Coexpression cluster: Cluster_203 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0090575 RNA polymerase II transcription factor complex 3.39% (2/59) 6.9 0.000117 0.006895
GO:0044798 nuclear transcription factor complex 3.39% (2/59) 6.9 0.000117 0.006895
GO:0005667 transcription factor complex 3.39% (2/59) 6.39 0.000249 0.011031
GO:0090304 nucleic acid metabolic process 11.86% (7/59) 2.67 0.000111 0.019687
GO:1901360 organic cyclic compound metabolic process 11.86% (7/59) 2.03 0.001589 0.031246
GO:0006725 cellular aromatic compound metabolic process 11.86% (7/59) 2.05 0.001467 0.032454
GO:0006139 nucleobase-containing compound metabolic process 11.86% (7/59) 2.15 0.00098 0.034685
GO:0080009 mRNA methylation 1.69% (1/59) 8.71 0.002388 0.03523
GO:0016556 mRNA modification 1.69% (1/59) 8.71 0.002388 0.03523
GO:0046483 heterocycle metabolic process 11.86% (7/59) 2.05 0.001432 0.036202
GO:0016071 mRNA metabolic process 3.39% (2/59) 5.25 0.001256 0.037061
GO:0004484 mRNA guanylyltransferase activity 1.69% (1/59) 7.71 0.004771 0.038387
GO:0008192 RNA guanylyltransferase activity 1.69% (1/59) 7.71 0.004771 0.038387
GO:0006370 7-methylguanosine mRNA capping 1.69% (1/59) 7.71 0.004771 0.038387
GO:0009452 7-methylguanosine RNA capping 1.69% (1/59) 7.71 0.004771 0.038387
GO:0036260 RNA capping 1.69% (1/59) 7.71 0.004771 0.038387
GO:0000439 transcription factor TFIIH core complex 1.69% (1/59) 7.71 0.004771 0.038387
GO:0005672 transcription factor TFIIA complex 1.69% (1/59) 7.71 0.004771 0.038387
GO:0070568 guanylyltransferase activity 1.69% (1/59) 7.71 0.004771 0.038387
GO:0034641 cellular nitrogen compound metabolic process 11.86% (7/59) 1.87 0.002934 0.039953
GO:0008150 biological_process 25.42% (15/59) 0.97 0.007299 0.041673
GO:0016070 RNA metabolic process 6.78% (4/59) 2.84 0.002376 0.042047
GO:0018342 protein prenylation 1.69% (1/59) 7.12 0.007149 0.042177
GO:0008318 protein prenyltransferase activity 1.69% (1/59) 7.12 0.007149 0.042177
GO:0004659 prenyltransferase activity 1.69% (1/59) 7.12 0.007149 0.042177
GO:0097354 prenylation 1.69% (1/59) 7.12 0.007149 0.042177
GO:0000808 origin recognition complex 1.69% (1/59) 7.12 0.007149 0.042177
GO:0005575 cellular_component 13.56% (8/59) 1.55 0.005505 0.042368
GO:0015318 inorganic molecular entity transmembrane transporter activity 5.08% (3/59) 2.88 0.007978 0.044128
GO:0046873 metal ion transmembrane transporter activity 3.39% (2/59) 4.5 0.00354 0.044752
GO:0030001 metal ion transport 3.39% (2/59) 4.09 0.006137 0.045258
GO:0043170 macromolecule metabolic process 13.56% (8/59) 1.51 0.006577 0.046564
GO:0044428 nuclear part 3.39% (2/59) 3.8 0.009083 0.048715
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_139 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_187 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_277 0.03 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_151 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_170 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_103 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_42 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_225 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_298 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_306 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_164 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_120 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_192 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_213 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_230 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_231 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_268 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_300 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_301 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_204 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_29 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_143 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_155 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_178 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_278 0.016 Gene family Compare
Sequences (59) (download table)

InterPro Domains

GO Terms

Family Terms