Coexpression cluster: Cluster_238 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 22.03% (13/59) 2.33 1e-06 0.000194
GO:0043231 intracellular membrane-bounded organelle 8.47% (5/59) 3.57 6.6e-05 0.002545
GO:0043227 membrane-bounded organelle 8.47% (5/59) 3.57 6.6e-05 0.002545
GO:0005634 nucleus 8.47% (5/59) 3.75 3.6e-05 0.00276
GO:0034243 regulation of transcription elongation from RNA polymerase II promoter 1.69% (1/59) 8.46 0.002836 0.033816
GO:0032786 positive regulation of DNA-templated transcription, elongation 1.69% (1/59) 8.46 0.002836 0.033816
GO:0032968 positive regulation of transcription elongation from RNA polymerase II promoter 1.69% (1/59) 8.46 0.002836 0.033816
GO:0032784 regulation of DNA-templated transcription, elongation 1.69% (1/59) 8.46 0.002836 0.033816
GO:0045944 positive regulation of transcription by RNA polymerase II 1.69% (1/59) 8.46 0.002836 0.033816
GO:0008168 methyltransferase activity 5.08% (3/59) 3.32 0.003444 0.038131
GO:0045893 positive regulation of transcription, DNA-templated 1.69% (1/59) 7.46 0.005664 0.038174
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 1.69% (1/59) 7.46 0.005664 0.038174
GO:0051254 positive regulation of RNA metabolic process 1.69% (1/59) 7.46 0.005664 0.038174
GO:1903508 positive regulation of nucleic acid-templated transcription 1.69% (1/59) 7.46 0.005664 0.038174
GO:1902680 positive regulation of RNA biosynthetic process 1.69% (1/59) 7.46 0.005664 0.038174
GO:0016741 transferase activity, transferring one-carbon groups 5.08% (3/59) 3.23 0.004067 0.039404
GO:0090304 nucleic acid metabolic process 6.78% (4/59) 2.64 0.003915 0.040458
GO:0005622 intracellular anatomical structure 8.47% (5/59) 2.46 0.002148 0.041614
GO:0006528 asparagine metabolic process 1.69% (1/59) 7.14 0.007076 0.042182
GO:0006529 asparagine biosynthetic process 1.69% (1/59) 7.14 0.007076 0.042182
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity 1.69% (1/59) 7.14 0.007076 0.042182
GO:0043229 intracellular organelle 8.47% (5/59) 2.5 0.001938 0.042911
GO:0043226 organelle 8.47% (5/59) 2.5 0.001938 0.042911
GO:0097159 organic cyclic compound binding 22.03% (13/59) 1.13 0.005033 0.043344
GO:1901363 heterocyclic compound binding 22.03% (13/59) 1.13 0.005033 0.043344
GO:0031328 positive regulation of cellular biosynthetic process 1.69% (1/59) 6.65 0.009892 0.043808
GO:0051173 positive regulation of nitrogen compound metabolic process 1.69% (1/59) 6.65 0.009892 0.043808
GO:0009891 positive regulation of biosynthetic process 1.69% (1/59) 6.65 0.009892 0.043808
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor 1.69% (1/59) 6.65 0.009892 0.043808
GO:0009893 positive regulation of metabolic process 1.69% (1/59) 6.65 0.009892 0.043808
GO:0031325 positive regulation of cellular metabolic process 1.69% (1/59) 6.65 0.009892 0.043808
GO:0010557 positive regulation of macromolecule biosynthetic process 1.69% (1/59) 6.65 0.009892 0.043808
GO:0010604 positive regulation of macromolecule metabolic process 1.69% (1/59) 6.65 0.009892 0.043808
GO:0006139 nucleobase-containing compound metabolic process 6.78% (4/59) 2.23 0.01051 0.045253
GO:0032774 RNA biosynthetic process 3.39% (2/59) 3.65 0.011134 0.046644
GO:0032040 small-subunit processome 1.69% (1/59) 6.88 0.008485 0.04871
GO:0016070 RNA metabolic process 6.78% (4/59) 3.0 0.001593 0.049385
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_96 0.024 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_159 0.022 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_180 0.043 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_205 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_244 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_247 0.036 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_253 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_34 0.031 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_152 0.053 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_160 0.024 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_172 0.025 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_181 0.033 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_187 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_198 0.03 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_209 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_263 0.029 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_36 0.108 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_142 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_157 0.019 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_49 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_73 0.043 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_80 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_143 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_167 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_185 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_190 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_202 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_267 0.036 Archaeplastida Compare
Gingko biloba HCCA Cluster_290 0.022 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_64 0.062 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_81 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_128 0.028 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_130 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_159 0.026 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_165 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_10 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_52 0.039 Archaeplastida Compare
