Coexpression cluster: Cluster_142 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0032991 protein-containing complex 11.59% (8/69) 3.34 1e-06 0.000344
GO:0003674 molecular_function 47.83% (33/69) 1.08 4e-06 0.000512
GO:0098798 mitochondrial protein-containing complex 4.35% (3/69) 5.26 6.9e-05 0.00372
GO:0005575 cellular_component 18.84% (13/69) 1.83 6.1e-05 0.004142
GO:0098800 inner mitochondrial membrane protein complex 4.35% (3/69) 5.38 5.4e-05 0.004878
GO:0005488 binding 30.43% (21/69) 1.19 0.000169 0.007622
GO:0003723 RNA binding 8.7% (6/69) 2.77 0.000254 0.009836
GO:0009141 nucleoside triphosphate metabolic process 4.35% (3/69) 4.2 0.000606 0.010266
GO:0009144 purine nucleoside triphosphate metabolic process 4.35% (3/69) 4.26 0.000532 0.01029
GO:0009205 purine ribonucleoside triphosphate metabolic process 4.35% (3/69) 4.26 0.000532 0.01029
GO:0009199 ribonucleoside triphosphate metabolic process 4.35% (3/69) 4.26 0.000532 0.01029
GO:0046034 ATP metabolic process 4.35% (3/69) 4.26 0.000532 0.01029
GO:0005667 transcription regulator complex 2.9% (2/69) 5.75 0.000646 0.0103
GO:0008150 biological_process 27.54% (19/69) 1.19 0.000397 0.010767
GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) 2.9% (2/69) 5.79 0.000605 0.010929
GO:0009259 ribonucleotide metabolic process 4.35% (3/69) 4.04 0.000837 0.011337
GO:0009150 purine ribonucleotide metabolic process 4.35% (3/69) 4.04 0.000837 0.011337
GO:0019693 ribose phosphate metabolic process 4.35% (3/69) 4.04 0.000837 0.011337
GO:0003676 nucleic acid binding 13.04% (9/69) 2.01 0.000382 0.011504
GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) 2.9% (2/69) 6.18 0.000354 0.011983
GO:0010387 COP9 signalosome assembly 1.45% (1/69) 9.7 0.001201 0.01356
GO:0008180 COP9 signalosome 1.45% (1/69) 9.7 0.001201 0.01356
GO:0051315 attachment of mitotic spindle microtubules to kinetochore 1.45% (1/69) 8.7 0.0024 0.014141
GO:0051049 regulation of transport 1.45% (1/69) 8.7 0.0024 0.014141
GO:0043269 regulation of monoatomic ion transport 1.45% (1/69) 8.7 0.0024 0.014141
GO:2001256 regulation of store-operated calcium entry 1.45% (1/69) 8.7 0.0024 0.014141
GO:0032879 regulation of localization 1.45% (1/69) 8.7 0.0024 0.014141
GO:0008608 attachment of spindle microtubules to kinetochore 1.45% (1/69) 8.7 0.0024 0.014141
GO:0010959 regulation of metal ion transport 1.45% (1/69) 8.7 0.0024 0.014141
GO:0032299 ribonuclease H2 complex 1.45% (1/69) 8.7 0.0024 0.014141
GO:0051924 regulation of calcium ion transport 1.45% (1/69) 8.7 0.0024 0.014141
GO:0006163 purine nucleotide metabolic process 4.35% (3/69) 3.9 0.001097 0.014162
GO:0072521 purine-containing compound metabolic process 4.35% (3/69) 3.88 0.001155 0.014228
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain 2.9% (2/69) 4.77 0.002484 0.014325
GO:0046483 heterocycle metabolic process 7.25% (5/69) 2.38 0.002772 0.014728
GO:0009260 ribonucleotide biosynthetic process 2.9% (2/69) 4.7 0.002731 0.0148
GO:0009152 purine ribonucleotide biosynthetic process 2.9% (2/69) 4.7 0.002731 0.0148
GO:0046390 ribose phosphate biosynthetic process 2.9% (2/69) 4.7 0.002731 0.0148
GO:0009117 nucleotide metabolic process 4.35% (3/69) 3.78 0.001404 0.015225
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.9% (2/69) 4.95 0.001953 0.015569
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.9% (2/69) 4.95 0.001953 0.015569
GO:0015986 proton motive force-driven ATP synthesis 2.9% (2/69) 4.95 0.001953 0.015569
GO:0009142 nucleoside triphosphate biosynthetic process 2.9% (2/69) 4.95 0.001953 0.015569
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.9% (2/69) 4.95 0.001953 0.015569
GO:0006754 ATP biosynthetic process 2.9% (2/69) 4.95 0.001953 0.015569
GO:0006725 cellular aromatic compound metabolic process 7.25% (5/69) 2.35 0.003001 0.015639
