Coexpression cluster: Cluster_25 (HCCA)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0019222 regulation of metabolic process 7.3% (17/233) 2.75 0.0 0.0
GO:0060255 regulation of macromolecule metabolic process 7.3% (17/233) 2.75 0.0 0.0
GO:0050794 regulation of cellular process 8.58% (20/233) 2.44 0.0 0.0
GO:0010468 regulation of gene expression 7.3% (17/233) 2.77 0.0 0.0
GO:0051171 regulation of nitrogen compound metabolic process 6.87% (16/233) 2.68 0.0 0.0
GO:0080090 regulation of primary metabolic process 6.87% (16/233) 2.68 0.0 0.0
GO:0031323 regulation of cellular metabolic process 6.87% (16/233) 2.68 0.0 0.0
GO:0019219 regulation of nucleobase-containing compound metabolic process 6.87% (16/233) 2.69 0.0 0.0
GO:2001141 regulation of RNA biosynthetic process 6.87% (16/233) 2.7 0.0 0.0
GO:1903506 regulation of nucleic acid-templated transcription 6.87% (16/233) 2.7 0.0 0.0
GO:2000112 regulation of cellular macromolecule biosynthetic process 6.87% (16/233) 2.7 0.0 0.0
GO:0031326 regulation of cellular biosynthetic process 6.87% (16/233) 2.7 0.0 0.0
GO:0006355 regulation of transcription, DNA-templated 6.87% (16/233) 2.7 0.0 0.0
GO:0051252 regulation of RNA metabolic process 6.87% (16/233) 2.7 0.0 0.0
GO:0010556 regulation of macromolecule biosynthetic process 6.87% (16/233) 2.7 0.0 0.0
GO:0009889 regulation of biosynthetic process 6.87% (16/233) 2.7 0.0 0.0
GO:0065007 biological regulation 9.01% (21/233) 2.41 0.0 0.0
GO:0050789 regulation of biological process 9.01% (21/233) 2.43 0.0 0.0
GO:0003676 nucleic acid binding 6.44% (15/233) 1.51 0.000291 0.003232
GO:1901363 heterocyclic compound binding 9.01% (21/233) 1.0 0.002032 0.020416
GO:0097159 organic cyclic compound binding 9.01% (21/233) 1.0 0.002032 0.020416
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_146 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_159 0.023 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_207 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_232 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_8 0.027 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_105 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_125 0.019 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_185 0.02 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_252 0.023 Archaeplastida Compare
Gingko biloba HCCA Cluster_93 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_15 0.027 Archaeplastida Compare
Oryza sativa HCCA Cluster_51 0.024 Archaeplastida Compare
Oryza sativa HCCA Cluster_57 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_69 0.022 Archaeplastida Compare
Oryza sativa HCCA Cluster_163 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_268 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_302 0.022 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_15 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_19 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_102 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_115 0.019 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_10 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_19 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_25 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_80 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_178 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_187 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_282 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_1 0.021 Archaeplastida Compare
Vitis vinifera HCCA Cluster_26 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_117 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_151 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_199 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_17 0.022 Archaeplastida Compare
Zea mays HCCA Cluster_25 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_103 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_193 0.025 Archaeplastida Compare
Zea mays HCCA Cluster_328 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_47 0.019 LandPlants Compare
Amborella trichopoda HCCA Cluster_146 0.019 LandPlants Compare
Amborella trichopoda HCCA Cluster_159 0.017 LandPlants Compare
Amborella trichopoda HCCA Cluster_207 0.016 LandPlants Compare
Amborella trichopoda HCCA Cluster_232 0.024 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_105 0.017 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_145 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_189 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_252 0.02 LandPlants Compare
Oryza sativa HCCA Cluster_51 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_62 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_211 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_248 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_302 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_208 0.016 LandPlants Compare
Physcomitrella patens HCCA Cluster_279 0.015 LandPlants Compare
Picea abies HCCA Cluster_224 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_15 0.021 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_39 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_106 0.015 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_115 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_19 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_25 0.017 LandPlants Compare
Solanum lycopersicum HCCA Cluster_80 0.019 LandPlants Compare
Solanum lycopersicum HCCA Cluster_178 0.021 LandPlants Compare
Solanum lycopersicum HCCA Cluster_187 0.021 LandPlants Compare
Solanum lycopersicum HCCA Cluster_240 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_262 0.018 LandPlants Compare
Vitis vinifera HCCA Cluster_26 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_70 0.018 LandPlants Compare
Vitis vinifera HCCA Cluster_134 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_195 0.016 LandPlants Compare
Vitis vinifera HCCA Cluster_199 0.017 LandPlants Compare
Zea mays HCCA Cluster_17 0.015 LandPlants Compare
Zea mays HCCA Cluster_25 0.016 LandPlants Compare
Zea mays HCCA Cluster_113 0.017 LandPlants Compare
Zea mays HCCA Cluster_157 0.018 LandPlants Compare
Zea mays HCCA Cluster_193 0.019 LandPlants Compare
Zea mays HCCA Cluster_236 0.017 LandPlants Compare
Zea mays HCCA Cluster_328 0.017 LandPlants Compare
Sequences (233) (download table)

InterPro Domains

GO Terms

Family Terms