Oryza sativa HCCA Cluster_146 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_255 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_262 0.045 Archaeplastida Compare
Oryza sativa HCCA Cluster_301 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_376 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_14 0.041 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_168 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_203 0.037 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_212 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_236 0.033 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_263 0.027 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_266 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.023 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_293 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_212 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_282 0.023 Archaeplastida Compare
Picea abies HCCA Cluster_356 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_426 0.024 Archaeplastida Compare
Picea abies HCCA Cluster_507 0.03 Archaeplastida Compare
Picea abies HCCA Cluster_510 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_541 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_3 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_37 0.033 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_145 0.045 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_9 0.073 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_29 0.03 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_33 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.069 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_229 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_248 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_253 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_261 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_277 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_3 0.032 Archaeplastida Compare
Vitis vinifera HCCA Cluster_101 0.037 Archaeplastida Compare
Vitis vinifera HCCA Cluster_107 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_145 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_194 0.034 Archaeplastida Compare
Zea mays HCCA Cluster_137 0.031 Archaeplastida Compare
Zea mays HCCA Cluster_140 0.024 Archaeplastida Compare
Zea mays HCCA Cluster_178 0.038 Archaeplastida Compare
Zea mays HCCA Cluster_318 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_365 0.02 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_96 0.019 LandPlants Compare
Amborella trichopoda HCCA Cluster_106 0.018 LandPlants Compare
Amborella trichopoda HCCA Cluster_159 0.022 LandPlants Compare
Amborella trichopoda HCCA Cluster_180 0.043 LandPlants Compare
Amborella trichopoda HCCA Cluster_205 0.021 LandPlants Compare
Amborella trichopoda HCCA Cluster_240 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_241 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_247 0.036 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_7 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_34 0.023 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_136 0.018 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_152 0.034 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_160 0.024 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_172 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_181 0.027 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_198 0.02 LandPlants Compare
Gingko biloba HCCA Cluster_129 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_167 0.019 LandPlants Compare
Gingko biloba HCCA Cluster_202 0.024 LandPlants Compare
Gingko biloba HCCA Cluster_267 0.027 LandPlants Compare
Gingko biloba HCCA Cluster_290 0.014 LandPlants Compare
Marchantia polymorpha HCCA Cluster_64 0.043 LandPlants Compare
Marchantia polymorpha HCCA Cluster_81 0.019 LandPlants Compare
Marchantia polymorpha HCCA Cluster_128 0.019 LandPlants Compare
Marchantia polymorpha HCCA Cluster_130 0.03 LandPlants Compare
Marchantia polymorpha HCCA Cluster_132 0.018 LandPlants Compare
Marchantia polymorpha HCCA Cluster_159 0.026 LandPlants Compare
Marchantia polymorpha HCCA Cluster_165 0.028 LandPlants Compare
Oryza sativa HCCA Cluster_10 0.035 LandPlants Compare
Oryza sativa HCCA Cluster_52 0.038 LandPlants Compare
Oryza sativa HCCA Cluster_146 0.039 LandPlants Compare
Oryza sativa HCCA Cluster_166 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_175 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_210 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_262 0.045 LandPlants Compare
Oryza sativa HCCA Cluster_301 0.019 LandPlants Compare
Oryza sativa HCCA Cluster_376 0.02 LandPlants Compare
Physcomitrella patens HCCA Cluster_1 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_14 0.032 LandPlants Compare
Physcomitrella patens HCCA Cluster_168 0.027 LandPlants Compare
Physcomitrella patens HCCA Cluster_203 0.022 LandPlants Compare
Physcomitrella patens HCCA Cluster_210 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_212 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_236 0.033 LandPlants Compare
Physcomitrella patens HCCA Cluster_263 0.027 LandPlants Compare
Physcomitrella patens HCCA Cluster_266 0.029 LandPlants Compare
Physcomitrella patens HCCA Cluster_275 0.023 LandPlants Compare
Picea abies HCCA Cluster_212 0.024 LandPlants Compare
Picea abies HCCA Cluster_282 0.022 LandPlants Compare
Picea abies HCCA Cluster_379 0.018 LandPlants Compare
Picea abies HCCA Cluster_426 0.016 LandPlants Compare
Picea abies HCCA Cluster_446 0.018 LandPlants Compare
Picea abies HCCA Cluster_464 0.016 LandPlants Compare