GO:0006753 nucleoside phosphate metabolic process 4.35% (3/69) 3.73 0.001541 0.016061
GO:1901360 organic cyclic compound metabolic process 7.25% (5/69) 2.33 0.00321 0.016112
GO:1901363 heterocyclic compound binding 18.84% (13/69) 1.29 0.00215 0.016188
GO:0097159 organic cyclic compound binding 18.84% (13/69) 1.29 0.00215 0.016188
GO:0034654 nucleobase-containing compound biosynthetic process 4.35% (3/69) 3.36 0.003186 0.016293
GO:1901135 carbohydrate derivative metabolic process 4.35% (3/69) 3.53 0.002317 0.016968
GO:0019637 organophosphate metabolic process 4.35% (3/69) 3.3 0.003607 0.017773
GO:0055086 nucleobase-containing small molecule metabolic process 4.35% (3/69) 3.66 0.001786 0.017929
GO:0006139 nucleobase-containing compound metabolic process 7.25% (5/69) 2.51 0.001878 0.018174
GO:0006164 purine nucleotide biosynthetic process 2.9% (2/69) 4.43 0.003923 0.018987
GO:0072522 purine-containing compound biosynthetic process 2.9% (2/69) 4.38 0.004227 0.020099
GO:0009987 cellular process 18.84% (13/69) 1.17 0.004513 0.021088
GO:0098796 membrane protein complex 4.35% (3/69) 3.17 0.004592 0.021093
GO:1901293 nucleoside phosphate biosynthetic process 2.9% (2/69) 4.23 0.005203 0.02274
GO:0009165 nucleotide biosynthetic process 2.9% (2/69) 4.23 0.005203 0.02274
GO:1901137 carbohydrate derivative biosynthetic process 2.9% (2/69) 4.24 0.00509 0.022988
GO:0019438 aromatic compound biosynthetic process 4.35% (3/69) 3.03 0.005992 0.024603
GO:0018130 heterocycle biosynthetic process 4.35% (3/69) 3.05 0.005778 0.024855
GO:0005730 nucleolus 1.45% (1/69) 7.38 0.00599 0.024974
GO:0031262 Ndc80 complex 1.45% (1/69) 7.38 0.00599 0.024974
GO:0008237 metallopeptidase activity 2.9% (2/69) 4.06 0.006521 0.026375
GO:0140513 nuclear protein-containing complex 2.9% (2/69) 4.03 0.006775 0.027
GO:1901362 organic cyclic compound biosynthetic process 4.35% (3/69) 2.92 0.007436 0.029203
GO:0051539 4 iron, 4 sulfur cluster binding 1.45% (1/69) 6.89 0.008376 0.030675
GO:0006401 RNA catabolic process 1.45% (1/69) 6.89 0.008376 0.030675
GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c 1.45% (1/69) 6.89 0.008376 0.030675
GO:0045275 respiratory chain complex III 1.45% (1/69) 6.89 0.008376 0.030675
GO:0005750 mitochondrial respiratory chain complex III 1.45% (1/69) 6.89 0.008376 0.030675
GO:0034641 cellular nitrogen compound metabolic process 8.7% (6/69) 1.72 0.009753 0.035241
GO:0006091 generation of precursor metabolites and energy 2.9% (2/69) 3.72 0.010168 0.036257
GO:0090407 organophosphate biosynthetic process 2.9% (2/69) 3.71 0.010323 0.036331
GO:0005672 transcription factor TFIIA complex 1.45% (1/69) 6.53 0.010757 0.037373
GO:0015078 proton transmembrane transporter activity 2.9% (2/69) 3.66 0.011112 0.038119
GO:1903047 mitotic cell cycle process 1.45% (1/69) 6.38 0.011945 0.040463
GO:0042254 ribosome biogenesis 1.45% (1/69) 6.24 0.013132 0.043398
GO:0022613 ribonucleoprotein complex biogenesis 1.45% (1/69) 6.24 0.013132 0.043398
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Actinostachys digitata HCCA Cluster_31 0.02 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_88 0.019 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_143 0.025 OrthoFinder output from all 47 species Compare
Actinostachys digitata HCCA Cluster_211 0.028 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_2 0.015 OrthoFinder output from all 47 species Compare
Alsophila latebrosa HCCA Cluster_167 0.019 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_96 0.018 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_122 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_145 0.016 OrthoFinder output from all 47 species Compare
Amblovenatum opulentum HCCA Cluster_198 0.02 OrthoFinder output from all 47 species Compare
Alsophila spinulosa HCCA Cluster_182 0.015 OrthoFinder output from all 47 species Compare
