034644 cellular response to UV 66.67% (2/3) 10.83 0.0 6e-06
GO:0005507 copper ion binding 100.0% (3/3) 7.09 0.0 6e-06
GO:0098754 detoxification 100.0% (3/3) 6.93 1e-06 8e-06
GO:0046688 response to copper ion 66.67% (2/3) 10.35 1e-06 1e-05
GO:0071472 cellular response to salt stress 66.67% (2/3) 9.76 2e-06 2.3e-05
GO:0071470 cellular response to osmotic stress 66.67% (2/3) 9.4 3e-06 3.7e-05
GO:0034614 cellular response to reactive oxygen species 66.67% (2/3) 9.35 3e-06 3.8e-05
GO:0035690 cellular response to drug 66.67% (2/3) 9.16 4e-06 4.7e-05
GO:0010193 response to ozone 66.67% (2/3) 8.99 5e-06 5.8e-05
GO:0034599 cellular response to oxidative stress 66.67% (2/3) 8.95 5e-06 5.8e-05
GO:0008270 zinc ion binding 100.0% (3/3) 5.54 1e-05 0.000104
GO:0010039 response to iron ion 66.67% (2/3) 8.4 1.1e-05 0.000116
GO:0071478 cellular response to radiation 66.67% (2/3) 7.95 2.2e-05 0.000197
GO:0071482 cellular response to light stimulus 66.67% (2/3) 7.95 2.2e-05 0.000197
GO:0071310 cellular response to organic substance 66.67% (2/3) 7.97 2.1e-05 0.000205
GO:0046914 transition metal ion binding 100.0% (3/3) 5.1 2.5e-05 0.000211
GO:0035194 posttranscriptional gene silencing by RNA 66.67% (2/3) 7.85 2.5e-05 0.000218
GO:0016441 posttranscriptional gene silencing 66.67% (2/3) 7.7 3.1e-05 0.000254
GO:0071229 cellular response to acid chemical 66.67% (2/3) 7.53 3.9e-05 0.000312
GO:0010224 response to UV-B 66.67% (2/3) 7.46 4.3e-05 0.000335
GO:0046872 metal ion binding 100.0% (3/3) 4.76 5.1e-05 0.000385
GO:0043169 cation binding 100.0% (3/3) 4.74 5.2e-05 0.000386
GO:0016209 antioxidant activity 66.67% (2/3) 7.19 6.2e-05 0.000446
GO:1901701 cellular response to oxygen-containing compound 66.67% (2/3) 7.14 6.6e-05 0.000463
GO:0071214 cellular response to abiotic stimulus 66.67% (2/3) 6.84 0.0001 0.000669
GO:0104004 cellular response to environmental stimulus 66.67% (2/3) 6.84 0.0001 0.000669
GO:0010608 posttranscriptional regulation of gene expression 66.67% (2/3) 6.83 0.000103 0.00067
GO:0016532 superoxide dismutase copper chaperone activity 33.33% (1/3) 13.16 0.00011 0.000698
GO:0070887 cellular response to chemical stimulus 66.67% (2/3) 6.5 0.000162 0.001007
GO:0034285 response to disaccharide 66.67% (2/3) 6.44 0.000175 0.001041
GO:0009744 response to sucrose 66.67% (2/3) 6.46 0.000171 0.001044
GO:0031047 gene silencing by RNA 66.67% (2/3) 6.34 0.000202 0.00118
GO:0015680 intracellular copper ion transport 33.33% (1/3) 12.16 0.000219 0.001225
GO:0071280 cellular response to copper ion 33.33% (1/3) 12.16 0.000219 0.001225
GO:0009411 response to UV 66.67% (2/3) 6.21 0.00024 0.001314
GO:0043167 ion binding 100.0% (3/3) 3.98 0.000254 0.001367
GO:0040029 regulation of gene expression, epigenetic 66.67% (2/3) 6.04 0.000306 0.001613
GO:0009642 response to light intensity 66.67% (2/3) 6.01 0.000317 0.00164
GO:0009743 response to carbohydrate 66.67% (2/3) 5.94 0.000352 0.001784
GO:0016458 gene silencing 66.67% (2/3) 5.91 0.000366 0.001823
GO:0000302 response to reactive oxygen species 66.67% (2/3) 5.88 0.000378 0.001849
GO:0016531 copper chaperone activity 33.33% (1/3) 11.16 0.000438 0.002106
GO:0046677 response to antibiotic 66.67% (2/3) 5.67 0.000507 0.002395
GO:0016530 metallochaperone activity 33.33% (1/3) 10.83 0.000548 0.002544
