Coexpression cluster: Cluster_20 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901576 organic substance biosynthetic process 10.37% (17/164) 2.32 0.0 7e-06
GO:0044249 cellular biosynthetic process 10.37% (17/164) 2.36 0.0 7e-06
GO:0009058 biosynthetic process 10.98% (18/164) 2.29 0.0 1.1e-05
GO:0016746 transferase activity, transferring acyl groups 4.27% (7/164) 4.02 0.0 1.7e-05
GO:0003824 catalytic activity 23.78% (39/164) 1.24 0.0 2.1e-05
GO:0044271 cellular nitrogen compound biosynthetic process 7.93% (13/164) 2.43 1e-06 5.7e-05
GO:0019637 organophosphate metabolic process 6.1% (10/164) 2.8 2e-06 6.3e-05
GO:1901566 organonitrogen compound biosynthetic process 6.1% (10/164) 2.8 2e-06 6.3e-05
GO:0044281 small molecule metabolic process 7.32% (12/164) 2.44 2e-06 6.9e-05
GO:0016740 transferase activity 11.59% (19/164) 1.83 2e-06 6.9e-05
GO:0072330 monocarboxylic acid biosynthetic process 3.05% (5/164) 4.6 2e-06 7.7e-05
GO:0003674 molecular_function 37.2% (61/164) 0.82 2e-06 8e-05
GO:0044283 small molecule biosynthetic process 4.27% (7/164) 3.47 3e-06 8.9e-05
GO:0016053 organic acid biosynthetic process 3.66% (6/164) 3.82 4e-06 9.1e-05
GO:0046394 carboxylic acid biosynthetic process 3.66% (6/164) 3.82 4e-06 9.1e-05
GO:0032787 monocarboxylic acid metabolic process 3.05% (5/164) 4.39 4e-06 9.5e-05
GO:0090407 organophosphate biosynthetic process 5.49% (9/164) 2.81 6e-06 0.000115
GO:0008152 metabolic process 19.51% (32/164) 1.22 6e-06 0.000115
GO:0008150 biological_process 25.61% (42/164) 0.98 1e-05 0.000175
GO:0009165 nucleotide biosynthetic process 4.88% (8/164) 2.93 1.1e-05 0.00018
GO:1901293 nucleoside phosphate biosynthetic process 4.88% (8/164) 2.93 1.1e-05 0.00018
GO:0009108 coenzyme biosynthetic process 3.05% (5/164) 4.03 1.3e-05 0.000208
GO:0009117 nucleotide metabolic process 4.88% (8/164) 2.83 1.8e-05 0.000268
GO:0006753 nucleoside phosphate metabolic process 4.88% (8/164) 2.81 2e-05 0.00028
GO:0006732 coenzyme metabolic process 3.05% (5/164) 3.91 2e-05 0.000289
GO:0017144 drug metabolic process 3.05% (5/164) 3.8 3e-05 0.000389
GO:0019359 nicotinamide nucleotide biosynthetic process 2.44% (4/164) 4.43 3.4e-05 0.000401
GO:0072525 pyridine-containing compound biosynthetic process 2.44% (4/164) 4.43 3.4e-05 0.000401
GO:0019363 pyridine nucleotide biosynthetic process 2.44% (4/164) 4.43 3.4e-05 0.000401
GO:0019362 pyridine nucleotide metabolic process 2.44% (4/164) 4.38 3.9e-05 0.000419
GO:0072524 pyridine-containing compound metabolic process 2.44% (4/164) 4.38 3.9e-05 0.000419
GO:0046496 nicotinamide nucleotide metabolic process 2.44% (4/164) 4.38 3.9e-05 0.000419
GO:0055086 nucleobase-containing small molecule metabolic process 4.88% (8/164) 2.65 4.5e-05 0.000465
GO:0006733 oxidoreduction coenzyme metabolic process 2.44% (4/164) 4.28 5.1e-05 0.000517
GO:0051188 cofactor biosynthetic process 3.05% (5/164) 3.58 6.2e-05 0.000612
GO:0016491 oxidoreductase activity 6.1% (10/164) 2.16 8.8e-05 0.000834
GO:0018130 heterocycle biosynthetic process 5.49% (9/164) 2.29 0.000105 0.000977
GO:1901362 organic cyclic compound biosynthetic process 5.49% (9/164) 2.23 0.000141 0.001275
GO:0051186 cofactor metabolic process 3.05% (5/164) 3.31 0.000153 0.001348
GO:0016021 integral component of membrane 5.49% (9/164) 2.2 0.000165 0.001378
GO:0031224 intrinsic component of membrane 5.49% (9/164) 2.2 0.000165 0.001378
GO:0034654 nucleobase-containing compound biosynthetic process 4.88% (8/164) 2.35 0.000187 0.00153
GO:0019752 carboxylic acid metabolic process 3.66% (6/164) 2.8 0.000236 0.001886
GO:0043436 oxoacid metabolic process 3.66% (6/164) 2.76 0.000267 0.002085
GO:0055114 oxidation-reduction process 5.49% (9/164) 2.09 0.000294 0.00219
GO:0006082 organic acid metabolic process 3.66% (6/164) 2.74 0.00029 0.002209
GO:0009132 nucleoside diphosphate metabolic process 1.83% (3/164) 4.23 0.000525 0.003215
