Coexpression cluster: Cluster_199 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 31.25% (35/112) 1.26 0.0 0.000142
GO:0003674 molecular_function 41.07% (46/112) 0.96 1e-06 0.000219
GO:0008144 drug binding 13.39% (15/112) 2.08 3e-06 0.000296
GO:0043168 anion binding 14.29% (16/112) 1.85 9e-06 0.000407
GO:0030554 adenyl nucleotide binding 12.5% (14/112) 2.03 8e-06 0.00046
GO:0016070 RNA metabolic process 7.14% (8/112) 2.91 1.2e-05 0.000487
GO:0032559 adenyl ribonucleotide binding 12.5% (14/112) 2.04 8e-06 0.000536
GO:0036094 small molecule binding 14.29% (16/112) 1.79 1.5e-05 0.000553
GO:0005524 ATP binding 12.5% (14/112) 2.05 7e-06 0.000612
GO:1901265 nucleoside phosphate binding 13.39% (15/112) 1.76 3.6e-05 0.000786
GO:0000166 nucleotide binding 13.39% (15/112) 1.76 3.6e-05 0.000786
GO:1901363 heterocyclic compound binding 17.86% (20/112) 1.46 3.1e-05 0.000869
GO:0097159 organic cyclic compound binding 17.86% (20/112) 1.46 3.1e-05 0.000869
GO:0140098 catalytic activity, acting on RNA 5.36% (6/112) 3.3 3.4e-05 0.000869
GO:0035639 purine ribonucleoside triphosphate binding 12.5% (14/112) 1.82 4.2e-05 0.00088
GO:0032555 purine ribonucleotide binding 12.5% (14/112) 1.81 4.6e-05 0.000892
GO:0017076 purine nucleotide binding 12.5% (14/112) 1.8 4.9e-05 0.000895
GO:0008150 biological_process 27.68% (31/112) 1.09 2.7e-05 0.000903
GO:0097367 carbohydrate derivative binding 12.5% (14/112) 1.77 6e-05 0.000988
GO:0032553 ribonucleotide binding 12.5% (14/112) 1.78 5.7e-05 0.001004
GO:0009987 cellular process 19.64% (22/112) 1.29 7.5e-05 0.001187
GO:0032774 RNA biosynthetic process 3.57% (4/112) 3.72 0.000246 0.003556
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.68% (3/112) 4.62 0.000245 0.0037
GO:0005515 protein binding 14.29% (16/112) 1.42 0.000304 0.004203
GO:0097747 RNA polymerase activity 2.68% (3/112) 4.46 0.000337 0.004302
GO:0034062 5'-3' RNA polymerase activity 2.68% (3/112) 4.46 0.000337 0.004302
GO:0006399 tRNA metabolic process 3.57% (4/112) 3.58 0.000361 0.004437
GO:0043167 ion binding 14.29% (16/112) 1.37 0.000436 0.00517
GO:0097659 nucleic acid-templated transcription 2.68% (3/112) 4.08 0.000736 0.008148
GO:0006351 transcription, DNA-templated 2.68% (3/112) 4.08 0.000736 0.008148
GO:0006139 nucleobase-containing compound metabolic process 8.93% (10/112) 1.74 0.00087 0.009027
GO:0044237 cellular metabolic process 14.29% (16/112) 1.28 0.000849 0.009088
GO:0034660 ncRNA metabolic process 3.57% (4/112) 3.22 0.000928 0.009339
GO:0090304 nucleic acid metabolic process 7.14% (8/112) 1.94 0.001213 0.01184
GO:0048193 Golgi vesicle transport 1.79% (2/112) 5.2 0.001305 0.012383
GO:0046483 heterocycle metabolic process 8.93% (10/112) 1.64 0.001425 0.013137
GO:0006725 cellular aromatic compound metabolic process 8.93% (10/112) 1.64 0.00147 0.013189
GO:1901360 organic cyclic compound metabolic process 8.93% (10/112) 1.62 0.00163 0.013873
GO:0003824 catalytic activity 19.64% (22/112) 0.97 0.001608 0.014053
GO:0016772 transferase activity, transferring phosphorus-containing groups 7.14% (8/112) 1.82 0.002018 0.016753
GO:0044238 primary metabolic process 14.29% (16/112) 1.14 0.002369 0.019184
GO:0006793 phosphorus metabolic process 7.14% (8/112) 1.75 0.002757 0.020341
GO:0006796 phosphate-containing compound metabolic process 7.14% (8/112) 1.75 0.002757 0.020341
GO:0043170 macromolecule metabolic process 11.61% (13/112) 1.29 0.002576 0.020361
GO:0006807 nitrogen compound metabolic process 13.39% (15/112) 1.16 0.002734 0.021112
GO:0140101 catalytic activity, acting on a tRNA 2.68% (3/112) 3.37 0.003092 0.022316
GO:0016740 transferase activity 8.93% (10/112) 1.45 0.00364 0.024665
GO:0034641 cellular nitrogen compound metabolic process 8.93% (10/112) 1.46 0.003577 0.024741
GO:0071704 organic substance metabolic process 14.29% (16/112) 1.08 0.003571 0.025224
GO:0006425 glutaminyl-tRNA aminoacylation 0.89% (1/112) 7.78 0.004534 0.027876
GO:0004819 glutamine-tRNA ligase activity 0.89% (1/112) 7.78 0.004534 0.027876
GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity 0.89% (1/112) 7.78 0.004534 0.027876
GO:0006890 retrograde vesicle-mediated transport, Golgi to ER 0.89% (1/112) 7.78 0.004534 0.027876
GO:0034654 nucleobase-containing compound biosynthetic process 4.46% (5/112) 2.22 0.004472 0.029693
GO:0016779 nucleotidyltransferase activity 2.68% (3/112) 3.1 0.005202 0.030302
GO:0006810 transport 6.25% (7/112) 1.75 0.00503 0.03036
GO:0051234 establishment of localization 6.25% (7/112) 1.74 0.005148 0.030519
GO:0051179 localization 6.25% (7/112) 1.73 0.005453 0.031211
GO:0004813 alanine-tRNA ligase activity 0.89% (1/112) 6.78 0.009048 0.044174
GO:0006419 alanyl-tRNA aminoacylation 0.89% (1/112) 6.78 0.009048 0.044174
GO:0006891 intra-Golgi vesicle-mediated transport 0.89% (1/112) 6.78 0.009048 0.044174
GO:0006021 inositol biosynthetic process 0.89% (1/112) 6.78 0.009048 0.044174
GO:0015629 actin cytoskeleton 0.89% (1/112) 6.78 0.009048 0.044174
GO:0006020 inositol metabolic process 0.89% (1/112) 6.78 0.009048 0.044174
GO:0004512 inositol-3-phosphate synthase activity 0.89% (1/112) 6.78 0.009048 0.044174
GO:0008033 tRNA processing 1.79% (2/112) 3.78 0.009248 0.044496
GO:0018130 heterocycle biosynthetic process 4.46% (5/112) 1.99 0.008797 0.047878
GO:0019438 aromatic compound biosynthetic process 4.46% (5/112) 1.99 0.008669 0.04797
GO:0006468 protein phosphorylation 4.46% (5/112) 1.99 0.008669 0.04797
GO:1901362 organic cyclic compound biosynthetic process 4.46% (5/112) 1.93 0.010288 0.048793
GO:0034314 Arp2/3 complex-mediated actin nucleation 0.89% (1/112) 6.2 0.013541 0.049952
GO:0044089 positive regulation of cellular component biogenesis 0.89% (1/112) 6.2 0.013541 0.049952
GO:0045010 actin nucleation 0.89% (1/112) 6.2 0.013541 0.049952
GO:0097435 supramolecular fiber organization 0.89% (1/112) 6.2 0.013541 0.049952
