Coexpression cluster: Cluster_130 (HCCA)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009507 chloroplast 96.36% (53/55) 2.83 0.0 0.0
GO:0009536 plastid 96.36% (53/55) 2.8 0.0 0.0
GO:0009526 plastid envelope 54.55% (30/55) 4.8 0.0 0.0
GO:0009941 chloroplast envelope 54.55% (30/55) 4.81 0.0 0.0
GO:0003735 structural constituent of ribosome 49.09% (27/55) 5.24 0.0 0.0
GO:0006412 translation 49.09% (27/55) 5.22 0.0 0.0
GO:0043043 peptide biosynthetic process 49.09% (27/55) 5.2 0.0 0.0
GO:0006518 peptide metabolic process 49.09% (27/55) 5.15 0.0 0.0
GO:0009570 chloroplast stroma 54.55% (30/55) 4.68 0.0 0.0
GO:0009532 plastid stroma 54.55% (30/55) 4.68 0.0 0.0
GO:0031975 envelope 54.55% (30/55) 4.65 0.0 0.0
GO:0031967 organelle envelope 54.55% (30/55) 4.65 0.0 0.0
GO:0043604 amide biosynthetic process 49.09% (27/55) 5.11 0.0 0.0
GO:0005198 structural molecule activity 49.09% (27/55) 4.91 0.0 0.0
GO:0043603 cellular amide metabolic process 49.09% (27/55) 4.79 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 60.0% (33/55) 3.7 0.0 0.0
GO:0019682 glyceraldehyde-3-phosphate metabolic process 38.18% (21/55) 5.53 0.0 0.0
GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway 38.18% (21/55) 5.53 0.0 0.0
GO:0009059 macromolecule biosynthetic process 61.82% (34/55) 3.55 0.0 0.0
GO:0009240 isopentenyl diphosphate biosynthetic process 38.18% (21/55) 5.51 0.0 0.0
GO:0046490 isopentenyl diphosphate metabolic process 38.18% (21/55) 5.51 0.0 0.0
GO:0044249 cellular biosynthetic process 80.0% (44/55) 2.66 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 58.18% (32/55) 3.71 0.0 0.0
GO:1901576 organic substance biosynthetic process 80.0% (44/55) 2.5 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 58.18% (32/55) 3.51 0.0 0.0
GO:0009058 biosynthetic process 80.0% (44/55) 2.46 0.0 0.0
GO:0006081 cellular aldehyde metabolic process 38.18% (21/55) 5.02 0.0 0.0
GO:0008654 phospholipid biosynthetic process 38.18% (21/55) 4.78 0.0 0.0
GO:0006644 phospholipid metabolic process 38.18% (21/55) 4.69 0.0 0.0
GO:0006090 pyruvate metabolic process 38.18% (21/55) 4.67 0.0 0.0
GO:0005840 ribosome 34.55% (19/55) 4.85 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 63.64% (35/55) 2.57 0.0 0.0
GO:0034357 photosynthetic membrane 30.91% (17/55) 4.7 0.0 0.0
GO:0042651 thylakoid membrane 30.91% (17/55) 4.7 0.0 0.0
GO:0090407 organophosphate biosynthetic process 38.18% (21/55) 3.85 0.0 0.0
GO:0044238 primary metabolic process 80.0% (44/55) 1.81 0.0 0.0
GO:0009535 chloroplast thylakoid membrane 29.09% (16/55) 4.67 0.0 0.0
GO:0055035 plastid thylakoid membrane 29.09% (16/55) 4.67 0.0 0.0
GO:0044237 cellular metabolic process 81.82% (45/55) 1.69 0.0 0.0
GO:1901135 carbohydrate derivative metabolic process 41.82% (23/55) 3.39 0.0 0.0
GO:0043170 macromolecule metabolic process 69.09% (38/55) 2.07 0.0 0.0
GO:0019637 organophosphate metabolic process 41.82% (23/55) 3.34 0.0 0.0
GO:0071704 organic substance metabolic process 81.82% (45/55) 1.63 0.0 0.0
GO:0044267 cellular protein metabolic process 49.09% (27/55) 2.84 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 34.55% (19/55) 3.79 0.0 0.0
GO:0043228 non-membrane-bounded organelle 34.55% (19/55) 3.79 0.0 0.0
GO:0009579 thylakoid 27.27% (15/55) 4.53 0.0 0.0
GO:0009668 plastid membrane organization 23.64% (13/55) 5.05 0.0 0.0
GO:0010027 thylakoid membrane organization 23.64% (13/55) 5.05 0.0 0.0
GO:0044260 cellular macromolecule metabolic process 60.0% (33/55) 2.27 0.0 0.0
GO:0061024 membrane organization 23.64% (13/55) 4.96 0.0 0.0
GO:0071840 cellular component organization or biogenesis 54.55% (30/55) 2.43 0.0 0.0
