Coexpression cluster: Cluster_49 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0036094 small molecule binding 16.91% (23/136) 2.03 0.0 2e-06
GO:0000166 nucleotide binding 15.44% (21/136) 1.96 0.0 4e-06
GO:1901265 nucleoside phosphate binding 15.44% (21/136) 1.96 0.0 4e-06
GO:0008144 drug binding 13.97% (19/136) 2.14 0.0 5e-06
GO:0005488 binding 30.88% (42/136) 1.24 0.0 5e-06
GO:0030554 adenyl nucleotide binding 13.24% (18/136) 2.11 0.0 5e-06
GO:0032559 adenyl ribonucleotide binding 13.24% (18/136) 2.12 0.0 6e-06
GO:0005524 ATP binding 13.24% (18/136) 2.13 0.0 6e-06
GO:0043168 anion binding 14.71% (20/136) 1.89 0.0 1.1e-05
GO:0097367 carbohydrate derivative binding 13.97% (19/136) 1.93 1e-06 1.3e-05
GO:0035639 purine ribonucleoside triphosphate binding 13.24% (18/136) 1.9 2e-06 3.3e-05
GO:0017076 purine nucleotide binding 13.24% (18/136) 1.88 2e-06 3.3e-05
GO:0032555 purine ribonucleotide binding 13.24% (18/136) 1.89 2e-06 3.3e-05
GO:0032553 ribonucleotide binding 13.24% (18/136) 1.86 2e-06 3.9e-05
GO:0043167 ion binding 16.18% (22/136) 1.55 5e-06 7.9e-05
GO:0006259 DNA metabolic process 6.62% (9/136) 2.84 5e-06 8.1e-05
GO:1901363 heterocyclic compound binding 17.65% (24/136) 1.45 7e-06 8.5e-05
GO:0097159 organic cyclic compound binding 17.65% (24/136) 1.45 7e-06 8.5e-05
GO:0030983 mismatched DNA binding 2.21% (3/136) 5.63 2.6e-05 0.00032
GO:0006298 mismatch repair 2.21% (3/136) 5.5 3.5e-05 0.000403
GO:0003674 molecular_function 35.29% (48/136) 0.74 9.3e-05 0.00103
GO:0006281 DNA repair 3.68% (5/136) 3.29 0.000166 0.001754
GO:0051716 cellular response to stimulus 3.68% (5/136) 3.23 0.000202 0.001881
GO:0006974 cellular response to DNA damage stimulus 3.68% (5/136) 3.23 0.000202 0.001881
GO:0033554 cellular response to stress 3.68% (5/136) 3.23 0.000202 0.001881
GO:0006950 response to stress 3.68% (5/136) 3.1 0.000305 0.002538
GO:0051129 negative regulation of cellular component organization 1.47% (2/136) 6.18 0.000298 0.002569
GO:0010639 negative regulation of organelle organization 1.47% (2/136) 6.18 0.000298 0.002569
GO:0050896 response to stimulus 3.68% (5/136) 2.92 0.000539 0.004334
GO:0005634 nucleus 2.94% (4/136) 3.4 0.000576 0.004473
GO:0003690 double-stranded DNA binding 2.21% (3/136) 4.0 0.000862 0.006479
GO:0090304 nucleic acid metabolic process 6.62% (9/136) 1.83 0.001053 0.00767
GO:0006260 DNA replication 2.21% (3/136) 3.77 0.001389 0.00981
GO:0043231 intracellular membrane-bounded organelle 2.94% (4/136) 2.98 0.001689 0.01093
GO:0043227 membrane-bounded organelle 2.94% (4/136) 2.98 0.001689 0.01093
GO:0033043 regulation of organelle organization 1.47% (2/136) 5.05 0.001602 0.010978
GO:0051095 regulation of helicase activity 0.74% (1/136) 7.5 0.005506 0.015837
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor 0.74% (1/136) 7.5 0.005506 0.015837
GO:0051097 negative regulation of helicase activity 0.74% (1/136) 7.5 0.005506 0.015837
GO:0010826 negative regulation of centrosome duplication 0.74% (1/136) 7.5 0.005506 0.015837
GO:1905463 negative regulation of DNA duplex unwinding 0.74% (1/136) 7.5 0.005506 0.015837
GO:1905462 regulation of DNA duplex unwinding 0.74% (1/136) 7.5 0.005506 0.015837
GO:0009265 2'-deoxyribonucleotide biosynthetic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:1905775 negative regulation of DNA helicase activity 0.74% (1/136) 7.5 0.005506 0.015837
GO:1905774 regulation of DNA helicase activity 0.74% (1/136) 7.5 0.005506 0.015837
GO:0010824 regulation of centrosome duplication 0.74% (1/136) 7.5 0.005506 0.015837
GO:0019206 nucleoside kinase activity 0.74% (1/136) 7.5 0.005506 0.015837
GO:0019692 deoxyribose phosphate metabolic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0050797 thymidylate synthase (FAD) activity 0.74% (1/136) 7.5 0.005506 0.015837
GO:0009176 pyrimidine deoxyribonucleoside monophosphate metabolic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0009177 pyrimidine deoxyribonucleoside monophosphate biosynthetic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0046605 regulation of centrosome cycle 0.74% (1/136) 7.5 0.005506 0.015837
GO:0046606 negative regulation of centrosome cycle 0.74% (1/136) 7.5 0.005506 0.015837
GO:0009219 pyrimidine deoxyribonucleotide metabolic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0009221 pyrimidine deoxyribonucleotide biosynthetic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0009263 deoxyribonucleotide biosynthetic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0009394 2'-deoxyribonucleotide metabolic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0070507 regulation of microtubule cytoskeleton organization 0.74% (1/136) 7.5 0.005506 0.015837
GO:0046385 deoxyribose phosphate biosynthetic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0046073 dTMP metabolic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0009162 deoxyribonucleoside monophosphate metabolic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0009157 deoxyribonucleoside monophosphate biosynthetic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0019136 deoxynucleoside kinase activity 0.74% (1/136) 7.5 0.005506 0.015837
GO:0004797 thymidine kinase activity 0.74% (1/136) 7.5 0.005506 0.015837
GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor 0.74% (1/136) 7.5 0.005506 0.015837
GO:0061731 ribonucleoside-diphosphate reductase activity 0.74% (1/136) 7.5 0.005506 0.015837
GO:0042555 MCM complex 0.74% (1/136) 7.5 0.005506 0.015837
GO:0032886 regulation of microtubule-based process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0006231 dTMP biosynthetic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0009129 pyrimidine nucleoside monophosphate metabolic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0036038 MKS complex 0.74% (1/136) 7.5 0.005506 0.015837
GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process 0.74% (1/136) 7.5 0.005506 0.015837
GO:0042083 5,10-methylenetetrahydrofolate-dependent methyltransferase activity 0.74% (1/136) 7.5 0.005506 0.015837
GO:0005515 protein binding 11.76% (16/136) 1.14 0.002523 0.015889
GO:0051128 regulation of cellular component organization 1.47% (2/136) 4.7 0.002622 0.016077
GO:0046483 heterocycle metabolic process 7.35% (10/136) 1.36 0.005832 0.016572
GO:0006725 cellular aromatic compound metabolic process 7.35% (10/136) 1.36 0.006003 0.016851
GO:0048523 negative regulation of cellular process 1.47% (2/136) 4.6 0.003014 0.01801
GO:1901360 organic cyclic compound metabolic process 7.35% (10/136) 1.33 0.006599 0.018305
GO:0006139 nucleobase-containing compound metabolic process 7.35% (10/136) 1.46 0.003701 0.021557
GO:0003677 DNA binding 4.41% (6/136) 2.02 0.003814 0.021676
GO:0140097 catalytic activity, acting on DNA 2.21% (3/136) 3.21 0.004237 0.023506
GO:0048519 negative regulation of biological process 1.47% (2/136) 4.26 0.004839 0.026221
GO:0019787 ubiquitin-like protein transferase activity 1.47% (2/136) 3.65 0.011084 0.026353
GO:0004842 ubiquitin-protein transferase activity 1.47% (2/136) 3.65 0.011084 0.026353
GO:0003887 DNA-directed DNA polymerase activity 1.47% (2/136) 3.75 0.009652 0.026457
GO:0003676 nucleic acid binding 6.62% (9/136) 1.31 0.011058 0.026839
GO:0120036 plasma membrane bounded cell projection organization 0.74% (1/136) 6.5 0.010981 0.026933
GO:0030030 cell projection organization 0.74% (1/136) 6.5 0.010981 0.026933
GO:0010948 negative regulation of cell cycle process 0.74% (1/136) 6.5 0.010981 0.026933
GO:0044782 cilium organization 0.74% (1/136) 6.5 0.010981 0.026933
GO:0030031 cell projection assembly 0.74% (1/136) 6.5 0.010981 0.026933
GO:0009262 deoxyribonucleotide metabolic process 0.74% (1/136) 6.5 0.010981 0.026933
GO:0060271 cilium assembly 0.74% (1/136) 6.5 0.010981 0.026933
GO:0120031 plasma membrane bounded cell projection assembly 0.74% (1/136) 6.5 0.010981 0.026933
GO:2001251 negative regulation of chromosome organization 0.74% (1/136) 6.5 0.010981 0.026933
GO:0044260 cellular macromolecule metabolic process 8.09% (11/136) 1.31 0.005106 0.02704
GO:0034061 DNA polymerase activity 1.47% (2/136) 3.7 0.010357 0.02806
GO:0034641 cellular nitrogen compound metabolic process 7.35% (10/136) 1.18 0.013509 0.031795
GO:0019205 nucleobase-containing compound kinase activity 0.74% (1/136) 5.92 0.016427 0.035439
GO:0044092 negative regulation of molecular function 0.74% (1/136) 5.92 0.016427 0.035439
GO:0006220 pyrimidine nucleotide metabolic process 0.74% (1/136) 5.92 0.016427 0.035439
GO:0006221 pyrimidine nucleotide biosynthetic process 0.74% (1/136) 5.92 0.016427 0.035439
GO:0043086 negative regulation of catalytic activity 0.74% (1/136) 5.92 0.016427 0.035439
GO:0051346 negative regulation of hydrolase activity 0.74% (1/136) 5.92 0.016427 0.035439
GO:0051494 negative regulation of cytoskeleton organization 0.74% (1/136) 5.92 0.016427 0.035439
GO:0008658 penicillin binding 0.74% (1/136) 5.92 0.016427 0.035439
GO:0033293 monocarboxylic acid binding 0.74% (1/136) 5.92 0.016427 0.035439
GO:0044463 cell projection part 0.74% (1/136) 5.5 0.021843 0.043499
GO:0043015 gamma-tubulin binding 0.74% (1/136) 5.5 0.021843 0.043499
GO:0033044 regulation of chromosome organization 0.74% (1/136) 5.5 0.021843 0.043499
GO:0044441 ciliary part 0.74% (1/136) 5.5 0.021843 0.043499
GO:0120038 plasma membrane bounded cell projection part 0.74% (1/136) 5.5 0.021843 0.043499
GO:0016725 oxidoreductase activity, acting on CH or CH2 groups 0.74% (1/136) 5.5 0.021843 0.043499
GO:0043177 organic acid binding 0.74% (1/136) 5.5 0.021843 0.043499
GO:0051336 regulation of hydrolase activity 0.74% (1/136) 5.5 0.021843 0.043499
GO:0031406 carboxylic acid binding 0.74% (1/136) 5.5 0.021843 0.043499
GO:0043229 intracellular organelle 2.94% (4/136) 1.91 0.02218 0.043796
GO:0043226 organelle 2.94% (4/136) 1.9 0.02293 0.044896
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_15 0.032 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_103 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_126 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_249 0.034 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_250 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_7 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_25 0.026 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_75 0.024 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_85 0.024 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_95 0.026 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_123 0.023 Gene family Compare
Oryza sativa HCCA cluster Cluster_224 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_237 0.027 Gene family Compare
Picea abies HCCA cluster Cluster_87 0.026 Gene family Compare
Picea abies HCCA cluster Cluster_288 0.047 Gene family Compare
Picea abies HCCA cluster Cluster_375 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_66 0.031 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_104 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_31 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_47 0.04 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_128 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_147 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_42 0.028 Gene family Compare
Vitis vinifera HCCA cluster Cluster_122 0.015 Gene family Compare
Vitis vinifera HCCA cluster Cluster_224 0.014 Gene family Compare
Vitis vinifera HCCA cluster Cluster_226 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_37 0.049 Gene family Compare
Zea mays HCCA cluster Cluster_286 0.014 Gene family Compare
Sequences (136) (download table)

InterPro Domains

GO Terms

Family Terms