Coexpression cluster: Cluster_21 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044436 thylakoid part 4.79% (8/167) 5.82 0.0 0.0
GO:0050794 regulation of cellular process 11.98% (20/167) 2.23 0.0 2e-06
GO:0050789 regulation of biological process 11.98% (20/167) 2.19 0.0 2e-06
GO:0065007 biological regulation 11.98% (20/167) 2.16 0.0 2e-06
GO:0008150 biological_process 28.74% (48/167) 1.14 0.0 4e-06
GO:0098796 membrane protein complex 4.79% (8/167) 3.89 0.0 4e-06
GO:0007165 signal transduction 8.38% (14/167) 2.4 1e-06 2.3e-05
GO:0010109 regulation of photosynthesis 1.8% (3/167) 6.79 1e-06 3.5e-05
GO:0042548 regulation of photosynthesis, light reaction 1.8% (3/167) 6.79 1e-06 3.5e-05
GO:0042549 photosystem II stabilization 1.8% (3/167) 6.79 1e-06 3.5e-05
GO:0043467 regulation of generation of precursor metabolites and energy 1.8% (3/167) 6.79 1e-06 3.5e-05
GO:0030089 phycobilisome 1.8% (3/167) 6.21 6e-06 0.000136
GO:0030076 light-harvesting complex 1.8% (3/167) 6.21 6e-06 0.000136
GO:0015979 photosynthesis 2.4% (4/167) 5.04 6e-06 0.000152
GO:0035556 intracellular signal transduction 5.39% (9/167) 2.69 1.2e-05 0.00026
GO:0009987 cellular process 17.96% (30/167) 1.16 2.5e-05 0.000508
GO:0003824 catalytic activity 20.36% (34/167) 1.02 4.9e-05 0.000827
GO:0009654 photosystem II oxygen evolving complex 1.8% (3/167) 5.33 4.8e-05 0.000853
GO:0044425 membrane part 6.59% (11/167) 2.13 4.7e-05 0.000888
GO:0008152 metabolic process 17.96% (30/167) 1.1 5.7e-05 0.000908
GO:0009521 photosystem 1.8% (3/167) 5.21 6.4e-05 0.00097
GO:0009190 cyclic nucleotide biosynthetic process 3.59% (6/167) 3.04 9.4e-05 0.001311
GO:0009187 cyclic nucleotide metabolic process 3.59% (6/167) 3.04 9.4e-05 0.001311
GO:0016849 phosphorus-oxygen lyase activity 3.59% (6/167) 3.01 0.000105 0.00139
GO:0010242 oxygen evolving activity 1.2% (2/167) 6.62 0.000136 0.001603
GO:0005092 GDP-dissociation inhibitor activity 1.2% (2/167) 6.62 0.000136 0.001603
GO:0007264 small GTPase mediated signal transduction 1.2% (2/167) 6.62 0.000136 0.001603
GO:1990204 oxidoreductase complex 1.8% (3/167) 4.79 0.000159 0.001815
GO:1901576 organic substance biosynthetic process 7.19% (12/167) 1.79 0.000199 0.002188
GO:0003674 molecular_function 32.93% (55/167) 0.64 0.000245 0.002603
GO:0010207 photosystem II assembly 1.2% (2/167) 6.21 0.00027 0.00278
GO:0055086 nucleobase-containing small molecule metabolic process 4.19% (7/167) 2.43 0.000341 0.003404
GO:0009058 biosynthetic process 7.19% (12/167) 1.68 0.000399 0.003858
GO:0044249 cellular biosynthetic process 6.59% (11/167) 1.7 0.000622 0.005834
GO:1901293 nucleoside phosphate biosynthetic process 3.59% (6/167) 2.49 0.000735 0.006336
GO:0009165 nucleotide biosynthetic process 3.59% (6/167) 2.49 0.000735 0.006336
GO:0016829 lyase activity 3.59% (6/167) 2.5 0.000711 0.006479
GO:1901362 organic cyclic compound biosynthetic process 4.79% (8/167) 2.03 0.000812 0.006815
GO:0044271 cellular nitrogen compound biosynthetic process 5.39% (9/167) 1.87 0.000847 0.006929
GO:0009117 nucleotide metabolic process 3.59% (6/167) 2.39 0.001042 0.008312
GO:0034654 nucleobase-containing compound biosynthetic process 4.19% (7/167) 2.13 0.001155 0.008771
GO:0006753 nucleoside phosphate metabolic process 3.59% (6/167) 2.37 0.001141 0.008878
GO:0020037 heme binding 1.8% (3/167) 3.75 0.001427 0.010583
GO:0009523 photosystem II 1.2% (2/167) 5.04 0.001585 0.011239
GO:0032991 protein-containing complex 5.39% (9/167) 1.75 0.001576 0.011424
GO:0046906 tetrapyrrole binding 1.8% (3/167) 3.62 0.001839 0.012755
GO:0030695 GTPase regulator activity 1.2% (2/167) 4.89 0.001973 0.012844
GO:0005575 cellular_component 10.18% (17/167) 1.14 0.001905 0.012927
GO:0044281 small molecule metabolic process 4.79% (8/167) 1.83 0.001956 0.012997
GO:0090407 organophosphate biosynthetic process 3.59% (6/167) 2.2 0.002048 0.013069
GO:0016491 oxidoreductase activity 4.79% (8/167) 1.82 0.002106 0.013175
GO:0019438 aromatic compound biosynthetic process 4.19% (7/167) 1.9 0.002856 0.017523
GO:0018130 heterocycle biosynthetic process 4.19% (7/167) 1.9 0.002914 0.017538