GO:0008152 metabolic process 81.82% (45/55) 1.52 0.0 0.0
GO:0008610 lipid biosynthetic process 38.18% (21/55) 3.31 0.0 0.0
GO:0009657 plastid organization 25.45% (14/55) 4.54 0.0 0.0
GO:0032787 monocarboxylic acid metabolic process 40.0% (22/55) 3.09 0.0 0.0
GO:0044255 cellular lipid metabolic process 38.18% (21/55) 3.2 0.0 0.0
GO:0006807 nitrogen compound metabolic process 67.27% (37/55) 1.87 0.0 0.0
GO:0006796 phosphate-containing compound metabolic process 41.82% (23/55) 2.81 0.0 0.0
GO:0006793 phosphorus metabolic process 41.82% (23/55) 2.79 0.0 0.0
GO:0010207 photosystem II assembly 20.0% (11/55) 4.97 0.0 0.0
GO:0019538 protein metabolic process 49.09% (27/55) 2.38 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 58.18% (32/55) 2.02 0.0 0.0
GO:0009987 cellular process 85.45% (47/55) 1.22 0.0 0.0
GO:0006629 lipid metabolic process 38.18% (21/55) 2.86 0.0 0.0
GO:0006082 organic acid metabolic process 41.82% (23/55) 2.61 0.0 0.0
GO:0016043 cellular component organization 47.27% (26/55) 2.34 0.0 0.0
GO:0044391 ribosomal subunit 21.82% (12/55) 4.37 0.0 0.0
GO:0019752 carboxylic acid metabolic process 40.0% (22/55) 2.68 0.0 0.0
GO:0042254 ribosome biogenesis 16.36% (9/55) 5.43 0.0 0.0
GO:0022613 ribonucleoprotein complex biogenesis 16.36% (9/55) 5.35 0.0 0.0
GO:0043436 oxoacid metabolic process 40.0% (22/55) 2.6 0.0 0.0
GO:1990904 ribonucleoprotein complex 21.82% (12/55) 4.12 0.0 0.0
GO:0032544 plastid translation 9.09% (5/55) 7.97 0.0 0.0
GO:0015934 large ribosomal subunit 16.36% (9/55) 4.82 0.0 0.0
GO:0006364 rRNA processing 18.18% (10/55) 4.43 0.0 0.0
GO:0016072 rRNA metabolic process 18.18% (10/55) 4.43 0.0 0.0
GO:0034660 ncRNA metabolic process 20.0% (11/55) 4.01 0.0 0.0
GO:0034622 cellular protein-containing complex assembly 21.82% (12/55) 3.73 0.0 0.0
GO:0022607 cellular component assembly 27.27% (15/55) 3.13 0.0 0.0
GO:0034470 ncRNA processing 18.18% (10/55) 4.23 0.0 0.0
GO:0065003 protein-containing complex assembly 21.82% (12/55) 3.67 0.0 0.0
GO:0000311 plastid large ribosomal subunit 9.09% (5/55) 7.21 0.0 0.0
GO:0043933 protein-containing complex subunit organization 21.82% (12/55) 3.64 0.0 0.0
GO:0044281 small molecule metabolic process 41.82% (23/55) 2.14 0.0 0.0
GO:0032774 RNA biosynthetic process 18.18% (10/55) 4.06 0.0 0.0
GO:0043231 intracellular membrane-bounded organelle 96.36% (53/55) 0.68 0.0 0.0
GO:0043227 membrane-bounded organelle 96.36% (53/55) 0.68 0.0 0.0
GO:0018130 heterocycle biosynthetic process 27.27% (15/55) 2.95 0.0 0.0
GO:0000315 organellar large ribosomal subunit 9.09% (5/55) 6.9 0.0 0.0
GO:0043229 intracellular organelle 96.36% (53/55) 0.67 0.0 0.0
GO:0043226 organelle 96.36% (53/55) 0.67 0.0 0.0
GO:0005622 intracellular anatomical structure 96.36% (53/55) 0.67 0.0 0.0
GO:0016070 RNA metabolic process 30.91% (17/55) 2.63 0.0 0.0
GO:0006098 pentose-phosphate shunt 14.55% (8/55) 4.51 0.0 0.0
GO:0051156 glucose 6-phosphate metabolic process 14.55% (8/55) 4.47 0.0 0.0
GO:0006740 NADPH regeneration 14.55% (8/55) 4.46 0.0 0.0
GO:0006739 NADP metabolic process 14.55% (8/55) 4.43 0.0 0.0
GO:0006354 DNA-templated transcription, elongation 12.73% (7/55) 4.83 0.0 0.0
GO:0072596 establishment of protein localization to chloroplast 10.91% (6/55) 5.41 0.0 0.0
GO:0045036 protein targeting to chloroplast 10.91% (6/55) 5.41 0.0 0.0
GO:0042793 plastid transcription 10.91% (6/55) 5.41 0.0 0.0
GO:0072598 protein localization to chloroplast 10.91% (6/55) 5.41 0.0 0.0
GO:0044085 cellular component biogenesis 16.36% (9/55) 3.94 0.0 0.0
GO:0019438 aromatic compound biosynthetic process 27.27% (15/55) 2.6 0.0 0.0
