Coexpression cluster: Cluster_38 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.95% (5/101) 4.83 1e-06 4e-05
GO:0004812 aminoacyl-tRNA ligase activity 4.95% (5/101) 4.83 1e-06 4e-05
GO:0043038 amino acid activation 4.95% (5/101) 4.86 1e-06 7.1e-05
GO:0043039 tRNA aminoacylation 4.95% (5/101) 4.86 1e-06 7.1e-05
GO:0140101 catalytic activity, acting on a tRNA 4.95% (5/101) 4.26 7e-06 0.000238
GO:0000774 adenyl-nucleotide exchange factor activity 1.98% (2/101) 7.93 1.7e-05 0.000379
GO:0042803 protein homodimerization activity 1.98% (2/101) 7.93 1.7e-05 0.000379
GO:0006418 tRNA aminoacylation for protein translation 3.96% (4/101) 4.65 1.9e-05 0.000394
GO:0006399 tRNA metabolic process 4.95% (5/101) 4.05 1.3e-05 0.000406
GO:0034660 ncRNA metabolic process 4.95% (5/101) 3.69 4.5e-05 0.000683
GO:0016874 ligase activity 4.95% (5/101) 3.69 4.5e-05 0.000683
GO:0006520 cellular amino acid metabolic process 4.95% (5/101) 3.72 4e-05 0.00074
GO:0030554 adenyl nucleotide binding 11.88% (12/101) 1.96 6e-05 0.000849
GO:0097159 organic cyclic compound binding 17.82% (18/101) 1.46 7.9e-05 0.000902
GO:1901363 heterocyclic compound binding 17.82% (18/101) 1.46 7.9e-05 0.000902
GO:0036094 small molecule binding 13.86% (14/101) 1.74 7.1e-05 0.000924
GO:0008144 drug binding 11.88% (12/101) 1.9 8.7e-05 0.00094
GO:0060590 ATPase regulator activity 1.98% (2/101) 6.93 9.9e-05 0.000951
GO:0051087 chaperone binding 1.98% (2/101) 6.93 9.9e-05 0.000951
GO:0019752 carboxylic acid metabolic process 4.95% (5/101) 3.23 0.000198 0.001808
GO:0006082 organic acid metabolic process 4.95% (5/101) 3.18 0.000235 0.001874
GO:0140098 catalytic activity, acting on RNA 4.95% (5/101) 3.19 0.000227 0.001892
GO:0043436 oxoacid metabolic process 4.95% (5/101) 3.2 0.00022 0.001915
GO:0017076 purine nucleotide binding 11.88% (12/101) 1.73 0.000268 0.002044
GO:0044281 small molecule metabolic process 6.93% (7/101) 2.37 0.000434 0.003179
GO:0043168 anion binding 11.88% (12/101) 1.59 0.000642 0.003918
GO:0000166 nucleotide binding 11.88% (12/101) 1.59 0.000642 0.003918
GO:1901265 nucleoside phosphate binding 11.88% (12/101) 1.59 0.000642 0.003918
GO:0072527 pyrimidine-containing compound metabolic process 1.98% (2/101) 5.76 0.000585 0.003964
GO:0072528 pyrimidine-containing compound biosynthetic process 1.98% (2/101) 5.76 0.000585 0.003964
GO:0042802 identical protein binding 1.98% (2/101) 5.61 0.000729 0.004304
GO:0005524 ATP binding 9.9% (10/101) 1.71 0.000973 0.005563
GO:0032559 adenyl ribonucleotide binding 9.9% (10/101) 1.7 0.001033 0.00573
GO:0060589 nucleoside-triphosphatase regulator activity 1.98% (2/101) 5.13 0.001459 0.007852
GO:0006139 nucleobase-containing compound metabolic process 8.91% (9/101) 1.73 0.001578 0.00825
GO:0006457 protein folding 1.98% (2/101) 4.93 0.001913 0.009727
GO:0046483 heterocycle metabolic process 8.91% (9/101) 1.64 0.002462 0.012176
GO:0006725 cellular aromatic compound metabolic process 8.91% (9/101) 1.63 0.002532 0.012195
GO:1901360 organic cyclic compound metabolic process 8.91% (9/101) 1.61 0.00278 0.012717
GO:0090304 nucleic acid metabolic process 6.93% (7/101) 1.89 0.002874 0.012828
GO:0006426 glycyl-tRNA aminoacylation 0.99% (1/101) 7.93 0.004089 0.012901
GO:0006206 pyrimidine nucleobase metabolic process 0.99% (1/101) 7.93 0.004089 0.012901
GO:0004820 glycine-tRNA ligase activity 0.99% (1/101) 7.93 0.004089 0.012901
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process 0.99% (1/101) 7.93 0.004089 0.012901
GO:0004590 orotidine-5'-phosphate decarboxylase activity 0.99% (1/101) 7.93 0.004089 0.012901
GO:0009967 positive regulation of signal transduction 0.99% (1/101) 7.93 0.004089 0.012901
GO:0008593 regulation of Notch signaling pathway 0.99% (1/101) 7.93 0.004089 0.012901
GO:0023056 positive regulation of signaling 0.99% (1/101) 7.93 0.004089 0.012901