GO:0019637 organophosphate metabolic process 3.59% (6/167) 2.03 0.003659 0.021615
GO:0060589 nucleoside-triphosphatase regulator activity 1.2% (2/167) 4.4 0.003919 0.022733
GO:0071704 organic substance metabolic process 12.57% (21/167) 0.89 0.004495 0.025157
GO:0044237 cellular metabolic process 11.38% (19/167) 0.95 0.004449 0.025342
GO:0031323 regulation of cellular metabolic process 2.99% (5/167) 2.2 0.004831 0.026572
GO:0019222 regulation of metabolic process 2.99% (5/167) 2.16 0.005491 0.029689
GO:0044238 primary metabolic process 11.98% (20/167) 0.88 0.005997 0.031882
GO:0009098 leucine biosynthetic process 0.6% (1/167) 7.21 0.006761 0.032189
GO:0009538 photosystem I reaction center 0.6% (1/167) 7.21 0.006761 0.032189
GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor 0.6% (1/167) 7.21 0.006761 0.032189
GO:0006551 leucine metabolic process 0.6% (1/167) 7.21 0.006761 0.032189
GO:0003852 2-isopropylmalate synthase activity 0.6% (1/167) 7.21 0.006761 0.032189
GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity 0.6% (1/167) 7.21 0.006761 0.032189
GO:0006629 lipid metabolic process 2.4% (4/167) 2.44 0.006468 0.033822
GO:0009536 plastid 0.6% (1/167) 6.21 0.013476 0.047239
GO:0046938 phytochelatin biosynthetic process 0.6% (1/167) 6.21 0.013476 0.047239
GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity 0.6% (1/167) 6.21 0.013476 0.047239
GO:0046937 phytochelatin metabolic process 0.6% (1/167) 6.21 0.013476 0.047239
GO:0019748 secondary metabolic process 0.6% (1/167) 6.21 0.013476 0.047239
GO:0044550 secondary metabolite biosynthetic process 0.6% (1/167) 6.21 0.013476 0.047239
GO:0009507 chloroplast 0.6% (1/167) 6.21 0.013476 0.047239
GO:0071900 regulation of protein serine/threonine kinase activity 0.6% (1/167) 6.21 0.013476 0.047239
GO:1904029 regulation of cyclin-dependent protein kinase activity 0.6% (1/167) 6.21 0.013476 0.047239
GO:0019901 protein kinase binding 0.6% (1/167) 6.21 0.013476 0.047239
GO:0009081 branched-chain amino acid metabolic process 0.6% (1/167) 6.21 0.013476 0.047239
GO:0042325 regulation of phosphorylation 0.6% (1/167) 6.21 0.013476 0.047239
GO:0009082 branched-chain amino acid biosynthetic process 0.6% (1/167) 6.21 0.013476 0.047239
GO:0043549 regulation of kinase activity 0.6% (1/167) 6.21 0.013476 0.047239
GO:0045859 regulation of protein kinase activity 0.6% (1/167) 6.21 0.013476 0.047239
GO:0051338 regulation of transferase activity 0.6% (1/167) 6.21 0.013476 0.047239
GO:0001932 regulation of protein phosphorylation 0.6% (1/167) 6.21 0.013476 0.047239
GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity 0.6% (1/167) 6.21 0.013476 0.047239
GO:0019900 kinase binding 0.6% (1/167) 6.21 0.013476 0.047239
GO:1990397 queuosine salvage 0.6% (1/167) 6.21 0.013476 0.047239
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Cyanophora paradoxa HCCA cluster Cluster_4 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_17 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_29 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_76 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_88 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_93 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_111 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_125 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_171 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_179 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_191 0.022 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_212 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_34 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_56 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_61 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_96 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_131 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_223 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_184 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_147 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_111 0.016 Gene family Compare
Sequences (167) (download table)

InterPro Domains

GO Terms

Family Terms