GO:1901362 organic cyclic compound biosynthetic process 29.09% (16/55) 2.45 0.0 0.0
GO:1902680 positive regulation of RNA biosynthetic process 18.18% (10/55) 3.48 0.0 0.0
GO:0051254 positive regulation of RNA metabolic process 18.18% (10/55) 3.48 0.0 0.0
GO:0045893 positive regulation of transcription, DNA-templated 18.18% (10/55) 3.48 0.0 0.0
GO:1903508 positive regulation of nucleic acid-templated transcription 18.18% (10/55) 3.48 0.0 0.0
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 18.18% (10/55) 3.46 0.0 0.0
GO:0006091 generation of precursor metabolites and energy 20.0% (11/55) 3.2 0.0 0.0
GO:0010557 positive regulation of macromolecule biosynthetic process 18.18% (10/55) 3.39 0.0 0.0
GO:0031328 positive regulation of cellular biosynthetic process 18.18% (10/55) 3.37 0.0 0.0
GO:0051173 positive regulation of nitrogen compound metabolic process 18.18% (10/55) 3.37 0.0 0.0
GO:0010604 positive regulation of macromolecule metabolic process 18.18% (10/55) 3.33 0.0 0.0
GO:0009773 photosynthetic electron transport in photosystem I 9.09% (5/55) 5.65 0.0 0.0
GO:0031325 positive regulation of cellular metabolic process 18.18% (10/55) 3.32 0.0 0.0
GO:0009902 chloroplast relocation 10.91% (6/55) 4.87 0.0 0.0
GO:0051667 establishment of plastid localization 10.91% (6/55) 4.87 0.0 0.0
GO:0090304 nucleic acid metabolic process 30.91% (17/55) 2.21 0.0 0.0
GO:0019750 chloroplast localization 10.91% (6/55) 4.86 0.0 0.0
GO:0051644 plastid localization 10.91% (6/55) 4.86 0.0 0.0
GO:0051656 establishment of organelle localization 10.91% (6/55) 4.83 0.0 0.0
GO:0009735 response to cytokinin 12.73% (7/55) 4.14 0.0 1e-06
GO:0009767 photosynthetic electron transport chain 9.09% (5/55) 5.27 0.0 1e-06
GO:0009891 positive regulation of biosynthetic process 18.18% (10/55) 3.1 0.0 1e-06
GO:0034654 nucleobase-containing compound biosynthetic process 18.18% (10/55) 3.05 0.0 1e-06
GO:0006996 organelle organization 25.45% (14/55) 2.38 0.0 1e-06
GO:0032991 protein-containing complex 25.45% (14/55) 2.38 0.0 1e-06
GO:0006396 RNA processing 20.0% (11/55) 2.82 0.0 1e-06
GO:0009893 positive regulation of metabolic process 18.18% (10/55) 3.02 0.0 1e-06
GO:0046483 heterocycle metabolic process 34.55% (19/55) 1.78 1e-06 3e-06
GO:0022900 electron transport chain 9.09% (5/55) 4.79 1e-06 4e-06
GO:0051640 organelle localization 10.91% (6/55) 4.1 1e-06 5e-06
GO:0006351 transcription, DNA-templated 10.91% (6/55) 4.1 1e-06 5e-06
GO:0097659 nucleic acid-templated transcription 10.91% (6/55) 4.1 1e-06 5e-06
GO:1901360 organic cyclic compound metabolic process 36.36% (20/55) 1.63 2e-06 7e-06
GO:0006139 nucleobase-containing compound metabolic process 30.91% (17/55) 1.83 2e-06 8e-06
GO:0048522 positive regulation of cellular process 18.18% (10/55) 2.71 2e-06 8e-06
GO:0016020 membrane 43.64% (24/55) 1.36 3e-06 1.1e-05
GO:0006725 cellular aromatic compound metabolic process 34.55% (19/55) 1.62 4e-06 1.4e-05
GO:0009658 chloroplast organization 10.91% (6/55) 3.69 7e-06 2.3e-05
GO:0035304 regulation of protein dephosphorylation 9.09% (5/55) 4.18 8e-06 2.8e-05
GO:0035303 regulation of dephosphorylation 9.09% (5/55) 4.17 9e-06 2.9e-05
GO:0051649 establishment of localization in cell 20.0% (11/55) 2.31 1e-05 3.3e-05
GO:0048518 positive regulation of biological process 18.18% (10/55) 2.39 1.7e-05 5.4e-05
GO:0051641 cellular localization 20.0% (11/55) 2.18 2.4e-05 7.5e-05
GO:0051174 regulation of phosphorus metabolic process 9.09% (5/55) 3.68 4.4e-05 0.000139
GO:0019220 regulation of phosphate metabolic process 9.09% (5/55) 3.68 4.4e-05 0.000139
GO:0031163 metallo-sulfur cluster assembly 7.27% (4/55) 4.34 4.6e-05 0.000142
GO:0016226 iron-sulfur cluster assembly 7.27% (4/55) 4.34 4.6e-05 0.000142
GO:0031399 regulation of protein modification process 9.09% (5/55) 3.64 5e-05 0.000154
GO:0032268 regulation of cellular protein metabolic process 9.09% (5/55) 3.21 0.000207 0.000632
GO:0051246 regulation of protein metabolic process 9.09% (5/55) 3.18 0.000228 0.000694
GO:0000023 maltose metabolic process 7.27% (4/55) 3.73 0.000241 0.000726
GO:0072594 establishment of protein localization to organelle 10.91% (6/55) 2.69 0.000323 0.00097
GO:0033365 protein localization to organelle 10.91% (6/55) 2.68 0.000334 0.000997
GO:0006790 sulfur compound metabolic process 12.73% (7/55) 2.32 0.000476 0.001411
GO:0000312 plastid small ribosomal subunit 3.64% (2/55) 5.89 0.000518 0.001525
GO:0019252 starch biosynthetic process 7.27% (4/55) 3.43 0.000527 0.001543
GO:0008150 biological_process 92.73% (51/55) 0.31 0.000564 0.001638
GO:0022626 cytosolic ribosome 7.27% (4/55) 3.38 0.000594 0.001705
GO:0005984 disaccharide metabolic process 7.27% (4/55) 3.38 0.000594 0.001705
GO:0009311 oligosaccharide metabolic process 7.27% (4/55) 3.26 0.000814 0.002323
GO:0009534 chloroplast thylakoid 7.27% (4/55) 3.25 0.000843 0.002378
GO:0031976 plastid thylakoid 7.27% (4/55) 3.25 0.000843 0.002378
GO:0009073 aromatic amino acid family biosynthetic process 5.45% (3/55) 4.0 0.000878 0.002461
GO:0005982 starch metabolic process 7.27% (4/55) 3.15 0.001069 0.002978
GO:0000314 organellar small ribosomal subunit 3.64% (2/55) 5.33 0.001131 0.003134
GO:0009072 aromatic amino acid family metabolic process 7.27% (4/55) 3.13 0.00114 0.00314
GO:0110165 cellular anatomical entity 98.18% (54/55) 0.21 0.001216 0.003329
GO:0015995 chlorophyll biosynthetic process 5.45% (3/55) 3.78 0.001382 0.003762
GO:0051741 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity 1.82% (1/55) 8.97 0.001989 0.005353
GO:0090391 granum assembly 1.82% (1/55) 8.97 0.001989 0.005353
GO:0015935 small ribosomal subunit 5.45% (3/55) 3.51 0.002326 0.006225
GO:0009250 glucan biosynthetic process 7.27% (4/55) 2.83 0.002399 0.006385
GO:0045184 establishment of protein localization 12.73% (7/55) 1.91 0.002497 0.006533
GO:0015031 protein transport 12.73% (7/55) 1.91 0.002497 0.006533
GO:0006779 porphyrin-containing compound biosynthetic process 5.45% (3/55) 3.48 0.002479 0.006561
GO:0008104 protein localization 12.73% (7/55) 1.89 0.002665 0.006934
GO:0033014 tetrapyrrole biosynthetic process 5.45% (3/55) 3.44 0.002693 0.006969
GO:0010103 stomatal complex morphogenesis 5.45% (3/55) 3.43 0.002748 0.006997
GO:0090626 plant epidermis morphogenesis 5.45% (3/55) 3.43 0.002748 0.006997
GO:0051171 regulation of nitrogen compound metabolic process 20.0% (11/55) 1.38 0.002742 0.007057
GO:0051234 establishment of localization 23.64% (13/55) 1.2 0.003187 0.008071
GO:1905392 plant organ morphogenesis 7.27% (4/55) 2.71 0.003255 0.008198
GO:0006605 protein targeting 10.91% (6/55) 2.02 0.003538 0.008589
GO:2001141 regulation of RNA biosynthetic process 18.18% (10/55) 1.42 0.003508 0.008605
GO:0044283 small molecule biosynthetic process 14.55% (8/55) 1.66 0.003536 0.008629
GO:0016053 organic acid biosynthetic process 12.73% (7/55) 1.82 0.003501 0.008632
GO:1903506 regulation of nucleic acid-templated transcription 18.18% (10/55) 1.43 0.003494 0.008662
GO:0006355 regulation of transcription, DNA-templated 18.18% (10/55) 1.43 0.003494 0.008662
GO:0009706 chloroplast inner membrane 3.64% (2/55) 4.51 0.003482 0.008724
GO:0051252 regulation of RNA metabolic process 18.18% (10/55) 1.41 0.003714 0.00897
GO:0033036 macromolecule localization 12.73% (7/55) 1.8 0.003799 0.00913
