Coexpression cluster: Cluster_258 (HCCA cluster)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0033014 tetrapyrrole biosynthetic process 8.0% (4/50) 6.91 0.0 7e-06
GO:0033013 tetrapyrrole metabolic process 8.0% (4/50) 6.52 0.0 7e-06
GO:1901566 organonitrogen compound biosynthetic process 18.0% (9/50) 3.5 0.0 9e-06
GO:0044249 cellular biosynthetic process 20.0% (10/50) 2.92 1e-06 3.2e-05
GO:1901576 organic substance biosynthetic process 20.0% (10/50) 2.84 1e-06 4.3e-05
GO:0009058 biosynthetic process 20.0% (10/50) 2.7 3e-06 8.6e-05
GO:0044271 cellular nitrogen compound biosynthetic process 16.0% (8/50) 3.15 3e-06 8.7e-05
GO:0044237 cellular metabolic process 30.0% (15/50) 1.68 3.3e-05 0.000849
GO:0005840 ribosome 10.0% (5/50) 3.51 7.8e-05 0.001589
GO:0003674 molecular_function 64.0% (32/50) 0.81 7e-05 0.001589
GO:0043232 intracellular non-membrane-bounded organelle 10.0% (5/50) 3.37 0.000122 0.002061
GO:0043228 non-membrane-bounded organelle 10.0% (5/50) 3.37 0.000122 0.002061
GO:1990904 ribonucleoprotein complex 10.0% (5/50) 3.27 0.000168 0.002437
GO:0006779 porphyrin-containing compound biosynthetic process 4.0% (2/50) 6.7 0.000167 0.002613
GO:0009987 cellular process 30.0% (15/50) 1.41 0.000293 0.003717
GO:0008152 metabolic process 36.0% (18/50) 1.23 0.000277 0.003743
GO:0006778 porphyrin-containing compound metabolic process 4.0% (2/50) 6.08 0.000401 0.004783
GO:0034641 cellular nitrogen compound metabolic process 16.0% (8/50) 2.08 0.000526 0.005936
GO:0034645 cellular macromolecule biosynthetic process 10.0% (5/50) 2.83 0.000677 0.007229
GO:1901564 organonitrogen compound metabolic process 22.0% (11/50) 1.61 0.000742 0.007531
GO:0006412 translation 8.0% (4/50) 3.16 0.001049 0.008521
GO:0006518 peptide metabolic process 8.0% (4/50) 3.05 0.001407 0.008656
GO:0019438 aromatic compound biosynthetic process 8.0% (4/50) 3.2 0.000942 0.008696
GO:0003735 structural constituent of ribosome 8.0% (4/50) 3.14 0.001117 0.008724
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors 4.0% (2/50) 5.4 0.001042 0.008818
GO:0043043 peptide biosynthetic process 8.0% (4/50) 3.12 0.001176 0.008845
GO:0005198 structural molecule activity 8.0% (4/50) 3.02 0.001491 0.0089
GO:0018208 peptidyl-proline modification 4.0% (2/50) 5.18 0.001407 0.008923
GO:0000413 protein peptidyl-prolyl isomerization 4.0% (2/50) 5.18 0.001407 0.008923
GO:0044444 cytoplasmic part 10.0% (5/50) 2.55 0.001629 0.008936
GO:0009059 macromolecule biosynthetic process 10.0% (5/50) 2.7 0.001015 0.008955
GO:0018130 heterocycle biosynthetic process 8.0% (4/50) 3.21 0.000932 0.009012
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 4.0% (2/50) 5.08 0.001608 0.009068
GO:0016859 cis-trans isomerase activity 4.0% (2/50) 5.08 0.001608 0.009068
GO:0043603 cellular amide metabolic process 8.0% (4/50) 2.97 0.001714 0.009158
GO:0004655 porphobilinogen synthase activity 2.0% (1/50) 9.61 0.001282 0.009295
GO:0043604 amide biosynthetic process 8.0% (4/50) 3.05 0.00138 0.009339
GO:1901362 organic cyclic compound biosynthetic process 8.0% (4/50) 3.06 0.001367 0.009567
GO:0032991 protein-containing complex 12.0% (6/50) 2.17 0.002071 0.010781
GO:0051920 peroxiredoxin activity 2.0% (1/50) 8.61 0.002562 0.012097
GO:0004109 coproporphyrinogen oxidase activity 2.0% (1/50) 8.61 0.002562 0.012097
GO:0004418 hydroxymethylbilane synthase activity 2.0% (1/50) 8.61 0.002562 0.012097
GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase 2.0% (1/50) 8.61 0.002562 0.012097
GO:0018193 peptidyl-amino acid modification 4.0% (2/50) 4.72 0.00263 0.012136
GO:0003676 nucleic acid binding 16.0% (8/50) 1.67 0.003276 0.01478
GO:0043229 intracellular organelle 10.0% (5/50) 2.29 0.003471 0.014991
GO:0043226 organelle 10.0% (5/50) 2.29 0.003471 0.014991
GO:0033743 peptide-methionine (R)-S-oxide reductase activity 2.0% (1/50) 8.02 0.003841 0.016246
GO:0071704 organic substance metabolic process 26.0% (13/50) 1.16 0.003993 0.016541
GO:0005488 binding 36.0% (18/50) 0.9 0.004319 0.017534
GO:0006072 glycerol-3-phosphate metabolic process 2.0% (1/50) 7.61 0.005119 0.019242
GO:0046168 glycerol-3-phosphate catabolic process 2.0% (1/50) 7.61 0.005119 0.019242
GO:0052646 alditol phosphate metabolic process 2.0% (1/50) 7.61 0.005119 0.019242
GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 2.0% (1/50) 7.61 0.005119 0.019242
GO:0006807 nitrogen compound metabolic process 22.0% (11/50) 1.25 0.005255 0.019397
GO:0055114 oxidation-reduction process 12.0% (6/50) 1.86 0.005963 0.021615
GO:0006553 lysine metabolic process 2.0% (1/50) 7.29 0.006394 0.021634
GO:0009089 lysine biosynthetic process via diaminopimelate 2.0% (1/50) 7.29 0.006394 0.021634
GO:0009085 lysine biosynthetic process 2.0% (1/50) 7.29 0.006394 0.021634
