Coexpression cluster: Cluster_85 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008152 metabolic process 23.89% (27/113) 1.51 1e-06 4e-05
GO:0043603 cellular amide metabolic process 6.19% (7/113) 3.92 0.0 4.9e-05
GO:0006518 peptide metabolic process 6.19% (7/113) 4.04 0.0 5.5e-05
GO:0044424 intracellular part 11.5% (13/113) 2.41 1e-06 6.1e-05
GO:0003735 structural constituent of ribosome 5.31% (6/113) 4.0 2e-06 6.2e-05
GO:0044464 cell part 11.5% (13/113) 2.3 2e-06 6.3e-05
GO:0044444 cytoplasmic part 7.08% (8/113) 3.26 2e-06 6.6e-05
GO:0006412 translation 5.31% (6/113) 4.02 2e-06 7.6e-05
GO:0005840 ribosome 5.31% (6/113) 4.05 2e-06 7.9e-05
GO:0043043 peptide biosynthetic process 5.31% (6/113) 3.88 3e-06 8e-05
GO:0005198 structural molecule activity 5.31% (6/113) 3.85 4e-06 8.2e-05
GO:0043604 amide biosynthetic process 5.31% (6/113) 3.79 5e-06 9.7e-05
GO:0043228 non-membrane-bounded organelle 5.31% (6/113) 3.7 7e-06 0.000111
GO:0043232 intracellular non-membrane-bounded organelle 5.31% (6/113) 3.7 7e-06 0.000111
GO:1990904 ribonucleoprotein complex 5.31% (6/113) 3.71 7e-06 0.000121
GO:0009058 biosynthetic process 10.62% (12/113) 2.25 9e-06 0.00013
GO:0032991 protein-containing complex 8.85% (10/113) 2.46 1.5e-05 0.00019
GO:0034645 cellular macromolecule biosynthetic process 6.19% (7/113) 3.16 1.4e-05 0.000193
GO:0009059 macromolecule biosynthetic process 6.19% (7/113) 2.94 3.7e-05 0.000456
GO:1901566 organonitrogen compound biosynthetic process 6.19% (7/113) 2.82 6.4e-05 0.000714
GO:0005575 cellular_component 14.16% (16/113) 1.62 6.2e-05 0.000728
GO:0015979 photosynthesis 2.65% (3/113) 5.19 7.2e-05 0.000766
GO:0008150 biological_process 26.55% (30/113) 1.03 8.5e-05 0.000858
GO:0044237 cellular metabolic process 15.93% (18/113) 1.44 0.000103 0.001001
GO:0043229 intracellular organelle 5.31% (6/113) 2.76 0.000266 0.002479
GO:0043226 organelle 5.31% (6/113) 2.75 0.000281 0.002519
GO:0034641 cellular nitrogen compound metabolic process 10.62% (12/113) 1.71 0.000314 0.002714
GO:0098796 membrane protein complex 3.54% (4/113) 3.45 0.000502 0.004181
GO:0019898 extrinsic component of membrane 1.77% (2/113) 5.77 0.00057 0.004583
GO:0009987 cellular process 17.7% (20/113) 1.14 0.000653 0.005072
GO:0009523 photosystem II 1.77% (2/113) 5.6 0.000731 0.005496
GO:0009654 photosystem II oxygen evolving complex 1.77% (2/113) 5.31 0.00111 0.008086
GO:0016741 transferase activity, transferring one-carbon groups 3.54% (4/113) 3.11 0.001205 0.008508
GO:0044271 cellular nitrogen compound biosynthetic process 6.19% (7/113) 2.08 0.001424 0.008966
GO:0003674 molecular_function 33.63% (38/113) 0.67 0.001347 0.00897
GO:0005737 cytoplasm 2.65% (3/113) 3.77 0.001388 0.008982
GO:0009521 photosystem 1.77% (2/113) 5.19 0.001329 0.009105
GO:0044267 cellular protein metabolic process 7.08% (8/113) 1.82 0.002031 0.012454
GO:0044249 cellular biosynthetic process 7.08% (8/113) 1.81 0.002135 0.012753
GO:1990204 oxidoreductase complex 1.77% (2/113) 4.77 0.002387 0.013903
GO:1901576 organic substance biosynthetic process 7.08% (8/113) 1.77 0.00247 0.014039
GO:0043170 macromolecule metabolic process 11.5% (13/113) 1.27 0.002787 0.015461
GO:0006807 nitrogen compound metabolic process 13.27% (15/113) 1.15 0.002983 0.016162
GO:1901564 organonitrogen compound metabolic process 9.73% (11/113) 1.38 0.003393 0.017967
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity 0.88% (1/113) 7.77 0.004575 0.020111
GO:0051499 D-aminoacyl-tRNA deacylase activity 0.88% (1/113) 7.77 0.004575 0.020111
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 0.88% (1/113) 7.77 0.004575 0.020111
GO:0072341 modified amino acid binding 0.88% (1/113) 7.77 0.004575 0.020111
GO:0005542 folic acid binding 0.88% (1/113) 7.77 0.004575 0.020111
GO:0061617 MICOS complex 0.88% (1/113) 7.77 0.004575 0.020111
GO:0005622 intracellular 2.65% (3/113) 3.25 0.003922 0.020305
GO:0044436 thylakoid part 1.77% (2/113) 4.38 0.004115 0.020401
GO:0003824 catalytic activity 18.58% (21/113) 0.89 0.004054 0.020532
GO:0019538 protein metabolic process 7.96% (9/113) 1.49 0.00498 0.021486
GO:1902494 catalytic complex 2.65% (3/113) 3.07 0.005528 0.023417
GO:0046872 metal ion binding 5.31% (6/113) 1.75 0.009154 0.034403
GO:0002161 aminoacyl-tRNA editing activity 0.88% (1/113) 6.77 0.009128 0.034867
GO:0015995 chlorophyll biosynthetic process 0.88% (1/113) 6.77 0.009128 0.034867
GO:0016211 ammonia ligase activity 0.88% (1/113) 6.77 0.009128 0.034867
GO:0016880 acid-ammonia (or amide) ligase activity 0.88% (1/113) 6.77 0.009128 0.034867
GO:0015994 chlorophyll metabolic process 0.88% (1/113) 6.77 0.009128 0.034867
GO:0004356 glutamate-ammonia ligase activity 0.88% (1/113) 6.77 0.009128 0.034867
GO:0043169 cation binding 5.31% (6/113) 1.74 0.009595 0.034933
GO:0008168 methyltransferase activity 2.65% (3/113) 2.79 0.00951 0.035172
GO:0005506 iron ion binding 1.77% (2/113) 3.68 0.010576 0.037913
GO:0044260 cellular macromolecule metabolic process 7.96% (9/113) 1.29 0.011847 0.041822
GO:0019842 vitamin binding 1.77% (2/113) 3.49 0.013764 0.04648
GO:0006465 signal peptide processing 0.88% (1/113) 6.19 0.013662 0.046811
GO:0005787 signal peptidase complex 0.88% (1/113) 6.19 0.013662 0.046811
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_30 0.032 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_36 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_131 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_140 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_153 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_192 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_198 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_238 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_265 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_71 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_8 0.033 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_9 0.031 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_35 0.029 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_84 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_142 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_21 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_170 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_72 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_186 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_476 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_11 0.025 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_34 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_148 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_149 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_234 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_291 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_120 0.039 Gene family Compare
Vitis vinifera HCCA cluster Cluster_180 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_211 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_69 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_130 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_161 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_234 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_258 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_263 0.016 Gene family Compare
Sequences (113) (download table)

InterPro Domains

GO Terms

Family Terms