Coexpression cluster: Cluster_331 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1901360 organic cyclic compound metabolic process 22.45% (11/49) 2.96 0.0 7e-06
GO:0006725 cellular aromatic compound metabolic process 22.45% (11/49) 2.99 0.0 7e-06
GO:0006139 nucleobase-containing compound metabolic process 22.45% (11/49) 3.14 0.0 8e-06
GO:0034641 cellular nitrogen compound metabolic process 24.49% (12/49) 2.7 0.0 9e-06
GO:0046483 heterocycle metabolic process 22.45% (11/49) 3.0 0.0 1e-05
GO:0090304 nucleic acid metabolic process 18.37% (9/49) 3.16 1e-06 2.4e-05
GO:0016070 RNA metabolic process 14.29% (7/49) 3.73 1e-06 2.7e-05
GO:0034660 ncRNA metabolic process 10.2% (5/49) 4.84 1e-06 3e-05
GO:0006396 RNA processing 10.2% (5/49) 4.67 2e-06 4.1e-05
GO:0034470 ncRNA processing 8.16% (4/49) 5.35 3e-06 6.8e-05
GO:1901363 heterocyclic compound binding 36.73% (18/49) 1.69 4e-06 7.1e-05
GO:0097159 organic cyclic compound binding 36.73% (18/49) 1.69 4e-06 7.1e-05
GO:0003676 nucleic acid binding 22.45% (11/49) 2.16 2.5e-05 0.000447
GO:1901265 nucleoside phosphate binding 22.45% (11/49) 2.09 3.8e-05 0.000582
GO:0000166 nucleotide binding 22.45% (11/49) 2.09 3.8e-05 0.000582
GO:0005488 binding 44.9% (22/49) 1.21 4.1e-05 0.000594
GO:0043168 anion binding 22.45% (11/49) 2.04 5.3e-05 0.000679
GO:0035639 purine ribonucleoside triphosphate binding 20.41% (10/49) 2.19 5.3e-05 0.000718
GO:0036094 small molecule binding 22.45% (11/49) 2.02 6.2e-05 0.000754
GO:0003723 RNA binding 10.2% (5/49) 3.56 6.5e-05 0.000757
GO:0005524 ATP binding 18.37% (9/49) 2.24 9.8e-05 0.000877
GO:0097367 carbohydrate derivative binding 20.41% (10/49) 2.08 9.7e-05 0.000899
GO:0032553 ribonucleotide binding 20.41% (10/49) 2.09 9.4e-05 0.000912
GO:0032040 small-subunit processome 4.08% (2/49) 7.18 8.4e-05 0.000933
GO:0017076 purine nucleotide binding 20.41% (10/49) 2.09 9.4e-05 0.000944
GO:0032555 purine ribonucleotide binding 20.41% (10/49) 2.1 9e-05 0.000944
GO:0030684 preribosome 4.08% (2/49) 6.83 0.000139 0.001198
GO:0008144 drug binding 18.37% (9/49) 2.15 0.000161 0.001332
GO:0030554 adenyl nucleotide binding 18.37% (9/49) 2.13 0.000176 0.001357
GO:0032559 adenyl ribonucleotide binding 18.37% (9/49) 2.14 0.000171 0.001366
GO:0006399 tRNA metabolic process 6.12% (3/49) 4.59 0.000269 0.00201
GO:0016072 rRNA metabolic process 4.08% (2/49) 5.35 0.001112 0.00759
GO:0006364 rRNA processing 4.08% (2/49) 5.35 0.001112 0.00759
GO:0008033 tRNA processing 4.08% (2/49) 5.39 0.001056 0.007657
GO:0006807 nitrogen compound metabolic process 24.49% (12/49) 1.4 0.00138 0.009149
GO:0044237 cellular metabolic process 24.49% (12/49) 1.39 0.001511 0.009736
GO:0032991 protein-containing complex 12.24% (6/49) 2.2 0.001864 0.011688
GO:0140098 catalytic activity, acting on RNA 6.12% (3/49) 3.54 0.002207 0.013473
GO:0043167 ion binding 22.45% (11/49) 1.39 0.002394 0.014243
GO:0044424 intracellular part 14.29% (7/49) 1.86 0.002886 0.016739
GO:0030488 tRNA methylation 2.04% (1/49) 8.05 0.003765 0.01985
GO:0034708 methyltransferase complex 2.04% (1/49) 8.05 0.003765 0.01985
GO:0043527 tRNA methyltransferase complex 2.04% (1/49) 8.05 0.003765 0.01985
GO:0031515 tRNA (m1A) methyltransferase complex 2.04% (1/49) 8.05 0.003765 0.01985
GO:0044464 cell part 14.29% (7/49) 1.77 0.004144 0.021365
GO:0034654 nucleobase-containing compound biosynthetic process 6.12% (3/49) 3.16 0.004634 0.02337
GO:0017150 tRNA dihydrouridine synthase activity 2.04% (1/49) 7.64 0.005016 0.024762
GO:0140101 catalytic activity, acting on a tRNA 4.08% (2/49) 4.23 0.005165 0.024966
GO:0003674 molecular_function 55.1% (27/49) 0.59 0.005986 0.028341
GO:0017056 structural constituent of nuclear pore 2.04% (1/49) 7.31 0.006267 0.028507
GO:0005730 nucleolus 2.04% (1/49) 7.31 0.006267 0.028507
GO:0044238 primary metabolic process 24.49% (12/49) 1.13 0.006595 0.029422
GO:0043170 macromolecule metabolic process 20.41% (10/49) 1.28 0.006777 0.029665
GO:0009987 cellular process 24.49% (12/49) 1.11 0.007306 0.031387
GO:1901293 nucleoside phosphate biosynthetic process 4.08% (2/49) 3.87 0.008355 0.034614
GO:0009165 nucleotide biosynthetic process 4.08% (2/49) 3.87 0.008355 0.034614
GO:0044249 cellular biosynthetic process 10.2% (5/49) 1.95 0.009361 0.035029
GO:0019438 aromatic compound biosynthetic process 6.12% (3/49) 2.82 0.008927 0.035102
GO:0005643 nuclear pore 2.04% (1/49) 6.64 0.010008 0.03518
GO:0051169 nuclear transport 2.04% (1/49) 6.64 0.010008 0.03518
GO:0006913 nucleocytoplasmic transport 2.04% (1/49) 6.64 0.010008 0.03518
GO:0001510 RNA methylation 2.04% (1/49) 6.64 0.010008 0.03518
GO:0044428 nuclear part 4.08% (2/49) 3.79 0.00926 0.03522
GO:0018130 heterocycle biosynthetic process 6.12% (3/49) 2.82 0.008855 0.035422
GO:0008134 transcription factor binding 2.04% (1/49) 6.83 0.008762 0.035665
GO:0071704 organic substance metabolic process 24.49% (12/49) 1.07 0.009236 0.035712
GO:0043232 intracellular non-membrane-bounded organelle 6.12% (3/49) 2.66 0.011888 0.037782
GO:0043228 non-membrane-bounded organelle 6.12% (3/49) 2.66 0.011888 0.037782
GO:0044271 cellular nitrogen compound biosynthetic process 8.16% (4/49) 2.17 0.011795 0.038543
GO:0003883 CTP synthase activity 2.04% (1/49) 6.31 0.012495 0.03865
GO:0005852 eukaryotic translation initiation factor 3 complex 2.04% (1/49) 6.31 0.012495 0.03865
GO:0006221 pyrimidine nucleotide biosynthetic process 2.04% (1/49) 6.18 0.013736 0.038862
GO:0046040 IMP metabolic process 2.04% (1/49) 6.18 0.013736 0.038862
GO:0006400 tRNA modification 2.04% (1/49) 6.18 0.013736 0.038862
GO:0006188 IMP biosynthetic process 2.04% (1/49) 6.18 0.013736 0.038862
GO:0005694 chromosome 2.04% (1/49) 6.18 0.013736 0.038862
GO:0006220 pyrimidine nucleotide metabolic process 2.04% (1/49) 6.18 0.013736 0.038862
GO:1901576 organic substance biosynthetic process 10.2% (5/49) 1.87 0.011749 0.03894
GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity 2.04% (1/49) 6.47 0.011252 0.038963
GO:1901362 organic cyclic compound biosynthetic process 6.12% (3/49) 2.67 0.01172 0.039406
GO:0009117 nucleotide metabolic process 4.08% (2/49) 3.54 0.012932 0.039478
GO:0016874 ligase activity 4.08% (2/49) 3.61 0.011705 0.039935
GO:1990904 ribonucleoprotein complex 6.12% (3/49) 2.56 0.014297 0.039964
GO:0006753 nucleoside phosphate metabolic process 4.08% (2/49) 3.43 0.01497 0.041344
GO:0043226 organelle 8.16% (4/49) 2.0 0.017665 0.047107
GO:0043229 intracellular organelle 8.16% (4/49) 2.0 0.017665 0.047107
GO:0009058 biosynthetic process 10.2% (5/49) 1.72 0.017264 0.04712
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_28 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.087 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.027 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_101 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.058 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_176 0.03 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.057 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.037 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_194 0.021 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.076 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_38 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_69 0.018 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_98 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_146 0.017 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.07 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_226 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_242 0.025 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.031 Gene family Compare
Oryza sativa HCCA cluster Cluster_284 0.04 Gene family Compare
Picea abies HCCA cluster Cluster_27 0.03 Gene family Compare
Picea abies HCCA cluster Cluster_73 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_200 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_248 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_269 0.029 Gene family Compare
Picea abies HCCA cluster Cluster_339 0.031 Gene family Compare
Picea abies HCCA cluster Cluster_380 0.025 Gene family Compare
Picea abies HCCA cluster Cluster_399 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_850 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_10 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_36 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_55 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.047 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_102 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_197 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_14 0.067 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.035 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.03 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.05 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_275 0.021 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_290 0.038 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.054 Gene family Compare
Vitis vinifera HCCA cluster Cluster_82 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.056 Gene family Compare
Vitis vinifera HCCA cluster Cluster_103 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_148 0.02 Gene family Compare
Vitis vinifera HCCA cluster Cluster_149 0.03 Gene family Compare
Vitis vinifera HCCA cluster Cluster_171 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_120 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_297 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_346 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_459 0.02 Gene family Compare
Sequences (49) (download table)

InterPro Domains

GO Terms

Family Terms