Coexpression cluster: Cluster_122 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044391 ribosomal subunit 30.61% (15/49) 4.86 0.0 0.0
GO:0032991 protein-containing complex 46.94% (23/49) 3.26 0.0 0.0
GO:1990904 ribonucleoprotein complex 30.61% (15/49) 4.61 0.0 0.0
GO:0003735 structural constituent of ribosome 30.61% (15/49) 4.56 0.0 0.0
GO:0043043 peptide biosynthetic process 30.61% (15/49) 4.52 0.0 0.0
GO:0006412 translation 30.61% (15/49) 4.54 0.0 0.0
GO:0006518 peptide metabolic process 30.61% (15/49) 4.47 0.0 0.0
GO:0043604 amide biosynthetic process 30.61% (15/49) 4.43 0.0 0.0
GO:0005198 structural molecule activity 30.61% (15/49) 4.22 0.0 0.0
GO:0043603 amide metabolic process 30.61% (15/49) 4.11 0.0 0.0
GO:0005840 ribosome 26.53% (13/49) 4.47 0.0 0.0
GO:0022627 cytosolic small ribosomal subunit 18.37% (9/49) 5.61 0.0 0.0
GO:0015935 small ribosomal subunit 18.37% (9/49) 5.27 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 30.61% (15/49) 3.3 0.0 0.0
GO:0009059 macromolecule biosynthetic process 32.65% (16/49) 2.9 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 32.65% (16/49) 2.89 0.0 0.0
GO:0043228 non-membrane-bounded organelle 28.57% (14/49) 3.0 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 28.57% (14/49) 3.0 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 30.61% (15/49) 2.68 0.0 0.0
GO:0045275 respiratory chain complex III 8.16% (4/49) 6.97 0.0 0.0
GO:0005750 mitochondrial respiratory chain complex III 8.16% (4/49) 6.97 0.0 0.0
GO:0098803 respiratory chain complex 12.24% (6/49) 4.98 0.0 0.0
GO:0006407 rRNA export from nucleus 6.12% (3/49) 8.4 0.0 1e-06
GO:0051029 rRNA transport 6.12% (3/49) 8.4 0.0 1e-06
GO:1990204 oxidoreductase complex 12.24% (6/49) 4.74 0.0 1e-06
GO:0070069 cytochrome complex 8.16% (4/49) 6.39 0.0 2e-06
GO:0097064 ncRNA export from nucleus 6.12% (3/49) 7.92 0.0 2e-06
GO:0098800 inner mitochondrial membrane protein complex 12.24% (6/49) 4.6 0.0 2e-06
GO:0098798 mitochondrial protein-containing complex 12.24% (6/49) 4.45 0.0 3e-06
GO:0015934 large ribosomal subunit 12.24% (6/49) 4.4 0.0 4e-06
GO:1990351 transporter complex 10.2% (5/49) 4.89 1e-06 7e-06
GO:1902495 transmembrane transporter complex 10.2% (5/49) 4.89 1e-06 7e-06
GO:0044260 cellular macromolecule metabolic process 32.65% (16/49) 1.98 1e-06 1e-05
GO:0044249 cellular biosynthetic process 36.73% (18/49) 1.66 4e-06 4e-05
GO:0019538 protein metabolic process 32.65% (16/49) 1.81 5e-06 4.3e-05
GO:0009853 photorespiration 10.2% (5/49) 4.15 9e-06 7.4e-05
GO:1902494 catalytic complex 16.33% (8/49) 2.93 9e-06 7.5e-05
GO:0034641 cellular nitrogen compound metabolic process 34.69% (17/49) 1.64 1.2e-05 9.1e-05
GO:0043094 cellular metabolic compound salvage 10.2% (5/49) 3.96 1.7e-05 0.000132
GO:1901576 organic substance biosynthetic process 36.73% (18/49) 1.49 2.5e-05 0.000184
GO:0042254 ribosome biogenesis 8.16% (4/49) 4.43 3.6e-05 0.000267
GO:0098796 membrane protein complex 12.24% (6/49) 3.22 4.3e-05 0.000309
GO:0009058 biosynthetic process 36.73% (18/49) 1.42 4.6e-05 0.000314
GO:0022613 ribonucleoprotein complex biogenesis 8.16% (4/49) 4.35 4.5e-05 0.000316
GO:0015453 oxidoreduction-driven active transmembrane transporter activity 6.12% (3/49) 5.4 4.9e-05 0.000329
GO:0022625 cytosolic large ribosomal subunit 8.16% (4/49) 4.22 6.3e-05 0.000414
GO:0005739 mitochondrion 32.65% (16/49) 1.45 0.000111 0.00071
GO:0003674 molecular_function 93.88% (46/49) 0.37 0.000186 0.001161
GO:0001510 RNA methylation 8.16% (4/49) 3.71 0.000246 0.001393
GO:0050657 nucleic acid transport 6.12% (3/49) 4.64 0.000242 0.001394
GO:0006405 RNA export from nucleus 6.12% (3/49) 4.64 0.000242 0.001394
GO:0051236 establishment of RNA localization 6.12% (3/49) 4.64 0.000242 0.001394
GO:0050658 RNA transport 6.12% (3/49) 4.64 0.000242 0.001394
GO:0004129 cytochrome-c oxidase activity 4.08% (2/49) 6.33 0.000276 0.001479
GO:0016675 oxidoreductase activity, acting on a heme group of donors 4.08% (2/49) 6.33 0.000276 0.001479
GO:0051168 nuclear export 6.12% (3/49) 4.58 0.000274 0.001525
GO:0044237 cellular metabolic process 46.94% (23/49) 0.98 0.000339 0.001786
GO:0043170 macromolecule metabolic process 36.73% (18/49) 1.17 0.000448 0.002319
GO:0005753 mitochondrial proton-transporting ATP synthase complex 4.08% (2/49) 5.75 0.000632 0.003214
GO:0009055 electron transfer activity 6.12% (3/49) 4.1 0.000727 0.003637
GO:0045259 proton-transporting ATP synthase complex 4.08% (2/49) 5.62 0.00076 0.003737
GO:0016469 proton-transporting two-sector ATPase complex 4.08% (2/49) 5.56 0.000828 0.004006
GO:1901564 organonitrogen compound metabolic process 32.65% (16/49) 1.2 0.000856 0.004076
