Coexpression cluster: Cluster_322 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006368 transcription elongation from RNA polymerase II promoter 4.17% (3/72) 8.67 0.0 1e-06
GO:0006354 DNA-templated transcription, elongation 4.17% (3/72) 8.67 0.0 1e-06
GO:0016593 Cdc73/Paf1 complex 4.17% (3/72) 8.67 0.0 1e-06
GO:0008023 transcription elongation factor complex 4.17% (3/72) 8.34 0.0 3e-06
GO:0016570 histone modification 4.17% (3/72) 6.76 3e-06 7.6e-05
GO:0016569 covalent chromatin modification 4.17% (3/72) 6.76 3e-06 7.6e-05
GO:0016070 RNA metabolic process 9.72% (7/72) 3.17 1.3e-05 0.000311
GO:1902554 serine/threonine protein kinase complex 2.78% (2/72) 7.5 5e-05 0.000848
GO:1990316 Atg1/ULK1 kinase complex 2.78% (2/72) 7.5 5e-05 0.000848
GO:1902911 protein kinase complex 2.78% (2/72) 7.5 5e-05 0.000848
GO:0006325 chromatin organization 4.17% (3/72) 5.21 7.6e-05 0.001163
GO:0006914 autophagy 2.78% (2/72) 6.91 0.00012 0.00156
GO:0061919 process utilizing autophagic mechanism 2.78% (2/72) 6.91 0.00012 0.00156
GO:0044451 nucleoplasm part 4.17% (3/72) 4.86 0.000156 0.001882
GO:0043631 RNA polyadenylation 2.78% (2/72) 6.38 0.000259 0.002915
GO:0061695 transferase complex, transferring phosphorus-containing groups 2.78% (2/72) 6.08 0.000397 0.004189
GO:0090304 nucleic acid metabolic process 9.72% (7/72) 2.24 0.000695 0.006913
GO:0044428 nuclear part 4.17% (3/72) 3.82 0.001284 0.01206
GO:0043412 macromolecule modification 12.5% (9/72) 1.71 0.00167 0.014108
GO:0016598 protein arginylation 1.39% (1/72) 9.08 0.001846 0.014182
GO:0004057 arginyltransferase activity 1.39% (1/72) 9.08 0.001846 0.014182
GO:0005515 protein binding 15.28% (11/72) 1.5 0.001606 0.014282
GO:0006139 nucleobase-containing compound metabolic process 9.72% (7/72) 1.93 0.002366 0.017382
GO:0032774 RNA biosynthetic process 4.17% (3/72) 3.49 0.002489 0.017524
GO:0000413 protein peptidyl-prolyl isomerization 2.78% (2/72) 4.66 0.00289 0.018785
GO:0018208 peptidyl-proline modification 2.78% (2/72) 4.66 0.00289 0.018785
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.78% (2/72) 4.56 0.003301 0.019235
GO:0016859 cis-trans isomerase activity 2.78% (2/72) 4.56 0.003301 0.019235
GO:0016853 isomerase activity 4.17% (3/72) 3.34 0.003285 0.02056
GO:0046483 heterocycle metabolic process 9.72% (7/72) 1.8 0.004015 0.022618
GO:0006725 cellular aromatic compound metabolic process 9.72% (7/72) 1.78 0.004198 0.022886
GO:1901360 organic cyclic compound metabolic process 9.72% (7/72) 1.76 0.004649 0.024555
GO:0018193 peptidyl-amino acid modification 2.78% (2/72) 4.2 0.005373 0.025942
GO:0006464 cellular protein modification process 11.11% (8/72) 1.57 0.005361 0.026645
GO:0036211 protein modification process 11.11% (8/72) 1.57 0.005361 0.026645
GO:0005488 binding 31.94% (23/72) 0.72 0.007513 0.028856
GO:0018342 protein prenylation 1.39% (1/72) 7.08 0.007364 0.028944
GO:0004659 prenyltransferase activity 1.39% (1/72) 7.08 0.007364 0.028944
GO:0097354 prenylation 1.39% (1/72) 7.08 0.007364 0.028944
GO:0016755 transferase activity, transferring amino-acyl groups 1.39% (1/72) 7.08 0.007364 0.028944
GO:0008318 protein prenyltransferase activity 1.39% (1/72) 7.08 0.007364 0.028944
GO:0044237 cellular metabolic process 19.44% (14/72) 1.06 0.006311 0.029626
GO:0043170 macromolecule metabolic process 18.06% (13/72) 1.1 0.006538 0.029861
GO:1990234 transferase complex 2.78% (2/72) 3.89 0.008116 0.030481
GO:0044424 intracellular part 11.11% (8/72) 1.5 0.007186 0.031958
GO:0044464 cell part 11.11% (8/72) 1.41 0.010454 0.038408
GO:0004652 polynucleotide adenylyltransferase activity 1.39% (1/72) 6.27 0.012853 0.046215
GO:0034654 nucleobase-containing compound biosynthetic process 4.17% (3/72) 2.61 0.013372 0.04708
GO:0006807 nitrogen compound metabolic process 18.06% (13/72) 0.96 0.014133 0.048743
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_4 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_8 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_9 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_31 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_32 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_33 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_56 0.023 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_70 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_92 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_93 0.032 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_94 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_95 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_101 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_123 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_127 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_135 0.021 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_139 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_159 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_197 0.031 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_205 0.035 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_216 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_224 0.027 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_227 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_234 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_248 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_270 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_272 0.038 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_109 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_129 0.014 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_193 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_91 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_120 0.024 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_125 0.029 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_148 0.021 Gene family Compare
Oryza sativa HCCA cluster Cluster_2 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_26 0.043 Gene family Compare
