Coexpression cluster: Cluster_114 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006270 DNA replication initiation 7.84% (4/51) 7.92 0.0 0.0
GO:0006259 DNA metabolic process 15.69% (8/51) 4.08 0.0 1e-06
GO:0003677 DNA binding 15.69% (8/51) 3.85 0.0 3e-06
GO:0090304 nucleic acid metabolic process 15.69% (8/51) 3.07 4e-06 0.000105
GO:0006269 DNA replication, synthesis of RNA primer 3.92% (2/51) 8.92 4e-06 0.000125
GO:0003896 DNA primase activity 3.92% (2/51) 8.33 1.3e-05 0.00025
GO:0006275 regulation of DNA replication 3.92% (2/51) 7.92 2.5e-05 0.000375
GO:0051052 regulation of DNA metabolic process 3.92% (2/51) 7.92 2.5e-05 0.000375
GO:0044260 cellular macromolecule metabolic process 17.65% (9/51) 2.43 3.6e-05 0.00048
GO:0006139 nucleobase-containing compound metabolic process 15.69% (8/51) 2.55 5.9e-05 0.000641
GO:0003676 nucleic acid binding 15.69% (8/51) 2.55 5.8e-05 0.000697
GO:0006725 cellular aromatic compound metabolic process 15.69% (8/51) 2.45 9.6e-05 0.000883
GO:1901360 organic cyclic compound metabolic process 15.69% (8/51) 2.43 0.000105 0.000903
GO:0046483 heterocycle metabolic process 15.69% (8/51) 2.45 9.3e-05 0.000929
GO:0034641 cellular nitrogen compound metabolic process 15.69% (8/51) 2.27 0.000222 0.001779
GO:0016779 nucleotidyltransferase activity 5.88% (3/51) 4.24 0.000545 0.003844
GO:0043170 macromolecule metabolic process 17.65% (9/51) 1.89 0.000605 0.004033
GO:0005488 binding 31.37% (16/51) 1.26 0.000539 0.004041
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 3.92% (2/51) 5.17 0.001419 0.008964
GO:0071630 nuclear protein quality control by the ubiquitin-proteasome system 1.96% (1/51) 8.92 0.002065 0.00991
GO:0006515 protein quality control for misfolded or incompletely synthesized proteins 1.96% (1/51) 8.92 0.002065 0.00991
GO:0034629 cellular protein-containing complex localization 1.96% (1/51) 8.92 0.002065 0.00991
GO:0031144 proteasome localization 1.96% (1/51) 8.92 0.002065 0.00991
GO:0034062 5'-3' RNA polymerase activity 3.92% (2/51) 5.01 0.001752 0.010011
GO:0097747 RNA polymerase activity 3.92% (2/51) 5.01 0.001752 0.010011
GO:0044237 cellular metabolic process 17.65% (9/51) 1.59 0.002648 0.012223
GO:0006807 nitrogen compound metabolic process 17.65% (9/51) 1.56 0.002957 0.013142
GO:0031503 protein-containing complex localization 1.96% (1/51) 7.92 0.004125 0.0165
GO:0010498 proteasomal protein catabolic process 1.96% (1/51) 7.92 0.004125 0.0165
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process 1.96% (1/51) 7.92 0.004125 0.0165
GO:0044238 primary metabolic process 17.65% (9/51) 1.44 0.005121 0.019824
GO:0071704 organic substance metabolic process 17.65% (9/51) 1.38 0.006692 0.025097
GO:0030163 protein catabolic process 1.96% (1/51) 6.92 0.008233 0.029059
GO:0032774 RNA biosynthetic process 3.92% (2/51) 3.85 0.008482 0.02908
GO:0009059 macromolecule biosynthetic process 5.88% (3/51) 2.87 0.008074 0.02936
GO:0003674 molecular_function 35.29% (18/51) 0.74 0.013694 0.045647
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_15 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_51 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_59 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_139 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_187 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_243 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_25 0.058 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_95 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_199 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_224 0.027 Gene family Compare
Oryza sativa HCCA cluster Cluster_234 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_237 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_87 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_288 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_353 0.018 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_41 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_129 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.062 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_261 0.04 Gene family Compare
Vitis vinifera HCCA cluster Cluster_42 0.033 Gene family Compare
Zea mays HCCA cluster Cluster_37 0.033 Gene family Compare
Sequences (51) (download table)

InterPro Domains

GO Terms

Family Terms