Coexpression cluster: Cluster_5 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 26.09% (12/46) 7.36 0.0 0.0
GO:0034062 5'-3' RNA polymerase activity 26.09% (12/46) 7.21 0.0 0.0
GO:0097747 RNA polymerase activity 26.09% (12/46) 7.21 0.0 0.0
GO:0006351 DNA-templated transcription 26.09% (12/46) 6.34 0.0 0.0
GO:0097659 nucleic acid-templated transcription 26.09% (12/46) 6.34 0.0 0.0
GO:0016779 nucleotidyltransferase activity 26.09% (12/46) 6.31 0.0 0.0
GO:0009059 macromolecule biosynthetic process 36.96% (17/46) 4.54 0.0 0.0
GO:0032774 RNA biosynthetic process 26.09% (12/46) 5.96 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 36.96% (17/46) 4.38 0.0 0.0
GO:0140098 catalytic activity, acting on RNA 26.09% (12/46) 5.41 0.0 0.0
GO:0034654 nucleobase-containing compound biosynthetic process 26.09% (12/46) 5.39 0.0 0.0
GO:0044249 cellular biosynthetic process 36.96% (17/46) 3.94 0.0 0.0
GO:0018130 heterocycle biosynthetic process 26.09% (12/46) 5.13 0.0 0.0
GO:0019438 aromatic compound biosynthetic process 26.09% (12/46) 5.14 0.0 0.0
GO:1901576 organic substance biosynthetic process 36.96% (17/46) 3.86 0.0 0.0
GO:0140640 catalytic activity, acting on a nucleic acid 26.09% (12/46) 5.0 0.0 0.0
GO:1901362 organic cyclic compound biosynthetic process 26.09% (12/46) 4.97 0.0 0.0
GO:0009058 biosynthetic process 36.96% (17/46) 3.71 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 36.96% (17/46) 3.54 0.0 0.0
GO:0009536 plastid 17.39% (8/46) 6.45 0.0 0.0
GO:0009507 chloroplast 17.39% (8/46) 6.45 0.0 0.0
GO:0016070 RNA metabolic process 26.09% (12/46) 4.46 0.0 0.0
GO:0043229 intracellular organelle 30.43% (14/46) 3.83 0.0 0.0
GO:0043226 organelle 30.43% (14/46) 3.83 0.0 0.0
GO:0090304 nucleic acid metabolic process 26.09% (12/46) 4.09 0.0 0.0
GO:0006139 nucleobase-containing compound metabolic process 26.09% (12/46) 3.7 0.0 0.0
GO:0046483 heterocycle metabolic process 26.09% (12/46) 3.58 0.0 0.0
GO:0006725 cellular aromatic compound metabolic process 26.09% (12/46) 3.57 0.0 0.0
GO:1901360 organic cyclic compound metabolic process 26.09% (12/46) 3.53 0.0 0.0
GO:0003677 DNA binding 26.09% (12/46) 3.23 0.0 0.0
GO:0043227 membrane-bounded organelle 17.39% (8/46) 4.21 0.0 0.0
GO:0043231 intracellular membrane-bounded organelle 17.39% (8/46) 4.21 0.0 0.0
GO:0043170 macromolecule metabolic process 36.96% (17/46) 2.25 0.0 0.0
GO:0110165 cellular anatomical entity 30.43% (14/46) 2.51 0.0 0.0
GO:0006807 nitrogen compound metabolic process 36.96% (17/46) 2.12 0.0 0.0
GO:0044237 cellular metabolic process 36.96% (17/46) 2.12 0.0 0.0
GO:0016772 transferase activity, transferring phosphorus-containing groups 26.09% (12/46) 2.77 0.0 0.0
GO:1901363 heterocyclic compound binding 43.48% (20/46) 1.82 0.0 0.0
GO:0097159 organic cyclic compound binding 43.48% (20/46) 1.82 0.0 0.0
GO:0003676 nucleic acid binding 28.26% (13/46) 2.51 0.0 1e-06
GO:0005575 cellular_component 30.43% (14/46) 2.18 1e-06 3e-06
GO:0044238 primary metabolic process 36.96% (17/46) 1.83 2e-06 4e-06
GO:0071704 organic substance metabolic process 36.96% (17/46) 1.77 3e-06 6e-06
GO:0008152 metabolic process 36.96% (17/46) 1.64 1e-05 2.2e-05
GO:0043228 non-membrane-bounded organelle 13.04% (6/46) 3.45 1.8e-05 3.7e-05
GO:0043232 intracellular non-membrane-bounded organelle 13.04% (6/46) 3.45 1.8e-05 3.7e-05
GO:0009987 cellular process 36.96% (17/46) 1.54 2.6e-05 5.3e-05
GO:0016740 transferase activity 26.09% (12/46) 1.93 4.6e-05 9.2e-05
GO:0005840 ribosome 10.87% (5/46) 3.47 8.8e-05 0.000172
GO:0006412 translation 10.87% (5/46) 3.43 9.9e-05 0.000191
GO:0043043 peptide biosynthetic process 10.87% (5/46) 3.41 0.000105 0.000194
GO:0003735 structural constituent of ribosome 10.87% (5/46) 3.42 0.000104 0.000195
GO:0043604 amide biosynthetic process 10.87% (5/46) 3.4 0.000108 0.000195
GO:0006518 peptide metabolic process 10.87% (5/46) 3.38 0.000117 0.000207
GO:0043603 amide metabolic process 10.87% (5/46) 3.36 0.000125 0.000217
GO:0005198 structural molecule activity 10.87% (5/46) 3.31 0.000147 0.000252
GO:0034645 cellular macromolecule biosynthetic process 10.87% (5/46) 3.22 0.000194 0.000326
