Coexpression cluster: Cluster_149 (HCCA cluster)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009451 RNA modification 3.28% (2/61) 4.71 0.002658 0.032661
GO:0016435 rRNA (guanine) methyltransferase activity 1.64% (1/61) 8.75 0.002315 0.033187
GO:0070476 rRNA (guanine-N7)-methylation 1.64% (1/61) 8.75 0.002315 0.033187
GO:0070475 rRNA base methylation 1.64% (1/61) 8.75 0.002315 0.033187
GO:0036265 RNA (guanine-N7)-methylation 1.64% (1/61) 8.75 0.002315 0.033187
GO:0031361 integral component of thylakoid membrane 1.64% (1/61) 8.75 0.002315 0.033187
GO:0000154 rRNA modification 1.64% (1/61) 8.75 0.002315 0.033187
GO:0031167 rRNA methylation 1.64% (1/61) 8.75 0.002315 0.033187
GO:0031360 intrinsic component of thylakoid membrane 1.64% (1/61) 8.75 0.002315 0.033187
GO:0034641 cellular nitrogen compound metabolic process 11.48% (7/61) 1.9 0.00261 0.034529
GO:0090304 nucleic acid metabolic process 8.2% (5/61) 2.34 0.003056 0.035041
GO:0030490 maturation of SSU-rRNA 1.64% (1/61) 7.75 0.004625 0.039779
GO:0030515 snoRNA binding 1.64% (1/61) 7.75 0.004625 0.039779
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 1.64% (1/61) 7.75 0.004625 0.039779
GO:0140102 catalytic activity, acting on a rRNA 1.64% (1/61) 7.75 0.004625 0.039779
GO:0008649 rRNA methyltransferase activity 1.64% (1/61) 7.75 0.004625 0.039779
GO:0006364 rRNA processing 3.28% (2/61) 5.58 0.000788 0.045164
GO:0016072 rRNA metabolic process 3.28% (2/61) 5.58 0.000788 0.045164
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Arabidopsis thaliana HCCA cluster Cluster_6 0.02 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_15 0.017 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_21 0.018 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_59 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_61 0.063 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_117 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_143 0.042 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_182 0.037 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_187 0.015 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_189 0.029 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_204 0.024 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_236 0.025 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_245 0.016 Gene family Compare
Arabidopsis thaliana HCCA cluster Cluster_249 0.019 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_25 0.016 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_45 0.028 Gene family Compare
Cyanophora paradoxa HCCA cluster Cluster_81 0.014 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_8 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_10 0.032 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_35 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_64 0.019 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_69 0.016 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_128 0.017 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_146 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_152 0.015 Gene family Compare
Chlamydomonas reinhardtii HCCA cluster Cluster_161 0.028 Gene family Compare
Oryza sativa HCCA cluster Cluster_65 0.016 Gene family Compare
Oryza sativa HCCA cluster Cluster_67 0.063 Gene family Compare
Oryza sativa HCCA cluster Cluster_148 0.034 Gene family Compare
Oryza sativa HCCA cluster Cluster_170 0.022 Gene family Compare
Oryza sativa HCCA cluster Cluster_183 0.02 Gene family Compare
Oryza sativa HCCA cluster Cluster_234 0.015 Gene family Compare
Oryza sativa HCCA cluster Cluster_256 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_283 0.018 Gene family Compare
Oryza sativa HCCA cluster Cluster_311 0.03 Gene family Compare
Picea abies HCCA cluster Cluster_68 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_175 0.015 Gene family Compare
Picea abies HCCA cluster Cluster_214 0.016 Gene family Compare
Picea abies HCCA cluster Cluster_222 0.025 Gene family Compare
Picea abies HCCA cluster Cluster_269 0.017 Gene family Compare
Picea abies HCCA cluster Cluster_384 0.018 Gene family Compare
Picea abies HCCA cluster Cluster_432 0.019 Gene family Compare
Picea abies HCCA cluster Cluster_439 0.016 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_10 0.025 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_41 0.024 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_55 0.034 Gene family Compare
Selaginella moellendorfii HCCA cluster Cluster_64 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_14 0.019 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_121 0.041 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_122 0.015 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_152 0.023 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_165 0.029 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_218 0.018 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_229 0.017 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_272 0.026 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_301 0.014 Gene family Compare
Solanum lycopersicum HCCA cluster Cluster_312 0.016 Gene family Compare
Vitis vinifera HCCA cluster Cluster_211 0.018 Gene family Compare
Zea mays HCCA cluster Cluster_1 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_54 0.022 Gene family Compare
Zea mays HCCA cluster Cluster_172 0.046 Gene family Compare
Zea mays HCCA cluster Cluster_173 0.02 Gene family Compare
Zea mays HCCA cluster Cluster_188 0.015 Gene family Compare
Zea mays HCCA cluster Cluster_214 0.028 Gene family Compare
Zea mays HCCA cluster Cluster_221 0.023 Gene family Compare
Zea mays HCCA cluster Cluster_257 0.021 Gene family Compare
Zea mays HCCA cluster Cluster_258 0.019 Gene family Compare
Zea mays HCCA cluster Cluster_307 0.029 Gene family Compare
Zea mays HCCA cluster Cluster_331 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_333 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_341 0.016 Gene family Compare
Zea mays HCCA cluster Cluster_346 0.03 Gene family Compare
Zea mays HCCA cluster Cluster_352 0.019 Gene family Compare
Sequences (61) (download table)

InterPro Domains

GO Terms

Family Terms