Oryza sativa HCCA cluster Cluster_53 0.035 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_93 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_99 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_138 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_149 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_151 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_168 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_173 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_175 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_189 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_205 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_248 0.033 Gene family Compare
Oryza sativa HCCA cluster Cluster_263 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_273 0.035 Gene family Compare
Oryza sativa HCCA cluster Cluster_284 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_286 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_297 0.058 Gene family Compare
Oryza sativa HCCA cluster Cluster_303 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_321 0.024 Gene family Compare
Oryza sativa HCCA cluster Cluster_436 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_69 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_172 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_216 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_252 0.024 Gene family Compare
Picea abies HCCA cluster Cluster_295 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_362 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_369 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_397 0.024 Gene family Compare
Picea abies HCCA cluster Cluster_435 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_467 0.022 Gene family Compare
Picea abies HCCA cluster Cluster_486 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_580 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_591 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_911 0.014 Gene family Compare
Picea abies HCCA cluster Cluster_955 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_24 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_91 0.026 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_103 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_124 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_138 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_172 0.026 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_197 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_199 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_30 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_31 0.029 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_37 0.03 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_86 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_135 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_140 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_196 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_211 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_217 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_235 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_254 0.033 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_289 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_293 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_300 0.025 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_306 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_308 0.037 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_309 0.034 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_313 0.027 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_346 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_38 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_46 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_70 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_72 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_103 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_109 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_111 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_121 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_136 0.04 Gene family Compare
Vitis vinifera HCCA cluster Cluster_160 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_170 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_179 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_181 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_189 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_193 0.027 Gene family Compare
Vitis vinifera HCCA cluster Cluster_206 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_213 0.026 Gene family Compare
Vitis vinifera HCCA cluster Cluster_220 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_226 0.026 Gene family Compare
Vitis vinifera HCCA cluster Cluster_228 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_229 0.028 Gene family Compare
Vitis vinifera HCCA cluster Cluster_230 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_232 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_241 0.042 Gene family Compare
Vitis vinifera HCCA cluster Cluster_245 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_8 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_23 0.025 Gene family Compare
Zea mays HCCA cluster Cluster_52 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_57 0.026 Gene family Compare
Zea mays HCCA cluster Cluster_61 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_86 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_87 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_109 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_110 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_137 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_175 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_178 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_200 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_231 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_271 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_272 0.028 Gene family Compare
Zea mays HCCA cluster Cluster_283 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_320 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_323 0.027 Gene family Compare
Zea mays HCCA cluster Cluster_336 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_338 0.018 Gene family Compare
Sequences (72) (download table)

InterPro Domains

GO Terms

Family Terms