Coexpression cluster: Cluster_178 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006082 organic acid metabolic process 9.43% (5/53) 4.11 1.1e-05 0.000849
GO:0043436 oxoacid metabolic process 9.43% (5/53) 4.13 1e-05 0.001184
GO:0019752 carboxylic acid metabolic process 9.43% (5/53) 4.16 9e-06 0.002119
GO:0006520 cellular amino acid metabolic process 7.55% (4/53) 4.33 4.8e-05 0.002896
GO:0004812 aminoacyl-tRNA ligase activity 5.66% (3/53) 5.02 0.000108 0.003277
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.66% (3/53) 5.02 0.000108 0.003277
GO:0043039 tRNA aminoacylation 5.66% (3/53) 5.06 0.000101 0.00407
GO:0043038 amino acid activation 5.66% (3/53) 5.06 0.000101 0.00407
GO:0003824 catalytic activity 28.3% (15/53) 1.49 0.000159 0.004266
GO:0097367 carbohydrate derivative binding 15.09% (8/53) 2.05 0.000637 0.008565
GO:0140101 catalytic activity, acting on a tRNA 5.66% (3/53) 4.45 0.000354 0.008573
GO:0032553 ribonucleotide binding 15.09% (8/53) 2.05 0.000623 0.008873
GO:0043167 ion binding 18.87% (10/53) 1.77 0.000568 0.009157
GO:0044281 small molecule metabolic process 9.43% (5/53) 2.81 0.00072 0.009168
GO:0003674 molecular_function 41.51% (22/53) 0.98 0.000617 0.009336
GO:0017076 purine nucleotide binding 15.09% (8/53) 2.07 0.000562 0.00972
GO:0016874 ligase activity 5.66% (3/53) 3.88 0.001123 0.010065
GO:0034660 ncRNA metabolic process 5.66% (3/53) 3.88 0.001123 0.010065
GO:0006399 tRNA metabolic process 5.66% (3/53) 4.24 0.000543 0.010106
GO:0030554 adenyl nucleotide binding 13.21% (7/53) 2.11 0.0011 0.010646
GO:0032559 adenyl ribonucleotide binding 13.21% (7/53) 2.12 0.001083 0.01092
GO:0032555 purine ribonucleotide binding 15.09% (8/53) 2.08 0.000542 0.010925
GO:1901265 nucleoside phosphate binding 15.09% (8/53) 1.93 0.001062 0.011175
GO:0000166 nucleotide binding 15.09% (8/53) 1.93 0.001062 0.011175
GO:0043168 anion binding 15.09% (8/53) 1.93 0.001062 0.011175
GO:0035639 purine ribonucleoside triphosphate binding 15.09% (8/53) 2.09 0.000518 0.011394
GO:0036094 small molecule binding 15.09% (8/53) 1.87 0.001416 0.011817
GO:0008144 drug binding 13.21% (7/53) 2.06 0.001377 0.0119
GO:0005524 ATP binding 13.21% (7/53) 2.13 0.001034 0.012511
GO:1901363 heterocyclic compound binding 18.87% (10/53) 1.54 0.001903 0.014852
GO:0097159 organic cyclic compound binding 18.87% (10/53) 1.54 0.001903 0.014852
GO:0004665 prephenate dehydrogenase (NADP+) activity 1.89% (1/53) 8.86 0.002146 0.015271
GO:0006571 tyrosine biosynthetic process 1.89% (1/53) 8.86 0.002146 0.015271
GO:0008977 prephenate dehydrogenase (NAD+) activity 1.89% (1/53) 8.86 0.002146 0.015271
GO:0140098 catalytic activity, acting on RNA 5.66% (3/53) 3.38 0.002999 0.020739
GO:0006418 tRNA aminoacylation for protein translation 3.77% (2/53) 4.58 0.003181 0.021384
GO:1901564 organonitrogen compound metabolic process 13.21% (7/53) 1.82 0.003426 0.022406
GO:0032977 membrane insertase activity 1.89% (1/53) 7.86 0.004287 0.025934
GO:0070567 cytidylyltransferase activity 1.89% (1/53) 7.86 0.004287 0.025934
GO:0006570 tyrosine metabolic process 1.89% (1/53) 7.86 0.004287 0.025934
GO:0004743 pyruvate kinase activity 1.89% (1/53) 7.28 0.006423 0.036149
GO:0031420 alkali metal ion binding 1.89% (1/53) 7.28 0.006423 0.036149
GO:0030955 potassium ion binding 1.89% (1/53) 7.28 0.006423 0.036149
GO:0005488 binding 26.42% (14/53) 1.02 0.006799 0.037396
GO:0008565 protein transporter activity 1.89% (1/53) 6.86 0.008555 0.043133
GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway 1.89% (1/53) 6.86 0.008555 0.043133
GO:0016053 organic acid biosynthetic process 3.77% (2/53) 3.86 0.008364 0.044
GO:0046394 carboxylic acid biosynthetic process 3.77% (2/53) 3.86 0.008364 0.044
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_59 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_83 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_220 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_116 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.026 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_71 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_147 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_168 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_206 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_249 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_284 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_217 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_279 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_167 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_106 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_188 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_53 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_132 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_194 0.018 Gene family Compare
Sequences (53) (download table)

InterPro Domains

GO Terms

Family Terms