Coexpression cluster: Cluster_29 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 7.2% (9/125) 4.5 0.0 0.0
GO:0005198 structural molecule activity 7.2% (9/125) 4.19 0.0 0.0
GO:0009521 photosystem 4.0% (5/125) 5.89 0.0 1e-06
GO:0019684 photosynthesis, light reaction 2.4% (3/125) 7.06 1e-06 2.9e-05
GO:0098796 membrane protein complex 4.8% (6/125) 3.93 3e-06 9.1e-05
GO:0009522 photosystem I 2.4% (3/125) 6.06 9e-06 0.000266
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 1.6% (2/125) 6.89 9.3e-05 0.000876
GO:0009144 purine nucleoside triphosphate metabolic process 1.6% (2/125) 6.89 9.3e-05 0.000876
GO:0015985 energy coupled proton transport, down electrochemical gradient 1.6% (2/125) 6.89 9.3e-05 0.000876
GO:0015986 ATP synthesis coupled proton transport 1.6% (2/125) 6.89 9.3e-05 0.000876
GO:0009142 nucleoside triphosphate biosynthetic process 1.6% (2/125) 6.89 9.3e-05 0.000876
GO:0009141 nucleoside triphosphate metabolic process 1.6% (2/125) 6.89 9.3e-05 0.000876
GO:0009205 purine ribonucleoside triphosphate metabolic process 1.6% (2/125) 6.89 9.3e-05 0.000876
GO:0009145 purine nucleoside triphosphate biosynthetic process 1.6% (2/125) 6.89 9.3e-05 0.000876
GO:0009199 ribonucleoside triphosphate metabolic process 1.6% (2/125) 6.89 9.3e-05 0.000876
GO:0006754 ATP biosynthetic process 1.6% (2/125) 6.89 9.3e-05 0.000876
GO:0009201 ribonucleoside triphosphate biosynthetic process 1.6% (2/125) 6.89 9.3e-05 0.000876
GO:0032991 protein-containing complex 4.8% (6/125) 2.91 0.000152 0.001349
GO:0006091 generation of precursor metabolites and energy 3.2% (4/125) 4.09 9e-05 0.002161
GO:0005575 cellular_component 9.6% (12/125) 1.61 0.000574 0.004851
GO:0009523 photosystem II 1.6% (2/125) 5.67 0.000643 0.004943
GO:1902600 proton transmembrane transport 1.6% (2/125) 5.67 0.000643 0.004943
GO:0016651 oxidoreductase activity, acting on NAD(P)H 1.6% (2/125) 5.48 0.000855 0.006281
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.4% (3/125) 3.85 0.001165 0.0082
GO:0009260 ribonucleotide biosynthetic process 1.6% (2/125) 5.16 0.001364 0.008231
GO:0046390 ribose phosphate biosynthetic process 1.6% (2/125) 5.16 0.001364 0.008231
GO:0009152 purine ribonucleotide biosynthetic process 1.6% (2/125) 5.16 0.001364 0.008231
GO:0034062 5'-3' RNA polymerase activity 2.4% (3/125) 3.74 0.001463 0.00824
GO:0097747 RNA polymerase activity 2.4% (3/125) 3.74 0.001463 0.00824
GO:0046034 ATP metabolic process 2.4% (3/125) 3.82 0.001259 0.008512
GO:1901293 nucleoside phosphate biosynthetic process 1.6% (2/125) 4.78 0.002338 0.011621
GO:0006164 purine nucleotide biosynthetic process 1.6% (2/125) 4.78 0.002338 0.011621
GO:0009165 nucleotide biosynthetic process 1.6% (2/125) 4.78 0.002338 0.011621
GO:0015078 proton transmembrane transporter activity 1.6% (2/125) 4.78 0.002338 0.011621
GO:0072522 purine-containing compound biosynthetic process 1.6% (2/125) 4.67 0.002718 0.013123
GO:0016779 nucleotidyltransferase activity 2.4% (3/125) 3.26 0.003845 0.018052
GO:1901137 carbohydrate derivative biosynthetic process 1.6% (2/125) 4.39 0.004017 0.018349
GO:0031360 intrinsic component of thylakoid membrane 0.8% (1/125) 7.48 0.005609 0.022045
GO:0031361 integral component of thylakoid membrane 0.8% (1/125) 7.48 0.005609 0.022045
GO:0045333 cellular respiration 0.8% (1/125) 7.48 0.005609 0.022045
GO:0015980 energy derivation by oxidation of organic compounds 0.8% (1/125) 7.48 0.005609 0.022045
GO:0009060 aerobic respiration 0.8% (1/125) 7.48 0.005609 0.022045
GO:0015977 carbon fixation 0.8% (1/125) 7.48 0.005609 0.022045
GO:0140098 catalytic activity, acting on RNA 2.4% (3/125) 2.93 0.007175 0.027557
GO:0022890 inorganic cation transmembrane transporter activity 1.6% (2/125) 3.89 0.007946 0.029843
GO:0008324 cation transmembrane transporter activity 1.6% (2/125) 3.83 0.008606 0.031617
GO:0098662 inorganic cation transmembrane transport 1.6% (2/125) 3.52 0.01305 0.045011
GO:0098660 inorganic ion transmembrane transport 1.6% (2/125) 3.52 0.01305 0.045011
GO:0098655 cation transmembrane transport 1.6% (2/125) 3.52 0.01305 0.045011
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_33 0.119 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_43 0.037 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_1 0.046 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_44 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_104 0.124 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_57 0.02 Archaeplastida Compare
Gingko biloba HCCA Cluster_14 0.027 Archaeplastida Compare
Gingko biloba HCCA Cluster_19 0.025 Archaeplastida Compare
Gingko biloba HCCA Cluster_35 0.065 Archaeplastida Compare
Gingko biloba HCCA Cluster_65 0.043 Archaeplastida Compare
Gingko biloba HCCA Cluster_145 0.097 Archaeplastida Compare
Gingko biloba HCCA Cluster_226 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_36 0.065 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_48 0.059 Archaeplastida Compare
Oryza sativa HCCA Cluster_1 0.028 Archaeplastida Compare
Oryza sativa HCCA Cluster_65 0.103 Archaeplastida Compare
Oryza sativa HCCA Cluster_151 0.121 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_116 0.049 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_1 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_10 0.026 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_24 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_27 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_28 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_45 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_46 0.021 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_48 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_51 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_57 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_58 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_84 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_110 0.025 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_112 0.029 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_115 0.04 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_119 0.019 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_122 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_132 