Cyanophora paradoxa HCCA Cluster_55 0.016 OrthoFinder output from all 47 species Compare
Chlamydomonas reinhardtii HCCA Cluster_48 0.02 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_97 0.016 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_121 0.018 OrthoFinder output from all 47 species Compare
Ceratopteris richardii HCCA Cluster_267 0.017 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_101 0.019 OrthoFinder output from all 47 species Compare
Dicranopteris curranii HCCA Cluster_165 0.021 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_105 0.023 OrthoFinder output from all 47 species Compare
Davallia denticulata HCCA Cluster_116 0.022 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_105 0.02 OrthoFinder output from all 47 species Compare
Ginkgo biloba HCCA Cluster_261 0.016 OrthoFinder output from all 47 species Compare
Lindsaea ensifolia HCCA Cluster_86 0.019 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_73 0.015 OrthoFinder output from all 47 species Compare
Lygodium flexuosum HCCA Cluster_187 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_74 0.016 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_84 0.018 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_147 0.017 OrthoFinder output from all 47 species Compare
Microlepia speluncae HCCA Cluster_291 0.017 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_90 0.02 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_114 0.018 OrthoFinder output from all 47 species Compare
Nephrolepis biserrata HCCA Cluster_184 0.017 OrthoFinder output from all 47 species Compare
Picea abies HCCA Cluster_116 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_53 0.02 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_76 0.016 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_79 0.018 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_129 0.026 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_199 0.023 OrthoFinder output from all 47 species Compare
Pleocnemia irregularis HCCA Cluster_207 0.019 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_104 0.023 OrthoFinder output from all 47 species Compare
Psilotum nudum HCCA Cluster_159 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_64 0.016 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_160 0.023 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_181 0.017 OrthoFinder output from all 47 species Compare
Pyrrosia piloselloides HCCA Cluster_385 0.022 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_48 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_53 0.017 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_74 0.023 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_81 0.019 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_85 0.029 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_91 0.018 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_162 0.022 OrthoFinder output from all 47 species Compare
Salvinia molesta HCCA Cluster_182 0.02 OrthoFinder output from all 47 species Compare
Salvinia cucullata HCCA Cluster_40 0.019 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_93 0.022 OrthoFinder output from all 47 species Compare
Solanum lycopersicum HCCA Cluster_148 0.022 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_151 0.019 OrthoFinder output from all 47 species Compare
Stenochlaena palustris HCCA Cluster_185 0.017 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_70 0.026 OrthoFinder output from all 47 species Compare
Tectaria incisa HCCA Cluster_159 0.016 OrthoFinder output from all 47 species Compare
Vitis vinifera HCCA Cluster_91 0.02 OrthoFinder output from all 47 species Compare
Zea mays HCCA Cluster_170 0.021 OrthoFinder output from all 47 species Compare
Sequences (69) (download table)

InterPro Domains

GO Terms

Family Terms