GO:0009547 plastid ribosome 1.82% (1/55) 7.97 0.003974 0.009405
GO:0000313 organellar ribosome 1.82% (1/55) 7.97 0.003974 0.009405
GO:0009528 plastid inner membrane 3.64% (2/55) 4.42 0.003964 0.009477
GO:0009295 nucleoid 3.64% (2/55) 4.39 0.004131 0.009729
GO:0080090 regulation of primary metabolic process 20.0% (11/55) 1.29 0.004476 0.010488
GO:0019219 regulation of nucleobase-containing compound metabolic process 18.18% (10/55) 1.37 0.00452 0.010539
GO:0015833 peptide transport 12.73% (7/55) 1.75 0.004572 0.010608
GO:0042886 amide transport 12.73% (7/55) 1.74 0.004764 0.010999
GO:0015994 chlorophyll metabolic process 5.45% (3/55) 3.14 0.004814 0.011061
GO:0010556 regulation of macromolecule biosynthetic process 18.18% (10/55) 1.33 0.005634 0.012819
GO:2000112 regulation of cellular macromolecule biosynthetic process 18.18% (10/55) 1.33 0.005614 0.012836
GO:0051179 localization 23.64% (13/55) 1.1 0.005812 0.01316
GO:0033281 TAT protein transport complex 1.82% (1/55) 7.39 0.005955 0.013356
GO:0051087 chaperone binding 1.82% (1/55) 7.39 0.005955 0.013356
GO:0034613 cellular protein localization 10.91% (6/55) 1.86 0.006064 0.013471
GO:0042742 defense response to bacterium 7.27% (4/55) 2.46 0.006052 0.01351
GO:0031323 regulation of cellular metabolic process 20.0% (11/55) 1.22 0.006263 0.013785
GO:0009965 leaf morphogenesis 5.45% (3/55) 3.0 0.006258 0.013838
GO:0015979 photosynthesis 5.45% (3/55) 3.0 0.00635 0.013911
GO:0006073 cellular glucan metabolic process 7.27% (4/55) 2.43 0.006465 0.014031
GO:0044042 glucan metabolic process 7.27% (4/55) 2.43 0.006465 0.014031
GO:0031326 regulation of cellular biosynthetic process 18.18% (10/55) 1.29 0.006637 0.014339
GO:0060255 regulation of macromolecule metabolic process 20.0% (11/55) 1.2 0.007043 0.015079
GO:0006655 phosphatidylglycerol biosynthetic process 3.64% (2/55) 4.0 0.007018 0.015093
GO:0046471 phosphatidylglycerol metabolic process 3.64% (2/55) 3.97 0.007235 0.015419
GO:0006778 porphyrin-containing compound metabolic process 5.45% (3/55) 2.92 0.007417 0.015665
GO:0070727 cellular macromolecule localization 10.91% (6/55) 1.8 0.007407 0.015715
GO:0033013 tetrapyrrole metabolic process 5.45% (3/55) 2.9 0.007621 0.016025
GO:0006886 intracellular protein transport 10.91% (6/55) 1.75 0.008593 0.017988
GO:0009889 regulation of biosynthetic process 18.18% (10/55) 1.22 0.009407 0.019605
GO:0098542 defense response to other organism 10.91% (6/55) 1.7 0.010109 0.020976
GO:0031969 chloroplast membrane 3.64% (2/55) 3.71 0.010329 0.021338
GO:0010468 regulation of gene expression 18.18% (10/55) 1.19 0.010828 0.022271
GO:0010236 plastoquinone biosynthetic process 1.82% (1/55) 6.39 0.011875 0.024317
GO:0009725 response to hormone 12.73% (7/55) 1.48 0.01201 0.024488
GO:0046148 pigment biosynthetic process 5.45% (3/55) 2.65 0.01229 0.024843
GO:0009719 response to endogenous stimulus 12.73% (7/55) 1.48 0.012255 0.02488
GO:0005575 cellular_component 98.18% (54/55) 0.14 0.01285 0.025645
GO:0042170 plastid membrane 3.64% (2/55) 3.55 0.012757 0.025677
GO:0031984 organelle subcompartment 7.27% (4/55) 2.14 0.012836 0.025726
GO:0010189 vitamin E biosynthetic process 1.82% (1/55) 6.17 0.01384 0.02739
GO:0042360 vitamin E metabolic process 1.82% (1/55) 6.17 0.01384 0.02739
GO:0033692 cellular polysaccharide biosynthetic process 7.27% (4/55) 2.08 0.01471 0.028988
GO:0042362 fat-soluble vitamin biosynthetic process 1.82% (1/55) 5.97 0.015802 0.030255
GO:0009840 chloroplastic endopeptidase Clp complex 1.82% (1/55) 5.97 0.015802 0.030255
GO:0010190 cytochrome b6f complex assembly 1.82% (1/55) 5.97 0.015802 0.030255
