Coexpression cluster: Cluster_209 (HCCA cluster)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003697 single-stranded DNA binding 2.82% (2/71) 6.52 0.000213 0.005968
GO:0008173 RNA methyltransferase activity 2.82% (2/71) 6.4 0.000252 0.006038
GO:0140098 catalytic activity, acting on RNA 7.04% (5/71) 3.74 3.8e-05 0.006306
GO:0043038 amino acid activation 4.23% (3/71) 4.76 0.000193 0.006481
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.23% (3/71) 4.76 0.000193 0.006481
GO:0004812 aminoacyl-tRNA ligase activity 4.23% (3/71) 4.76 0.000193 0.006481
GO:0043039 tRNA aminoacylation 4.23% (3/71) 4.76 0.000193 0.006481
GO:0140101 catalytic activity, acting on a tRNA 4.23% (3/71) 4.28 0.000513 0.010775
GO:0008168 methyltransferase activity 5.63% (4/71) 3.38 0.000609 0.011374
GO:0016741 transferase activity, transferring one-carbon groups 5.63% (4/71) 3.25 0.000854 0.013041
GO:0006399 tRNA metabolic process 4.23% (3/71) 4.06 0.0008 0.013442
GO:0016070 RNA metabolic process 7.04% (5/71) 2.71 0.001028 0.014391
GO:0006282 regulation of DNA repair 1.41% (1/71) 9.1 0.001821 0.015292
GO:0005795 Golgi stack 1.41% (1/71) 9.1 0.001821 0.015292
GO:0031984 organelle subcompartment 1.41% (1/71) 9.1 0.001821 0.015292
GO:2001020 regulation of response to DNA damage stimulus 1.41% (1/71) 9.1 0.001821 0.015292
GO:0080135 regulation of cellular response to stress 1.41% (1/71) 9.1 0.001821 0.015292
GO:0098791 Golgi subcompartment 1.41% (1/71) 9.1 0.001821 0.015292
GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity 1.41% (1/71) 9.1 0.001821 0.015292
GO:0034660 ncRNA metabolic process 4.23% (3/71) 3.57 0.002121 0.016969
GO:0016874 ligase activity 4.23% (3/71) 3.66 0.001753 0.022653
GO:0008270 zinc ion binding 5.63% (4/71) 2.65 0.003901 0.025208
GO:0090304 nucleic acid metabolic process 8.45% (6/71) 2.04 0.003402 0.025982
GO:0046483 heterocycle metabolic process 9.86% (7/71) 1.82 0.003713 0.025988
GO:0006725 cellular aromatic compound metabolic process 9.86% (7/71) 1.8 0.003883 0.02609
GO:1901360 organic cyclic compound metabolic process 9.86% (7/71) 1.78 0.004302 0.026768
GO:0006520 cellular amino acid metabolic process 4.23% (3/71) 3.29 0.003681 0.026889
GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity 1.41% (1/71) 7.52 0.005452 0.03271
GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives 1.41% (1/71) 7.1 0.007262 0.039358
GO:0080134 regulation of response to stress 1.41% (1/71) 7.1 0.007262 0.039358
GO:0036361 racemase activity, acting on amino acids and derivatives 1.41% (1/71) 7.1 0.007262 0.039358
GO:0051052 regulation of DNA metabolic process 1.41% (1/71) 6.78 0.00907 0.047617
GO:0006139 nucleobase-containing compound metabolic process 8.45% (6/71) 1.73 0.009405 0.047881
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_21 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_28 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_39 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_71 0.075 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_140 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_146 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_163 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_185 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_206 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_214 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_236 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_245 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_265 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_269 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_71 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_8 0.022 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_9 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.024 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_144 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.08 Gene family Compare
Oryza sativa HCCA cluster Cluster_45 0.036 Gene family Compare
Oryza sativa HCCA cluster Cluster_80 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_161 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_170 0.036 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_226 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_279 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_288 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_291 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_335 0.027 Gene family Compare
Picea abies HCCA cluster Cluster_36 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_73 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_275 0.029 Gene family Compare
Picea abies HCCA cluster Cluster_345 0.026 Gene family Compare
Picea abies HCCA cluster Cluster_346 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_428 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_456 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_458 0.029 Gene family Compare
Picea abies HCCA cluster Cluster_488 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_492 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_630 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_885 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_911 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_43 0.035 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_64 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_110 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_138 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_165 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_166 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_183 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_185 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_15 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_17 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_55 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_85 0.07 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_99 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_122 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_127 0.029 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_141 0.038 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_145 0.028 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_166 0.041 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_183 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_206 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_211 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_234 0.035 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_245 0.035 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.042 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_302 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_2 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_58 0.029 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_104 0.039 Gene family Compare
Vitis vinifera HCCA cluster Cluster_120 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_121 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_148 0.036 Gene family Compare
Vitis vinifera HCCA cluster Cluster_182 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_211 0.035 Gene family Compare
Vitis vinifera HCCA cluster Cluster_212 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_226 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_53 0.045 Gene family Compare
Zea mays HCCA cluster Cluster_101 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_173 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_259 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_354 0.016 Gene family Compare
Sequences (71) (download table)

InterPro Domains

GO Terms

Family Terms