Coexpression cluster: Cluster_54 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005840 ribosome 49.18% (60/122) 5.81 0.0 0.0
GO:0043226 organelle 50.0% (61/122) 4.61 0.0 0.0
GO:0043228 non-membrane-bounded organelle 49.18% (60/122) 5.67 0.0 0.0
GO:0043229 intracellular organelle 50.0% (61/122) 4.61 0.0 0.0
GO:0043603 cellular amide metabolic process 49.18% (60/122) 5.59 0.0 0.0
GO:0043604 amide biosynthetic process 49.18% (60/122) 5.67 0.0 0.0
GO:0044464 cell part 53.28% (65/122) 3.67 0.0 0.0
GO:0044444 cytoplasmic part 50.0% (61/122) 4.87 0.0 0.0
GO:0044424 intracellular part 52.46% (64/122) 3.74 0.0 0.0
GO:0043043 peptide biosynthetic process 49.18% (60/122) 5.74 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 49.18% (60/122) 5.13 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 51.64% (63/122) 3.78 0.0 0.0
GO:0005622 intracellular 32.79% (40/122) 5.74 0.0 0.0
GO:0005198 structural molecule activity 49.18% (60/122) 5.64 0.0 0.0
GO:0003735 structural constituent of ribosome 49.18% (60/122) 5.76 0.0 0.0
GO:1990904 ribonucleoprotein complex 50.0% (61/122) 5.59 0.0 0.0
GO:0044249 cellular biosynthetic process 49.18% (60/122) 4.22 0.0 0.0
GO:0009058 biosynthetic process 49.18% (60/122) 3.99 0.0 0.0
GO:0009059 macromolecule biosynthetic process 49.18% (60/122) 5.0 0.0 0.0
GO:0006412 translation 49.18% (60/122) 5.78 0.0 0.0
GO:0044267 cellular protein metabolic process 49.18% (60/122) 3.4 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 49.18% (60/122) 4.77 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 49.18% (60/122) 5.67 0.0 0.0
GO:0006518 peptide metabolic process 49.18% (60/122) 5.67 0.0 0.0
GO:1901576 organic substance biosynthetic process 49.18% (60/122) 4.13 0.0 0.0
GO:0032991 protein-containing complex 52.46% (64/122) 4.3 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 49.18% (60/122) 4.95 0.0 0.0
GO:0019538 protein metabolic process 49.18% (60/122) 3.03 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 50.0% (61/122) 2.97 0.0 0.0
GO:0005575 cellular_component 54.1% (66/122) 2.69 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 49.18% (60/122) 2.77 0.0 0.0
GO:0043170 macromolecule metabolic process 51.64% (63/122) 2.62 0.0 0.0
GO:0006807 nitrogen compound metabolic process 51.64% (63/122) 2.48 0.0 0.0
GO:0044237 cellular metabolic process 51.64% (63/122) 2.47 0.0 0.0
GO:0009987 cellular process 54.92% (67/122) 2.28 0.0 0.0
GO:0044238 primary metabolic process 51.64% (63/122) 2.21 0.0 0.0
GO:0071704 organic substance metabolic process 51.64% (63/122) 2.15 0.0 0.0
GO:0008152 metabolic process 51.64% (63/122) 1.75 0.0 0.0
GO:0008150 biological_process 55.74% (68/122) 1.24 0.0 0.0
GO:0003674 molecular_function 56.56% (69/122) 0.63 5e-06 1.8e-05
GO:0003723 RNA binding 6.56% (8/122) 2.92 1.2e-05 4.1e-05
GO:0019843 rRNA binding 2.46% (3/122) 5.45 4.4e-05 0.000152
GO:0008097 5S rRNA binding 1.64% (2/122) 7.0 9.6e-05 0.000325
GO:0043461 proton-transporting ATP synthase complex assembly 0.82% (1/122) 8.32 0.003128 0.010309
GO:0032299 ribonuclease H2 complex 0.82% (1/122) 7.32 0.006247 0.020128
GO:0070071 proton-transporting two-sector ATPase complex assembly 0.82% (1/122) 6.32 0.012455 0.039259
GO:0006457 protein folding 1.64% (2/122) 3.54 0.012936 0.039907
GO:0000152 nuclear ubiquitin ligase complex 0.82% (1/122) 6.0 0.015544 0.044194
GO:0005680 anaphase-promoting complex 0.82% (1/122) 6.0 0.015544 0.044194
GO:0031461 cullin-RING ubiquitin ligase complex 0.82% (1/122) 6.0 0.015544 0.044194
GO:0034622 cellular protein-containing complex assembly 1.64% (2/122) 3.41 0.015263 0.046106
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_61 0.03 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.348 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_133 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.052 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_211 0.167 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_237 0.029 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_43 0.378 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_81 0.03 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_128 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_27 0.409 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_60 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_87 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_101 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.288 Gene family Compare
Oryza sativa HCCA cluster Cluster_119 0.056 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_167 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.038 Gene family Compare
Picea abies HCCA cluster Cluster_5 0.04 Gene family Compare
Picea abies HCCA cluster Cluster_63 0.075 Gene family Compare
Picea abies HCCA cluster Cluster_76 0.05 Gene family Compare
Picea abies HCCA cluster Cluster_93 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_189 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_203 0.041 Gene family Compare
Picea abies HCCA cluster Cluster_239 0.11 Gene family Compare
Picea abies HCCA cluster Cluster_258 0.037 Gene family Compare
Picea abies HCCA cluster Cluster_276 0.074 Gene family Compare
Picea abies HCCA cluster Cluster_318 0.024 Gene family Compare
Picea abies HCCA cluster Cluster_382 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_425 0.036 Gene family Compare
Picea abies HCCA cluster Cluster_429 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_441 0.031 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_21 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_67 0.093 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_109 0.122 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_110 0.022 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_152 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_13 0.027 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.315 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_100 0.075 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.037 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_240 0.039 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.029 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_304 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_26 0.058 Gene family Compare
Vitis vinifera HCCA cluster Cluster_32 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.073 Gene family Compare
Vitis vinifera HCCA cluster Cluster_47 0.036 Gene family Compare
Vitis vinifera HCCA cluster Cluster_61 0.238 Gene family Compare
Vitis vinifera HCCA cluster Cluster_77 0.073 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_91 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_116 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_155 0.239 Gene family Compare
Vitis vinifera HCCA cluster Cluster_207 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_43 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_140 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.042 Gene family Compare
Zea mays HCCA cluster Cluster_182 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_203 0.16 Gene family Compare
Zea mays HCCA cluster Cluster_213 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.076 Gene family Compare
Zea mays HCCA cluster Cluster_274 0.052 Gene family Compare
Zea mays HCCA cluster Cluster_294 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_345 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_346 0.024 Gene family Compare
Sequences (122) (download table)

InterPro Domains

GO Terms

Family Terms