Coexpression cluster: Cluster_259 (HCCA cluster)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043228 non-membrane-bounded organelle 22.0% (11/50) 4.51 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 22.0% (11/50) 4.51 0.0 0.0
GO:0005840 ribosome 22.0% (11/50) 4.64 0.0 0.0
GO:1990904 ribonucleoprotein complex 22.0% (11/50) 4.41 0.0 0.0
GO:0043043 peptide biosynthetic process 20.0% (10/50) 4.44 0.0 0.0
GO:0003735 structural constituent of ribosome 20.0% (10/50) 4.46 0.0 0.0
GO:0006412 translation 20.0% (10/50) 4.48 0.0 0.0
GO:0006518 peptide metabolic process 20.0% (10/50) 4.37 0.0 0.0
GO:0044444 cytoplasmic part 24.0% (12/50) 3.81 0.0 0.0
GO:0043604 amide biosynthetic process 20.0% (10/50) 4.37 0.0 0.0
GO:0005198 structural molecule activity 20.0% (10/50) 4.34 0.0 0.0
GO:0043603 cellular amide metabolic process 20.0% (10/50) 4.29 0.0 0.0
GO:0034645 cellular macromolecule biosynthetic process 22.0% (11/50) 3.97 0.0 0.0
GO:0009059 macromolecule biosynthetic process 22.0% (11/50) 3.84 0.0 0.0
GO:0043226 organelle 24.0% (12/50) 3.56 0.0 0.0
GO:0043229 intracellular organelle 24.0% (12/50) 3.56 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 20.0% (10/50) 3.66 0.0 0.0
GO:0019843 rRNA binding 8.0% (4/50) 7.15 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 20.0% (10/50) 3.47 0.0 0.0
GO:0008097 5S rRNA binding 6.0% (3/50) 8.87 0.0 0.0
GO:0044424 intracellular part 26.0% (13/50) 2.73 0.0 0.0
GO:0044249 cellular biosynthetic process 22.0% (11/50) 3.06 0.0 0.0
GO:0032991 protein-containing complex 22.0% (11/50) 3.04 0.0 0.0
GO:0044464 cell part 26.0% (13/50) 2.63 0.0 1e-06
GO:1901576 organic substance biosynthetic process 22.0% (11/50) 2.97 0.0 1e-06
GO:0034641 cellular nitrogen compound metabolic process 24.0% (12/50) 2.67 0.0 1e-06
GO:0009058 biosynthetic process 22.0% (11/50) 2.83 0.0 2e-06
GO:0005622 intracellular 12.0% (6/50) 4.29 1e-06 3e-06
GO:0044267 cellular protein metabolic process 22.0% (11/50) 2.24 1.5e-05 7.6e-05
GO:0044260 cellular macromolecule metabolic process 24.0% (12/50) 1.91 5.5e-05 0.000271
GO:0003723 RNA binding 10.0% (5/50) 3.53 7.2e-05 0.000342
GO:0019538 protein metabolic process 22.0% (11/50) 1.87 0.000155 0.000713
GO:0043170 macromolecule metabolic process 26.0% (13/50) 1.63 0.000185 0.0008
GO:0005575 cellular_component 26.0% (13/50) 1.63 0.000185 0.0008
GO:0006807 nitrogen compound metabolic process 26.0% (13/50) 1.49 0.000478 0.002006
GO:0044237 cellular metabolic process 26.0% (13/50) 1.48 0.000528 0.002157
GO:1901564 organonitrogen compound metabolic process 22.0% (11/50) 1.61 0.000742 0.002948
GO:0003676 nucleic acid binding 18.0% (9/50) 1.84 0.000779 0.003013
GO:0044429 mitochondrial part 4.0% (2/50) 4.8 0.002373 0.008946
GO:0005761 mitochondrial ribosome 2.0% (1/50) 8.61 0.002562 0.009187
GO:0000313 organellar ribosome 2.0% (1/50) 8.61 0.002562 0.009187
GO:0044238 primary metabolic process 26.0% (13/50) 1.22 0.002736 0.009577
GO:0009987 cellular process 26.0% (13/50) 1.2 0.003069 0.010492
GO:0030515 snoRNA binding 2.0% (1/50) 8.02 0.003841 0.012833
GO:0071704 organic substance metabolic process 26.0% (13/50) 1.16 0.003993 0.013043
GO:0005759 mitochondrial matrix 2.0% (1/50) 6.8 0.008941 0.028571
GO:0006310 DNA recombination 2.0% (1/50) 6.61 0.010211 0.031938
GO:0031974 membrane-enclosed lumen 2.0% (1/50) 6.44 0.011481 0.033753
GO:0043233 organelle lumen 2.0% (1/50) 6.44 0.011481 0.033753
GO:0070013 intracellular organelle lumen 2.0% (1/50) 6.44 0.011481 0.033753
GO:0003697 single-stranded DNA binding 2.0% (1/50) 6.02 0.015279 0.044039
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_56 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_85 0.062 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_113 0.019 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_117 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.037 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_146 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_152 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_163 0.033 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_173 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.093 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.044 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_202 0.014 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.026 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_211 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_245 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_256 0.022 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_43 0.053 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_8 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_27 0.049 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_35 0.024 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_98 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_124 0.03 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.032 Gene family Compare
Oryza sativa HCCA cluster Cluster_81 0.081 Gene family Compare
Oryza sativa HCCA cluster Cluster_119 0.031 Gene family Compare
Oryza sativa HCCA cluster Cluster_167 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_170 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_182 0.019 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.045 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.052 Gene family Compare
Oryza sativa HCCA cluster Cluster_263 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_264 0.014 Gene family Compare
Oryza sativa HCCA cluster Cluster_276 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_63 0.028 Gene family Compare
Picea abies HCCA cluster Cluster_64 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_93 0.028 Gene family Compare
Picea abies HCCA cluster Cluster_115 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_164 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_239 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_276 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_318 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_353 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_407 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_432 0.032 Gene family Compare
Picea abies HCCA cluster Cluster_441 0.02 Gene family Compare
Picea abies HCCA cluster Cluster_475 0.021 Gene family Compare
Picea abies HCCA cluster Cluster_713 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_885 0.02 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_10 0.017 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_21 0.014 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_67 0.019 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_109 0.032 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_14 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_16 0.053 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_100 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_211 0.016 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_240 0.031 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_254 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.049 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_312 0.017 Gene family Compare
Vitis vinifera HCCA cluster Cluster_39 0.045 Gene family Compare
Vitis vinifera HCCA cluster Cluster_47 0.038 Gene family Compare
Vitis vinifera HCCA cluster Cluster_61 0.022 Gene family Compare
Vitis vinifera HCCA cluster Cluster_77 0.031 Gene family Compare
Vitis vinifera HCCA cluster Cluster_85 0.042 Gene family Compare
Vitis vinifera HCCA cluster Cluster_155 0.037 Gene family Compare
Vitis vinifera HCCA cluster Cluster_207 0.019 Gene family Compare
Vitis vinifera HCCA cluster Cluster_231 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_53 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_54 0.076 Gene family Compare
Zea mays HCCA cluster Cluster_162 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_209 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.017 Gene family Compare
Zea mays HCCA cluster Cluster_238 0.014 Gene family Compare
Zea mays HCCA cluster Cluster_274 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_294 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_345 0.024 Gene family Compare
Sequences (50) (download table)

InterPro Domains

GO Terms

Family Terms