Coexpression cluster: Cluster_193 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034645 cellular macromolecule biosynthetic process 21.9% (23/105) 3.81 0.0 0.0
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 11.43% (12/105) 6.17 0.0 0.0
GO:0009059 macromolecule biosynthetic process 21.9% (23/105) 3.72 0.0 0.0
GO:0034062 5'-3' RNA polymerase activity 11.43% (12/105) 6.02 0.0 0.0
GO:0097747 RNA polymerase activity 11.43% (12/105) 6.02 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 21.9% (23/105) 3.62 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 26.67% (28/105) 3.1 0.0 0.0
GO:0005622 intracellular anatomical structure 20.95% (22/105) 3.3 0.0 0.0
GO:0006351 transcription, DNA-templated 11.43% (12/105) 5.15 0.0 0.0
GO:0097659 nucleic acid-templated transcription 11.43% (12/105) 5.15 0.0 0.0
GO:0044249 cellular biosynthetic process 21.9% (23/105) 3.13 0.0 0.0
GO:0016779 nucleotidyltransferase activity 11.43% (12/105) 5.12 0.0 0.0
GO:1901576 organic substance biosynthetic process 21.9% (23/105) 3.05 0.0 0.0
GO:0016070 RNA metabolic process 16.19% (17/105) 3.77 0.0 0.0
GO:0032774 RNA biosynthetic process 11.43% (12/105) 4.77 0.0 0.0
GO:0043226 organelle 19.05% (20/105) 3.24 0.0 0.0
GO:0043229 intracellular organelle 19.05% (20/105) 3.24 0.0 0.0
GO:0009058 biosynthetic process 21.9% (23/105) 2.91 0.0 0.0
GO:0090304 nucleic acid metabolic process 16.19% (17/105) 3.46 0.0 0.0
GO:0009536 plastid 8.57% (9/105) 5.42 0.0 0.0
GO:0009507 chloroplast 8.57% (9/105) 5.42 0.0 0.0
GO:0044237 cellular metabolic process 34.29% (36/105) 1.91 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 11.43% (12/105) 4.24 0.0 0.0
GO:0034654 nucleobase-containing compound biosynthetic process 11.43% (12/105) 4.17 0.0 0.0
GO:0110165 cellular anatomical entity 29.52% (31/105) 2.04 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 16.19% (17/105) 3.08 0.0 0.0
GO:0019438 aromatic compound biosynthetic process 11.43% (12/105) 3.93 0.0 0.0
GO:0018130 heterocycle biosynthetic process 11.43% (12/105) 3.92 0.0 0.0
GO:0046483 heterocycle metabolic process 16.19% (17/105) 2.96 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 16.19% (17/105) 2.95 0.0 0.0
GO:0005575 cellular_component 30.48% (32/105) 1.84 0.0 0.0
GO:1901362 organic cyclic compound biosynthetic process 11.43% (12/105) 3.76 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 16.19% (17/105) 2.91 0.0 0.0
GO:0008152 metabolic process 34.29% (36/105) 1.53 0.0 0.0
GO:0009987 cellular process 36.19% (38/105) 1.43 0.0 0.0
GO:0043170 macromolecule metabolic process 26.67% (28/105) 1.77 0.0 0.0
GO:0005840 ribosome 10.48% (11/105) 3.41 0.0 0.0
GO:0006412 translation 10.48% (11/105) 3.38 0.0 0.0
GO:0003735 structural constituent of ribosome 10.48% (11/105) 3.36 0.0 0.0
GO:0043043 peptide biosynthetic process 10.48% (11/105) 3.36 0.0 0.0
GO:0043604 amide biosynthetic process 10.48% (11/105) 3.35 0.0 0.0
GO:0006518 peptide metabolic process 10.48% (11/105) 3.33 0.0 0.0
GO:0043603 cellular amide metabolic process 10.48% (11/105) 3.31 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 10.48% (11/105) 3.28 0.0 0.0
GO:0043228 non-membrane-bounded organelle 10.48% (11/105) 3.28 0.0 0.0
GO:0005198 structural molecule activity 10.48% (11/105) 3.25 0.0 0.0
GO:0006807 nitrogen compound metabolic process 26.67% (28/105) 1.66 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 21.9% (23/105) 1.84 0.0 0.0
GO:0006397 mRNA processing 4.76% (5/105) 5.08 0.0 1e-06
GO:1901566 organonitrogen compound biosynthetic process 10.48% (11/105) 2.82 0.0 1e-06
GO:0022900 electron transport chain 4.76% (5/105) 4.96 1e-06 1e-06
GO:0043227 membrane-bounded organelle 8.57% (9/105) 3.19 1e-06 2e-06
GO:0043231 intracellular membrane-bounded organelle 8.57% (9/105) 3.19 1e-06 2e-06
GO:0016071 mRNA metabolic process 4.76% (5/105) 4.86 1e-06 2e-06
GO:0044238 primary metabolic process 26.67% (28/105) 1.38 2e-06 4e-06
GO:0071704 organic substance metabolic process 26.67% (28/105) 1.3 5e-06 1e-05
GO:0006091 generation of precursor metabolites and energy 4.76% (5/105) 3.96 1.8e-05 4e-05
GO:0003677 DNA binding 11.43% (12/105) 2.04 3.6e-05 7.7e-05
GO:0016021 integral component of membrane 9.52% (10/105) 2.18 7.7e-05 0.000163
GO:0008150 biological_process 36.19% (38/105) 0.85 8.9e-05 0.000184
GO:0031224 intrinsic component of membrane 9.52% (10/105) 2.14 9.5e-05 0.000193
GO:0015979 photosynthesis 3.81% (4/105) 3.74 0.000237 0.000473
GO:0006396 RNA processing 4.76% (5/105) 3.11 0.0003 0.00059
GO:0003676 nucleic acid binding 13.33% (14/105) 1.43 0.000681 0.001299
GO:0016772 transferase activity, transferring phosphorus-containing groups 11.43% (12/105) 1.58 0.000681 0.001319
GO:0017004 cytochrome complex assembly 1.9% (2/105) 5.44 0.000962 0.001807
GO:0009521 photosystem 2.86% (3/105) 3.7 0.001634 0.003024
GO:0097159 organic cyclic compound binding 22.86% (24/105) 0.89 0.001827 0.003284
GO:1901363 heterocyclic compound binding 22.86% (24/105) 0.89 0.001827 0.003284
GO:0009522 photosystem I 1.9% (2/105) 4.88 0.002087 0.003697
GO:0009579 thylakoid 1.9% (2/105) 4.02 0.006797 0.011871
GO:0050821 protein stabilization 0.95% (1/105) 6.76 0.009216 0.015443
GO:0042301 phosphate ion binding 0.95% (1/105) 6.76 0.009216 0.015443
GO:0031647 regulation of protein stability 0.95% (1/105) 6.76 0.009216 0.015443
GO:0044267 cellular protein metabolic process 10.48% (11/105) 1.1 0.013502 0.022323
GO:0034622 cellular protein-containing complex assembly 1.9% (2/105) 3.3 0.017747 0.028956
GO:0065003 protein-containing complex assembly 1.9% (2/105) 3.11 0.022553 0.036319
GO:0016740 transferase activity 12.38% (13/105) 0.85 0.02758 0.042749
GO:0098796 membrane protein complex 2.86% (3/105) 2.21 0.027338 0.04291
GO:0043933 protein-containing complex subunit organization 1.9% (2/105) 2.97 0.027222 0.043277
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_33 0.1 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_43 0.043 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_142 0.022 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_44 0.038 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_104 0.202 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_153 0.052 Archaeplastida Compare
Gingko biloba HCCA Cluster_14 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_19 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_35 0.064 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.079 Archaeplastida Compare
Gingko biloba HCCA Cluster_82 0.019 Archaeplastida Compare
Gingko biloba HCCA Cluster_108 0.031 Archaeplastida Compare
Gingko biloba HCCA Cluster_145 0.059 Archaeplastida Compare
Gingko biloba HCCA Cluster_226 0.046 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.055 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_48 0.065 Archaeplastida Compare
Oryza sativa HCCA Cluster_65 0.086 Archaeplastida Compare
Oryza sativa HCCA Cluster_151 0.145 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_116 0.038 Archaeplastida Compare
Picea abies HCCA Cluster_225 0.019 Archaeplastida Compare
Picea abies HCCA Cluster_226 0.037 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_29 0.062 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_1 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_2 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_6 0.041 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_7 0.058 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_16 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_21 0.031 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_51 0.122 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_52 0.036 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_66 0.027 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.049 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_91 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_92 0.041 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_96 0.05 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_130 0.083 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_153 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_169 0.026 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_195 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_226 0.078 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_291 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_316 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_40 0.051 Archaeplastida Compare
Vitis vinifera HCCA Cluster_242 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_10 0.047 Archaeplastida Compare
Zea mays HCCA Cluster_65 0.028 Archaeplastida Compare
Zea mays HCCA Cluster_135 0.027 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_33 0.1 LandPlants Compare
Amborella trichopoda HCCA Cluster_43 0.038 LandPlants Compare
Amborella trichopoda HCCA Cluster_142 0.022 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_44 0.033 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_104 0.2 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_153 0.052 LandPlants Compare
Gingko biloba HCCA Cluster_14 0.019 LandPlants Compare
Gingko biloba HCCA Cluster_19 0.022 LandPlants Compare
Gingko biloba HCCA Cluster_35 0.063 LandPlants Compare
Gingko biloba HCCA Cluster_65 0.078 LandPlants Compare
Gingko biloba HCCA Cluster_82 0.018 LandPlants Compare
Gingko biloba HCCA Cluster_108 0.032 LandPlants Compare
Gingko biloba HCCA Cluster_145 0.059 LandPlants Compare
Gingko biloba HCCA Cluster_226 0.046 LandPlants Compare
Marchantia polymorpha HCCA Cluster_36 0.046 LandPlants Compare
Marchantia polymorpha HCCA Cluster_48 0.053 LandPlants Compare
Oryza sativa HCCA Cluster_65 0.073 LandPlants Compare
Oryza sativa HCCA Cluster_151 0.143 LandPlants Compare
Physcomitrella patens HCCA Cluster_99 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_116 0.038 LandPlants Compare
Picea abies HCCA Cluster_22 0.018 LandPlants Compare
Picea abies HCCA Cluster_226 0.037 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_29 0.056 LandPlants Compare
Solanum lycopersicum HCCA Cluster_1 0.026 LandPlants Compare
Solanum lycopersicum HCCA Cluster_2 0.022 LandPlants Compare
Solanum lycopersicum HCCA Cluster_4 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_6 0.041 LandPlants Compare
Solanum lycopersicum HCCA Cluster_7 0.048 LandPlants Compare
Solanum lycopersicum HCCA Cluster_8 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_10 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_16 0.021 LandPlants Compare
Solanum lycopersicum HCCA Cluster_21 0.023 LandPlants Compare
Solanum lycopersicum HCCA Cluster_23 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_25 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_51 0.108 LandPlants Compare
Solanum lycopersicum HCCA Cluster_52 0.036 LandPlants Compare
Solanum lycopersicum HCCA Cluster_54 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_66 0.027 LandPlants Compare
Solanum lycopersicum HCCA Cluster_75 0.037 LandPlants Compare
Solanum lycopersicum HCCA Cluster_84 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_91 0.037 LandPlants Compare
Solanum lycopersicum HCCA Cluster_92 0.041 LandPlants Compare
Solanum lycopersicum HCCA Cluster_93 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_96 0.058 LandPlants Compare
Solanum lycopersicum HCCA Cluster_130 0.094 LandPlants Compare
Solanum lycopersicum HCCA Cluster_153 0.024 LandPlants Compare
Solanum lycopersicum HCCA Cluster_155 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_169 0.026 LandPlants Compare
Solanum lycopersicum HCCA Cluster_195 0.028 LandPlants Compare
Solanum lycopersicum HCCA Cluster_201 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_226 0.063 LandPlants Compare
Solanum lycopersicum HCCA Cluster_291 0.033 LandPlants Compare
Solanum lycopersicum HCCA Cluster_300 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_316 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_499 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_40 0.05 LandPlants Compare
Vitis vinifera HCCA Cluster_242 0.032 LandPlants Compare
Zea mays HCCA Cluster_10 0.047 LandPlants Compare
Zea mays HCCA Cluster_45 0.015 LandPlants Compare
Zea mays HCCA Cluster_65 0.028 LandPlants Compare
Zea mays HCCA Cluster_135 0.027 LandPlants Compare
Zea mays HCCA Cluster_285 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_33 0.085 SeedPlants Compare
Amborella trichopoda HCCA Cluster_43 0.033 SeedPlants Compare
Amborella trichopoda HCCA Cluster_142 0.022 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_44 0.027 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_104 0.156 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_153 0.034 SeedPlants Compare
Gingko biloba HCCA Cluster_14 0.019 SeedPlants Compare
Gingko biloba HCCA Cluster_19 0.014 SeedPlants Compare
Gingko biloba HCCA Cluster_35 0.082 SeedPlants Compare
Gingko biloba HCCA Cluster_65 0.067 SeedPlants Compare
Gingko biloba HCCA Cluster_82 0.018 SeedPlants Compare
Gingko biloba HCCA Cluster_108 0.031 SeedPlants Compare
Gingko biloba HCCA Cluster_145 0.038 SeedPlants Compare
Gingko biloba HCCA Cluster_226 0.057 SeedPlants Compare
Oryza sativa HCCA Cluster_65 0.046 SeedPlants Compare
Oryza sativa HCCA Cluster_151 0.128 SeedPlants Compare
Picea abies HCCA Cluster_22 0.017 SeedPlants Compare
Picea abies HCCA Cluster_226 0.027 SeedPlants Compare
Picea abies HCCA Cluster_287 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_1 0.019 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_4 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_6 0.05 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_7 0.04 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_8 0.016 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_10 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_16 0.021 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_21 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_23 0.018 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_38 0.026 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_51 0.065 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_52 0.035 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_54 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_66 0.018 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_75 0.036 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_91 0.029 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_92 0.04 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_93 0.017 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_96 0.034 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_110 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_130 0.07 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_153 0.023 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_155 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_169 0.017 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_186 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_201 0.017 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_226 0.062 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_291 0.033 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_300 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_316 0.018 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_499 0.016 SeedPlants Compare
Vitis vinifera HCCA Cluster_40 0.042 SeedPlants Compare
Vitis vinifera HCCA Cluster_242 0.032 SeedPlants Compare
Zea mays HCCA Cluster_10 0.04 SeedPlants Compare
Zea mays HCCA Cluster_65 0.027 SeedPlants Compare
Zea mays HCCA Cluster_135 0.027 SeedPlants Compare
Zea mays HCCA Cluster_192 0.013 SeedPlants Compare
Sequences (105) (download table)

InterPro Domains

GO Terms

Family Terms