GO:0005488 binding 43.48% (20/46) 1.12 0.000251 0.000415
GO:1901566 organonitrogen compound biosynthetic process 10.87% (5/46) 2.87 0.000582 0.000947
GO:0005524 ATP binding 17.39% (8/46) 2.03 0.000662 0.001059
GO:0032559 adenyl ribonucleotide binding 17.39% (8/46) 1.84 0.00155 0.002399
GO:0035639 purine ribonucleoside triphosphate binding 17.39% (8/46) 1.84 0.001532 0.002411
GO:0044260 cellular macromolecule metabolic process 10.87% (5/46) 2.47 0.00204 0.003108
GO:0030554 adenyl nucleotide binding 17.39% (8/46) 1.75 0.002231 0.003347
GO:0032555 purine ribonucleotide binding 17.39% (8/46) 1.67 0.003173 0.004686
GO:0032553 ribonucleotide binding 17.39% (8/46) 1.66 0.003333 0.004848
GO:0097367 carbohydrate derivative binding 17.39% (8/46) 1.64 0.003567 0.005111
GO:0017076 purine nucleotide binding 17.39% (8/46) 1.59 0.004429 0.006253
GO:0008150 biological_process 36.96% (17/46) 0.89 0.005684 0.007795
GO:0003674 molecular_function 54.35% (25/46) 0.63 0.005665 0.007881
GO:1901265 nucleoside phosphate binding 17.39% (8/46) 1.52 0.006077 0.008102
GO:0000166 nucleotide binding 17.39% (8/46) 1.52 0.006077 0.008102
GO:0043168 anion binding 17.39% (8/46) 1.51 0.006269 0.008245
GO:0036094 small molecule binding 17.39% (8/46) 1.44 0.008095 0.010501
GO:0050136 NADH dehydrogenase (quinone) activity 2.17% (1/46) 5.07 0.029291 0.03605
GO:0008137 NADH dehydrogenase (ubiquinone) activity 2.17% (1/46) 5.07 0.029291 0.03605
GO:0003955 NAD(P)H dehydrogenase (quinone) activity 2.17% (1/46) 5.07 0.029291 0.03605
GO:0003954 NADH dehydrogenase activity 2.17% (1/46) 5.07 0.029291 0.03605
GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor 2.17% (1/46) 4.89 0.033219 0.040368
GO:0019843 rRNA binding 2.17% (1/46) 4.78 0.03583 0.042996
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_18 0.015 OrthoFinder output from all 39 species Compare
Amborella trichopoda HCCA Cluster_87 0.061 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_42 0.006 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_74 0.104 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_88 0.007 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_92 0.011 OrthoFinder output from all 39 species Compare
Arabidopsis thaliana HCCA Cluster_108 0.028 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_3 0.015 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_9 0.014 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_22 0.023 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_73 0.018 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_75 0.013 OrthoFinder output from all 39 species Compare
Gingko biloba HCCA Cluster_197 0.021 OrthoFinder output from all 39 species Compare
Marchantia polymorpha HCCA Cluster_5 0.017 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_24 0.01 OrthoFinder output from all 39 species Compare
Oryza sativa HCCA Cluster_121 0.083 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_6 0.009 OrthoFinder output from all 39 species Compare
Physcomitrella patens HCCA Cluster_199 0.014 OrthoFinder output from all 39 species Compare
Selaginella moellendorffii HCCA Cluster_102 0.005 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_1 0.025 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_2 0.027 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_3 0.038 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_4 0.113 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_9 0.004 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_12 0.015 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_13 0.008 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_14 0.008 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_16 0.012 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_27 0.026 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_28 0.024 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_29 0.009 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_35 0.009 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_37 0.004 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_39 0.008 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_40 0.014 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_43 0.008 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_48 0.013 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_51 0.008 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_57 0.015 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_62 0.006 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_70 0.022 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_71 0.037 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_75 0.029 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_85 0.009 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_89 0.037 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_90 0.008 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_91 0.013 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_95 0.01 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_102 0.009 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_117 0.005 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_119 0.006 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_120 0.007 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_122 0.013 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_125 0.013 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_127 0.021 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_138 0.03 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_139 0.009 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_143 0.015 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_156 0.021 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_160 0.031 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_161 0.01 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_167 0.025 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_180 0.007 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_185 0.009 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_186 0.026 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_195 0.013 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_200 0.014 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_204 0.064 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_206 0.011 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_240 0.01 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_252 0.012 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_258 0.013 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_279 0.014 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_293 0.038 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_302 0.034 OrthoFinder output from all 39 species Compare
Solanum lycopersicum HCCA Cluster_318 0.027 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_5 0.009 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_20 0.018 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_139 0.012 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_177 0.008 OrthoFinder output from all 39 species Compare
Vitis vinifera HCCA Cluster_226 0.014 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_40 0.049 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_41 0.051 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_113 0.015 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_178 0.014 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_192 0.009 OrthoFinder output from all 39 species Compare
Zea mays HCCA Cluster_241 0.016 OrthoFinder output from all 39 species Compare
Picea abies HCCA Cluster_250 0.01 OrthoFinder output from all 39 species Compare
Abrodictyum obscurum HCCA Cluster_9 0.01 OrthoFinder output from all 39 species Compare
Angiopteris evecta HCCA Cluster_60 0.024 OrthoFinder output from all 39 species Compare
Equisetum hyemale HCCA Cluster_227 0.011 OrthoFinder output from all 39 species Compare
Psilotum nudum HCCA Cluster_141 0.015 OrthoFinder output from all 39 species Compare
Lygodium flexuosum HCCA Cluster_27 0.01 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_107 0.006 OrthoFinder output from all 39 species Compare
Actinostachys digitata HCCA Cluster_386 0.017 OrthoFinder output from all 39 species Compare
Sequences (46) (download table)

InterPro Domains

GO Terms

Family Terms