GO:0009135 purine nucleoside diphosphate metabolic process 1.83% (3/164) 4.23 0.000525 0.003215
GO:0009179 purine ribonucleoside diphosphate metabolic process 1.83% (3/164) 4.23 0.000525 0.003215
GO:0046939 nucleotide phosphorylation 1.83% (3/164) 4.23 0.000525 0.003215
GO:0009185 ribonucleoside diphosphate metabolic process 1.83% (3/164) 4.23 0.000525 0.003215
GO:0046031 ADP metabolic process 1.83% (3/164) 4.23 0.000525 0.003215
GO:0042866 pyruvate biosynthetic process 1.83% (3/164) 4.23 0.000525 0.003215
GO:0006757 ATP generation from ADP 1.83% (3/164) 4.23 0.000525 0.003215
GO:0006165 nucleoside diphosphate phosphorylation 1.83% (3/164) 4.23 0.000525 0.003215
GO:0006096 glycolytic process 1.83% (3/164) 4.23 0.000525 0.003215
GO:0019438 aromatic compound biosynthetic process 4.88% (8/164) 2.12 0.000547 0.003291
GO:0009166 nucleotide catabolic process 1.83% (3/164) 4.18 0.000594 0.00351
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.83% (3/164) 4.12 0.000668 0.003817
GO:0006090 pyruvate metabolic process 1.83% (3/164) 4.12 0.000668 0.003817
GO:0071704 organic substance metabolic process 14.02% (23/164) 1.05 0.000705 0.003965
GO:0016052 carbohydrate catabolic process 1.83% (3/164) 4.06 0.000748 0.004135
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 1.83% (3/164) 4.01 0.000833 0.004397
GO:1901292 nucleoside phosphate catabolic process 1.83% (3/164) 4.01 0.000833 0.004397
GO:0006629 lipid metabolic process 3.05% (5/164) 2.79 0.000813 0.004427
GO:0044425 membrane part 5.49% (9/164) 1.87 0.000868 0.004512
GO:0006091 generation of precursor metabolites and energy 1.83% (3/164) 3.96 0.000925 0.004597
GO:0046434 organophosphate catabolic process 1.83% (3/164) 3.96 0.000925 0.004597
GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 1.22% (2/164) 5.43 0.0009 0.004608
GO:0005975 carbohydrate metabolic process 3.05% (5/164) 2.65 0.001251 0.005723
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 1.83% (3/164) 3.82 0.001237 0.005734
GO:0009201 ribonucleoside triphosphate biosynthetic process 1.83% (3/164) 3.82 0.001237 0.005734
GO:0006754 ATP biosynthetic process 1.83% (3/164) 3.82 0.001237 0.005734
GO:0009145 purine nucleoside triphosphate biosynthetic process 1.83% (3/164) 3.82 0.001237 0.005734
GO:0009142 nucleoside triphosphate biosynthetic process 1.83% (3/164) 3.82 0.001237 0.005734
GO:0046700 heterocycle catabolic process 1.83% (3/164) 3.73 0.001478 0.006183
GO:0046034 ATP metabolic process 1.83% (3/164) 3.73 0.001478 0.006183
GO:0009156 ribonucleoside monophosphate biosynthetic process 1.83% (3/164) 3.73 0.001478 0.006183
GO:0009168 purine ribonucleoside monophosphate biosynthetic process 1.83% (3/164) 3.73 0.001478 0.006183
GO:0044270 cellular nitrogen compound catabolic process 1.83% (3/164) 3.73 0.001478 0.006183
GO:0009127 purine nucleoside monophosphate biosynthetic process 1.83% (3/164) 3.73 0.001478 0.006183
GO:0034655 nucleobase-containing compound catabolic process 1.83% (3/164) 3.73 0.001478 0.006183
GO:0009144 purine nucleoside triphosphate metabolic process 1.83% (3/164) 3.69 0.001609 0.0062
GO:0034404 nucleobase-containing small molecule biosynthetic process 1.83% (3/164) 3.69 0.001609 0.0062
GO:0019439 aromatic compound catabolic process 1.83% (3/164) 3.69 0.001609 0.0062
GO:0009124 nucleoside monophosphate biosynthetic process 1.83% (3/164) 3.69 0.001609 0.0062
GO:1901361 organic cyclic compound catabolic process 1.83% (3/164) 3.69 0.001609 0.0062
GO:0009205 purine ribonucleoside triphosphate metabolic process 1.83% (3/164) 3.69 0.001609 0.0062
GO:0009199 ribonucleoside triphosphate metabolic process 1.83% (3/164) 3.69 0.001609 0.0062
GO:0009126 purine nucleoside monophosphate metabolic process 1.83% (3/164) 3.65 0.001747 0.006442
GO:0009161 ribonucleoside monophosphate metabolic process 1.83% (3/164) 3.65 0.001747 0.006442
GO:0009167 purine ribonucleoside monophosphate metabolic process 1.83% (3/164) 3.65 0.001747 0.006442