GO:0006775 fat-soluble vitamin metabolic process 1.82% (1/55) 5.97 0.015802 0.030255
GO:0009368 endopeptidase Clp complex 1.82% (1/55) 5.97 0.015802 0.030255
GO:0009617 response to bacterium 7.27% (4/55) 2.06 0.015441 0.030304
GO:0046907 intracellular transport 10.91% (6/55) 1.56 0.015664 0.030612
GO:0019222 regulation of metabolic process 20.0% (11/55) 1.01 0.017506 0.033381
GO:0022627 cytosolic small ribosomal subunit 3.64% (2/55) 3.27 0.018273 0.034704
GO:0034637 cellular carbohydrate biosynthetic process 7.27% (4/55) 1.98 0.018598 0.035179
GO:0009793 embryo development ending in seed dormancy 7.27% (4/55) 1.93 0.020825 0.039077
GO:0009790 embryo development 7.27% (4/55) 1.93 0.020825 0.039077
GO:0090698 post-embryonic plant morphogenesis 5.45% (3/55) 2.33 0.021711 0.039944
GO:0000036 acyl carrier activity 1.82% (1/55) 5.51 0.021664 0.040015
GO:0140414 phosphopantetheine-dependent carrier activity 1.82% (1/55) 5.51 0.021664 0.040015
GO:0051192 prosthetic group binding 1.82% (1/55) 5.51 0.021664 0.040015
GO:0044620 ACP phosphopantetheine attachment site binding 1.82% (1/55) 5.51 0.021664 0.040015
GO:0016556 mRNA modification 3.64% (2/55) 3.13 0.022056 0.040422
GO:0042440 pigment metabolic process 5.45% (3/55) 2.32 0.022472 0.041025
GO:0009653 anatomical structure morphogenesis 10.91% (6/55) 1.42 0.023788 0.043258
GO:0022625 cytosolic large ribosomal subunit 3.64% (2/55) 3.06 0.024244 0.04392
GO:0000271 polysaccharide biosynthetic process 7.27% (4/55) 1.84 0.02561 0.046217
GO:0044264 cellular polysaccharide metabolic process 7.27% (4/55) 1.83 0.026049 0.046829
GO:0019866 organelle inner membrane 3.64% (2/55) 2.96 0.027295 0.048881
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Amborella trichopoda HCCA Cluster_57 0.037 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_107 0.065 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_122 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_170 0.025 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_221 0.037 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_261 0.021 Archaeplastida Compare
Arabidopsis thaliana HCCA Cluster_7 0.028 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_4 0.025 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_34 0.141 Archaeplastida Compare
Chlamydomonas reinhardtii HCCA Cluster_57 0.029 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_76 0.02 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_126 0.026 Archaeplastida Compare
Cyanophora paradoxa HCCA Cluster_142 0.024 Archaeplastida Compare
Gingko biloba HCCA Cluster_81 0.092 Archaeplastida Compare
Gingko biloba HCCA Cluster_238 0.061 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_7 0.03 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_35 0.257 Archaeplastida Compare
Marchantia polymorpha HCCA Cluster_59 0.03 Archaeplastida Compare
Oryza sativa HCCA Cluster_82 0.159 Archaeplastida Compare
Oryza sativa HCCA Cluster_127 0.019 Archaeplastida Compare
Oryza sativa HCCA Cluster_217 0.043 Archaeplastida Compare
Oryza sativa HCCA Cluster_328 0.025 Archaeplastida Compare
Oryza sativa HCCA Cluster_359 0.029 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_2 0.353 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_23 0.03 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_25 0.065 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_149 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_167 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_172 0.025 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_187 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_201 0.072 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_223 0.035 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_249 0.048 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_282 0.02 Archaeplastida Compare
