Coexpression cluster: Cluster_242 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0097747 RNA polymerase activity 7.84% (4/51) 5.26 4e-06 0.000117
GO:0034062 5'-3' RNA polymerase activity 7.84% (4/51) 5.26 4e-06 0.000117
GO:0097659 nucleic acid-templated transcription 7.84% (4/51) 4.86 1.1e-05 0.000211
GO:0006351 transcription, DNA-templated 7.84% (4/51) 4.86 1.1e-05 0.000211
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 7.84% (4/51) 5.4 2e-06 0.000238
GO:0016070 RNA metabolic process 11.76% (6/51) 3.32 2.9e-05 0.000467
GO:0016779 nucleotidyltransferase activity 7.84% (4/51) 4.4 3.9e-05 0.000539
GO:0032774 RNA biosynthetic process 7.84% (4/51) 4.27 5.5e-05 0.000666
GO:0009536 plastid 3.92% (2/51) 6.69 0.000164 0.001429
GO:0009507 chloroplast 3.92% (2/51) 6.69 0.000164 0.001429
GO:0090304 nucleic acid metabolic process 11.76% (6/51) 2.92 0.000135 0.001436
GO:0034654 nucleobase-containing compound biosynthetic process 7.84% (4/51) 3.8 0.000195 0.001557
GO:0140098 catalytic activity, acting on RNA 7.84% (4/51) 3.6 0.00033 0.002438
GO:0009522 photosystem I 3.92% (2/51) 6.11 0.00038 0.002603
GO:0006139 nucleobase-containing compound metabolic process 11.76% (6/51) 2.59 0.000458 0.00275
GO:0018130 heterocycle biosynthetic process 7.84% (4/51) 3.45 0.000493 0.002782
GO:0019438 aromatic compound biosynthetic process 7.84% (4/51) 3.5 0.000436 0.002792
GO:0006725 cellular aromatic compound metabolic process 11.76% (6/51) 2.45 0.00078 0.003746
GO:0046483 heterocycle metabolic process 11.76% (6/51) 2.45 0.00078 0.003746
GO:1901362 organic cyclic compound biosynthetic process 7.84% (4/51) 3.28 0.000771 0.004111
GO:1901360 organic cyclic compound metabolic process 11.76% (6/51) 2.4 0.000933 0.004266
GO:0006397 mRNA processing 3.92% (2/51) 5.21 0.001345 0.005868
GO:0016071 mRNA metabolic process 3.92% (2/51) 4.93 0.001981 0.008268
GO:0015979 photosynthesis 3.92% (2/51) 4.76 0.00247 0.009881
GO:0009521 photosystem 3.92% (2/51) 4.73 0.0026 0.009986
GO:0034641 cellular nitrogen compound metabolic process 11.76% (6/51) 2.0 0.003758 0.013877
GO:0034645 cellular macromolecule biosynthetic process 7.84% (4/51) 2.44 0.0063 0.022401
GO:0044271 cellular nitrogen compound biosynthetic process 7.84% (4/51) 2.38 0.007266 0.024912
GO:0009059 macromolecule biosynthetic process 7.84% (4/51) 2.31 0.008605 0.028486
GO:0009579 thylakoid 1.96% (1/51) 6.69 0.009642 0.030855
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_33 0.07 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_104 0.085 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_177 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_35 0.04 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.032 Archaeplastida Compare
Gingko biloba HCCA Cluster_145 0.044 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_16 0.019 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.042 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_48 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_65 0.041 Archaeplastida Compare
Oryza sativa HCCA Cluster_134 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_151 0.064 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_116 0.021 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_261 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_6 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_51 0.053 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_52 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_66 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_96 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_102 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_193 0.032 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_226 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_10 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_40 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_86 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_157 0.029 Archaeplastida Compare
Vitis vinifera HCCA Cluster_167 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_183 0.024 Archaeplastida Compare
Vitis vinifera HCCA Cluster_290 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_65 0.034 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_33 0.07 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_104 0.084 LandPlants Compare
Gingko biloba HCCA Cluster_35 0.019 LandPlants Compare
Gingko biloba HCCA Cluster_65 0.021 LandPlants Compare
Gingko biloba HCCA Cluster_145 0.044 LandPlants Compare
Marchantia polymorpha HCCA Cluster_36 0.033 LandPlants Compare
Oryza sativa HCCA Cluster_65 0.041 LandPlants Compare
Oryza sativa HCCA Cluster_151 0.063 LandPlants Compare
Solanum lycopersicum HCCA Cluster_51 0.053 LandPlants Compare
Solanum lycopersicum HCCA Cluster_66 0.031 LandPlants Compare
Solanum lycopersicum HCCA Cluster_84 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_96 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_102 0.031 LandPlants Compare
Solanum lycopersicum HCCA Cluster_155 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_193 0.032 LandPlants Compare
Vitis vinifera HCCA Cluster_10 0.02 LandPlants Compare
Vitis vinifera HCCA Cluster_40 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_71 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_73 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_77 0.017 LandPlants Compare
Vitis vinifera HCCA Cluster_128 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_157 0.019 LandPlants Compare
Vitis vinifera HCCA Cluster_183 0.023 LandPlants Compare
Zea mays HCCA Cluster_30 0.016 LandPlants Compare
Zea mays HCCA Cluster_65 0.034 LandPlants Compare
Zea mays HCCA Cluster_135 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_33 0.071 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_104 0.084 SeedPlants Compare
Gingko biloba HCCA Cluster_35 0.019 SeedPlants Compare
Gingko biloba HCCA Cluster_65 0.021 SeedPlants Compare
Gingko biloba HCCA Cluster_145 0.043 SeedPlants Compare
Gingko biloba HCCA Cluster_226 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_65 0.041 SeedPlants Compare
Oryza sativa HCCA Cluster_151 0.064 SeedPlants Compare
Picea abies HCCA Cluster_287 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_51 0.05 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_52 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_66 0.02 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_75 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_96 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_102 0.021 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_155 0.017 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_193 0.032 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_226 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_9 0.013 SeedPlants Compare
Vitis vinifera HCCA Cluster_10 0.02 SeedPlants Compare
Vitis vinifera HCCA Cluster_19 0.013 SeedPlants Compare
Vitis vinifera HCCA Cluster_40 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_71 0.017 SeedPlants Compare
Vitis vinifera HCCA Cluster_73 0.017 SeedPlants Compare
Vitis vinifera HCCA Cluster_77 0.017 SeedPlants Compare
Vitis vinifera HCCA Cluster_82 0.013 SeedPlants Compare
Vitis vinifera HCCA Cluster_128 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_157 0.019 SeedPlants Compare
Vitis vinifera HCCA Cluster_162 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_178 0.012 SeedPlants Compare
Vitis vinifera HCCA Cluster_183 0.024 SeedPlants Compare
Vitis vinifera HCCA Cluster_201 0.012 SeedPlants Compare
Zea mays HCCA Cluster_30 0.016 SeedPlants Compare
Zea mays HCCA Cluster_65 0.034 SeedPlants Compare
Zea mays HCCA Cluster_135 0.016 SeedPlants Compare
Sequences (51) (download table)

InterPro Domains

GO Terms

Family Terms