GO:0000287 magnesium ion binding 1.83% (3/164) 3.65 0.001747 0.006442
GO:0046390 ribose phosphate biosynthetic process 1.83% (3/164) 3.61 0.001892 0.006689
GO:0009152 purine ribonucleotide biosynthetic process 1.83% (3/164) 3.61 0.001892 0.006689
GO:0009260 ribonucleotide biosynthetic process 1.83% (3/164) 3.61 0.001892 0.006689
GO:0009123 nucleoside monophosphate metabolic process 1.83% (3/164) 3.61 0.001892 0.006689
GO:0009141 nucleoside triphosphate metabolic process 1.83% (3/164) 3.57 0.002044 0.007153
GO:0044238 primary metabolic process 12.8% (21/164) 0.98 0.002229 0.007723
GO:0006164 purine nucleotide biosynthetic process 1.83% (3/164) 3.5 0.00237 0.008131
GO:0034641 cellular nitrogen compound metabolic process 7.93% (13/164) 1.29 0.002796 0.009312
GO:0006793 phosphorus metabolic process 6.1% (10/164) 1.52 0.002788 0.009374
GO:0006796 phosphate-containing compound metabolic process 6.1% (10/164) 1.52 0.002788 0.009374
GO:0072522 purine-containing compound biosynthetic process 1.83% (3/164) 3.39 0.002918 0.009624
GO:0009150 purine ribonucleotide metabolic process 1.83% (3/164) 3.36 0.003117 0.010085
GO:0009259 ribonucleotide metabolic process 1.83% (3/164) 3.36 0.003117 0.010085
GO:0016780 phosphotransferase activity, for other substituted phosphate groups 1.22% (2/164) 4.53 0.003257 0.01044
GO:0019693 ribose phosphate metabolic process 1.83% (3/164) 3.3 0.003538 0.011236
GO:0044237 cellular metabolic process 11.59% (19/164) 0.98 0.003645 0.01147
GO:0006163 purine nucleotide metabolic process 1.83% (3/164) 3.27 0.003761 0.011621
GO:0043604 amide biosynthetic process 2.44% (4/164) 2.66 0.003732 0.011636
GO:0005575 cellular_component 9.76% (16/164) 1.08 0.003895 0.011927
GO:0072521 purine-containing compound metabolic process 1.83% (3/164) 3.18 0.00448 0.0136
GO:0043603 cellular amide metabolic process 2.44% (4/164) 2.58 0.004641 0.013965
GO:0009435 NAD biosynthetic process 0.61% (1/164) 7.23 0.006639 0.017122
GO:0005536 glucose binding 0.61% (1/164) 7.23 0.006639 0.017122
GO:0004455 ketol-acid reductoisomerase activity 0.61% (1/164) 7.23 0.006639 0.017122
GO:0004396 hexokinase activity 0.61% (1/164) 7.23 0.006639 0.017122
GO:0004340 glucokinase activity 0.61% (1/164) 7.23 0.006639 0.017122
GO:0016885 ligase activity, forming carbon-carbon bonds 0.61% (1/164) 7.23 0.006639 0.017122
GO:0016421 CoA carboxylase activity 0.61% (1/164) 7.23 0.006639 0.017122
GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity 0.61% (1/164) 7.23 0.006639 0.017122
GO:0003989 acetyl-CoA carboxylase activity 0.61% (1/164) 7.23 0.006639 0.017122
GO:0019674 NAD metabolic process 0.61% (1/164) 7.23 0.006639 0.017122
GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity 0.61% (1/164) 7.23 0.006639 0.017122
GO:0004779 sulfate adenylyltransferase activity 0.61% (1/164) 7.23 0.006639 0.017122
GO:0046500 S-adenosylmethionine metabolic process 0.61% (1/164) 7.23 0.006639 0.017122
GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity 0.61% (1/164) 7.23 0.006639 0.017122
GO:0004781 sulfate adenylyltransferase (ATP) activity 0.61% (1/164) 7.23 0.006639 0.017122
GO:0006556 S-adenosylmethionine biosynthetic process 0.61% (1/164) 7.23 0.006639 0.017122
GO:0004478 methionine adenosyltransferase activity 0.61% (1/164) 7.23 0.006639 0.017122
GO:1901137 carbohydrate derivative biosynthetic process 1.83% (3/164) 2.96 0.006786 0.017371
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups 1.22% (2/164) 4.06 0.006251 0.018644
GO:0044255 cellular lipid metabolic process 1.83% (3/164) 2.99 0.006466 0.019121
GO:0050662 coenzyme binding 2.44% (4/164) 2.34 0.008237 0.020928
GO:0044248 cellular catabolic process 1.83% (3/164) 2.78 0.009684 0.024424
GO:1901575 organic substance catabolic process 1.83% (3/164) 2.67 0.011809 0.029565
GO:0070566 adenylyltransferase activity 0.61% (1/164) 6.23 0.013234 0.030466
