Coexpression cluster: Cluster_344 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044422 organelle part 14.0% (7/50) 3.7 1e-06 0.000151
GO:0044446 intracellular organelle part 14.0% (7/50) 3.7 1e-06 0.000151
GO:0006357 regulation of transcription by RNA polymerase II 6.0% (3/50) 6.87 2e-06 0.00016
GO:0016592 mediator complex 6.0% (3/50) 6.87 2e-06 0.00016
GO:0032991 protein-containing complex 18.0% (9/50) 2.75 6e-06 0.000355
GO:0003712 transcription coregulator activity 6.0% (3/50) 6.29 8e-06 0.000376
GO:0044464 cell part 20.0% (10/50) 2.25 3.6e-05 0.00149
GO:0044451 nucleoplasm part 6.0% (3/50) 5.38 5.2e-05 0.001879
GO:0044424 intracellular part 18.0% (9/50) 2.2 0.000127 0.004056
GO:0019001 guanyl nucleotide binding 8.0% (4/50) 3.71 0.00025 0.004482
GO:0001883 purine nucleoside binding 8.0% (4/50) 3.74 0.000234 0.004482
GO:0005525 GTP binding 8.0% (4/50) 3.74 0.000234 0.004482
GO:0001882 nucleoside binding 8.0% (4/50) 3.74 0.000234 0.004482
GO:0032550 purine ribonucleoside binding 8.0% (4/50) 3.74 0.000234 0.004482
GO:0032549 ribonucleoside binding 8.0% (4/50) 3.74 0.000234 0.004482
GO:0032561 guanyl ribonucleotide binding 8.0% (4/50) 3.74 0.000234 0.004482
GO:0098800 inner mitochondrial membrane protein complex 4.0% (2/50) 6.36 0.000272 0.004586
GO:0051603 proteolysis involved in cellular protein catabolic process 6.0% (3/50) 4.52 0.000311 0.004703
GO:0044455 mitochondrial membrane part 4.0% (2/50) 6.29 0.000302 0.004808
GO:0098798 mitochondrial protein complex 4.0% (2/50) 6.15 0.000366 0.005253
GO:0044428 nuclear part 6.0% (3/50) 4.35 0.000442 0.006047
GO:0005575 cellular_component 24.0% (12/50) 1.51 0.000715 0.009324
GO:0070003 threonine-type peptidase activity 4.0% (2/50) 5.44 0.000987 0.01133
GO:0005839 proteasome core complex 4.0% (2/50) 5.44 0.000987 0.01133
GO:0004298 threonine-type endopeptidase activity 4.0% (2/50) 5.44 0.000987 0.01133
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 4.0% (2/50) 5.4 0.001042 0.011507
GO:0030041 actin filament polymerization 2.0% (1/50) 9.61 0.001282 0.011869
GO:0051258 protein polymerization 2.0% (1/50) 9.61 0.001282 0.011869
GO:0008154 actin polymerization or depolymerization 2.0% (1/50) 9.61 0.001282 0.011869
GO:0046907 intracellular transport 6.0% (3/50) 3.86 0.001174 0.012031
GO:0051649 establishment of localization in cell 6.0% (3/50) 3.86 0.001174 0.012031
GO:0051641 cellular localization 6.0% (3/50) 3.72 0.001565 0.014036
GO:0005747 mitochondrial respiratory chain complex I 2.0% (1/50) 8.61 0.002562 0.018857
GO:0045271 respiratory chain complex I 2.0% (1/50) 8.61 0.002562 0.018857
GO:0016125 sterol metabolic process 2.0% (1/50) 8.61 0.002562 0.018857
GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds 2.0% (1/50) 8.61 0.002562 0.018857
GO:0030964 NADH dehydrogenase complex 2.0% (1/50) 8.61 0.002562 0.018857
GO:0047750 cholestenol delta-isomerase activity 2.0% (1/50) 8.61 0.002562 0.018857
GO:0098796 membrane protein complex 6.0% (3/50) 3.43 0.002746 0.019706
GO:0044429 mitochondrial part 4.0% (2/50) 4.8 0.002373 0.020641
GO:0007030 Golgi organization 2.0% (1/50) 8.02 0.003841 0.026889
GO:0015629 actin cytoskeleton 2.0% (1/50) 7.61 0.005119 0.034977
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 2.0% (1/50) 7.29 0.006394 0.042677
GO:0030130 clathrin coat of trans-Golgi network vesicle 2.0% (1/50) 7.02 0.007668 0.045849
GO:0030125 clathrin vesicle coat 2.0% (1/50) 7.02 0.007668 0.045849
GO:0030118 clathrin coat 2.0% (1/50) 7.02 0.007668 0.045849
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 2.0% (1/50) 7.02 0.007668 0.045849
GO:0030132 clathrin coat of coated pit 2.0% (1/50) 7.02 0.007668 0.045849
GO:0031334 positive regulation of protein complex assembly 2.0% (1/50) 6.61 0.010211 0.048044
GO:0051495 positive regulation of cytoskeleton organization 2.0% (1/50) 6.61 0.010211 0.048044
GO:0005885 Arp2/3 protein complex 2.0% (1/50) 6.61 0.010211 0.048044
GO:0010638 positive regulation of organelle organization 2.0% (1/50) 6.61 0.010211 0.048044
GO:0022904 respiratory electron transport chain 2.0% (1/50) 6.61 0.010211 0.048044
GO:0030838 positive regulation of actin filament polymerization 2.0% (1/50) 6.61 0.010211 0.048044
GO:0032273 positive regulation of protein polymerization 2.0% (1/50) 6.61 0.010211 0.048044
GO:1902905 positive regulation of supramolecular fiber organization 2.0% (1/50) 6.61 0.010211 0.048044
GO:0034314 Arp2/3 complex-mediated actin nucleation 2.0% (1/50) 6.61 0.010211 0.048044
GO:0007015 actin filament organization 2.0% (1/50) 6.61 0.010211 0.048044
GO:0044089 positive regulation of cellular component biogenesis 2.0% (1/50) 6.61 0.010211 0.048044
GO:0097435 supramolecular fiber organization 2.0% (1/50) 6.61 0.010211 0.048044
GO:0045010 actin nucleation 2.0% (1/50) 6.61 0.010211 0.048044
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_26 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_38 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_40 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_77 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_126 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_137 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_146 0.035 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_152 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_153 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_163 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_185 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_202 0.022 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_213 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_225 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_237 0.029 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_248 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_275 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_31 0.028 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_40 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_60 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_68 0.028 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_124 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_127 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_3 0.025 Gene family Compare
Oryza sativa HCCA cluster Cluster_46 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_73 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_103 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_196 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_228 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_234 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_242 0.025 Gene family Compare
Oryza sativa HCCA cluster Cluster_264 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_266 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_175 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_185 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_265 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_376 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_398 0.026 Gene family Compare
Picea abies HCCA cluster Cluster_599 0.023 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_7 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_20 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_161 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_39 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_62 0.022 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_100 0.028 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_122 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_131 0.047 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_148 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_288 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_26 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_32 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_102 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_127 0.038 Gene family Compare
Vitis vinifera HCCA cluster Cluster_133 0.036 Gene family Compare
Vitis vinifera HCCA cluster Cluster_154 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_197 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_234 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_78 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_112 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_224 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_264 0.031 Gene family Compare
Zea mays HCCA cluster Cluster_278 0.019 Gene family Compare
Sequences (50) (download table)

InterPro Domains

GO Terms

Family Terms