GO:0006878 cellular copper ion homeostasis 33.33% (1/3) 10.57 0.000657 0.003001
GO:0006979 response to oxidative stress 66.67% (2/3) 5.26 0.000891 0.004
GO:0055070 copper ion homeostasis 33.33% (1/3) 9.99 0.000986 0.004356
GO:0010629 negative regulation of gene expression 66.67% (2/3) 5.04 0.001209 0.00526
GO:0009570 chloroplast stroma 66.67% (2/3) 4.95 0.001366 0.005671
GO:0010038 response to metal ion 66.67% (2/3) 4.95 0.001366 0.005671
GO:0009532 plastid stroma 66.67% (2/3) 4.95 0.001366 0.005671
GO:0010605 negative regulation of macromolecule metabolic process 66.67% (2/3) 4.86 0.001547 0.006325
GO:0009892 negative regulation of metabolic process 66.67% (2/3) 4.8 0.001692 0.006817
GO:0140104 molecular carrier activity 33.33% (1/3) 8.99 0.001971 0.007826
GO:0006825 copper ion transport 33.33% (1/3) 8.83 0.00219 0.008571
GO:0042493 response to drug 66.67% (2/3) 4.55 0.002391 0.0091
GO:0009651 response to salt stress 66.67% (2/3) 4.55 0.002391 0.0091
GO:0006970 response to osmotic stress 66.67% (2/3) 4.45 0.00273 0.010247
GO:0008047 enzyme activator activity 33.33% (1/3) 8.35 0.003065 0.011348
GO:0016491 oxidoreductase activity 66.67% (2/3) 4.17 0.004017 0.014674
GO:0046916 cellular transition metal ion homeostasis 33.33% (1/3) 7.91 0.004158 0.014795
GO:0071248 cellular response to metal ion 33.33% (1/3) 7.91 0.004158 0.014795
GO:0071241 cellular response to inorganic substance 33.33% (1/3) 7.73 0.004704 0.016315
GO:0033554 cellular response to stress 66.67% (2/3) 4.06 0.004649 0.016331
GO:0009416 response to light stimulus 66.67% (2/3) 3.97 0.005272 0.017835
GO:0001101 response to acid chemical 66.67% (2/3) 3.98 0.005219 0.017875
GO:0048519 negative regulation of biological process 66.67% (2/3) 3.94 0.00547 0.01828
GO:0051716 cellular response to stimulus 66.67% (2/3) 3.91 0.005728 0.018683
GO:0044434 chloroplast part 66.67% (2/3) 3.91 0.005691 0.018786
GO:0044435 plastid part 66.67% (2/3) 3.87 0.00601 0.019147
GO:0009314 response to radiation 66.67% (2/3) 3.88 0.005962 0.019219
GO:0010035 response to inorganic substance 66.67% (2/3) 3.75 0.007089 0.022326
GO:0055076 transition metal ion homeostasis 33.33% (1/3) 7.09 0.007323 0.022801
GO:0065007 biological regulation 100.0% (3/3) 2.33 0.007786 0.023971
GO:0044248 cellular catabolic process 66.67% (2/3) 3.65 0.008188 0.024927
GO:0006875 cellular metal ion homeostasis 33.33% (1/3) 6.87 0.008522 0.025659
GO:0005488 binding 100.0% (3/3) 2.22 0.009979 0.029721
GO:0009056 catabolic process 66.67% (2/3) 3.43 0.011028 0.032492
GO:0055065 metal ion homeostasis 33.33% (1/3) 6.29 0.012764 0.037207
GO:0098771 inorganic ion homeostasis 33.33% (1/3) 6.05 0.015044 0.042938
GO:1901700 response to oxygen-containing compound 66.67% (2/3) 3.21 0.014909 0.043001
GO:0098772 molecular function regulator 33.33% (1/3) 5.33 0.024666 0.045665
GO:0000041 transition metal ion transport 33.33% (1/3) 5.32 0.024881 0.045755
GO:0009404 toxin metabolic process 33.33% (1/3) 5.36 0.024235 0.045795
GO:0008152 metabolic process 100.0% (3/3) 1.78 0.024578 0.045813
GO:0009161 ribonucleoside monophosphate metabolic process 33.33% (1/3) 5.36 0.024127 0.045908
GO:0009123 nucleoside monophosphate metabolic process 33.33% (1/3) 5.36 0.024127 0.045908
GO:0009124 nucleoside monophosphate biosynthetic process 33.33% (1/3) 5.38 0.023803 0.04593