GO:0046451 diaminopimelate metabolic process 2.0% (1/50) 7.29 0.006394 0.021634
GO:0008150 biological_process 40.0% (20/50) 0.76 0.007283 0.024237
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 2.0% (1/50) 7.02 0.007668 0.025107
GO:0003723 RNA binding 6.0% (3/50) 2.8 0.009286 0.027321
GO:0097159 organic cyclic compound binding 24.0% (12/50) 1.07 0.009267 0.027665
GO:1901363 heterocyclic compound binding 24.0% (12/50) 1.07 0.009267 0.027665
GO:0043648 dicarboxylic acid metabolic process 2.0% (1/50) 6.8 0.008941 0.027922
GO:0004853 uroporphyrinogen decarboxylase activity 2.0% (1/50) 6.8 0.008941 0.027922
GO:0016491 oxidoreductase activity 12.0% (6/50) 1.73 0.009121 0.028053
GO:0051188 cofactor biosynthetic process 4.0% (2/50) 3.83 0.008841 0.028488
GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor 2.0% (1/50) 6.61 0.010211 0.029613
GO:0044424 intracellular part 12.0% (6/50) 1.61 0.01322 0.037797
GO:0006801 superoxide metabolic process 2.0% (1/50) 5.91 0.016542 0.045378
GO:0072593 reactive oxygen species metabolic process 2.0% (1/50) 5.91 0.016542 0.045378
GO:0051186 cofactor metabolic process 4.0% (2/50) 3.37 0.016155 0.045547
GO:0044464 cell part 12.0% (6/50) 1.52 0.017746 0.048033
GO:0016853 isomerase activity 4.0% (2/50) 3.29 0.018013 0.048113
GO:0003746 translation elongation factor activity 2.0% (1/50) 5.7 0.019062 0.048983
GO:0009067 aspartate family amino acid biosynthetic process 2.0% (1/50) 5.7 0.019062 0.048983
GO:0006414 translational elongation 2.0% (1/50) 5.7 0.019062 0.048983
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_12 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_30 0.059 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_71 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_140 0.087 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_192 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_206 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_214 0.04 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_238 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_265 0.036 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_47 0.028 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_71 0.032 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_85 0.026 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_157 0.018 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_187 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_8 0.09 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_9 0.037 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_84 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_7 0.055 Gene family Compare
Oryza sativa HCCA cluster Cluster_21 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_80 0.029 Gene family Compare
Oryza sativa HCCA cluster Cluster_170 0.167 Gene family Compare
Oryza sativa HCCA cluster Cluster_226 0.054 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_302 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_186 0.051 Gene family Compare
Picea abies HCCA cluster Cluster_205 0.044 Gene family Compare
Picea abies HCCA cluster Cluster_456 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_476 0.026 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_11 0.037 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_25 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_43 0.023 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_94 0.015 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_169 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_198 0.021 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_203 0.065 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_92 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_141 0.056 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_149 0.05 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_183 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_206 0.02 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_234 0.081 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_245 0.04 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_291 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_2 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_55 0.025 Gene family Compare
Vitis vinifera HCCA cluster Cluster_104 0.018 Gene family Compare
Vitis vinifera HCCA cluster Cluster_120 0.074 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_211 0.157 Gene family Compare
Zea mays HCCA cluster Cluster_53 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_75 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_78 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_313 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_354 0.019 Gene family Compare
Sequences (50) (download table)

InterPro Domains

GO Terms

Family Terms