Physcomitrella patens HCCA Cluster_307 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_4 0.036 Archaeplastida Compare
Picea abies HCCA Cluster_84 0.02 Archaeplastida Compare
Picea abies HCCA Cluster_322 0.097 Archaeplastida Compare
Picea abies HCCA Cluster_342 0.056 Archaeplastida Compare
Picea abies HCCA Cluster_417 0.032 Archaeplastida Compare
Picea abies HCCA Cluster_447 0.024 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_9 0.044 Archaeplastida Compare
Selaginella moellendorffii HCCA Cluster_62 0.041 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_115 0.02 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_133 0.079 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_148 0.14 Archaeplastida Compare
Solanum lycopersicum HCCA Cluster_170 0.116 Archaeplastida Compare
Vitis vinifera HCCA Cluster_39 0.028 Archaeplastida Compare
Vitis vinifera HCCA Cluster_61 0.047 Archaeplastida Compare
Vitis vinifera HCCA Cluster_159 0.031 Archaeplastida Compare
Vitis vinifera HCCA Cluster_168 0.019 Archaeplastida Compare
Vitis vinifera HCCA Cluster_179 0.206 Archaeplastida Compare
Vitis vinifera HCCA Cluster_241 0.021 Archaeplastida Compare
Zea mays HCCA Cluster_14 0.06 Archaeplastida Compare
Zea mays HCCA Cluster_49 0.039 Archaeplastida Compare
Zea mays HCCA Cluster_226 0.027 Archaeplastida Compare
Zea mays HCCA Cluster_320 0.096 Archaeplastida Compare
Zea mays HCCA Cluster_367 0.071 Archaeplastida Compare
Amborella trichopoda HCCA Cluster_57 0.036 LandPlants Compare
Amborella trichopoda HCCA Cluster_107 0.062 LandPlants Compare
Amborella trichopoda HCCA Cluster_122 0.025 LandPlants Compare
Amborella trichopoda HCCA Cluster_170 0.024 LandPlants Compare
Amborella trichopoda HCCA Cluster_221 0.037 LandPlants Compare
Amborella trichopoda HCCA Cluster_246 0.017 LandPlants Compare
Gingko biloba HCCA Cluster_27 0.017 LandPlants Compare
Gingko biloba HCCA Cluster_64 0.016 LandPlants Compare
Gingko biloba HCCA Cluster_81 0.091 LandPlants Compare
Gingko biloba HCCA Cluster_238 0.056 LandPlants Compare
Marchantia polymorpha HCCA Cluster_7 0.03 LandPlants Compare
Marchantia polymorpha HCCA Cluster_35 0.239 LandPlants Compare
Marchantia polymorpha HCCA Cluster_59 0.03 LandPlants Compare
Oryza sativa HCCA Cluster_82 0.151 LandPlants Compare
Oryza sativa HCCA Cluster_127 0.018 LandPlants Compare
Oryza sativa HCCA Cluster_169 0.016 LandPlants Compare
Oryza sativa HCCA Cluster_217 0.034 LandPlants Compare
Oryza sativa HCCA Cluster_328 0.017 LandPlants Compare
Oryza sativa HCCA Cluster_359 0.028 LandPlants Compare
Physcomitrella patens HCCA Cluster_2 0.333 LandPlants Compare
Physcomitrella patens HCCA Cluster_23 0.03 LandPlants Compare
Physcomitrella patens HCCA Cluster_25 0.053 LandPlants Compare
Physcomitrella patens HCCA Cluster_149 0.025 LandPlants Compare
Physcomitrella patens HCCA Cluster_172 0.025 LandPlants Compare
Physcomitrella patens HCCA Cluster_201 0.072 LandPlants Compare
Physcomitrella patens HCCA Cluster_223 0.035 LandPlants Compare
Physcomitrella patens HCCA Cluster_249 0.048 LandPlants Compare
Physcomitrella patens HCCA Cluster_282 0.02 LandPlants Compare
Physcomitrella patens HCCA Cluster_307 0.02 LandPlants Compare
Picea abies HCCA Cluster_4 0.034 LandPlants Compare
Picea abies HCCA Cluster_84 0.019 LandPlants Compare
Picea abies HCCA Cluster_230 0.016 LandPlants Compare
Picea abies HCCA Cluster_322 0.093 LandPlants Compare
Picea abies HCCA Cluster_340 0.017 LandPlants Compare
