Coexpression cluster: Cluster_95 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016070 RNA metabolic process 7.14% (11/154) 2.91 0.0 4.2e-05
GO:0032774 RNA biosynthetic process 4.55% (7/154) 4.07 0.0 6.3e-05
GO:0034062 5'-3' RNA polymerase activity 2.6% (4/154) 4.42 3.5e-05 0.001564
GO:0097747 RNA polymerase activity 2.6% (4/154) 4.42 3.5e-05 0.001564
GO:0090304 nucleic acid metabolic process 7.79% (12/154) 2.06 3.4e-05 0.002118
GO:0005667 transcription factor complex 1.95% (3/154) 5.59 2.8e-05 0.002154
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.6% (4/154) 4.57 2.3e-05 0.002371
GO:0097659 nucleic acid-templated transcription 2.6% (4/154) 4.04 0.000101 0.003145
GO:0006351 transcription, DNA-templated 2.6% (4/154) 4.04 0.000101 0.003145
GO:0034654 nucleobase-containing compound biosynthetic process 5.19% (8/154) 2.44 0.000121 0.003159
GO:0043170 macromolecule metabolic process 12.34% (19/154) 1.38 0.000136 0.003268
GO:0016779 nucleotidyltransferase activity 3.25% (5/154) 3.38 0.000121 0.003445
GO:0044237 cellular metabolic process 14.29% (22/154) 1.28 0.0001 0.003917
GO:0006352 DNA-templated transcription, initiation 1.95% (3/154) 4.74 0.000181 0.004034
GO:0006139 nucleobase-containing compound metabolic process 8.44% (13/154) 1.66 0.00027 0.005267
GO:0009059 macromolecule biosynthetic process 4.55% (7/154) 2.5 0.000259 0.005393
GO:0006367 transcription initiation from RNA polymerase II promoter 1.3% (2/154) 6.0 0.000381 0.006263
GO:0018130 heterocycle biosynthetic process 5.19% (8/154) 2.21 0.000368 0.006386
GO:0019438 aromatic compound biosynthetic process 5.19% (8/154) 2.21 0.00036 0.006601
GO:0006725 cellular aromatic compound metabolic process 8.44% (13/154) 1.55 0.000524 0.00743
GO:1901362 organic cyclic compound biosynthetic process 5.19% (8/154) 2.15 0.000476 0.007432
GO:0046483 heterocycle metabolic process 8.44% (13/154) 1.56 0.000504 0.007482
GO:1901360 organic cyclic compound metabolic process 8.44% (13/154) 1.53 0.000597 0.007757
GO:0009987 cellular process 16.23% (25/154) 1.01 0.00058 0.007861
GO:0003674 molecular_function 32.47% (50/154) 0.62 0.000659 0.00822
GO:0044798 nuclear transcription factor complex 1.3% (2/154) 5.52 0.000794 0.00918
GO:0090575 RNA polymerase II transcription factor complex 1.3% (2/154) 5.52 0.000794 0.00918
GO:0006807 nitrogen compound metabolic process 12.99% (20/154) 1.12 0.000881 0.009814
GO:0016740 transferase activity 8.44% (13/154) 1.37 0.001638 0.01704
GO:0034641 cellular nitrogen compound metabolic process 8.44% (13/154) 1.38 0.001603 0.017245
GO:0044271 cellular nitrogen compound biosynthetic process 5.19% (8/154) 1.82 0.002049 0.020627
GO:0044238 primary metabolic process 12.99% (20/154) 1.0 0.00237 0.023103
GO:0008150 biological_process 21.43% (33/154) 0.72 0.002446 0.023123
GO:0003676 nucleic acid binding 7.14% (11/154) 1.42 0.002957 0.027134
GO:0071704 organic substance metabolic process 12.99% (20/154) 0.94 0.003797 0.033851
GO:0008152 metabolic process 14.94% (23/154) 0.83 0.004923 0.040418
GO:0044260 cellular macromolecule metabolic process 7.79% (12/154) 1.25 0.004764 0.041288
GO:0005488 binding 20.78% (32/154) 0.67 0.004907 0.041376
GO:0044428 nuclear part 1.95% (3/154) 3.0 0.006271 0.046583
GO:0000726 non-recombinational repair 0.65% (1/154) 7.33 0.006234 0.047442
GO:0005200 structural constituent of cytoskeleton 0.65% (1/154) 7.33 0.006234 0.047442
GO:0006303 double-strand break repair via nonhomologous end joining 0.65% (1/154) 7.33 0.006234 0.047442
GO:0016579 protein deubiquitination 1.3% (2/154) 4.0 0.006816 0.04833
GO:0070646 protein modification by small protein removal 1.3% (2/154) 4.0 0.006816 0.04833
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_5 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_84 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_90 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_93 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_137 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_167 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_202 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_240 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_176 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_6 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.036 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_89 0.033 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_99 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_160 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_165 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_123 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_248 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_291 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_321 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_339 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_397 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_434 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_20 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_91 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_165 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_197 0.024 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_59 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_229 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_278 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_47 0.021 Gene family Compare
Vitis vinifera HCCA cluster Cluster_112 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_172 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_189 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_216 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_57 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_86 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_168 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_211 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_294 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_306 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_352 0.015 Gene family Compare
Sequences (154) (download table)

InterPro Domains

GO Terms

Family Terms