Coexpression cluster: Cluster_75 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 20.0% (20/100) 4.46 0.0 0.0
GO:0005840 ribosome 20.0% (20/100) 4.51 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 20.0% (20/100) 4.37 0.0 0.0
GO:0043228 non-membrane-bounded organelle 20.0% (20/100) 4.37 0.0 0.0
GO:0005198 structural molecule activity 20.0% (20/100) 4.34 0.0 0.0
GO:1990904 ribonucleoprotein complex 20.0% (20/100) 4.27 0.0 0.0
GO:0006412 translation 19.0% (19/100) 4.41 0.0 0.0
GO:0032991 protein-containing complex 27.0% (27/100) 3.34 0.0 0.0
GO:0043043 peptide biosynthetic process 19.0% (19/100) 4.36 0.0 0.0
GO:0043604 amide biosynthetic process 19.0% (19/100) 4.3 0.0 0.0
GO:0006518 peptide metabolic process 19.0% (19/100) 4.29 0.0 0.0
GO:0043603 cellular amide metabolic process 19.0% (19/100) 4.22 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 21.0% (21/100) 3.73 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 21.0% (21/100) 3.54 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 19.0% (19/100) 3.76 0.0 0.0
GO:0044444 cytoplasmic part 20.0% (20/100) 3.55 0.0 0.0
GO:0044464 cell part 28.0% (28/100) 2.74 0.0 0.0
GO:0044424 intracellular part 27.0% (27/100) 2.78 0.0 0.0
GO:0009059 macromolecule biosynthetic process 19.0% (19/100) 3.63 0.0 0.0
GO:0043226 organelle 20.0% (20/100) 3.29 0.0 0.0
GO:0043229 intracellular organelle 20.0% (20/100) 3.29 0.0 0.0
GO:0044249 cellular biosynthetic process 22.0% (22/100) 3.06 0.0 0.0
GO:1901576 organic substance biosynthetic process 22.0% (22/100) 2.97 0.0 0.0
GO:0009058 biosynthetic process 22.0% (22/100) 2.83 0.0 0.0
GO:0005622 intracellular 12.0% (12/100) 4.29 0.0 0.0
GO:0009523 photosystem II 7.0% (7/100) 6.29 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 22.0% (22/100) 2.54 0.0 0.0
GO:0009521 photosystem 7.0% (7/100) 5.63 0.0 0.0
GO:0015979 photosynthesis 7.0% (7/100) 5.56 0.0 0.0
GO:0044436 thylakoid part 7.0% (7/100) 5.48 0.0 0.0
GO:0009987 cellular process 35.0% (35/100) 1.63 0.0 0.0
GO:0044237 cellular metabolic process 31.0% (31/100) 1.73 0.0 0.0
GO:0005575 cellular_component 28.0% (28/100) 1.74 0.0 0.0
GO:0044267 cellular protein metabolic process 20.0% (20/100) 2.1 0.0 0.0
GO:0010207 photosystem II assembly 3.0% (3/100) 7.38 1e-06 3e-06
GO:0098796 membrane protein complex 7.0% (7/100) 3.65 2e-06 7e-06
GO:0019538 protein metabolic process 20.0% (20/100) 1.73 2e-06 8e-06
GO:1901564 organonitrogen compound metabolic process 22.0% (22/100) 1.61 2e-06 9e-06
GO:0044260 cellular macromolecule metabolic process 20.0% (20/100) 1.65 4e-06 1.9e-05
GO:0008152 metabolic process 33.0% (33/100) 1.1 9e-06 3.6e-05
GO:0019843 rRNA binding 3.0% (3/100) 5.73 2.4e-05 9.8e-05
GO:0006807 nitrogen compound metabolic process 23.0% (23/100) 1.31 3.4e-05 0.000133
GO:0043170 macromolecule metabolic process 21.0% (21/100) 1.32 7.4e-05 0.000282
GO:0008150 biological_process 40.0% (40/100) 0.76 0.000195 0.000732
GO:0003723 RNA binding 6.0% (6/100) 2.8 0.00024 0.00088
GO:0071704 organic substance metabolic process 24.0% (24/100) 1.04 0.000417 0.001496
GO:0034622 cellular protein-containing complex assembly 3.0% (3/100) 4.29 0.000503 0.001767
GO:0006779 porphyrin-containing compound biosynthetic process 2.0% (2/100) 5.7 0.000669 0.002252
GO:0065003 protein-containing complex assembly 3.0% (3/100) 4.15 0.000666 0.002288
GO:0030145 manganese ion binding 2.0% (2/100) 5.61 0.000763 0.002518
GO:0019898 extrinsic component of membrane 2.0% (2/100) 5.22 0.001324 0.004284
GO:0044238 primary metabolic process 22.0% (22/100) 0.98 0.001369 0.004343
GO:0022607 cellular component assembly 3.0% (3/100) 3.75 0.001483 0.004617
GO:0006778 porphyrin-containing compound metabolic process 2.0% (2/100) 5.08 0.00159 0.004858
GO:0043933 protein-containing complex subunit organization 3.0% (3/100) 3.7 0.001635 0.004904
GO:0033014 tetrapyrrole biosynthetic process 2.0% (2/100) 4.91 0.002032 0.005988
GO:0046406 magnesium protoporphyrin IX methyltransferase activity 1.0% (1/100) 8.61 0.002564 0.007294
GO:0015995 chlorophyll biosynthetic process 1.0% (1/100) 8.61 0.002564 0.007294
GO:0009654 photosystem II oxygen evolving complex 2.0% (2/100) 4.7 0.002702 0.007556
GO:0033013 tetrapyrrole metabolic process 2.0% (2/100) 4.52 0.003461 0.009519
GO:0003690 double-stranded DNA binding 2.0% (2/100) 4.4 0.004089 0.01106
GO:1990204 oxidoreductase complex 2.0% (2/100) 4.36 0.004309 0.011467
GO:0015994 chlorophyll metabolic process 1.0% (1/100) 7.61 0.005122 0.013414
GO:0004853 uroporphyrinogen decarboxylase activity 1.0% (1/100) 5.8 0.017813 0.045217
GO:0044425 membrane part 7.0% (7/100) 1.4 0.017543 0.045229
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_16 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_30 0.182 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_131 0.03 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_140 0.082 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_206 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_238 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_245 0.039 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_265 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_266 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_86 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_171 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_4 0.025 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_8 0.136 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_9 0.066 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_61 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.094 Gene family Compare
Oryza sativa HCCA cluster Cluster_21 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_170 0.089 Gene family Compare
Oryza sativa HCCA cluster Cluster_223 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_226 0.052 Gene family Compare
Oryza sativa HCCA cluster Cluster_250 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_270 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_299 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_302 0.036 Gene family Compare
Picea abies HCCA cluster Cluster_186 0.06 Gene family Compare
Picea abies HCCA cluster Cluster_205 0.032 Gene family Compare
Picea abies HCCA cluster Cluster_332 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_373 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_414 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_427 0.034 Gene family Compare
Picea abies HCCA cluster Cluster_476 0.032 Gene family Compare
Picea abies HCCA cluster Cluster_478 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_492 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_11 0.059 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_155 0.042 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_48 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_92 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_123 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_141 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_149 0.149 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_184 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_195 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_206 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_214 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_234 0.09 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_291 0.028 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_307 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_38 0.031 Gene family Compare
Vitis vinifera HCCA cluster Cluster_55 0.077 Gene family Compare
Vitis vinifera HCCA cluster Cluster_81 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_95 0.034 Gene family Compare
Vitis vinifera HCCA cluster Cluster_120 0.049 Gene family Compare
Vitis vinifera HCCA cluster Cluster_200 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_203 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_211 0.12 Gene family Compare
Zea mays HCCA cluster Cluster_176 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_258 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_275 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_319 0.014 Gene family Compare
Sequences (100) (download table)

InterPro Domains

GO Terms

Family Terms