Picea abies HCCA Cluster_483 0.015 LandPlants Compare
Picea abies HCCA Cluster_507 0.02 LandPlants Compare
Picea abies HCCA Cluster_510 0.023 LandPlants Compare
Picea abies HCCA Cluster_512 0.018 LandPlants Compare
Picea abies HCCA Cluster_541 0.019 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_3 0.022 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_37 0.02 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_145 0.039 LandPlants Compare
Solanum lycopersicum HCCA Cluster_9 0.067 LandPlants Compare
Solanum lycopersicum HCCA Cluster_29 0.026 LandPlants Compare
Solanum lycopersicum HCCA Cluster_33 0.019 LandPlants Compare
Solanum lycopersicum HCCA Cluster_119 0.06 LandPlants Compare
Solanum lycopersicum HCCA Cluster_151 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_229 0.022 LandPlants Compare
Solanum lycopersicum HCCA Cluster_248 0.022 LandPlants Compare
Solanum lycopersicum HCCA Cluster_261 0.019 LandPlants Compare
Vitis vinifera HCCA Cluster_3 0.031 LandPlants Compare
Vitis vinifera HCCA Cluster_101 0.033 LandPlants Compare
Vitis vinifera HCCA Cluster_107 0.028 LandPlants Compare
Vitis vinifera HCCA Cluster_145 0.029 LandPlants Compare
Vitis vinifera HCCA Cluster_170 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_190 0.018 LandPlants Compare
Vitis vinifera HCCA Cluster_194 0.02 LandPlants Compare
Zea mays HCCA Cluster_137 0.021 LandPlants Compare
Zea mays HCCA Cluster_178 0.019 LandPlants Compare
Zea mays HCCA Cluster_318 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_96 0.019 SeedPlants Compare
Amborella trichopoda HCCA Cluster_106 0.018 SeedPlants Compare
Amborella trichopoda HCCA Cluster_159 0.021 SeedPlants Compare
Amborella trichopoda HCCA Cluster_180 0.043 SeedPlants Compare
Amborella trichopoda HCCA Cluster_205 0.02 SeedPlants Compare
Amborella trichopoda HCCA Cluster_231 0.012 SeedPlants Compare
Amborella trichopoda HCCA Cluster_240 0.017 SeedPlants Compare
Amborella trichopoda HCCA Cluster_241 0.016 SeedPlants Compare
Amborella trichopoda HCCA Cluster_247 0.035 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_7 0.018 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_34 0.023 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_74 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_136 0.018 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_152 0.034 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_160 0.024 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_181 0.026 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_198 0.02 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_199 0.015 SeedPlants Compare
Gingko biloba HCCA Cluster_119 0.013 SeedPlants Compare
Gingko biloba HCCA Cluster_129 0.016 SeedPlants Compare
Gingko biloba HCCA Cluster_143 0.014 SeedPlants Compare
Gingko biloba HCCA Cluster_167 0.015 SeedPlants Compare
Gingko biloba HCCA Cluster_202 0.024 SeedPlants Compare
Gingko biloba HCCA Cluster_267 0.017 SeedPlants Compare
Gingko biloba HCCA Cluster_290 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_10 0.035 SeedPlants Compare
Oryza sativa HCCA Cluster_52 0.036 SeedPlants Compare
Oryza sativa HCCA Cluster_146 0.038 SeedPlants Compare
Oryza sativa HCCA Cluster_166 0.017 SeedPlants Compare
Oryza sativa HCCA Cluster_172 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_175 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_210 0.018 SeedPlants Compare
Oryza sativa HCCA Cluster_262 0.044 SeedPlants Compare
Oryza sativa HCCA Cluster_301 0.018 SeedPlants Compare
Oryza sativa HCCA Cluster_350 0.012 SeedPlants Compare
Oryza sativa HCCA Cluster_376 0.019 SeedPlants Compare
Picea abies HCCA Cluster_206 0.013 SeedPlants Compare
Picea abies HCCA Cluster_212 0.023 SeedPlants Compare
Picea abies HCCA Cluster_379 0.018 SeedPlants Compare
Picea abies HCCA Cluster_426 0.016 SeedPlants Compare
Picea abies HCCA Cluster_446 0.018 SeedPlants Compare
Picea abies HCCA Cluster_464 0.016 SeedPlants Compare
Picea abies HCCA Cluster_483 0.015 SeedPlants Compare
Picea abies HCCA Cluster_507 0.02 SeedPlants Compare
Picea abies HCCA Cluster_510 0.015 SeedPlants Compare
Picea abies HCCA Cluster_512 0.018 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_9 0.066 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_29 0.025 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_33 0.019 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_110 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_119 0.059 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_151 0.016 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_197 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_229 0.022 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_248 0.022 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_261 0.019 SeedPlants Compare
Vitis vinifera HCCA Cluster_3 0.031 SeedPlants Compare
Vitis vinifera HCCA Cluster_101 0.025 SeedPlants Compare
Vitis vinifera HCCA Cluster_107 0.028 SeedPlants Compare
Vitis vinifera HCCA Cluster_113 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_125 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_145 0.029 SeedPlants Compare
Vitis vinifera HCCA Cluster_161 0.013 SeedPlants Compare
Vitis vinifera HCCA Cluster_190 0.018 SeedPlants Compare
Vitis vinifera HCCA Cluster_194 0.02 SeedPlants Compare
Vitis vinifera HCCA Cluster_212 0.017 SeedPlants Compare
Zea mays HCCA Cluster_83 0.012 SeedPlants Compare
Zea mays HCCA Cluster_178 0.019 SeedPlants Compare
Zea mays HCCA Cluster_250 0.014 SeedPlants Compare
Zea mays HCCA Cluster_318 0.015 SeedPlants Compare
Zea mays HCCA Cluster_319 0.014 SeedPlants Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms