Coexpression cluster: Cluster_110 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0034660 ncRNA metabolic process 8.2% (5/61) 4.41 4e-06 0.000888
GO:0016070 RNA metabolic process 9.84% (6/61) 3.38 2.4e-05 0.001899
GO:0090304 nucleic acid metabolic process 13.11% (8/61) 2.81 1.7e-05 0.002006
GO:0004812 aminoacyl-tRNA ligase activity 4.92% (3/61) 4.82 0.000165 0.004285
GO:0016875 ligase activity, forming carbon-oxygen bonds 4.92% (3/61) 4.82 0.000165 0.004285
GO:0044237 cellular metabolic process 19.67% (12/61) 1.74 0.000193 0.004516
GO:0006139 nucleobase-containing compound metabolic process 13.11% (8/61) 2.29 0.000215 0.004568
GO:0043039 tRNA aminoacylation 4.92% (3/61) 4.85 0.000154 0.005134
GO:0043038 amino acid activation 4.92% (3/61) 4.85 0.000154 0.005134
GO:0006725 cellular aromatic compound metabolic process 13.11% (8/61) 2.19 0.000344 0.005363
GO:0009987 cellular process 22.95% (14/61) 1.51 0.000279 0.005431
GO:1901360 organic cyclic compound metabolic process 13.11% (8/61) 2.17 0.000377 0.005519
GO:0140098 catalytic activity, acting on RNA 6.56% (4/61) 3.6 0.00034 0.005683
GO:0008152 metabolic process 22.95% (14/61) 1.45 0.000434 0.005969
GO:0046483 heterocycle metabolic process 13.11% (8/61) 2.2 0.000334 0.006016
GO:0044238 primary metabolic process 19.67% (12/61) 1.6 0.000479 0.006233
GO:0043170 macromolecule metabolic process 16.39% (10/61) 1.79 0.000563 0.00659
GO:0140101 catalytic activity, acting on a tRNA 4.92% (3/61) 4.25 0.000536 0.006604
GO:0034641 cellular nitrogen compound metabolic process 14.75% (9/61) 2.18 0.000148 0.006919
GO:0006418 tRNA aminoacylation for protein translation 4.92% (3/61) 4.96 0.000123 0.00719
GO:0071704 organic substance metabolic process 19.67% (12/61) 1.54 0.000694 0.007738
GO:0006399 tRNA metabolic process 4.92% (3/61) 4.04 0.00082 0.00872
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 3.28% (2/61) 5.41 0.000998 0.010157
GO:0006520 cellular amino acid metabolic process 4.92% (3/61) 3.71 0.001588 0.014859
GO:0008150 biological_process 27.87% (17/61) 1.1 0.001551 0.01512
GO:0016874 ligase activity 4.92% (3/61) 3.68 0.001687 0.015187
GO:0070475 rRNA base methylation 1.64% (1/61) 8.66 0.002469 0.016051
GO:0036265 RNA (guanine-N7)-methylation 1.64% (1/61) 8.66 0.002469 0.016051
GO:0070476 rRNA (guanine-N7)-methylation 1.64% (1/61) 8.66 0.002469 0.016051
GO:0034472 snRNA 3'-end processing 1.64% (1/61) 8.66 0.002469 0.016051
GO:0043628 ncRNA 3'-end processing 1.64% (1/61) 8.66 0.002469 0.016051
GO:0004096 catalase activity 1.64% (1/61) 8.66 0.002469 0.016051
GO:0034477 U6 snRNA 3'-end processing 1.64% (1/61) 8.66 0.002469 0.016051
GO:0016073 snRNA metabolic process 1.64% (1/61) 8.66 0.002469 0.016051
GO:0016180 snRNA processing 1.64% (1/61) 8.66 0.002469 0.016051
GO:0006807 nitrogen compound metabolic process 16.39% (10/61) 1.46 0.003114 0.019692
GO:0003824 catalytic activity 22.95% (14/61) 1.19 0.002469 0.021402
GO:0019752 carboxylic acid metabolic process 4.92% (3/61) 3.22 0.004103 0.025265
GO:0043436 oxoacid metabolic process 4.92% (3/61) 3.19 0.004373 0.026238
GO:0006082 organic acid metabolic process 4.92% (3/61) 3.17 0.004559 0.026669
GO:0000154 rRNA modification 1.64% (1/61) 7.66 0.004933 0.026844
GO:0016435 rRNA (guanine) methyltransferase activity 1.64% (1/61) 7.66 0.004933 0.026844
GO:0031167 rRNA methylation 1.64% (1/61) 7.66 0.004933 0.026844
GO:0140102 catalytic activity, acting on a rRNA 1.64% (1/61) 7.08 0.00739 0.037594
GO:0008649 rRNA methyltransferase activity 1.64% (1/61) 7.08 0.00739 0.037594
GO:0031123 RNA 3'-end processing 1.64% (1/61) 7.08 0.00739 0.037594
GO:0034470 ncRNA processing 3.28% (2/61) 3.93 0.007623 0.037954
GO:0042592 homeostatic process 3.28% (2/61) 3.73 0.009997 0.048733
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_33 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_43 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_265 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_23 0.015 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_93 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_135 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_137 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_161 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_199 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_213 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_4 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_35 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_52 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_92 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_152 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_21 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_159 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_195 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_283 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_414 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_439 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_12 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_69 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_125 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_64 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_173 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_251 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_286 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_126 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_70 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_93 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_267 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_376 0.014 Gene family Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms