Coexpression cluster: Cluster_411 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016874 ligase activity 7.69% (7/91) 4.91 0.0 0.0
GO:0043038 amino acid activation 5.49% (5/91) 5.88 0.0 1e-06
GO:0043039 tRNA aminoacylation 5.49% (5/91) 5.88 0.0 1e-06
GO:0004812 aminoacyl-tRNA ligase activity 5.49% (5/91) 5.88 0.0 1e-06
GO:0016875 ligase activity, forming carbon-oxygen bonds 5.49% (5/91) 5.88 0.0 1e-06
GO:0140101 catalytic activity, acting on a tRNA 5.49% (5/91) 5.43 0.0 2e-06
GO:0006399 tRNA metabolic process 5.49% (5/91) 5.27 0.0 3e-06
GO:0034660 ncRNA metabolic process 5.49% (5/91) 4.93 1e-06 1e-05
GO:0006418 tRNA aminoacylation for protein translation 4.4% (4/91) 5.76 1e-06 1.2e-05
GO:0006520 cellular amino acid metabolic process 5.49% (5/91) 4.2 9e-06 9.2e-05
GO:0140098 catalytic activity, acting on RNA 5.49% (5/91) 3.85 2.8e-05 0.00027
GO:0090304 nucleic acid metabolic process 6.59% (6/91) 3.16 6e-05 0.000543
GO:0005524 ATP binding 12.09% (11/91) 2.05 7.3e-05 0.000603
GO:0019752 carboxylic acid metabolic process 5.49% (5/91) 3.35 0.000139 0.000998
GO:0043436 oxoacid metabolic process 5.49% (5/91) 3.35 0.000139 0.000998
GO:0016070 RNA metabolic process 5.49% (5/91) 3.32 0.000154 0.001037
GO:0006082 organic acid metabolic process 5.49% (5/91) 3.24 0.000201 0.001278
GO:0035639 purine ribonucleoside triphosphate binding 12.09% (11/91) 1.86 0.00022 0.001317
GO:0006139 nucleobase-containing compound metabolic process 6.59% (6/91) 2.74 0.000299 0.001701
GO:0030554 adenyl nucleotide binding 12.09% (11/91) 1.7 0.000584 0.002866
GO:0032559 adenyl ribonucleotide binding 12.09% (11/91) 1.7 0.000576 0.002963
GO:0046483 heterocycle metabolic process 6.59% (6/91) 2.56 0.000571 0.003081
GO:0006725 cellular aromatic compound metabolic process 6.59% (6/91) 2.51 0.000677 0.003181
GO:1901360 organic cyclic compound metabolic process 6.59% (6/91) 2.43 0.000914 0.004112
GO:0044281 small molecule metabolic process 5.49% (5/91) 2.67 0.001198 0.005174
GO:0017076 purine nucleotide binding 12.09% (11/91) 1.55 0.001335 0.005339
GO:0032555 purine ribonucleotide binding 12.09% (11/91) 1.55 0.001308 0.005434
GO:0032553 ribonucleotide binding 12.09% (11/91) 1.53 0.001438 0.005548
GO:0097367 carbohydrate derivative binding 12.09% (11/91) 1.52 0.001522 0.005669
GO:0016859 cis-trans isomerase activity 2.2% (2/91) 4.71 0.002708 0.008862
GO:0003755 peptidyl-prolyl cis-trans isomerase activity 2.2% (2/91) 4.71 0.002708 0.008862
GO:1901265 nucleoside phosphate binding 12.09% (11/91) 1.43 0.002579 0.008987
GO:0000166 nucleotide binding 12.09% (11/91) 1.43 0.002579 0.008987
GO:0034641 cellular nitrogen compound metabolic process 6.59% (6/91) 2.08 0.003029 0.009346
GO:0043168 anion binding 12.09% (11/91) 1.4 0.00295 0.009371
GO:0036094 small molecule binding 12.09% (11/91) 1.36 0.003573 0.010718
GO:0003910 DNA ligase (ATP) activity 1.1% (1/91) 6.93 0.008167 0.022615
GO:0003909 DNA ligase activity 1.1% (1/91) 6.93 0.008167 0.022615
GO:0016886 ligase activity, forming phosphoric ester bonds 1.1% (1/91) 6.93 0.008167 0.022615
GO:0097159 organic cyclic compound binding 16.48% (15/91) 0.95 0.00971 0.025577
GO:1901363 heterocyclic compound binding 16.48% (15/91) 0.95 0.00971 0.025577
GO:0006310 DNA recombination 1.1% (1/91) 6.52 0.010874 0.027962
GO:0003676 nucleic acid binding 7.69% (7/91) 1.43 0.015408 0.038699
GO:0043167 ion binding 14.29% (13/91) 0.94 0.017557 0.042138
GO:0016853 isomerase activity 2.2% (2/91) 3.32 0.017413 0.042741
GO:0016459 myosin complex 1.1% (1/91) 5.61 0.020293 0.047645
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_159 0.019 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_172 0.026 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_248 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_258 0.029 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_198 0.019 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_36 0.031 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_37 0.02 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_111 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_58 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_143 0.03 Archaeplastida Compare
Gingko biloba HCCA Cluster_293 0.026 Archaeplastida Compare
Gingko biloba HCCA Cluster_301 0.021 Archaeplastida Compare
Gingko biloba HCCA Cluster_340 0.022 Archaeplastida Compare
Gingko biloba HCCA Cluster_341 0.032 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_64 0.02 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_81 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_57 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_109 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_134 0.023 Archaeplastida Compare
Oryza sativa HCCA Cluster_172 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_210 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_257 0.02 Archaeplastida Compare
Oryza sativa HCCA Cluster_324 0.029 Archaeplastida Compare
Oryza sativa HCCA Cluster_380 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_144 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_203 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_210 0.024 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_230 0.019 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_275 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_306 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_224 0.022 Archaeplastida Compare
Picea abies HCCA Cluster_260 0.027 Archaeplastida Compare
Picea abies HCCA Cluster_270 0.021 Archaeplastida Compare
Picea abies HCCA Cluster_408 0.047 Archaeplastida Compare
Picea abies HCCA Cluster_450 0.029 Archaeplastida Compare
Picea abies HCCA Cluster_536 0.02 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_85 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_147 0.023 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_175 0.022 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_119 0.033 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_171 0.023 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_199 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_229 0.028 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_255 0.021 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_282 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_57 0.022 Archaeplastida Compare
Vitis vinifera HCCA Cluster_101 0.03 Archaeplastida Compare
Vitis vinifera HCCA Cluster_173 0.02 Archaeplastida Compare
Vitis vinifera HCCA Cluster_212 0.025 Archaeplastida Compare
Vitis vinifera HCCA Cluster_244 0.032 Archaeplastida Compare
Zea mays HCCA Cluster_13 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_140 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_162 0.02 Archaeplastida Compare
Zea mays HCCA Cluster_295 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_325 0.023 Archaeplastida Compare
Zea mays HCCA Cluster_339 0.019 Archaeplastida Compare
Zea mays HCCA Cluster_358 0.021 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_177 0.015 LandPlants Compare
Amborella trichopoda HCCA Cluster_248 0.021 LandPlants Compare
Amborella trichopoda HCCA Cluster_258 0.029 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_58 0.015 LandPlants Compare
Arabidopsis thaliana HCCA Cluster_181 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_143 0.025 LandPlants Compare
Gingko biloba HCCA Cluster_301 0.02 LandPlants Compare
Gingko biloba HCCA Cluster_341 0.025 LandPlants Compare
Marchantia polymorpha HCCA Cluster_81 0.022 LandPlants Compare
Oryza sativa HCCA Cluster_54 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_134 0.023 LandPlants Compare
Oryza sativa HCCA Cluster_172 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_210 0.015 LandPlants Compare
Oryza sativa HCCA Cluster_324 0.02 LandPlants Compare
Oryza sativa HCCA Cluster_380 0.015 LandPlants Compare
Physcomitrella patens HCCA Cluster_144 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_203 0.017 LandPlants Compare
Physcomitrella patens HCCA Cluster_210 0.019 LandPlants Compare
Physcomitrella patens HCCA Cluster_275 0.029 LandPlants Compare
Physcomitrella patens HCCA Cluster_306 0.021 LandPlants Compare
Picea abies HCCA Cluster_408 0.022 LandPlants Compare
Picea abies HCCA Cluster_539 0.015 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_85 0.023 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_122 0.016 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_175 0.014 LandPlants Compare
Solanum lycopersicum HCCA Cluster_119 0.033 LandPlants Compare
Solanum lycopersicum HCCA Cluster_199 0.02 LandPlants Compare
Solanum lycopersicum HCCA Cluster_229 0.016 LandPlants Compare
Solanum lycopersicum HCCA Cluster_255 0.021 LandPlants Compare
Vitis vinifera HCCA Cluster_101 0.019 LandPlants Compare
Vitis vinifera HCCA Cluster_173 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_189 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_244 0.024 LandPlants Compare
Zea mays HCCA Cluster_102 0.017 LandPlants Compare
Zea mays HCCA Cluster_140 0.015 LandPlants Compare
Zea mays HCCA Cluster_295 0.016 LandPlants Compare
Zea mays HCCA Cluster_325 0.015 LandPlants Compare
Zea mays HCCA Cluster_358 0.021 LandPlants Compare
Amborella trichopoda HCCA Cluster_177 0.015 SeedPlants Compare
Amborella trichopoda HCCA Cluster_220 0.013 SeedPlants Compare
Amborella trichopoda HCCA Cluster_241 0.013 SeedPlants Compare
Amborella trichopoda HCCA Cluster_248 0.016 SeedPlants Compare
Amborella trichopoda HCCA Cluster_258 0.029 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_58 0.015 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_138 0.012 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_141 0.013 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_181 0.016 SeedPlants Compare
Arabidopsis thaliana HCCA Cluster_199 0.012 SeedPlants Compare
Gingko biloba HCCA Cluster_58 0.012 SeedPlants Compare
Gingko biloba HCCA Cluster_143 0.025 SeedPlants Compare
Gingko biloba HCCA Cluster_202 0.013 SeedPlants Compare
Gingko biloba HCCA Cluster_301 0.02 SeedPlants Compare
Gingko biloba HCCA Cluster_340 0.014 SeedPlants Compare
Gingko biloba HCCA Cluster_341 0.019 SeedPlants Compare
Oryza sativa HCCA Cluster_52 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_54 0.017 SeedPlants Compare
Oryza sativa HCCA Cluster_134 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_172 0.018 SeedPlants Compare
Oryza sativa HCCA Cluster_176 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_185 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_210 0.015 SeedPlants Compare
Oryza sativa HCCA Cluster_257 0.013 SeedPlants Compare
Oryza sativa HCCA Cluster_324 0.02 SeedPlants Compare
Oryza sativa HCCA Cluster_380 0.014 SeedPlants Compare
Picea abies HCCA Cluster_34 0.012 SeedPlants Compare
Picea abies HCCA Cluster_260 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_119 0.026 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_161 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_171 0.013 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_197 0.014 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_199 0.02 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_229 0.015 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_255 0.021 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_277 0.012 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_282 0.013 SeedPlants Compare
Vitis vinifera HCCA Cluster_4 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_88 0.013 SeedPlants Compare
Vitis vinifera HCCA Cluster_101 0.019 SeedPlants Compare
Vitis vinifera HCCA Cluster_189 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_244 0.024 SeedPlants Compare
Zea mays HCCA Cluster_102 0.017 SeedPlants Compare
Zea mays HCCA Cluster_162 0.013 SeedPlants Compare
Zea mays HCCA Cluster_288 0.013 SeedPlants Compare
Zea mays HCCA Cluster_293 0.012 SeedPlants Compare
Zea mays HCCA Cluster_295 0.016 SeedPlants Compare
Zea mays HCCA Cluster_318 0.013 SeedPlants Compare
Zea mays HCCA Cluster_354 0.014 SeedPlants Compare
Zea mays HCCA Cluster_358 0.021 SeedPlants Compare
Sequences (91) (download table)

InterPro Domains

GO Terms

Family Terms