0.028 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_179 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_211 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_1 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_5 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_6 0.025 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_21 0.037 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_51 0.149 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_75 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_91 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_92 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_149 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_153 0.044 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_193 0.062 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_195 0.024 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_226 0.058 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_291 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_23 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_33 0.023 Archaeplastida Compare
Vitis vinifera HCCA Cluster_40 0.056 Archaeplastida Compare
Zea mays HCCA Cluster_10 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_45 0.042 Archaeplastida Compare
Zea mays HCCA Cluster_65 0.055 Archaeplastida Compare
Zea mays HCCA Cluster_118 0.029 Archaeplastida Compare
Zea mays HCCA Cluster_141 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_33 0.12 LandPlants Compare
Amborella trichopoda HCCA Cluster_43 0.033 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_1 0.046 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_44 0.02 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_104 0.124 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_153 0.017 LandPlants Compare
Gingko biloba HCCA Cluster_14 0.028 LandPlants Compare
Gingko biloba HCCA Cluster_19 0.026 LandPlants Compare
Gingko biloba HCCA Cluster_35 0.065 LandPlants Compare
Gingko biloba HCCA Cluster_65 0.043 LandPlants Compare
Gingko biloba HCCA Cluster_145 0.098 LandPlants Compare
Marchantia polymorpha HCCA Cluster_36 0.059 LandPlants Compare
Marchantia polymorpha HCCA Cluster_48 0.06 LandPlants Compare
Oryza sativa HCCA Cluster_1 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_65 0.104 LandPlants Compare
Oryza sativa HCCA Cluster_151 0.121 LandPlants Compare
Physcomitrella patens HCCA Cluster_116 0.043 LandPlants Compare
Picea abies HCCA Cluster_226 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_1 0.02 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_7 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_10 0.026 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_24 0.025 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_27 0.029 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_28 0.021 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_39 0.015 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_41 0.017 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_45 0.029 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_46 0.021 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_48 0.029 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_50 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_51 0.025 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_53 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_57 0.02 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_66 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_69 0.017 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_70 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_75 0.017 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_84 0.019 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_90 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_106 0.017 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_110 0.025 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_112 0.024 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_113 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_114 0.015 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_115 0.032 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_119 0.02 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_122 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_129 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_132 0.022 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_162 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_177 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_178 0.018 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_179 0.023 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_211 0.021 LandPlants Compare
Solanum lycopersicum HCCA Cluster_1 0.023 LandPlants Compare
Solanum lycopersicum HCCA Cluster_5 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_6 0.019 LandPlants Compare
Solanum lycopersicum HCCA Cluster_16 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_21 0.032 LandPlants Compare
Solanum lycopersicum HCCA Cluster_51 0.15 LandPlants Compare
Solanum lycopersicum HCCA Cluster_75 0.028 LandPlants Compare
Solanum lycopersicum HCCA Cluster_91 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_92 0.033 LandPlants Compare
Solanum lycopersicum HCCA Cluster_130 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_153 0.044 LandPlants Compare
Solanum lycopersicum HCCA Cluster_193 0.056 LandPlants Compare
Solanum lycopersicum HCCA Cluster_195 0.018 LandPlants Compare
Solanum lycopersicum HCCA Cluster_226 0.028 LandPlants Compare
Solanum lycopersicum HCCA Cluster_291 0.025 LandPlants Compare
Vitis vinifera HCCA Cluster_23 0.019 LandPlants Compare
Vitis vinifera HCCA Cluster_33 0.023 LandPlants Compare
Vitis vinifera HCCA Cluster_40 0.051 LandPlants Compare
Zea mays HCCA Cluster_10 0.039 LandPlants Compare
Zea mays HCCA Cluster_45 0.042 LandPlants Compare
Zea mays HCCA Cluster_65 0.055 LandPlants Compare
Zea mays HCCA Cluster_76 0.015 LandPlants Compare
Zea mays HCCA Cluster_118 0.029 LandPlants Compare
Zea mays HCCA Cluster_135 0.015 LandPlants Compare
Zea mays HCCA Cluster_141 0.019 LandPlants Compare
Sequences (125) (download table)

InterPro Domains

GO Terms

Family Terms