GO:1904949 ATPase complex 4.08% (2/49) 5.33 0.001129 0.005291
GO:0015931 nucleobase-containing compound transport 6.12% (3/49) 3.76 0.001427 0.006586
GO:0044085 cellular component biogenesis 8.16% (4/49) 2.94 0.001843 0.008376
GO:0008152 metabolic process 48.98% (24/49) 0.78 0.00189 0.008463
GO:0006807 nitrogen compound metabolic process 36.73% (18/49) 0.99 0.002075 0.009156
GO:0006913 nucleocytoplasmic transport 6.12% (3/49) 3.52 0.002311 0.009903
GO:0051169 nuclear transport 6.12% (3/49) 3.52 0.002311 0.009903
GO:0009451 RNA modification 8.16% (4/49) 2.8 0.002616 0.011056
GO:0044238 primary metabolic process 40.82% (20/49) 0.82 0.004456 0.018565
GO:0015078 proton transmembrane transporter activity 6.12% (3/49) 2.98 0.006563 0.02697
GO:0015399 primary active transmembrane transporter activity 6.12% (3/49) 2.84 0.008469 0.033874
GO:0022853 active monoatomic ion transmembrane transporter activity 6.12% (3/49) 2.85 0.008371 0.033938
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c 2.04% (1/49) 6.82 0.008828 0.034397
GO:0005680 anaphase-promoting complex 2.04% (1/49) 6.82 0.008828 0.034397
GO:0043226 organelle 77.55% (38/49) 0.35 0.010018 0.038043
GO:0043229 intracellular organelle 77.55% (38/49) 0.35 0.009937 0.038221
GO:0043414 macromolecule methylation 8.16% (4/49) 2.16 0.012179 0.045106
GO:0032259 methylation 8.16% (4/49) 2.16 0.012179 0.045106
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Abrodictyum obscurum HCCA Cluster_5 0.017 OrthoFinder output from all 47 species Compare
Abrodictyum obscurum HCCA Cluster_120 0.015 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_384 0.016 OrthoFinder output from all 47 species Compare
Azolla filiculoides HCCA Cluster_54 0.017 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_162 0.016 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_422 0.024 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_151 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_257 0.017 OrthoFinder output from all 47 species Compare
Cibotium barometz HCCA Cluster_198 0.025 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_52 0.042 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_150 0.038 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_4 0.016 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_72 0.02 OrthoFinder output from all 47 species Compare
Equisetum hyemale HCCA Cluster_42 0.021 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_105 0.052 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_130 0.038 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_105 0.016 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_62 0.081 OrthoFinder output from all 47 species Compare
Marchantia polymorpha HCCA Cluster_73 0.069 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_41 0.015 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_141 0.018 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_14 0.113 OrthoFinder output from all 47 species Compare
Oryza sativa HCCA Cluster_147 0.085 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_110 0.05 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_175 0.036 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_199 0.023 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_73 0.031 OrthoFinder output from all 47 species Compare
Physcomitrella patens HCCA Cluster_108 0.038 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_87 0.02 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_155 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_204 0.015 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_51 0.024 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_67 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_148 0.017 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_35 0.028 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_141 0.242 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_20 0.018 OrthoFinder output from all 47 species Compare
Selaginella moellendorffii HCCA Cluster_49 0.029 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_136 0.016 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_51 0.018 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_50 0.024 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_56 0.033 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_80 0.038 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_104 0.027 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_113 0.028 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_46 0.026 OrthoFinder output from all 47 species Compare
Sequences (49) (download table)

InterPro Domains

GO Terms

Family Terms