GO:0019856 pyrimidine nucleobase biosynthetic process 0.99% (1/101) 7.93 0.004089 0.012901
GO:0010647 positive regulation of cell communication 0.99% (1/101) 7.93 0.004089 0.012901
GO:0048584 positive regulation of response to stimulus 0.99% (1/101) 7.93 0.004089 0.012901
GO:0045747 positive regulation of Notch signaling pathway 0.99% (1/101) 7.93 0.004089 0.012901
GO:0016070 RNA metabolic process 4.95% (5/101) 2.39 0.002769 0.012994
GO:0035639 purine ribonucleoside triphosphate binding 9.9% (10/101) 1.48 0.003105 0.013529
GO:0032555 purine ribonucleotide binding 9.9% (10/101) 1.47 0.003259 0.013871
GO:0005488 binding 22.77% (23/101) 0.8 0.005017 0.015561
GO:0046983 protein dimerization activity 1.98% (2/101) 4.41 0.00396 0.015753
GO:0032553 ribonucleotide binding 9.9% (10/101) 1.44 0.003789 0.015761
GO:0097367 carbohydrate derivative binding 9.9% (10/101) 1.44 0.003879 0.015775
GO:0034641 cellular nitrogen compound metabolic process 8.91% (9/101) 1.45 0.005653 0.017241
GO:0070279 vitamin B6 binding 1.98% (2/101) 4.03 0.006683 0.019725
GO:0030170 pyridoxal phosphate binding 1.98% (2/101) 4.03 0.006683 0.019725
GO:0030234 enzyme regulator activity 1.98% (2/101) 3.93 0.00758 0.022017
GO:0016972 thiol oxidase activity 0.99% (1/101) 6.93 0.008161 0.022628
GO:0046112 nucleobase biosynthetic process 0.99% (1/101) 6.93 0.008161 0.022628
GO:0009112 nucleobase metabolic process 0.99% (1/101) 6.93 0.008161 0.022628
GO:0098772 molecular function regulator 1.98% (2/101) 3.76 0.009526 0.026019
GO:0043167 ion binding 11.88% (12/101) 1.1 0.009792 0.026352
GO:0019842 vitamin binding 1.98% (2/101) 3.65 0.011116 0.029481
GO:0006221 pyrimidine nucleotide biosynthetic process 0.99% (1/101) 6.35 0.012217 0.030211
GO:0006220 pyrimidine nucleotide metabolic process 0.99% (1/101) 6.35 0.012217 0.030211
GO:0008079 translation termination factor activity 0.99% (1/101) 6.35 0.012217 0.030211
GO:0003747 translation release factor activity 0.99% (1/101) 6.35 0.012217 0.030211
GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor 0.99% (1/101) 6.35 0.012217 0.030211
GO:0016887 ATPase activity 2.97% (3/101) 2.64 0.012613 0.030775
GO:0050662 coenzyme binding 2.97% (3/101) 2.62 0.012901 0.031065
GO:0022411 cellular component disassembly 0.99% (1/101) 5.61 0.020279 0.045815
GO:0006415 translational termination 0.99% (1/101) 5.61 0.020279 0.045815
GO:0032984 protein-containing complex disassembly 0.99% (1/101) 5.61 0.020279 0.045815
GO:0000049 tRNA binding 0.99% (1/101) 5.61 0.020279 0.045815
GO:0043624 cellular protein complex disassembly 0.99% (1/101) 5.61 0.020279 0.045815
GO:0008152 metabolic process 14.85% (15/101) 0.82 0.021435 0.047836
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_71 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_194 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_265 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_276 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_40 0.02 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_84 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_223 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_92 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_234 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_53 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_95 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_148 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_175 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_111 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_233 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_246 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_321 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_345 0.014 Gene family Compare
Sequences (101) (download table)

InterPro Domains

GO Terms

Family Terms