GO:0016872 intramolecular lyase activity 0.89% (1/112) 6.2 0.013541 0.049952
GO:0005669 transcription factor TFIID complex 0.89% (1/112) 6.2 0.013541 0.049952
GO:1902905 positive regulation of supramolecular fiber organization 0.89% (1/112) 6.2 0.013541 0.049952
GO:0051495 positive regulation of cytoskeleton organization 0.89% (1/112) 6.2 0.013541 0.049952
GO:0017119 Golgi transport complex 0.89% (1/112) 6.2 0.013541 0.049952
GO:0005856 cytoskeleton 0.89% (1/112) 6.2 0.013541 0.049952
GO:0030838 positive regulation of actin filament polymerization 0.89% (1/112) 6.2 0.013541 0.049952
GO:0005885 Arp2/3 protein complex 0.89% (1/112) 6.2 0.013541 0.049952
GO:0031334 positive regulation of protein complex assembly 0.89% (1/112) 6.2 0.013541 0.049952
GO:0007015 actin filament organization 0.89% (1/112) 6.2 0.013541 0.049952
GO:0010638 positive regulation of organelle organization 0.89% (1/112) 6.2 0.013541 0.049952
GO:0032273 positive regulation of protein polymerization 0.89% (1/112) 6.2 0.013541 0.049952
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_40 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_48 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_54 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_93 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_127 0.032 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_171 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_223 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_251 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_313 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_51 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_105 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_110 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_125 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_135 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_139 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_146 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_177 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_190 0.017 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_191 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_12 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_17 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_37 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_50 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_85 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_99 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_128 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_160 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_26 0.03 Gene family Compare
Oryza sativa HCCA cluster Cluster_41 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_53 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_66 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_106 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_151 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_174 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_189 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_196 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_224 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_236 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_263 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_278 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_87 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_218 0.028 Gene family Compare
Picea abies HCCA cluster Cluster_235 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_250 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_320 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_343 0.028 Gene family Compare
Picea abies HCCA cluster Cluster_374 0.025 Gene family Compare
Picea abies HCCA cluster Cluster_388 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_397 0.029 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_31 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_32 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_74 0.024 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_96 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_158 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_37 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_137 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_138 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_140 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_164 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_274 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_275 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_285 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_289 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_303 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_309 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.036 Gene family Compare
Vitis vinifera HCCA cluster Cluster_99 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_103 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_147 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_172 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_192 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_204 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_231 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_241 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_37 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_86 0.032 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.024 Gene family Compare
Zea mays HCCA cluster Cluster_139 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_148 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_191 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_326 0.014 Gene family Compare
Sequences (112) (download table)

InterPro Domains

GO Terms

Family Terms