GO:0009126 purine nucleoside monophosphate metabolic process 33.33% (1/3) 5.38 0.023803 0.04593
GO:0009167 purine ribonucleoside monophosphate metabolic process 33.33% (1/3) 5.38 0.023803 0.04593
GO:0009156 ribonucleoside monophosphate biosynthetic process 33.33% (1/3) 5.38 0.023803 0.04593
GO:0046434 organophosphate catabolic process 33.33% (1/3) 5.34 0.024558 0.046088
GO:0050801 ion homeostasis 33.33% (1/3) 5.29 0.02542 0.046433
GO:0009142 nucleoside triphosphate biosynthetic process 33.33% (1/3) 5.43 0.023048 0.04678
GO:0009141 nucleoside triphosphate metabolic process 33.33% (1/3) 5.43 0.023048 0.04678
GO:0009127 purine nucleoside monophosphate biosynthetic process 33.33% (1/3) 5.39 0.023588 0.046834
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 33.33% (1/3) 5.39 0.023588 0.046834
GO:0072525 pyridine-containing compound biosynthetic process 33.33% (1/3) 5.41 0.023264 0.04687
GO:0009152 purine ribonucleotide biosynthetic process 33.33% (1/3) 5.26 0.02585 0.046907
GO:0009407 toxin catabolic process 33.33% (1/3) 5.43 0.02294 0.047261
GO:0009144 purine nucleoside triphosphate metabolic process 33.33% (1/3) 5.43 0.02294 0.047261
GO:0009145 purine nucleoside triphosphate biosynthetic process 33.33% (1/3) 5.43 0.02294 0.047261
GO:0055080 cation homeostasis 33.33% (1/3) 5.44 0.022833 0.048124
GO:0009201 ribonucleoside triphosphate biosynthetic process 33.33% (1/3) 5.45 0.022725 0.048268
GO:0009199 ribonucleoside triphosphate metabolic process 33.33% (1/3) 5.45 0.022725 0.048268
GO:0009205 purine ribonucleoside triphosphate metabolic process 33.33% (1/3) 5.45 0.022725 0.048268
GO:0046034 ATP metabolic process 33.33% (1/3) 5.45 0.022725 0.048268
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 33.33% (1/3) 5.45 0.022725 0.048268
GO:0006754 ATP biosynthetic process 33.33% (1/3) 5.45 0.022725 0.048268
GO:0044237 cellular metabolic process 100.0% (3/3) 1.95 0.017208 0.048608
GO:0010033 response to organic substance 66.67% (2/3) 3.06 0.018193 0.049354
GO:0060255 regulation of macromolecule metabolic process 66.67% (2/3) 2.93 0.021676 0.049492
GO:0019359 nicotinamide nucleotide biosynthetic process 33.33% (1/3) 5.5 0.021861 0.049504
GO:0010468 regulation of gene expression 66.67% (2/3) 3.05 0.018468 0.049609
GO:0019363 pyridine nucleotide biosynthetic process 33.33% (1/3) 5.48 0.022293 0.049661
GO:0034404 nucleobase-containing small molecule biosynthetic process 33.33% (1/3) 5.48 0.022293 0.049661
GO:0009135 purine nucleoside diphosphate metabolic process 33.33% (1/3) 5.53 0.021429 0.04976
GO:0009166 nucleotide catabolic process 33.33% (1/3) 5.53 0.021429 0.04976
GO:1901292 nucleoside phosphate catabolic process 33.33% (1/3) 5.53 0.021429 0.04976
GO:0046031 ADP metabolic process 33.33% (1/3) 5.53 0.021429 0.04976
GO:0009179 purine ribonucleoside diphosphate metabolic process 33.33% (1/3) 5.53 0.021429 0.04976
GO:0009185 ribonucleoside diphosphate metabolic process 33.33% (1/3) 5.53 0.021429 0.04976
GO:0019319 hexose biosynthetic process 33.33% (1/3) 5.77 0.018186 0.04983
GO:0009132 nucleoside diphosphate metabolic process 33.33% (1/3) 5.52 0.021645 0.049839
GO:0006094 gluconeogenesis 33.33% (1/3) 5.8 0.017861 0.049939
GO:0019222 regulation of metabolic process 66.67% (2/3) 2.74 0.027909 0.049981
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

Family Terms