GO:0051156 glucose 6-phosphate metabolic process 0.61% (1/164) 6.23 0.013234 0.030466
GO:0009081 branched-chain amino acid metabolic process 0.61% (1/164) 6.23 0.013234 0.030466
GO:0009082 branched-chain amino acid biosynthetic process 0.61% (1/164) 6.23 0.013234 0.030466
GO:0032977 membrane insertase activity 0.61% (1/164) 6.23 0.013234 0.030466
GO:0008897 holo-[acyl-carrier-protein] synthase activity 0.61% (1/164) 6.23 0.013234 0.030466
GO:0009536 plastid 0.61% (1/164) 6.23 0.013234 0.030466
GO:0009507 chloroplast 0.61% (1/164) 6.23 0.013234 0.030466
GO:0006633 fatty acid biosynthetic process 0.61% (1/164) 6.23 0.013234 0.030466
GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water 0.61% (1/164) 6.23 0.013234 0.030466
GO:0009987 cellular process 13.41% (22/164) 0.74 0.012369 0.030743
GO:0009056 catabolic process 1.83% (3/164) 2.61 0.013202 0.032577
GO:0005840 ribosome 1.83% (3/164) 2.52 0.015724 0.035717
GO:0046872 metal ion binding 4.27% (7/164) 1.43 0.015643 0.035771
GO:0043169 cation binding 4.27% (7/164) 1.42 0.01645 0.037122
GO:0006412 translation 1.83% (3/164) 2.48 0.016803 0.03767
GO:0003735 structural constituent of ribosome 1.83% (3/164) 2.46 0.017358 0.038662
GO:0030246 carbohydrate binding 1.22% (2/164) 3.28 0.017958 0.039739
GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 0.61% (1/164) 5.65 0.019786 0.040884
GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity 0.61% (1/164) 5.65 0.019786 0.040884
GO:0004618 phosphoglycerate kinase activity 0.61% (1/164) 5.65 0.019786 0.040884
GO:0006528 asparagine metabolic process 0.61% (1/164) 5.65 0.019786 0.040884
GO:0004749 ribose phosphate diphosphokinase activity 0.61% (1/164) 5.65 0.019786 0.040884
GO:0006529 asparagine biosynthetic process 0.61% (1/164) 5.65 0.019786 0.040884
GO:0048029 monosaccharide binding 0.61% (1/164) 5.65 0.019786 0.040884
GO:0030955 potassium ion binding 0.61% (1/164) 5.65 0.019786 0.040884
GO:0004743 pyruvate kinase activity 0.61% (1/164) 5.65 0.019786 0.040884
GO:0031420 alkali metal ion binding 0.61% (1/164) 5.65 0.019786 0.040884
GO:0016772 transferase activity, transferring phosphorus-containing groups 4.88% (8/164) 1.27 0.018835 0.041412
GO:0016829 lyase activity 2.44% (4/164) 1.94 0.020852 0.042828
GO:0043043 peptide biosynthetic process 1.83% (3/164) 2.34 0.021527 0.043692
GO:1901135 carbohydrate derivative metabolic process 1.83% (3/164) 2.34 0.021527 0.043692
GO:0008652 cellular amino acid biosynthetic process 1.22% (2/164) 3.11 0.022585 0.045569
GO:0005198 structural molecule activity 1.83% (3/164) 2.31 0.02281 0.045754
GO:0006518 peptide metabolic process 1.83% (3/164) 2.28 0.024134 0.048128
GO:0006644 phospholipid metabolic process 1.22% (2/164) 3.03 0.025064 0.049693
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_132 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_137 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_179 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_253 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_19 0.029 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_43 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_115 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_142 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_147 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_204 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_269 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_332 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_164 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_200 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_55 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_133 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_149 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_54 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_143 0.018 Gene family Compare
Sequences (164) (download table)

InterPro Domains

GO Terms

Family Terms