Coexpression cluster: Cluster_111 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0044281 small molecule metabolic process 10.1% (10/99) 2.91 1e-06 0.000318
GO:1901360 organic cyclic compound metabolic process 13.13% (13/99) 2.19 5e-06 0.000373
GO:0006520 cellular amino acid metabolic process 6.06% (6/99) 3.81 5e-06 0.000418
GO:0003723 RNA binding 8.08% (8/99) 3.23 2e-06 0.000426
GO:0006418 tRNA aminoacylation for protein translation 4.04% (4/99) 5.01 8e-06 0.000435
GO:0046483 heterocycle metabolic process 13.13% (13/99) 2.23 4e-06 0.000464
GO:0006082 organic acid metabolic process 7.07% (7/99) 3.07 2.2e-05 0.000501
GO:0006725 cellular aromatic compound metabolic process 12.12% (12/99) 2.1 2.3e-05 0.000502
GO:0004812 aminoacyl-tRNA ligase activity 4.04% (4/99) 4.69 1.8e-05 0.000523
GO:0043039 tRNA aminoacylation 4.04% (4/99) 4.69 1.8e-05 0.000523
GO:0043038 amino acid activation 4.04% (4/99) 4.69 1.8e-05 0.000523
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.04% (4/99) 4.69 1.8e-05 0.000523
GO:0043436 oxoacid metabolic process 7.07% (7/99) 3.07 2.1e-05 0.000527
GO:0019752 carboxylic acid metabolic process 7.07% (7/99) 3.08 2.1e-05 0.000556
GO:0016070 RNA metabolic process 8.08% (8/99) 2.91 1.2e-05 0.000606
GO:0140098 catalytic activity, acting on RNA 6.06% (6/99) 3.53 1.5e-05 0.000629
GO:0097159 organic cyclic compound binding 26.26% (26/99) 1.2 3.5e-05 0.000663
GO:1901363 heterocyclic compound binding 26.26% (26/99) 1.2 3.5e-05 0.000663
GO:0006139 nucleobase-containing compound metabolic process 11.11% (11/99) 2.13 4.5e-05 0.000811
GO:0140101 catalytic activity, acting on a tRNA 4.04% (4/99) 4.21 6.8e-05 0.001162
GO:0034641 cellular nitrogen compound metabolic process 13.13% (13/99) 1.8 9e-05 0.001476
GO:0006399 tRNA metabolic process 4.04% (4/99) 3.99 0.000122 0.001828
GO:0005524 ATP binding 13.13% (13/99) 1.76 0.000119 0.001865
GO:0035639 purine ribonucleoside triphosphate binding 14.14% (14/99) 1.66 0.000133 0.001909
GO:0008144 drug binding 13.13% (13/99) 1.66 0.000226 0.003108
GO:0097367 carbohydrate derivative binding 14.14% (14/99) 1.55 0.000283 0.003141
GO:0032553 ribonucleotide binding 14.14% (14/99) 1.56 0.000274 0.003142
GO:0032555 purine ribonucleotide binding 14.14% (14/99) 1.57 0.000257 0.003154
GO:0017076 purine nucleotide binding 14.14% (14/99) 1.56 0.000271 0.003216
GO:0030554 adenyl nucleotide binding 13.13% (13/99) 1.65 0.000253 0.003222
GO:0032559 adenyl ribonucleotide binding 13.13% (13/99) 1.65 0.000244 0.00323
GO:0016741 transferase activity, transferring one-carbon groups 5.05% (5/99) 3.09 0.000318 0.00331
GO:0005488 binding 34.34% (34/99) 0.83 0.000312 0.003353
GO:0016874 ligase activity 4.04% (4/99) 3.6 0.000347 0.003514
GO:0034660 ncRNA metabolic process 4.04% (4/99) 3.5 0.000447 0.004398
GO:0008173 RNA methyltransferase activity 2.02% (2/99) 5.92 0.000489 0.004668
GO:0000166 nucleotide binding 14.14% (14/99) 1.43 0.00067 0.006066
GO:1901265 nucleoside phosphate binding 14.14% (14/99) 1.43 0.00067 0.006066
GO:0043168 anion binding 14.14% (14/99) 1.37 0.000958 0.008447
GO:0090304 nucleic acid metabolic process 8.08% (8/99) 1.98 0.001013 0.008713
GO:0036094 small molecule binding 14.14% (14/99) 1.35 0.001134 0.009518
GO:0003676 nucleic acid binding 13.13% (13/99) 1.38 0.00138 0.011306
GO:0004817 cysteine-tRNA ligase activity 1.01% (1/99) 8.62 0.002538 0.015056
GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity 1.01% (1/99) 8.62 0.002538 0.015056
GO:0004749 ribose phosphate diphosphokinase activity 1.01% (1/99) 8.62 0.002538 0.015056
GO:0004366 glycerol-3-phosphate O-acyltransferase activity 1.01% (1/99) 8.62 0.002538 0.015056
GO:0004529 exodeoxyribonuclease activity 1.01% (1/99) 8.62 0.002538 0.015056
GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 1.01% (1/99) 8.62 0.002538 0.015056
GO:0008409 5'-3' exonuclease activity 1.01% (1/99) 8.62 0.002538 0.015056
GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters 1.01% (1/99) 8.62 0.002538 0.015056
GO:0035312 5'-3' exodeoxyribonuclease activity 1.01% (1/99) 8.62 0.002538 0.015056
GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity 1.01% (1/99) 8.62 0.002538 0.015056
GO:0008297 single-stranded DNA exodeoxyribonuclease activity 1.01% (1/99) 8.62 0.002538 0.015056
GO:0004536 deoxyribonuclease activity 1.01% (1/99) 8.62 0.002538 0.015056
GO:0004832 valine-tRNA ligase activity 1.01% (1/99) 8.62 0.002538 0.015056
GO:0006438 valyl-tRNA aminoacylation 1.01% (1/99) 8.62 0.002538 0.015056
GO:0006423 cysteinyl-tRNA aminoacylation 1.01% (1/99) 8.62 0.002538 0.015056
GO:0008168 methyltransferase activity 4.04% (4/99) 2.9 0.002099 0.01679
GO:0003674 molecular_function 50.51% (50/99) 0.47 0.002968 0.017306
GO:0006807 nitrogen compound metabolic process 18.18% (18/99) 0.97 0.004056 0.022872
GO:0003690 double-stranded DNA binding 2.02% (2/99) 4.41 0.004009 0.022987
GO:0043167 ion binding 17.17% (17/99) 1.01 0.004168 0.023125
GO:0004640 phosphoribosylanthranilate isomerase activity 1.01% (1/99) 7.62 0.005071 0.027254
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 1.01% (1/99) 7.62 0.005071 0.027254
GO:0009117 nucleotide metabolic process 3.03% (3/99) 3.11 0.005201 0.027528
GO:0006753 nucleoside phosphate metabolic process 3.03% (3/99) 3.0 0.006438 0.033557
GO:0006396 RNA processing 3.03% (3/99) 2.92 0.007439 0.038192
GO:0016778 diphosphotransferase activity 1.01% (1/99) 7.04 0.007596 0.038428
GO:0055086 nucleobase-containing small molecule metabolic process 3.03% (3/99) 2.78 0.009702 0.04837
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_3 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_5 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_32 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_66 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_71 0.067 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_88 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_122 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_140 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_149 0.027 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_192 0.058 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_214 0.028 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_238 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_245 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_246 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_248 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_21 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_38 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_61 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_71 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_79 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_106 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_6 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_40 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_66 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_84 0.044 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_86 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_104 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_1 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.061 Gene family Compare
Oryza sativa HCCA cluster Cluster_8 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_21 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_80 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_170 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_223 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_250 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_257 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_287 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_288 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_299 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_324 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_335 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_115 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_186 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_205 0.04 Gene family Compare
Picea abies HCCA cluster Cluster_345 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_403 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_478 0.027 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_13 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_43 0.027 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_101 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_115 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_158 0.025 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_165 0.028 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_15 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_48 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_85 0.055 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_92 0.047 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_96 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_141 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_183 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_206 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_214 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_234 0.046 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_244 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_245 0.042 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_250 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_251 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_2 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_29 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_104 0.032 Gene family Compare
Vitis vinifera HCCA cluster Cluster_120 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_148 0.109 Gene family Compare
Vitis vinifera HCCA cluster Cluster_159 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_179 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_180 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_191 0.024 Gene family Compare
Vitis vinifera HCCA cluster Cluster_195 0.023 Gene family Compare
Vitis vinifera HCCA cluster Cluster_211 0.028 Gene family Compare
Vitis vinifera HCCA cluster Cluster_231 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_16 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_53 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_73 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_103 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_132 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_134 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_163 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_174 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_230 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_233 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_236 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_265 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_297 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_353 0.014 Gene family Compare
Sequences (99) (download table)

InterPro Domains

GO Terms

Family Terms