Picea abies HCCA Cluster_342 0.048 LandPlants Compare
Picea abies HCCA Cluster_417 0.015 LandPlants Compare
Picea abies HCCA Cluster_447 0.023 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_9 0.043 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_62 0.041 LandPlants Compare
Selaginella moellendorffii HCCA Cluster_148 0.015 LandPlants Compare
Solanum lycopersicum HCCA Cluster_115 0.02 LandPlants Compare
Solanum lycopersicum HCCA Cluster_133 0.079 LandPlants Compare
Solanum lycopersicum HCCA Cluster_148 0.14 LandPlants Compare
Solanum lycopersicum HCCA Cluster_170 0.115 LandPlants Compare
Solanum lycopersicum HCCA Cluster_237 0.015 LandPlants Compare
Vitis vinifera HCCA Cluster_39 0.027 LandPlants Compare
Vitis vinifera HCCA Cluster_61 0.046 LandPlants Compare
Vitis vinifera HCCA Cluster_168 0.019 LandPlants Compare
Vitis vinifera HCCA Cluster_179 0.206 LandPlants Compare
Vitis vinifera HCCA Cluster_241 0.021 LandPlants Compare
Zea mays HCCA Cluster_14 0.059 LandPlants Compare
Zea mays HCCA Cluster_49 0.038 LandPlants Compare
Zea mays HCCA Cluster_226 0.026 LandPlants Compare
Zea mays HCCA Cluster_320 0.096 LandPlants Compare
Zea mays HCCA Cluster_367 0.071 LandPlants Compare
Amborella trichopoda HCCA Cluster_16 0.014 SeedPlants Compare
Amborella trichopoda HCCA Cluster_57 0.036 SeedPlants Compare
Amborella trichopoda HCCA Cluster_107 0.062 SeedPlants Compare
Amborella trichopoda HCCA Cluster_122 0.025 SeedPlants Compare
Amborella trichopoda HCCA Cluster_170 0.024 SeedPlants Compare
Amborella trichopoda HCCA Cluster_216 0.013 SeedPlants Compare
Amborella trichopoda HCCA Cluster_221 0.037 SeedPlants Compare
Gingko biloba HCCA Cluster_27 0.017 SeedPlants Compare
Gingko biloba HCCA Cluster_64 0.016 SeedPlants Compare
Gingko biloba HCCA Cluster_81 0.091 SeedPlants Compare
Gingko biloba HCCA Cluster_238 0.052 SeedPlants Compare
Oryza sativa HCCA Cluster_82 0.149 SeedPlants Compare
Oryza sativa HCCA Cluster_159 0.014 SeedPlants Compare
Oryza sativa HCCA Cluster_169 0.016 SeedPlants Compare
Oryza sativa HCCA Cluster_217 0.034 SeedPlants Compare
Oryza sativa HCCA Cluster_328 0.017 SeedPlants Compare
Oryza sativa HCCA Cluster_359 0.028 SeedPlants Compare
Picea abies HCCA Cluster_4 0.03 SeedPlants Compare
Picea abies HCCA Cluster_84 0.012 SeedPlants Compare
Picea abies HCCA Cluster_230 0.016 SeedPlants Compare
Picea abies HCCA Cluster_322 0.093 SeedPlants Compare
Picea abies HCCA Cluster_340 0.017 SeedPlants Compare
Picea abies HCCA Cluster_342 0.047 SeedPlants Compare
Picea abies HCCA Cluster_417 0.015 SeedPlants Compare
Picea abies HCCA Cluster_447 0.022 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_115 0.02 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_133 0.079 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_148 0.139 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_170 0.113 SeedPlants Compare
Solanum lycopersicum HCCA Cluster_237 0.015 SeedPlants Compare
Vitis vinifera HCCA Cluster_39 0.027 SeedPlants Compare
Vitis vinifera HCCA Cluster_61 0.046 SeedPlants Compare
Vitis vinifera HCCA Cluster_93 0.014 SeedPlants Compare
Vitis vinifera HCCA Cluster_168 0.019 SeedPlants Compare
Vitis vinifera HCCA Cluster_179 0.206 SeedPlants Compare
Vitis vinifera HCCA Cluster_241 0.021 SeedPlants Compare
Zea mays HCCA Cluster_14 0.059 SeedPlants Compare
Zea mays HCCA Cluster_49 0.038 SeedPlants Compare
Zea mays HCCA Cluster_226 0.025 SeedPlants Compare
Zea mays HCCA Cluster_320 0.096 SeedPlants Compare
Zea mays HCCA Cluster_367 0.07 SeedPlants Compare
Sequences (55) (download table)

InterPro Domains

GO Terms

Family Terms